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713 Коммитов

Автор SHA1 Сообщение Дата
Ralph Castain
8a4565874e Enable ORTE to continue running when a node fails - user takes responsibility for zombies. Minor cleanup to orte-clean
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-27 09:05:26 -07:00
Ralph Castain
f4411c4393 Enable use of OFI fabrics for launch and other collective operations. Update the PMIx repo to the latest master to get the required support for the server to "push" modex info, and to retrieve all its own "modex" values for sending back to mpirun. Have mpirun cache them in its local modex hash as OFI goes point-to-point direct and doesn't route - so the remote daemons don't need a copy of this connection info.
Remove the opal_ignore from the RML/OFI component, but disable that component unless the user specifically requests it via the "rml_ofi_desired=1" MCA param. This will let us test compile in various environments without interfering with operations while we continue to debug

Fix an error when computing the number of infos during server init

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-23 19:57:21 -07:00
Ralph Castain
1f0f03b45b Print a better error message when srun isn't found in the path. Ensure we don't segfault if -host specifies a node not included in the allocation
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-09 07:46:47 -07:00
Ralph Castain
93cf3c7203 Update OPAL and ORTE for thread safety
(I swear, if I look this over one more time, I'll puke)

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-06 12:30:57 -07:00
Ralph Castain
657e701c65 Add debug verbosity to the orte data server and pmix pub/lookup functions
Start updating the various mappers to the new procedure. Remove the stale lama component as it is now very out-of-date. Bring round_robin and PPR online, and modify the mindist component (but cannot test/debug it).

Remove unneeded test

Fix memory corruption by re-initializing variable to NULL in loop

Resolve the race condition identified by @ggouaillardet by resetting the
mapped flag within the same event where it was set. There is no need to
retain the flag beyond that point as it isn't used again.

Add a new job attribute ORTE_JOB_FULLY_DESCRIBED to indicate that all the job information (including locations and binding) is included in the launch message. Thus, the backend daemons do not need to do any map computation for the job. Use this for the seq, rankfile, and mindist mappers until someone decides to update them.

Note that this will maintain functionality, but means that users of those three mappers will see large launch messages and less performant scaling than those using the other mappers.

Have the mindist module add procs to the job's proc array as it is a fully described module

Protect the hnp-not-in-allocation case

Per path suggested by Gilles - protect the HNP node when it gets added in the absence of any other allocation or hostfile

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-05-25 18:41:27 -07:00
Ralph Castain
29e083bffd Fix total_slots_allocated computation
On unmanaged allocations, we need to update the total_slots_allocated once the daemons have been launched and "discovered" their topology

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-05-12 08:21:52 -07:00
Ralph Castain
180809f2ef Do not pass topologies during tree spawn of daemons as there is no way the HNP can know the backend topologies at that point. Any needed topologies will be sent along with the launch_apps command
Do not pass param file MCA params if the user has requested that no param files be read - required when trying to avoid launch time penalties from large numbers of processes reading default param files. The daemon picks them up and passes them along anyway, so it isn't clear what value we gain from having them all read the defaults

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-05-07 21:14:43 -07:00
Ralph Castain
a143800bce Enable full operations under SLURM on Cray systems by co-locating a daemon with mpirun when mpirun is executing on a compute node in that environment. This allows local application procs to inherit their security credential from the daemon as it will have been launched via SLURM
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-05-06 19:08:50 -07:00
Gilles Gouaillardet
57b4144e57 orte: use compression for ORTE_DAEMON_REPORT_TOPOLOGY_CMD answer
Refs open-mpi/ompi#3414

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-04-27 17:21:59 +09:00
Gilles Gouaillardet
49cd40b2df compress the topology sent by the first orted
Refs open-mpi/ompi#3414

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-04-27 16:20:11 +09:00
Ralph Castain
97e38e6d84 Move a free to a little later in case the verbose output needs it
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-04-11 11:21:12 -07:00
Ralph Castain
a29ca2bb0d Enable slurm operations on Cray with constraints
Cleanup some errors in the nidmap code that caused us to send unnecessary topologies

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-04-06 08:58:06 -07:00
Ralph Castain
393c4536eb Remove stale code line
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-04-04 08:13:15 -07:00
Ralph Castain
92c996487c Update how we pass the node regex so we pass _all_ nodes, even those without daemons. This allows the backend daemons to form a complete picture of the allocation. Include info on which nodes have daemons on them, and populate that info on the backend as well.
Set the daemons' state to "running" and mark them as "alive" by default when constructing the nidmap

Get the DVM running again

Fix direct modex by eliminating race condition caused by releasing data while sending it

Up the size limit before compressing

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-04-03 19:25:15 -07:00
Ralph Castain
52c9e631de Silence Coverity warnings
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-03-14 07:30:42 -07:00
Ralph Castain
bb574a41df Update launchers to get correct regex
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-03-13 11:21:44 -07:00
Ralph Castain
105fb152e1 Silence Coverity warnings
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-03-13 08:38:51 -07:00
Ralph Castain
48fc339718 Create an alternative mapping method that pushes responsibility
onto the backend daemons. By default, let mpirun only pack the app_context
info and send that to the backend daemons where the mapping will
be done. This significantly reduces the computational time on mpirun as it isn't
running up/down the topology tree computing thousands of binding
locations, and it reduces the launch message to a very small number of
bytes.

When running -novm, fall back to the old way of doing things
where mpirun computes the entire map and binding, and then sends
the full info to the backend daemon.

Add a new cmd line option/mca param --fwd-mpirun-port that allows
mpirun to dynamically select a port, but then passes that back to
all the other daemons so they will use that port as a static port
for their own wireup. In this mode, we no longer "phone home" directly
to mpirun, but instead use the static port to wireup at daemon
start. We then use the routing tree to rollup the initial
launch report, and limit the number of open sockets on mpirun's node.

Update ras simulator to track the new nidmap code

Cleanup some bugs in the nidmap regex code, and enhance the error message for not enough slots to include the host on which the problem is found.

Update gadget platform file

Initialize the range count when starting a new range

Fix the no-np case in managed allocation

Ensure DVM node usage gets cleaned up after each job

Update scaling.pl script to use --fwd-mpirun-port. Pre-connect the daemon to its parent during launch while we are otherwise waiting for the daemon's children to send their "phone home" rollup messages

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-03-07 20:43:12 -08:00
Jeff Squyres
fec519a793 hwloc: rename opal/mca/hwloc/hwloc.h -> hwloc-internal.h
Per a prior commit, the presence of "hwloc.h" can cause ambiguity when
using --with-hwloc=external (i.e., whether to include
opal/mca/hwloc/hwloc.h or whether to include the system-installed
hwloc.h).

This commit:

1. Renames opal/mca/hwloc/hwloc.h to hwloc-internal.h.
2. Adds opal/mca/hwloc/autogen.options to tell autogen.pl to expect to
   find hwloc-internal.h (instead of hwloc.h) in opal/mca/hwloc.
3. s@opal/mca/hwloc/hwloc.h@opal/mca/hwloc/hwloc-internal.h@g in the
   rest of the code base.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2017-02-28 07:48:42 -08:00
Josh Hursey
a17b547430 Merge pull request #2957 from jjhursey/topic/ibm/rsh-sigint-fix
plm/rsh: Fix signal handling for rsh launcher
2017-02-14 15:29:00 -06:00
Joshua Hursey
843fcca03c plm/rsh: Fix signal handling for rsh launcher
* Similar to the other launchers (i.e., slurm, alps) we need to put the
   children in a separate process group to prevent SIGINT (from a CTRL-C)
   from being delivered to the whole process group and prematurely
   killing the rsh/ssh connections to the remote daemons.

Signed-off-by: Joshua Hursey <jhursey@us.ibm.com>
2017-02-14 08:54:17 -06:00
Ralph Castain
dee2d8646d Fix plm/rsh runtime check
Fix the check for rsh/ssh so we allow the check for SGE and LoadLeveler to occur if user doesn't specify their own launch agent. Fix a Coverity warning

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-02-13 16:54:03 -08:00
Ralph Castain
230d15f0d9 Cleanup the ras simulator capability, and the relay route thru grpcomm
direct. Don't resend wireup info if nothing has changed

Fix release of buffer

Correct the unpacking order

Fix the DVM - now minimized data transfer to it

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-02-01 15:01:58 -08:00
Ralph Castain
b59ae14a2a Fix static port and partial allocation operations
Fix static port wireup by recording the TCP port mpirun is using and correctly passing the regex of hosts to the daemons. Do a better job of closing sockets on failed connection attempts. Correctly identify the remote host in the associated error message.

Fix partial allocation operations by not attempting to set #slots on nodes that were not used, and thus don't have a daemon or topology assigned to them

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-01-28 10:09:44 -08:00
Ralph Castain
c803af5d3d Minor change to allow qrsh to tree spawn, if supported
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-01-27 16:34:08 -08:00
Ralph Castain
7c795f4416 If the HNP is going to request topology info, it cannot do so via a routed OOB message as the intervening daemons may not be ready. So disable routing until the VM is ready, and have daemons start routing as they receive the xcast launch msg (which includes the data they need to talk to their peers).
Do a little optimization and minimize recomputation of the routing plan.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-01-27 15:37:16 -08:00
Ralph Castain
d672fad849 Repair rsh/ssh tree spawn
Repair rsh/ssh tree spawn by unpacking and updating the nidmap in remote_spawn.

Add more specific error messages so the cause of a messaging problem is a little clearer. Remove some stale code. Ensure we stop trying to send a message after a few times.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-01-27 11:35:00 -08:00
Josh Hursey
2e64bf42fb Merge pull request #2810 from jjhursey/fix/ibm/stdiag-to-stdout
Extend options for stddiag routing
2017-01-26 14:29:16 -06:00
Ralph Castain
399de0738e Cleanup launch
Given that we only set OOB contact info from inside of events, or before we begin threaded operations (e.g., in the ess), allow set_contact_info to directly update the oob/base framework globals.

Correct the nidmap regex decompression routine.

Ensure that rank=1 daemon always sends back its topology as this is the most common use-case.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-01-25 22:06:09 -08:00
Ralph Castain
2f4e87eae9 Have rank=1 daemon always send its topology back as this is the most common use-case
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-01-25 09:33:11 -08:00
Jeff Squyres
230bbc597d plm base: make sure to assign "node" early enough
Make sure to assign "node" before using it in ORTE_FLAG_SET.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2017-01-25 08:02:59 -08:00
Joshua Hursey
dcd9801f7c orte/iof: Add orte_map_stddiag_to_stdout option
* Similar to `orte_map_stddiag_to_stderr` except it redirects `stddiag`
   to `stdout` instead of `stderr`.
 * Add protection so that the user canot supply both:
   - `orte_map_stddiag_to_stderr`
   - `orte_map_stddiag_to_stdout`

Signed-off-by: Joshua Hursey <jhursey@us.ibm.com>
2017-01-24 16:22:59 -06:00
Ralph Castain
86ab751c5e Next step in reducing launch time: begin reducing the size of the launch message itself. Start by expressing the daemon map as a set of three regular expression strings. On an 8k cluster, this reduces the nidmap contribution from over 200kBytes to 21 bytes in size.
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-01-23 19:54:47 -08:00
Ralph Castain
368684bd63 Revert e9bc293 and try a different approach for scalably dealing with hetero clusters. Have each orted send back its topo "signature". If mpirun detects that this signature has not been seen before, then ask for that daemon to send back its full topology description. This allows the system to only get the topology once for each unique topo in the cluster.
Cleanup a typo, and remove no longer needed MCA params for hetero nodes and hetero apps. Hetero nodes will always be automatically detected. We don't support a mix of 32 and 64 bit apps

Modify the orte_node_t to use orte_topology_t instead of hwloc_topology_t, updating all the places that use it. Ensure that we properly update topology when we see a different one on a compute node.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-01-18 10:22:15 -08:00
Ralph Castain
e9bc2934be Add an MCA param "hnp_on_smgmt_node" that mpirun can use to tell the orteds to ignore its topology signature as mpirun is executing on a system mgmt node, and hence a different topology than the compute nodes
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-01-16 19:32:01 -08:00
Gilles Gouaillardet
6b9343a966 plm/rsh: plug a memory leak
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-01-06 15:38:45 +09:00
Gilles Gouaillardet
c0c5dd8ccc orte: plug a memory leak in orte_rml.recv_cancel
do not invoke orte_rml.recv_cancel after the orte progress thread has gone

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-01-06 15:38:44 +09:00
Ralph Castain
9eab9a1ed3 Remove stale global variables
Revamp the event notification integration to rely on the PMIx event chaining and remove the duplicate chaining in OPAL. This ensures we get system-level events that target non-default handlers.

Restore the hostname entries for MPI-level error messages, but provide an MCA param (orte_hostname_cutoff) to remove them for large clusters where the memory footprint is problematic. Set the default at 1000 nodes in the job (not the allocation).

Begin first cut at memory profiler

Some minor cleanups of memprobe

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-01-02 14:04:24 -08:00
Ralph Castain
791f4f1ce3 Adjust debug output for clarity
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-12-26 14:04:20 -08:00
Ralph Castain
79cde184ad Allow a PMIx tool to spawn a job
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-12-03 16:00:47 -08:00
Ralph Castain
d5fd635efe Bring forward the debugger-related changes
Refs https://github.com/open-mpi/ompi/pull/2425

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-11-29 13:15:20 -08:00
Howard Pritchard
2cbc0e8472 pmix/cray: fix disable-dlopen problem
PR open-mpi/ompi#2432 introduced a regression where configure
and build with --disable-dlopn caused build failure owing
to unresolved alps lli symbols in the libopal-pal shared library.

This commit fixes this problem.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2016-11-21 13:45:10 -06:00
Ralph Castain
649301a3a2 Revise the routed framework to be multi-select so it can support the new conduit system. Update all calls to rml.send* to the new syntax. Define an orte_mgmt_conduit for admin and IOF messages, and an orte_coll_conduit for all collective operations (e.g., xcast, modex, and barrier).
Still not completely done as we need a better way of tracking the routed module being used down in the OOB - e.g., when a peer drops connection, we want to remove that route from all conduits that (a) use the OOB and (b) are routed, but we don't want to remove it from an OFI conduit.
2016-10-23 21:52:39 -07:00
Gilles Gouaillardet
1846c2d8ad plm/rsh: use an alternate port if the ORTE_NODE_PORT attribute is set 2016-10-19 16:18:52 +09:00
Ralph Castain
de7b1494d9 Clean out old cruft from the ORCM project 2016-09-21 00:13:30 -07:00
Gilles Gouaillardet
c09899f6af plm: plus resource leaks
as reported by Coverity with CIDs 72274 and 1196733
2016-09-07 10:08:44 +09:00
Ralph Castain
4e0788e9ad Enable PSM to support dynamic processes
Fix comm_spawn to correctly reference the actual parent process that requested the spawn when looking for the parent job object
2016-09-02 10:22:04 -07:00
Joshua Hursey
d26dd2c20e orte: Expand the application of !orte_keep_fqdn_hostnames
* Expand the use of the `orte_keep_fqdn_hostnames` MCA parameter when
   it is set to false.
 * If that parameter is set to false (default) then short hostnames
   (e.g., `node01`) will match with the long hostnames (e.g.,
   `node01.mycluster.org`). This allows a user (or resource manager)
    to mix the use of short and long hostnames.
  - Note that this mechanism does _not_ perform a DNS lookup, but
    instead strips off the FQDN by truncating the hostname string at
    the first `.` character (when not an IP address).
     - By default (`false`) the following is true:
       `node01 == node01.mycluster.org == node01.bogus.com`
       since we use `node01` as the hostname.
2016-08-26 16:09:04 -05:00
Jeff Squyres
71ec5cfb43 rsh: robustify the check for plm_rsh_agent default value
Don't strcmp against the default value -- the default value may change
over time.  Instead, check to see if the MCA var source is not
DEFAULT.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2016-08-16 06:58:20 -05:00
Ralph Castain
9f43db7303 Further cleanup getpwuid usage - try it first (unless completely disabled), and then silently failover to try other methods. 2016-08-15 07:51:36 -07:00