ports/openmpi
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Jeff Squyres
5164d89815 Rename "index" parameters to "idx" so that picky compilers shut up 
about "index" shadowing a global symbol name (i.e., the function
index()).  And remove an unused #define.

This commit was SVN r25750.
 2012-01-20 02:06:21 +00:00
Jeff Squyres
1d15d39fb8 Remove the libnuma component; the hwloc maffinity component does everything that this compnent used to do. Good riddance! 
This commit was SVN r25749.
 2012-01-19 23:53:05 +00:00
Jeff Squyres
45636b0558 Make hwloc 1.3.1 the default. Will likel remove 1.2.2ompi shortly. 
This commit was SVN r25748.
 2012-01-19 23:18:40 +00:00
Ralph Castain
d643882f89 Cleanup the alps configure logic so we only add the pmi support libs once 
This commit was SVN r25747.
 2012-01-19 22:10:03 +00:00
Ralph Castain
f5c43e8d60 Get the header files into the tarball 
This commit was SVN r25746.
 2012-01-19 21:02:20 +00:00
Ralph Castain
d7fe1615b6 Add missing dollar sign on variable 
This commit was SVN r25745.
 2012-01-19 20:45:22 +00:00
Ralph Castain
0d20f745e2 Remove stale function def 
This commit was SVN r25744.
 2012-01-19 20:40:48 +00:00
Nathan Hjelm
6d0e7a0a0e don't enable ess/alps unless cnos is available 
This commit was SVN r25743.
 2012-01-19 19:36:00 +00:00
Ralph Castain
7b65af28c6 Correct ordering in MPI_Init so that we do the modex prior to attempting to bind ourselves in the direct launch case as the modex contains info required for self-binding. 
This commit was SVN r25742.
 2012-01-19 18:38:58 +00:00
Ralph Castain
bf09133631 Correctly track the number of debugger daemons being spawned 
This commit was SVN r25741.
 2012-01-19 18:17:07 +00:00
Brian Barrett
b2411fe131 Add support for MPI-3's MPI_COMM_SPLIT_TYPE function 
This commit was SVN r25738.
 2012-01-18 23:35:21 +00:00
Ralph Castain
9d556e2f17 Allow daemons to use PMI to get their name where PMI support is available while using the standard grpcomm and other capabilities. Remove the GNI code from the alps ess component as that component should only be for alps/cnos installations. 
This commit was SVN r25737.
 2012-01-18 20:56:53 +00:00
Ralph Castain
6235a355de Correctly handle co-spawning of daemons when attaching to a running job. We cannot use the general process mappers as we only want debugger daemons spawned on nodes where application procs already exist. So custom build the map for the debugger daemon job, and have the plm just launch that job without doing its usual vm-spawn step. 
This commit was SVN r25736.
 2012-01-18 00:19:49 +00:00
Ralph Castain
11a37d3978 Fix the default 
This commit was SVN r25733.
 2012-01-17 21:09:27 +00:00
Ralph Castain
12d163293b Yeah, I know it's the middle of the afternoon. I'm bound to forget and commit this in with something else if I don't. Per request from LANL, if PMI support is requested on an ALPS machine, add a couple of libs in the right ordering so that static builds will work correctly. 
This commit was SVN r25732.
 2012-01-17 20:41:50 +00:00
Nathan Hjelm
804a494036 zero out ugni fragments in constructor 
This commit was SVN r25731.
 2012-01-17 19:52:26 +00:00
Ralph Castain
fd0d9f73c6 Make preload_binaries an MCA param so it can be set in the default MCA parameters for a system 
This commit was SVN r25728.
 2012-01-17 17:16:05 +00:00
Ralph Castain
16f99507c8 Set ignores 
This commit was SVN r25727.
 2012-01-17 17:15:27 +00:00
Shiqing Fan
9e8c850685 Do not define this if we want Win XP compatible build. 
This commit was SVN r25726.
 2012-01-17 16:43:42 +00:00
Shiqing Fan
f57f873404 Disable the debugger support for Windows. 
This commit was SVN r25725.
 2012-01-17 16:21:33 +00:00
Shiqing Fan
0ecdeff87b Add an option for enabling/disabling the compatible support for windows xp. For example, the InterlockedCompareExchange64 support, which doesn't exist on XP. Enabling this option can make sure that the binary built on a Windows 7/Vista could also be run on Windows XP correctly. 
This commit was SVN r25724.
 2012-01-17 16:12:19 +00:00
Vishwanath Venkatesan
1e95d8b1e2 remove the MPI functions used in these files by the OMPI internal corresponding functionality and also add error checking in these for functions which did not have them' 
This commit was SVN r25723.
 2012-01-13 17:21:51 +00:00
Nathan Hjelm
a2437feba7 removed debug message 
This commit was SVN r25722.
 2012-01-12 20:23:59 +00:00
George Bosilca
d58468f759 Correctly compute the aligned address when packing the 
datatype description. Thanks to Fujitsu for the patch.

This commit was SVN r25721.
 2012-01-12 19:15:22 +00:00
Nathan Hjelm
5ab1674138 fixed de bruijn copyrights 
This commit was SVN r25720.
 2012-01-12 17:18:08 +00:00
Nathan Hjelm
c57f18999d added Debruijn routed component 
This commit was SVN r25717.
 2012-01-12 17:11:03 +00:00
Rolf vandeVaart
16d676aa5b Fix minor issue with CUDA. Cannot register overlappiing regions. 
This commit was SVN r25716.
 2012-01-12 13:00:42 +00:00
Ralph Castain
477582abef Grrrr....fix ALL the cases where the membind warning occurs. 
This commit was SVN r25715.
 2012-01-11 23:51:18 +00:00
Ralph Castain
ce7ddd0e10 Create the debugger attach fifo unless the user requests that we periodically poll insteaad. 
This commit was SVN r25714.
 2012-01-11 19:44:22 +00:00
Ralph Castain
bf103de66c My apologies for doing this outside of the usual time restrictions, but we need to get this in so we can make progress. 
Move the ORTE-level debugger code back into orterun and out of the ORTE library to resolve symbol conflicts.

This commit was SVN r25713.
 2012-01-11 15:53:09 +00:00
Ralph Castain
686ee387c8 Minor platform change 
This commit was SVN r25712.
 2012-01-11 15:51:14 +00:00
Samuel Gutierrez
63869c431b init seg_num_procs_inited to zero before the atomic add. 
This commit was SVN r25710.
 2012-01-11 03:37:23 +00:00
Ralph Castain
167ad944c4 Surprise, surprise - hwloc treats memory binding as at the thread, not process, level. Thus, hwloc always sets the membind proc-level support flag to false, and indicates actual memory binding support via the thread-level flag. So...just to be safe, test -both- flags and issue the "no support" warning ONLY if both are false. 
This commit was SVN r25709.
 2012-01-11 01:12:57 +00:00
Jeff Squyres
1a73ba6ce8 Note the upstream patches that we have in addition to stock hwloc 1.3.1. 
This commit was SVN r25708.
 2012-01-11 00:22:34 +00:00
Jeff Squyres
4243cb7af0 Bring over hwloc r4102 and r4104 for some upstream patches. 
This commit was SVN r25707.

The following SVN revision numbers were found above:
  r4102 --> open-mpi/ompi@8961ca568d

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r4104
 2012-01-11 00:21:47 +00:00
Jeff Squyres
50e5b0937c Add hwloc 1.3.1, but it is not yet the default -- it is currently 
.ompi_ignored to allow other developers to test with it.  It is
expected that we'll remove the .ompi_ignore here soon, and
simultaneously remove the hwloc 1.2.2ompi component.

There was one very minor patch added to stock hwloc 1.3.1 in
hwloc/config/hwloc.m4:

{{{
--- hwloc-1.3.1/config/hwloc.m4	2011-12-14 
+++ ompi3/opal/mca/hwloc/hwloc131/hwloc/config/hwloc.m4
@@ -583,6 +583,7 @@
         ])
     fi
     AC_SUBST(HWLOC_PCI_LIBS)
+    HWLOC_LIBS="$HWLOC_LIBS $HWLOC_PCI_LIBS"
     # If we asked for pci support but couldn't deliver, fail
     AS_IF([test "$enable_pci" = "yes" -a "$hwloc_pci_happy" = "no"],
           [AC_MSG_WARN([Specified --enable-pci switch, but could
	   not])
}}}

This will be pushed upstream to hwloc.

This commit was SVN r25706.
 2012-01-10 23:38:14 +00:00
Nathan Hjelm
96c1df8d90 clean up vader registration code 
This commit was SVN r25704.
 2012-01-10 22:33:22 +00:00
Edgar Gabriel
fb4d1a7099 remove the MPI functions used in this file by the OMPI internal corresponding functionality. 
This commit was SVN r25703.
 2012-01-10 19:55:05 +00:00
Nathan Hjelm
f65f6f5c39 bugfix: ugni: increase smsg mailbox size to a multiple of 4096 
This commit was SVN r25702.
 2012-01-10 19:50:25 +00:00
Shiqing Fan
e3dfc49ced make correct use of the newly updated structures in the Windows module. 
This commit was SVN r25699.
 2012-01-09 11:08:34 +00:00
Mike Dubman
37dc53bbc9 mxm: return the MXM_REQ_SEND_SYNC flag to mxm_req_send 
This commit was SVN r25694.
 2012-01-06 18:56:28 +00:00
Mike Dubman
3b97d609a8 mtl_mxm: fix double free 
This commit was SVN r25693.
 2012-01-06 16:22:58 +00:00
Samuel Gutierrez
d1a44ecd34 send packed buffers instead of using iovecs in common sm rml. this commit will 
hopefully resolve the periodic bus errors that some mtt tests have been
encountering.

This commit was SVN r25692.
 2012-01-05 00:11:59 +00:00
Samuel Gutierrez
b3bfae129b Increase format width in example pi.F to avoid Intel compiler warnings. Thanks to Mark Debbage from QLogic for the patch. 
This commit was SVN r25691.
 2012-01-04 16:44:16 +00:00
Edgar Gabriel
bd65bafc4b next try in committing the README file, hopefully without deleting half of it 
this time.

This commit was SVN r25690.
 2012-01-03 17:58:25 +00:00
Jeff Squyres
7cb96d9acb Restore munged README. 
This commit was SVN r25689.
 2012-01-03 17:25:37 +00:00
Rolf vandeVaart
9441f33981 Improve an error message. Replace tabs with spaces. 
This commit was SVN r25688.
 2012-01-03 15:19:01 +00:00
Shiqing Fan
886edabc12 Add a missing CMake config file into the tarball. 
This commit was SVN r25687.
 2011-12-30 10:44:15 +00:00
Ralph Castain
840841bb8f Missed a couple 
This commit was SVN r25686.
 2011-12-29 23:30:19 +00:00
Ralph Castain
af7fb68cfb If we forward envars in rsh, then we have to be very careful about both duplicate entries and disallowed characters on the cmd line. To aid with detecting duplicates, make all cmd line options be given in their mca variant. Check anything we might add for semi-colons and protect those values with quotes. 
This commit was SVN r25685.
 2011-12-29 23:25:25 +00:00