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Граф коммитов

2162 Коммитов

Автор SHA1 Сообщение Дата
Ralph Castain
8a79d37ac2 Fix a few bugs in the hwloc integration code. The "set binding policy" macro should flag that the policy was indeed set. Some systems don't report sockets, so the print functions need to check for that condition.
cmr:v1.7

This commit was SVN r28209.
2013-03-25 17:51:45 +00:00
Brian Barrett
bc3ca9e009 Make the linux memory component do the failure path if it was disabled.
This commit was SVN r28206.
2013-03-22 16:56:09 +00:00
Brian Barrett
6c3f986d79 * Fix issue with duplicate symbol for the initialize hook due to it existing in both libmpi and libopen-pal by removing the one for libopen-pal. This won't work if we eventually need registration caching in opal/orte, but I'm hoping that by that point, OFED will have gotten off its butt and properly integrated ummunotify into the verbs layer so that this code can go away.
At the same time, fix a minor issue where the init hook was being called twice, once by the libc malloc and once by our malloc by removing the call from our malloc.

This commit was SVN r28202.
2013-03-21 23:05:54 +00:00
Jeff Squyres
3938b85182 Fix CID 752007: missing break statements.
This commit was SVN r28191.
2013-03-21 11:04:36 +00:00
Ralph Castain
b7f0e46319 Provide a nicer error message when someone gives a bad signal number to opal_signal
cmr:v1.7.1

This commit was SVN r28188.
2013-03-20 15:30:59 +00:00
Jeff Squyres
e5838e6121 Don't mandate PCI support, because this will make builds on platforms
that don't have libpciaccess fail (e.g., OS X, or any machine without
libpciaccess).

This commit was SVN r28181.
2013-03-19 16:20:08 +00:00
Jeff Squyres
7f34dc266b Add missing unlocks. Fixes CID 967022 (which covers the unlock on
line 627; there's probably another CID for the unlock added on line
537).

This commit was SVN r28179.
2013-03-18 23:19:25 +00:00
Jeff Squyres
90802410a8 Update hwloc from 1.5.1 to 1.5.2. Re-enable hwloc PCI support by
default, since it will now use libpciaccess (if available).

This commit was SVN r28178.
2013-03-18 23:02:56 +00:00
Jeff Squyres
f8bbfacf65 Fix CID 967922: minor memory leak possibility.
This commit was SVN r28175.
2013-03-15 17:59:00 +00:00
Brian Barrett
fc2b3b8d46 Ugh. Work around an issue with memory hooks and the change from one big
library to multiple libraries that are implicitly sucked into the executable
as a dependency of libmpi.  The initialize hook isn't visible to libc on some
linux distributions when it's in libopal and libopal isn't explicity linked
into the executable.  The fix is to have a duplicate initialize hook in
libmpi as well as libopal.  *sigh*.

This commit was SVN r28164.
2013-03-11 19:22:24 +00:00
George Bosilca
6a933e7593 Use the libs not some weird path.
This commit was SVN r28139.
2013-02-28 22:34:47 +00:00
Ralph Castain
a4b6fb241f Remove all remaining vestiges of the Windows integration
This commit was SVN r28137.
2013-02-28 17:31:47 +00:00
Ralph Castain
e71b40fdcb If we are redirecting to files, ensure we don't create duplicate file descriptors for output streams going to the same file. If we do, then the output gets completely jumbled - best to avoid that problem.
This commit was SVN r28136.
2013-02-28 17:21:53 +00:00
Ralph Castain
8d2fa3693b First cut at removing the native Windows support. Remove all the Windows-specific components, and the .windows files sprinkled around. Remove the Windows platform files and MTT scripts. Update the NEWS to point Windows users to the cygwin package.
This commit was SVN r28116.
2013-02-26 20:44:56 +00:00
Ralph Castain
9479635e31 Missing include here too...
This commit was SVN r28115.
2013-02-26 20:21:10 +00:00
Ralph Castain
8b8333da3e Add missing include
This commit was SVN r28114.
2013-02-26 19:56:05 +00:00
Ralph Castain
e413596705 Add the loopexit API to the opal_event definitions
This commit was SVN r28113.
2013-02-26 19:27:26 +00:00
Ralph Castain
bd9265c560 Per the meeting on moving the BTLs to OPAL, move the ORTE database "db" framework to OPAL so the relocated BTLs can access it. Because the data is indexed by process, this requires that we define a new "opal_identifier_t" that corresponds to the orte_process_name_t struct. In order to support multiple run-times, this is defined in opal/mca/db/db_types.h as a uint64_t without identifying the meaning of any part of that data.
A few changes were required to support this move:

1. the PMI component used to identify rte-related data (e.g., host name, bind level) and package them as a unit to reduce the number of PMI keys. This code was moved up to the ORTE layer as the OPAL layer has no understanding of these concepts. In addition, the component locally stored data based on process jobid/vpid - this could no longer be supported (see below for the solution).

2. the hash component was updated to use the new opal_identifier_t instead of orte_process_name_t as its index for storing data in the hash tables. Previously, we did a hash on the vpid and stored the data in a 32-bit hash table. In the revised system, we don't see a separate "vpid" field - we only have a 64-bit opaque value. The orte_process_name_t hash turned out to do nothing useful, so we now store the data in a 64-bit hash table. Preliminary tests didn't show any identifiable change in behavior or performance, but we'll have to see if a move back to the 32-bit table is required at some later time.

3. the db framework was a "select one" system. However, since the PMI component could no longer use its internal storage system, the framework has now been changed to a "select many" mode of operation. This allows the hash component to handle all internal storage, while the PMI component only handles pushing/pulling things from the PMI system. This was something we had planned for some time - when fetching data, we first check internal storage to see if we already have it, and then automatically go to the global system to look for it if we don't. Accordingly, the framework was provided with a custom query function used during "select" that lets you seperately specify the "store" and "fetch" ordering.

4. the ORTE grpcomm and ess/pmi components, and the nidmap code,  were updated to work with the new db framework and to specify internal/global storage options.

No changes were made to the MPI layer, except for modifying the ORTE component of the OMPI/rte framework to support the new db framework.

This commit was SVN r28112.
2013-02-26 17:50:04 +00:00
Brian Barrett
7c3e42a689 Work around issue shown in #3505 by not linking against libpci by default.
This commit was SVN r28076.
2013-02-19 16:19:33 +00:00
Jeff Squyres
acefc1588e Patch for Cygwin support: Use S_IRWXU for shmget() and include
<sys/stat.h>.  Thanks to Marco Atzeri for reporting the issue and
providing an initial patch.

This commit was SVN r28060.
2013-02-15 14:31:58 +00:00
Ralph Castain
037918e7b4 Correctly parse the rank file slot_list when given "S:C" - the first position holds the socket, so start looking for cores at posn=1
This commit was SVN r28054.
2013-02-13 13:06:03 +00:00
Brian Barrett
504a6d036f * Rather than use the extra_includes directive, add the extra includes (which is really just -I${includedir}/openmpi/ for devel headers) to CPPFLAGS, since all the other necessary -Is for devel headers (like libevent and hwloc) are added to CPPFLAGS.
* Clean up ${includedir} and ${libdir} for script wrapper compilers
* Update script wrapper compilers to work like the C wrapper compilers w.r.t static and dynamic linking
* Remove the ORTE script wrapper compilers since they didn't support the ${includedir} stuff and Ralph said they weren't used anymore.

This commit was SVN r28052.
2013-02-13 00:33:05 +00:00
Joshua Ladd
70ad711337 Backing out the Open SHMEM project
This commit was SVN r28050.
2013-02-12 17:45:27 +00:00
Mike Dubman
ff384daab4 Added new project: oshmem.
This commit was SVN r28048.
2013-02-12 15:33:21 +00:00
Brian Barrett
33cb4d21fe Need to include libltdl's includes so that the lt wrappers can compile
This commit was SVN r28042.
2013-02-12 00:41:03 +00:00
Rolf vandeVaart
6843f02b37 Add wrapper functions to LTDL functions so other parts of the library can access the LTDL functionality.
Reviewed by jsquyres. 

This commit was SVN r28041.
2013-02-11 15:11:47 +00:00
Eugene Loh
3d44f97572 Fix hwloc get-cpubind routine for Solaris. FIRST, check
processor_bind to see if we're bound to a single core.
If not, THEN check lgroup affinity.  Already CMR'ed to
v1.6 (trac 3507) and fixed upstream in hwloc (r5295).

This commit was SVN r28040.

The following SVN revision numbers were found above:
  r5295 --> open-mpi/ompi@6df8cb0f02
2013-02-10 04:02:19 +00:00
Brian Barrett
57b21014f8 Fix issue where the static inline part of the declaration would be improperly
set when using C++

This commit was SVN r28034.
2013-02-05 18:15:32 +00:00
Ralph Castain
6dd4a8cdf9 The opal_list_t destructor doesn't release the items on the list prior to destructing or releasing it. Provide two convenience macros for doing so.
This commit was SVN r28029.
2013-02-04 19:42:57 +00:00
Rolf vandeVaart
82fb093955 Revert changeset 28011. This can break the build on some systems.
This commit was SVN r28017.
2013-02-01 20:41:47 +00:00
Rolf vandeVaart
79b623d7e3 Add wrapper interface to LTDL functions so that other parts of the library can access the LTDL functionality.
Reviewed by jsquyres.

This commit was SVN r28011.
2013-02-01 14:11:39 +00:00
Nathan Hjelm
05a8958bb0 shmem_RUNTIME_QUERY_hint is not really read_only as it is set from the environment not the default value
This commit was SVN r28005.
2013-01-31 23:41:00 +00:00
Rolf vandeVaart
3d1f9d3b29 Fix bug introduced by changeset 27986.
This commit was SVN r27999.
2013-01-31 20:36:02 +00:00
Rolf vandeVaart
729caaf0cd Remove any dependency on libcuda.so in opal layer. All changes are within OMPI_CUDA_SUPPORT code.
This commit was SVN r27986.
2013-01-30 23:07:32 +00:00
Nathan Hjelm
4bfb701115 add iterator macros for opal_list_t
This commit was SVN r27985.
2013-01-30 19:02:55 +00:00
Rolf vandeVaart
94a78dda0d Fix previous checkin. Need to fall through to get initialized variable set.
This commit was SVN r27977.
2013-01-30 00:01:42 +00:00
Brian Barrett
29aaa21c5a Fix some warnings when we don't have sockets or syslog
This commit was SVN r27973.
2013-01-29 23:02:26 +00:00
Rolf vandeVaart
aa04de4f1e Add run-time parameter to enable and disable CUDA GPU support.
This commit was SVN r27970.
2013-01-29 20:24:04 +00:00
Jeff Squyres
ef8ab5507e Per discussion on the devel list, revert r27882.
Leif would like to revamp the ARM support in a different way, and will
submit a patch to do so in the future.

This commit was SVN r27960.

The following SVN revision numbers were found above:
  r27882 --> open-mpi/ompi@8649b5eece
2013-01-29 14:10:46 +00:00
Brian Barrett
b8442ba505 Revamp the handling of wrapper compiler flags. The user flags, main configure
flags, and mca flags are kept seperate until the very end.  The main configure
wrapper flags should now be modified by using the OPAL_WRAPPER_FLAGS_ADD
macro.  MCA components should either let <framework>_<component>_{LIBS,LDFLAGS}
be copied over OR set <framework>_<component>_WRAPPER_EXTRA_{LIBS,LDFLAGS}.
The situations in which WRAPPER CPPFLAGS can be set by MCA components was
made very small to match the one use case where it makes sense.

This commit was SVN r27950.
2013-01-29 00:00:43 +00:00
Ralph Castain
f6b4db0b79 Fix rank_file operations. We changed the syntax to use semi-colons between multiple slot assignments so that we could use the comma to separate specific cores, but somehow the flex definitions didn't get updated to accept that character. We also incorrectly zero'd the bitmap between slot assignment sections, and so multiple slot assignments only wound up making the last one in the list.
This commit was SVN r27908.
2013-01-25 18:33:25 +00:00
Brian Barrett
cdf0325589 Keep libevent headers from being installed in the wrong place. The top level
Makefile.am gets them installed in the right place already

This commit was SVN r27903.
2013-01-24 22:23:51 +00:00
Ralph Castain
c7fe108601 Cleanup a warning - if we are doing linkall and cannot find either static or dynamic libs, than that is clearly an unrecoverable error. Print a nice message and exit.
This commit was SVN r27895.
2013-01-23 22:16:32 +00:00
Brian Barrett
4f41f5ce5b OPAL_WRAPPER_EXTRA_CPPFLAGS is the wrong variable, want to set
WRAPPER_EXTRA_CPPFLAGS

This commit was SVN r27886.
2013-01-21 23:37:35 +00:00
George Bosilca
8649b5eece The patch from ticket #3469 adapted for the trunk.
This commit was SVN r27882.
2013-01-21 11:45:05 +00:00
George Bosilca
15b18cd2cf Make CMA compile and run.
This commit was SVN r27873.
2013-01-19 14:27:54 +00:00
Rolf vandeVaart
f63c88701f Improve CUDA GPU transfers over openib BTL. Use aynchronous copies.
This is RFC that was submitted in July and December of 2012.

This commit was SVN r27862.
2013-01-17 22:34:43 +00:00
Ralph Castain
92e297d1fa Pack/unpack the disk and net stats so they get passed along
This commit was SVN r27844.
2013-01-16 21:54:48 +00:00
Samuel Gutierrez
cba06776f1 Fix copy and paste error in linux memory component debug output.
This commit was SVN r27842.
2013-01-16 18:27:57 +00:00
Ralph Castain
f29f1b731c Extend the node statistics to include disk and network traffic data.
This commit was SVN r27834.
2013-01-15 22:42:36 +00:00