Setup the event API to support multiple bases in preparation for splitting the OMPI and ORTE events. Holding here pending shared memory resolution.
This commit was SVN r23943.
This is a fairly intrusive change, but outside of the moving of opal/event to opal/mca/event, the only changes involved (a) changing all calls to opal_event functions to reflect the new framework instead, and (b) ensuring that all opal_event_t objects are properly constructed since they are now true opal_objects.
Note: Shiqing has just returned from vacation and has not yet had a chance to complete the Windows integration. Thus, this commit almost certainly breaks Windows support on the trunk. However, I want this to have a chance to soak for as long as possible before I become less available a week from today (going to be at a class for 5 days, and thus will only be sparingly available) so we can find and fix any problems.
Biggest change is moving the libevent code from opal/event to a new opal/mca/event framework. This was done to make it much easier to update libevent in the future. New versions can be inserted as a new component and tested in parallel with the current version until validated, then we can remove the earlier version if we so choose. This is a statically built framework ala installdirs, so only one component will build at a time. There is no selection logic - the sole compiled component simply loads its function pointers into the opal_event struct.
I have gone thru the code base and converted all the libevent calls I could find. However, I cannot compile nor test every environment. It is therefore quite likely that errors remain in the system. Please keep an eye open for two things:
1. compile-time errors: these will be obvious as calls to the old functions (e.g., opal_evtimer_new) must be replaced by the new framework APIs (e.g., opal_event.evtimer_new)
2. run-time errors: these will likely show up as segfaults due to missing constructors on opal_event_t objects. It appears that it became a typical practice for people to "init" an opal_event_t by simply using memset to zero it out. This will no longer work - you must either OBJ_NEW or OBJ_CONSTRUCT an opal_event_t. I tried to catch these cases, but may have missed some. Believe me, you'll know when you hit it.
There is also the issue of the new libevent "no recursion" behavior. As I described on a recent email, we will have to discuss this and figure out what, if anything, we need to do.
This commit was SVN r23925.
I did not want to make this change globally since there could be good reason to keep the check before calling SIGKILL that I am not seeing at the moment.
This commit was SVN r23821.
This merges the branch containing the revamped build system based around converting autogen from a bash script to a Perl program. Jeff has provided emails explaining the features contained in the change.
Please note that configure requirements on components HAVE CHANGED. For example. a configure.params file is no longer required in each component directory. See Jeff's emails for an explanation.
This commit was SVN r23764.
- Add one instance where we do not use a parameter in a function
- Fix a buglet in commit r23689, where the attribute-for-function ptrs
was applied.
This commit was SVN r23690.
The following SVN revision numbers were found above:
r23689 --> open-mpi/ompi@5eb571c458
be tested on function pointers and assigned accordingly,
instead of using the pre-processor in the header files.
A functional change is (re-) specifying __opal_attribute_noreturn__
on orte_errmgr_base_abort(): All modules in the errmgr framework
either use this function, or define their own abort function,
which sets __opal_attribute_noreturn__.
This attributes was taken out with the errmgr overhaul in r22872.
This commit was SVN r23689.
The following SVN revision numbers were found above:
r22872 --> open-mpi/ompi@e4f2d03d28
assigned to function-declarations.
Check this case and mark the currently only case existing in trunk.
Thanks to Paul Hargrove for bringing this up.
Let's test the svn commit msg CMR:v1.5
This commit was SVN r23676.
extravaganza.
= Short version =
This commit does several things, but the short version is that it
re-orients the error message creation of the ODLS default module to
generate error strings in the child process for errors that occur
after the fork but before the exec (such errors are ''usually''
related to paffinity). A show_help string is rendered in the child
and then IPC'ed up to the parent, who displays the string through
normal ORTE show_help aggregation mechanisms. We also broke up the
ginormous paffinity-setting logic into a few separate functions, both
to help us understand the code, and hopefully to ease future
maintenance.
The logic for the ODLS default binding should not have changed -- this
is mainly a code reshuffle and improvement on error reporting.
= Rationale =
The reasoning for this commit is complex. As mentioned above, it's
the first step in some paffinity cleanup. Here's the line of dominoes
that must fall (in this order):
1. Add hwloc paffinity component (already done).
1. While testing hwloc, we discovered that the error reporting from
the ODLS default module was abysmal. So we fixed it.
1. Further, we reorganized the code in the odsl_default_module.c a bit
to help our understanding of it.
1. We also discovered a few bugs in the original ODLS default module
logic that existed before this code shuffle; separate tickets
will be filed to fix them.
1. Next up will be some improvements to paffinity / odls default to
make the act of binding to a core ensure to bind to ''all''
hardware threads contained in that core (similar for sockets:
binding to a socket will bind to ''all'' hardware threads in that
socket).
1. Next will be improvements to paffinity to expose binding to
hardware threads through the paffinity framework API.
1. Finally, we'll expose these binding controls to the user (e.g.,
through mpirun command line arguments, MCA parameters, etc.).
This commit represents the first few bullets; the last 4 bullets are
being worked on right now, but there is no definite timeline for
completion.
= Miscelaneous =
A few points worth mentioning:
* We have tested this new code a bunch; we're pretty sure it behaves
just like the trunk -- but with better / more precise error
reporting. More testing is needed on a wider array of platforms,
however.
* A big comment at the top of odls_default_module.c explains the
(new) general scheme for the error reporting.
* The error reporting in the parent process is now really dumb;
almost all the intelligence about creating error messages is in the
child.
* The show_help file was renamed to be more consistent with other
help files (help-odls-default.txt -> help-orte-odls-default.txt)
* Removed the use of sched_yield() because of recent changes in the
Linux 2.6.3x kernels. We already had an #else clause for
select()'ing for 1us if we didn't have sched_yield() -- that is now
the only code path. This is not a performance-critical section of
the code, so this shouldn't be controversial.
* Replaced the macro-based error reporting with function-based
reporting. It's a bit more bulky, but it helped us understand the
code and saved us multiple times with compile-time parameter
checking, etc.
* Cleaned up the use of several show_help messages to ensure that
they mapped to real messages in help*.txt files.
This commit was SVN r23652.
The composite functionality was becoming difficult to maintain, so we removed it for now which simplifies the framework design considerably.
Since the 'crmig' and 'autor' components were -very- similar to the 'hnp' component, this commit also merges them together. By moving the 'crmig' and 'autor' to a separate file under the 'hnp' component we are able to isolate the C/R logic to a large extent, thus being only minimally hooked into the previous 'hnp' component.
So other than some name changes, the functionality is all still in place. I will update the C/R documentation later this morning.
This commit was SVN r23628.
Here we tried to write out the session directory marker after we sync the directory, which happens early in the case of --stop.
Thanks to Ananda Mudar for noticing the bug.
This commit was SVN r23627.
http://www.open-mpi.org/community/lists/devel/2010/07/8240.php
Documentation:
http://osl.iu.edu/research/ft/
Major Changes:
--------------
* Added C/R-enabled Debugging support.
Enabled with the --enable-crdebug flag. See the following website for more information:
http://osl.iu.edu/research/ft/crdebug/
* Added Stable Storage (SStore) framework for checkpoint storage
* 'central' component does a direct to central storage save
* 'stage' component stages checkpoints to central storage while the application continues execution.
* 'stage' supports offline compression of checkpoints before moving (sstore_stage_compress)
* 'stage' supports local caching of checkpoints to improve automatic recovery (sstore_stage_caching)
* Added Compression (compress) framework to support
* Add two new ErrMgr recovery policies
* {{{crmig}}} C/R Process Migration
* {{{autor}}} C/R Automatic Recovery
* Added the {{{ompi-migrate}}} command line tool to support the {{{crmig}}} ErrMgr component
* Added CR MPI Ext functions (enable them with {{{--enable-mpi-ext=cr}}} configure option)
* {{{OMPI_CR_Checkpoint}}} (Fixes trac:2342)
* {{{OMPI_CR_Restart}}}
* {{{OMPI_CR_Migrate}}} (may need some more work for mapping rules)
* {{{OMPI_CR_INC_register_callback}}} (Fixes trac:2192)
* {{{OMPI_CR_Quiesce_start}}}
* {{{OMPI_CR_Quiesce_checkpoint}}}
* {{{OMPI_CR_Quiesce_end}}}
* {{{OMPI_CR_self_register_checkpoint_callback}}}
* {{{OMPI_CR_self_register_restart_callback}}}
* {{{OMPI_CR_self_register_continue_callback}}}
* The ErrMgr predicted_fault() interface has been changed to take an opal_list_t of ErrMgr defined types. This will allow us to better support a wider range of fault prediction services in the future.
* Add a progress meter to:
* FileM rsh (filem_rsh_process_meter)
* SnapC full (snapc_full_progress_meter)
* SStore stage (sstore_stage_progress_meter)
* Added 2 new command line options to ompi-restart
* --showme : Display the full command line that would have been exec'ed.
* --mpirun_opts : Command line options to pass directly to mpirun. (Fixes trac:2413)
* Deprecated some MCA params:
* crs_base_snapshot_dir deprecated, use sstore_stage_local_snapshot_dir
* snapc_base_global_snapshot_dir deprecated, use sstore_base_global_snapshot_dir
* snapc_base_global_shared deprecated, use sstore_stage_global_is_shared
* snapc_base_store_in_place deprecated, replaced with different components of SStore
* snapc_base_global_snapshot_ref deprecated, use sstore_base_global_snapshot_ref
* snapc_base_establish_global_snapshot_dir deprecated, never well supported
* snapc_full_skip_filem deprecated, use sstore_stage_skip_filem
Minor Changes:
--------------
* Fixes trac:1924 : {{{ompi-restart}}} now recognizes path prefixed checkpoint handles and does the right thing.
* Fixes trac:2097 : {{{ompi-info}}} should now report all available CRS components
* Fixes trac:2161 : Manual checkpoint movement. A user can 'mv' a checkpoint directory from the original location to another and still restart from it.
* Fixes trac:2208 : Honor various TMPDIR varaibles instead of forcing {{{/tmp}}}
* Move {{{ompi_cr_continue_like_restart}}} to {{{orte_cr_continue_like_restart}}} to be more flexible in where this should be set.
* opal_crs_base_metadata_write* functions have been moved to SStore to support a wider range of metadata handling functionality.
* Cleanup the CRS framework and components to work with the SStore framework.
* Cleanup the SnapC framework and components to work with the SStore framework (cleans up these code paths considerably).
* Add 'quiesce' hook to CRCP for a future enhancement.
* We now require a BLCR version that supports {{{cr_request_file()}}} or {{{cr_request_checkpoint()}}} in order to make the code more maintainable. Note that {{{cr_request_file}}} has been deprecated since 0.7.0, so we prefer to use {{{cr_request_checkpoint()}}}.
* Add optional application level INC callbacks (registered through the CR MPI Ext interface).
* Increase the {{{opal_cr_thread_sleep_wait}}} parameter to 1000 microseconds to make the C/R thread less aggressive.
* {{{opal-restart}}} now looks for cache directories before falling back on stable storage when asked.
* {{{opal-restart}}} also support local decompression before restarting
* {{{orte-checkpoint}}} now uses the SStore framework to work with the metadata
* {{{orte-restart}}} now uses the SStore framework to work with the metadata
* Remove the {{{orte-restart}}} preload option. This was removed since the user only needs to select the 'stage' component in order to support this functionality.
* Since the '-am' parameter is saved in the metadata, {{{ompi-restart}}} no longer hard codes {{{-am ft-enable-cr}}}.
* Fix {{{hnp}}} ErrMgr so that if a previous component in the stack has 'fixed' the problem, then it should be skipped.
* Make sure to decrement the number of 'num_local_procs' in the orted when one goes away.
* odls now checks the SStore framework to see if it needs to load any checkpoint files before launching (to support 'stage'). This separates the SStore logic from the --preload-[binary|files] options.
* Add unique IDs to the named pipes established between the orted and the app in SnapC. This is to better support migration and automatic recovery activities.
* Improve the checks for 'already checkpointing' error path.
* A a recovery output timer, to show how long it takes to restart a job
* Do a better job of cleaning up the old session directory on restart.
* Add a local module to the autor and crmig ErrMgr components. These small modules prevent the 'orted' component from attempting a local recovery (Which does not work for MPI apps at the moment)
* Add a fix for bounding the checkpointable region between MPI_Init and MPI_Finalize.
This commit was SVN r23587.
The following Trac tickets were found above:
Ticket 1924 --> https://svn.open-mpi.org/trac/ompi/ticket/1924
Ticket 2097 --> https://svn.open-mpi.org/trac/ompi/ticket/2097
Ticket 2161 --> https://svn.open-mpi.org/trac/ompi/ticket/2161
Ticket 2192 --> https://svn.open-mpi.org/trac/ompi/ticket/2192
Ticket 2208 --> https://svn.open-mpi.org/trac/ompi/ticket/2208
Ticket 2342 --> https://svn.open-mpi.org/trac/ompi/ticket/2342
Ticket 2413 --> https://svn.open-mpi.org/trac/ompi/ticket/2413
orte_local_chip_type and orte_local_chip_model in MPI processes it the
appropriate sysinfo module found the values on the machine.
This commit was SVN r23581.
Without this we get errors like the following since the nidmap is empty in the apps:
[[13094,1],1] ORTE_ERROR_LOG: Not found in file ess_env_module.c at line 234
[[13094,1],1] ORTE_ERROR_LOG: Not found in file ess_env_module.c at line 281
This commit was SVN r23536.
* Fix a configure warning for checking --enable-ft-thread
* In hnp and orted ErrMgr components check to see if other components have already recovered this process before trying to recover it again.
* Fix 'npernode' for restarting using the resilient rmaps component
* export ompi_info_set, so that internal functionality can use it.
This commit was SVN r23535.
Create an ability to store the contact info for multiple HNPs being used to route between different job families. Modify the dpm orte module to pass the resulting store during the connect_accept procedure so that all jobs involved in the resulting communicator know how to route OOB messages between them.
Add a test provided by Philippe that tests this ability.
This commit was SVN r23438.
The problem was tracked to use of the grpcomm.onesided_barrier to control daemon/mpirun termination. This relied on messaging -and- required that the program counter jump from the errmgr back to grpcomm. On rare occasions, this jump did not occur, causing mpirun to hang.
This patch looks more invasive than it is - most of the affected files simply had one or two lines removed. The essence of the change is:
* pulled the job_complete and quit routines out of orterun and orted_main and put them in a common place
* modified the errmgr to directly call the new routines when termination is detected
* removed the grpcomm.onesided_barrier and its associated RML tag
* add a new "num_routes" API to the routed framework that reports back the number of dependent routes. When route_lost is called, the daemon's list of "children" is checked and adjusted if that route went to a "leaf" in the routing tree
* use connection termination between daemons to track rollup of the daemon tree. Daemons and HNP now terminate once num_routes returns zero
Also picked up in this commit is the addition of a new bool flag to the app_context struct, and increasing the job_control field from 8 to 16 bits. Both trivial.
This commit was SVN r23429.
Since the MPIR symbols are now included in the ORTE library, remove duplicate declarations in OMPI and replace them with extern references to their ORTE instantiations.
This commit was SVN r23360.
This required modification of the errmgr.update_state API so the pid could be passed in to the function that could update the proper data record(s). All calls to that API have been updated as well, but I obviously couldn't test them all.
Thanks to Dong Ahn (LLNL) for catching this problem!
Also fixed debugger daemon cospawn, both for initial launch and attach-while-running modes. Tested and verified on rsh and slurm.
This commit was SVN r23300.
* Remove OPAL_ERR_PAFFINITY_NOT_SUPPORTED; fit it into the generic
OPAL_ERR_NOT_SUPPORTED case.
* When odls_default detects that processor affinity is not supported,
it prints a specific message about it, and then it suppressed a
generic HNP help message that would normally follow it (i.e., it's
easier to have the "processor affinity is not supported" show_help
message last).
* Use some symbolic names in odls_default instead of fixed int's,
just for slight readability improvements in the code.
* Introduce orte_show_help_suppress(), which gives the ability to
suppress any future showings of any arbitrary show_help() message.
This is useful if you display message X and want to suppress
message Y. This suppression *only* works in environments where
orte_show_help() does coalescing.
This commit was SVN r23249.
* If < 0, it's an OPAL_ERR_* value
* If >= 0, it's the actual output value of the function
This is problematic for the OPAL_SOS stuff. This commit changes those
functions to always return OPAL_* statuses and send the output value
back through output parameters (like 95% of the rest of the code
base). This avoids the confusion with OPAL_SOS stuff and makes
paffinity work again (e.g., mpirun --bind-to-core ...).
I updated all paffinitiy modules for the new function signatures, and
bumped the paffinity API version up to 2.0.1. I don't think the
version change will matter, though, because we'll be introducing
support for hardware threads soon, which will either bump the
paffinity version again or we'll replace paffinity with
a new framework.
This commit was SVN r23197.
* Use OBJ_RELEASE on data that was OBJ_NEW'd
* Limit single-line char width
* Use ORTE_ERR_BAD_PARAM on a rankfile typo, not ORTE_ERR_SILENT
* Add copyright
This commit was SVN r23196.
(OMPI_ERR_* = OPAL_SOS_GET_ERR_CODE(ret)), since the return value could be a
SOS-encoded error. The OPAL_SOS_GET_ERR_CODE() takes in a SOS error and returns
back the native error code.
* Since OPAL_SUCCESS is preserved by SOS, also change all calls of the form
(OPAL_ERROR == ret) to (OPAL_SUCCESS != ret). We thus avoid having to
decode 'ret' to get the native error code.
This commit was SVN r23162.
This component proxies notification messages up to the HNP. This
component runs in both the HNP and non-HNP processes for ease of
selection (e.g., so you can "--mca notifier hnp" (vs. "--mca
notifier hnp,non_hnp"). It auto-detects where it is running and
does the Right Thing -- if it's in the HNP process, it sets up to
receive incoming proxied messages. If it's not in the HNP, then it
proxies all messages to the HNP.
This commit was SVN r23156.
When this component is selected, the notification messages are sent to a file.
The file can be a plain file or stdout or stderr.
The MCA parameter "notifier_file_name" can be used to specify the suffix of the file the notification messages should be sent to.
The default suffix is "wdc" and the file full name is "output-wdc".
This commit was SVN r23155.
Add new mca params to test:
orte_debugger_test_daemon: Name of the executable to be used to simulate a debugger colaunch
orte_debugger_test_attach: Test debugger colaunch after debugger attachment
To test co-launch at job start, just set the orte_debugger_test_daemon param.
To test co-launch upon attach:
set orte_debugger_test_daemon
set orte_debugger_test_attach=1
set orte_enable_debug_cospawn_while_running=1
set orte_debugger_check_rate=<N> - defines the number of seconds to wait before "checking" for a debugger attaching
Added a "debugger" program to orte/test/mpi that just spins to simulate a debugger daemon.
This commit was SVN r23144.
he errmgr framework so that it can decide how to respond - which for now at least is just to check for lifeline and abort if so.
Add a new error constant to indicate that the error is "unrecoverable" so the oob can know it needs to abort.
This commit was SVN r23112.
It is okay to not have a paffinity module IF you aren't using paffinity anyway. So don't error out of MPI_Init because a paffinity module wasn't selected.
Cleanup error reporting in the odls default module to (once and for all!) eliminate messages originating in the fork'd process. Create some new error codes to allow us to pass enough info back to the parent process to provide useful error messages.
This commit was SVN r23106.
Modify the check_complete code so it finds the first non-zero exit status (i.e., the one from the lowest rank) in a job that terminates normally, and sets the mpirun exit code to that status.
This commit was SVN r23071.
1. orte_enable_recovery - default recovery policy, can be overridden on a per-job basis
2. orte_max_local_restarts - default max number of local restarts, can be overridden
3. orte_max_global_restarts - default max number of relocates, can be overridden
Implement the restart_proc API for the ODLS framework, reorganize the default fns a little to avoid copying code.
This commit was SVN r23057.
Note that this isn't a problem since MPI_Abort and orte_abort are only called under controlled circumstances - i.e., we are doing an orderly abort and not segfaulting. If we can't get the message out for some reason, then too bad - we'll still see an abnormal process termination and act accordingly.
This commit was SVN r23045.
1. file activity - can monitor file size, access and modification times. If these fail to change over a specified number of sampling iterations (rate is an mca param), then the errmgr is notified.
2. memory usage - checks amount of memory used by a process. Limit and sampling rate can be set.
This support must be enabled by configuring --enable-sensors.
ompi_info and orte-info have been updated to include the new framework.
Also includes some initial steps toward restoring the recovery capability. Most notably, the ODLS API has been extended to include a "restart_proc" entry for restarting a local process, and organizes the various ERRMGR framework globals into a single struct as we do in the other ORTE frameworks. Fix an oversight in the ERRMGR framework where a pointer array was constructed, but not initialized.
Implementation continues.
This commit was SVN r23043.
* add hnp and orted modules to the errmgr framework. The HNP module contains much of the code that was in the errmgr base since that code could only be executed by the HNP anyway.
* update the odls to report process states directly into the active errmgr module, thus removing the need to send messages looped back into the odls cmd processor. Let the active errmgr module decide what to do at various states.
* remove the code to track application state progress from the plm_base_launch_support.c code. Update the plm modules to call the errmgr directly when a launch fails.
* update the plm_base_receive.c code to call the errmgr with state updates from remote daemons
* update the routed modules to reflect that process state is updated in the errmgr
* ensure that the orted's open the errmgr and select their appropriate module
* add new pretty-print utilities to print process and job state. Move the pretty-print of time info to a globally-accessible place
* define a global orte_comm function to send messages from orted's to the HNP so that others can overlay the standard RML methods, if desired.
* update the orterun help output to reflect that the "term w/o sync" error message can result from three, not two, scenarios
This commit was SVN r23023.
BSD license. Consequently, a more restrictive licensing clause that was
originally associated with the LoadLeveler sample code documentation and
replicated in a comment block in this file has been removed.
This commit was SVN r22947.
Remove the orcm errmgr module - moving to the orcm code base so it can utilize orcm communications and not interfere with ompi-related operations.
This commit was SVN r22931.
1. fix a bug that caused an infinite loop in configure when specifying want-ft but not want-ft-thread by removing a stale reference to the opal-progress-thread option
2. add want-ft=orcm so we can build the orcm errmgr component
3. cleanup the use of "ompi_want_ft_xxx" and replace it with "opal_want_ft_xxx" so that naming conventions are preserved
This commit was SVN r22885.
Update ompi_info and orte-info to include the new framework.
Fix some selection logic and a typo'd variable name
Still remains ompi_ignored until we complete testing
This commit was SVN r22848.
Note that each of these components will only be selected if specifically requested - otherwise, a "NULL" component will be used. The framework is only opened by the HNP and orteds, though neither is currently coded to save/restore state
This commit was SVN r22839.
Aleksej Saushev.
Dont use bash or bashism in shell scripts
We should use Posix' setpgid(0,0), which is equivalent to setpgrp().
This commit was SVN r22829.
Many of the OPAL_ENABLE_FT should be OPAL_ENABLE_FT_CR, so fix those.
The OPAL Layer INC should call opal_output on restart so that it can refresh the string it prints to reflect the current pid/hostname which may have changed.
This commit was SVN r22824.
Cleanup the kill_procs command by removing a no-longer-used param. We update the process state when the proc actually exits.
This commit was SVN r22783.
