If so, then setup the actual launch agent values only when the module init function is called.
This resolves the current conflict between the rsh and rshd components. Hopefully, it may avoid future problems in this area -provided- any new uses of rsh-like launchers abide by the lookup-and-then-setup rule.
This commit was SVN r24550.
No need for any CMRs to 1.5... that was already done in CMR 2728.
This commit was SVN r24545.
The following SVN revision numbers were found above:
r22841 --> open-mpi/ompi@b400b84162
There was no compelling reason to support such old kernels. Accordingly, convert the test to print a nice error message indicating we no longer support old kernels (but indicate that earlier OMPI versions do) and error out. Remove all code that was protected by "if have different pids" since it can no longer be compiled.
This commit was SVN r24531.
For some time, ORTE has had the ability to launch daemons on all nodes prior to launching an application. It has largely been used outside of the OMPI community, and so was never explicitly turned "on" inside OMPI releases. Nevertheless, the code has been there.
Allowing VM launches does not require ANY changes to existing PLM components. All that was required was to have orterun launch the daemons as a separate call to orte_plm.spawn -prior- to launching the applications. The rest of the VM support code resides in the rmaps framework:
(a) a check when asked to map a job to see if it is the daemon job, and
(b) a separate "setup_virtual_machine" mapper in the rmaps base that creates the required map so the PLM's will do the right thing.
In order to support those users who have no RM allocation but like to give the allocation in the form of a -host or -hostfile argument to their application, there is a little more code in orterun and the setup_virtual_machine mapper to capture information passed in that manner.
This has been tested with rsh and slurm environments, and, since there is nothing environment-specific in the implementation, should work in others as well - but needs to be proven.
This commit was SVN r24524.
1. removing the enum of mapper values
2. change the req_mapper and last_mapper fields to char* so they can hold the component name instead of a mapper flag
3. revise the selection logic in the mapper components to reflect the change. Components now look for their name in the req_mapper field, or to see if other criteria (e.g., npernode) are set that mandate their doing the mapping
Several MCA params resided in the rmaps base for historical reasons - they have been in the base since at least the original 1.2 release (and perhaps earlier). However, George correctly pointed out that they really should reside in their respective components. Accordingly, move them to the components, but register synonyms to the old names to avoid breaking backward compatibility.
These revisions retain the current functionality of allowing comm_spawn'd jobs to use different mappers than the original job, and for the errmgr to utilize the resilient mapper to recover processes regardless of how they were originally mapped.
Given the large number of possible combinations, I am sure that someone will find a corner-case combination of values and selection criteria that cause either no mapper to be selected, or one other than the intended to be used. No one can test all the ways people will use this system, so I expect debugging to continue for awhile.
The ability of comm_spawn'd jobs to exploit this functionality relies on changes to the orte_dpm component - this will be committed separately.
This commit was SVN r24520.
OMPI supports multiple different repository systems (SVN, hg, git).
But the VERSION file has listed "want_svn" and "svn_r" as fields, even
though the actual repo system and version may not be SVN.
So search/replace those fields (and derrivative values that come from
those fields) with "want_repo_rev" and "repo_rev", respectively.
This commit was SVN r24405.
When called, each mapper checks to see if it can map the job. If npernode is provided, for example, then the loadbalance mapper accepts the assignment and performs the operation - all mappers before it will "pass" as they can't map npernode requests.
Also remove the stale and never completed topo mapper.
This commit was SVN r24393.
Cleanup the heartbeat handling so it is associated with the proc, not a node.
Cleanup handling of recovery options so that defaults do not override user values iff they are provided.
This commit was SVN r24382.
Add some new proc/job states
Rename a constant to reflect coming change - remove the arbitrary difference between restarting a proc locally and relocating it to another node in terms of the number of restarts allowed.
Add pretty-print of signals for "proc aborted due to signal" reports.
This commit was SVN r24378.
The following SVN revision numbers were found above:
r24371 --> open-mpi/ompi@93d28a5792
This means that the converters (opal_err2str, orte_err2str) can now
return NULL as a "silent error". The return value of opal_err2str_fn_t
is the status of the operation (OPAL_SUCCESS or OPAL_ERROR).
This fixes the "Unknown error" message issues on the trunk.
This commit was SVN r24371.
This will prevent tools from segfaulting if the mpirun process goes away suddenly while they are trying to communicate with it over the OOB.
This commit was SVN r24365.
The problem is that the SStore components were not flushing the old, stale checkpoint information. As a result the checkpoint was writing into the wrong directory, which produced an invalid checkpoint.
This seems to be fixed now. Thanks to Alex Brick for the bug report.
This commit was SVN r24325.
I want to thank Hugo Meyer for reporting this/these bugs.
Notes:
* Moved over a patch from the stabilization branch that makes sure we close the peer socket in the OOB TCP component fully during shutdown (after the de-registration sync). It also ensures that we free the rml_uri only after we are done communicating with the peer (in the odls_base deregister sync operation).
* When an error is detected while delivering messages, we really want to bail out of the loop since the error manager is likely mutating the orte_local_children data structure, so it is no longer safe to iterate over in the orte_odls_base_default_deliver_message() function.
* When the HNP is hosting processes make sure it accounts for processes that may have failed locally in the ErrMgr HNP component by decrementing the num_local_procs. This makes it match the orted ErrMgr component accounting. This is what was causing the modex to fail (the number of participants was wrong on a rolling recovery.
* The crmig and autor features of the hnp ErrMgr component now check for the jobid from both the 'job' parameter and from the process name (since one may be there and not the other). This caused some additional error messages during startup.
* If we fail to migrate (e.g., due to invalid node specification), print only the error message, not the error and success messages. This can be misleading.
This commit was SVN r24317.
* Fix the checkpoint-restart-checkpoint case which would previous reject the checkpoint of the newly restarted process. By making sure to re-enable checkpointing once the application has fully restarted fixes this issue (make sure to set is_app_checkpointable to true on restart confirmation).
* In the case of an invalid checkpoint, do not try to access the SStore datastore as it will be using a dummy handler, and return NULL strings. mpirun was segfaulting in the error case because it was trying to convert the seq_num from a string to an integer.
* Make sure to initialize the timer event in the Automatic Recovery section of the HNP errmgr, per the libevent update. This caused a segfault when attempting to recover a failed process.
* If ompi-checkpoint loses connection to the HNP/mpirun the TCP socket will fail and call the ErrMgr update_state function. This commit adds a dummy function {{{orte_errmgr_base_update_state()}}} that will prevent the ompi-checkpoint command from segfaulting in this error scenario.
This commit was SVN r24306.
* Improve the FTB notifier to publish (C/R, process/communication failure) events to the FTB with the
OMPI jobid as the associated payload.
* Add notifier calls for C/R events and process status events in SnapC and ErrMgr components.
* Fix a bug where the SnapC states and process states collide before being thrown out over the notifier.
This commit was SVN r24251.
Restore the use of override_oversubscribe to indicate that the data source for resources on the backend nodes used in mapping is unreliable. In this situation (e.g., data came from hostfile, or we are just using localhost because nothing was provided), we don't trust the oversubscribe condition passed by the mapper. Instead, we check locally to ensure we set sched_yield correctly.
This commit was SVN r24130.
Point the recv thread event base to the right place so it can wakeup when required.
Add a new error code for "comm disabled" when attempting to communicate after disabling comm.
This commit was SVN r24129.
Note: the ompi_check_libfca.m4 file had to be modified to avoid it stomping on global CPPFLAGS and the like. The file was also relocated to the ompi/config directory as it pertains solely to an ompi-layer component.
Forgive the mid-day configure change, but I know Shiqing is working the windows issues and don't want to cause him unnecessary redo work.
This commit was SVN r23966.
Setup the event API to support multiple bases in preparation for splitting the OMPI and ORTE events. Holding here pending shared memory resolution.
This commit was SVN r23943.
This is a fairly intrusive change, but outside of the moving of opal/event to opal/mca/event, the only changes involved (a) changing all calls to opal_event functions to reflect the new framework instead, and (b) ensuring that all opal_event_t objects are properly constructed since they are now true opal_objects.
Note: Shiqing has just returned from vacation and has not yet had a chance to complete the Windows integration. Thus, this commit almost certainly breaks Windows support on the trunk. However, I want this to have a chance to soak for as long as possible before I become less available a week from today (going to be at a class for 5 days, and thus will only be sparingly available) so we can find and fix any problems.
Biggest change is moving the libevent code from opal/event to a new opal/mca/event framework. This was done to make it much easier to update libevent in the future. New versions can be inserted as a new component and tested in parallel with the current version until validated, then we can remove the earlier version if we so choose. This is a statically built framework ala installdirs, so only one component will build at a time. There is no selection logic - the sole compiled component simply loads its function pointers into the opal_event struct.
I have gone thru the code base and converted all the libevent calls I could find. However, I cannot compile nor test every environment. It is therefore quite likely that errors remain in the system. Please keep an eye open for two things:
1. compile-time errors: these will be obvious as calls to the old functions (e.g., opal_evtimer_new) must be replaced by the new framework APIs (e.g., opal_event.evtimer_new)
2. run-time errors: these will likely show up as segfaults due to missing constructors on opal_event_t objects. It appears that it became a typical practice for people to "init" an opal_event_t by simply using memset to zero it out. This will no longer work - you must either OBJ_NEW or OBJ_CONSTRUCT an opal_event_t. I tried to catch these cases, but may have missed some. Believe me, you'll know when you hit it.
There is also the issue of the new libevent "no recursion" behavior. As I described on a recent email, we will have to discuss this and figure out what, if anything, we need to do.
This commit was SVN r23925.
I did not want to make this change globally since there could be good reason to keep the check before calling SIGKILL that I am not seeing at the moment.
This commit was SVN r23821.
This merges the branch containing the revamped build system based around converting autogen from a bash script to a Perl program. Jeff has provided emails explaining the features contained in the change.
Please note that configure requirements on components HAVE CHANGED. For example. a configure.params file is no longer required in each component directory. See Jeff's emails for an explanation.
This commit was SVN r23764.
- Add one instance where we do not use a parameter in a function
- Fix a buglet in commit r23689, where the attribute-for-function ptrs
was applied.
This commit was SVN r23690.
The following SVN revision numbers were found above:
r23689 --> open-mpi/ompi@5eb571c458
be tested on function pointers and assigned accordingly,
instead of using the pre-processor in the header files.
A functional change is (re-) specifying __opal_attribute_noreturn__
on orte_errmgr_base_abort(): All modules in the errmgr framework
either use this function, or define their own abort function,
which sets __opal_attribute_noreturn__.
This attributes was taken out with the errmgr overhaul in r22872.
This commit was SVN r23689.
The following SVN revision numbers were found above:
r22872 --> open-mpi/ompi@e4f2d03d28
assigned to function-declarations.
Check this case and mark the currently only case existing in trunk.
Thanks to Paul Hargrove for bringing this up.
Let's test the svn commit msg CMR:v1.5
This commit was SVN r23676.
extravaganza.
= Short version =
This commit does several things, but the short version is that it
re-orients the error message creation of the ODLS default module to
generate error strings in the child process for errors that occur
after the fork but before the exec (such errors are ''usually''
related to paffinity). A show_help string is rendered in the child
and then IPC'ed up to the parent, who displays the string through
normal ORTE show_help aggregation mechanisms. We also broke up the
ginormous paffinity-setting logic into a few separate functions, both
to help us understand the code, and hopefully to ease future
maintenance.
The logic for the ODLS default binding should not have changed -- this
is mainly a code reshuffle and improvement on error reporting.
= Rationale =
The reasoning for this commit is complex. As mentioned above, it's
the first step in some paffinity cleanup. Here's the line of dominoes
that must fall (in this order):
1. Add hwloc paffinity component (already done).
1. While testing hwloc, we discovered that the error reporting from
the ODLS default module was abysmal. So we fixed it.
1. Further, we reorganized the code in the odsl_default_module.c a bit
to help our understanding of it.
1. We also discovered a few bugs in the original ODLS default module
logic that existed before this code shuffle; separate tickets
will be filed to fix them.
1. Next up will be some improvements to paffinity / odls default to
make the act of binding to a core ensure to bind to ''all''
hardware threads contained in that core (similar for sockets:
binding to a socket will bind to ''all'' hardware threads in that
socket).
1. Next will be improvements to paffinity to expose binding to
hardware threads through the paffinity framework API.
1. Finally, we'll expose these binding controls to the user (e.g.,
through mpirun command line arguments, MCA parameters, etc.).
This commit represents the first few bullets; the last 4 bullets are
being worked on right now, but there is no definite timeline for
completion.
= Miscelaneous =
A few points worth mentioning:
* We have tested this new code a bunch; we're pretty sure it behaves
just like the trunk -- but with better / more precise error
reporting. More testing is needed on a wider array of platforms,
however.
* A big comment at the top of odls_default_module.c explains the
(new) general scheme for the error reporting.
* The error reporting in the parent process is now really dumb;
almost all the intelligence about creating error messages is in the
child.
* The show_help file was renamed to be more consistent with other
help files (help-odls-default.txt -> help-orte-odls-default.txt)
* Removed the use of sched_yield() because of recent changes in the
Linux 2.6.3x kernels. We already had an #else clause for
select()'ing for 1us if we didn't have sched_yield() -- that is now
the only code path. This is not a performance-critical section of
the code, so this shouldn't be controversial.
* Replaced the macro-based error reporting with function-based
reporting. It's a bit more bulky, but it helped us understand the
code and saved us multiple times with compile-time parameter
checking, etc.
* Cleaned up the use of several show_help messages to ensure that
they mapped to real messages in help*.txt files.
This commit was SVN r23652.
The composite functionality was becoming difficult to maintain, so we removed it for now which simplifies the framework design considerably.
Since the 'crmig' and 'autor' components were -very- similar to the 'hnp' component, this commit also merges them together. By moving the 'crmig' and 'autor' to a separate file under the 'hnp' component we are able to isolate the C/R logic to a large extent, thus being only minimally hooked into the previous 'hnp' component.
So other than some name changes, the functionality is all still in place. I will update the C/R documentation later this morning.
This commit was SVN r23628.
Here we tried to write out the session directory marker after we sync the directory, which happens early in the case of --stop.
Thanks to Ananda Mudar for noticing the bug.
This commit was SVN r23627.
http://www.open-mpi.org/community/lists/devel/2010/07/8240.php
Documentation:
http://osl.iu.edu/research/ft/
Major Changes:
--------------
* Added C/R-enabled Debugging support.
Enabled with the --enable-crdebug flag. See the following website for more information:
http://osl.iu.edu/research/ft/crdebug/
* Added Stable Storage (SStore) framework for checkpoint storage
* 'central' component does a direct to central storage save
* 'stage' component stages checkpoints to central storage while the application continues execution.
* 'stage' supports offline compression of checkpoints before moving (sstore_stage_compress)
* 'stage' supports local caching of checkpoints to improve automatic recovery (sstore_stage_caching)
* Added Compression (compress) framework to support
* Add two new ErrMgr recovery policies
* {{{crmig}}} C/R Process Migration
* {{{autor}}} C/R Automatic Recovery
* Added the {{{ompi-migrate}}} command line tool to support the {{{crmig}}} ErrMgr component
* Added CR MPI Ext functions (enable them with {{{--enable-mpi-ext=cr}}} configure option)
* {{{OMPI_CR_Checkpoint}}} (Fixes trac:2342)
* {{{OMPI_CR_Restart}}}
* {{{OMPI_CR_Migrate}}} (may need some more work for mapping rules)
* {{{OMPI_CR_INC_register_callback}}} (Fixes trac:2192)
* {{{OMPI_CR_Quiesce_start}}}
* {{{OMPI_CR_Quiesce_checkpoint}}}
* {{{OMPI_CR_Quiesce_end}}}
* {{{OMPI_CR_self_register_checkpoint_callback}}}
* {{{OMPI_CR_self_register_restart_callback}}}
* {{{OMPI_CR_self_register_continue_callback}}}
* The ErrMgr predicted_fault() interface has been changed to take an opal_list_t of ErrMgr defined types. This will allow us to better support a wider range of fault prediction services in the future.
* Add a progress meter to:
* FileM rsh (filem_rsh_process_meter)
* SnapC full (snapc_full_progress_meter)
* SStore stage (sstore_stage_progress_meter)
* Added 2 new command line options to ompi-restart
* --showme : Display the full command line that would have been exec'ed.
* --mpirun_opts : Command line options to pass directly to mpirun. (Fixes trac:2413)
* Deprecated some MCA params:
* crs_base_snapshot_dir deprecated, use sstore_stage_local_snapshot_dir
* snapc_base_global_snapshot_dir deprecated, use sstore_base_global_snapshot_dir
* snapc_base_global_shared deprecated, use sstore_stage_global_is_shared
* snapc_base_store_in_place deprecated, replaced with different components of SStore
* snapc_base_global_snapshot_ref deprecated, use sstore_base_global_snapshot_ref
* snapc_base_establish_global_snapshot_dir deprecated, never well supported
* snapc_full_skip_filem deprecated, use sstore_stage_skip_filem
Minor Changes:
--------------
* Fixes trac:1924 : {{{ompi-restart}}} now recognizes path prefixed checkpoint handles and does the right thing.
* Fixes trac:2097 : {{{ompi-info}}} should now report all available CRS components
* Fixes trac:2161 : Manual checkpoint movement. A user can 'mv' a checkpoint directory from the original location to another and still restart from it.
* Fixes trac:2208 : Honor various TMPDIR varaibles instead of forcing {{{/tmp}}}
* Move {{{ompi_cr_continue_like_restart}}} to {{{orte_cr_continue_like_restart}}} to be more flexible in where this should be set.
* opal_crs_base_metadata_write* functions have been moved to SStore to support a wider range of metadata handling functionality.
* Cleanup the CRS framework and components to work with the SStore framework.
* Cleanup the SnapC framework and components to work with the SStore framework (cleans up these code paths considerably).
* Add 'quiesce' hook to CRCP for a future enhancement.
* We now require a BLCR version that supports {{{cr_request_file()}}} or {{{cr_request_checkpoint()}}} in order to make the code more maintainable. Note that {{{cr_request_file}}} has been deprecated since 0.7.0, so we prefer to use {{{cr_request_checkpoint()}}}.
* Add optional application level INC callbacks (registered through the CR MPI Ext interface).
* Increase the {{{opal_cr_thread_sleep_wait}}} parameter to 1000 microseconds to make the C/R thread less aggressive.
* {{{opal-restart}}} now looks for cache directories before falling back on stable storage when asked.
* {{{opal-restart}}} also support local decompression before restarting
* {{{orte-checkpoint}}} now uses the SStore framework to work with the metadata
* {{{orte-restart}}} now uses the SStore framework to work with the metadata
* Remove the {{{orte-restart}}} preload option. This was removed since the user only needs to select the 'stage' component in order to support this functionality.
* Since the '-am' parameter is saved in the metadata, {{{ompi-restart}}} no longer hard codes {{{-am ft-enable-cr}}}.
* Fix {{{hnp}}} ErrMgr so that if a previous component in the stack has 'fixed' the problem, then it should be skipped.
* Make sure to decrement the number of 'num_local_procs' in the orted when one goes away.
* odls now checks the SStore framework to see if it needs to load any checkpoint files before launching (to support 'stage'). This separates the SStore logic from the --preload-[binary|files] options.
* Add unique IDs to the named pipes established between the orted and the app in SnapC. This is to better support migration and automatic recovery activities.
* Improve the checks for 'already checkpointing' error path.
* A a recovery output timer, to show how long it takes to restart a job
* Do a better job of cleaning up the old session directory on restart.
* Add a local module to the autor and crmig ErrMgr components. These small modules prevent the 'orted' component from attempting a local recovery (Which does not work for MPI apps at the moment)
* Add a fix for bounding the checkpointable region between MPI_Init and MPI_Finalize.
This commit was SVN r23587.
The following Trac tickets were found above:
Ticket 1924 --> https://svn.open-mpi.org/trac/ompi/ticket/1924
Ticket 2097 --> https://svn.open-mpi.org/trac/ompi/ticket/2097
Ticket 2161 --> https://svn.open-mpi.org/trac/ompi/ticket/2161
Ticket 2192 --> https://svn.open-mpi.org/trac/ompi/ticket/2192
Ticket 2208 --> https://svn.open-mpi.org/trac/ompi/ticket/2208
Ticket 2342 --> https://svn.open-mpi.org/trac/ompi/ticket/2342
Ticket 2413 --> https://svn.open-mpi.org/trac/ompi/ticket/2413
