flag, new flags to be included when convertor is initialized
- modified pml/btl module defs and added stub functions for diagnostic
output routines to dump state of queues / endpoints
- updates to data reliability pml
This commit was SVN r9329.
checksum. Specify CONVERTOR_WITH_CHECKSUM when the convertor is
created and all the pack/unpack functions attached to this convertor
will be checksum aware.
This commit was SVN r9325.
- Use the datatype-checks of bindings.h within recv.
However, for the time being disable the check for overlapped,
as it is not correctly set.
This commit was SVN r9298.
to let the PML (or io, more generally the low level request manager)
to have it's own release function (what was before the req_fini). This
function will only be called from the low level while the req_free will
be called from the upper level (MPI layer) in order to mark the request
as not used by the user anymore.
From the request point of view the requests will be marked as inactive
everytime we read their status (true for persistent as well). As
MPI_REQUEST_NULL is already marked as inactive, the test and wait functions
are simpler. The drawback is that now we have to change in the
ompi_request_{test|wait} the req_status of the request once we get it's
status.
This commit was SVN r9290.
still need to coordinate some Makefile.am changes with george tomorrow, but
this is the stuff that will require re-autogening
This commit was SVN r9285.
operations. The only item left for this transition is to move the check
for multiply included/excluded processes in group_range_incl/excl to the
MPI layer.
This commit was SVN r9280.
fortran strings to c strings, else the name-publishing and name-lookup
and all subsequent calls (e.g. connect/accept) do not work with fortran.
This commit was SVN r9272.
* Don't do the .in -> .tmp -> header thing for the prefixes and versions.
It causes some severe cleanup issues all to save 4 files from rebuilding
when configure is run.
* Clean up some makefiles so it's clear what is being installed/disted
This commit was SVN r9260.
installation directories) in configure, the files that depend on this
information are not properly rebuilt. If you need this information,
don't setup a -D in the Makefile.am - instead, include
opal/install_dirs.h.
* Use the : option in AC_CONFIG_FILES to avoid needing to expose that
we are playing around with temporary files with our headers to avoid
rebuilding
* Clean up the version file information a bit, and like the install
directory stuff, make sure that there is a dependency so that
ompi_info gets rebuilt properly when a version number changes.
This commit was SVN r9256.
with MPI_WIN_NULL and the Fortran bindings.
It appears I had already done this, since all the infrastructure was already
in place. I probably edited mpi.h instead of mpi.h.in. Sigh.
This commit was SVN r9228.
of the string. Since it is relevant fix, however not affecting any other
part of the source code, should probably still go onto the 1.0 branch.
This commit was SVN r9214.
case still compile properly, even though these bindings were wrong. :-(
- Both interface functions are necessary.
- I accidentally had a subroutine interface named the same thing as the
back-end F77 function -- a definite no-no. Ensure that all F90
interface functions have a suffix to make them different than the
back-end F77 function names.
- Also parameterize the output() subroutine on the type of the argvs
parameter to switch between the character arrays and the integer.
This commit was SVN r9202.
for the C++ bindings in MPI-2 p276-278 to see that MPI_BOOL should
work with MPI_LAND, MPI_LOR, and MPI_LXOR. Thanks to Andy Selle for
pointing this out.
This commit was SVN r9200.
they will match the prototypes in the [styictly-typed] MPI F90
bindings. Specifically, fix up MPI_COMM_SPAWN and
MPI_COMM_SPAWN_MULTIPLE so that the constants MPI_ARGV_NULL,
MPI_ERRCODES_IGNORE, and MPI_ARGVS_NULL can be used in the F90
bindings. Thanks to Michael Kluskens for pointing this out to us.
Some work still remains in the F90 bindings -- we are missing all
places where choice buffers can be of type CHARACTER.
This commit was SVN r9198.
add an explicit test case that checks for them. It is necessary to
put this test function here because the OMPI_IS* macros are only
defined in this directory.
This commit was SVN r9195.
and assert it is below when accessing ompi_ddt_basicDatatypes
- datatype in ompi_ddt_pack_description_length is and will not be
changed.
This commit was SVN r9193.
args from the old data-type. As this args are only read-only, I don't want to have several
copies around, so I add a reference count to them and simply attach them to the new
datatype. The args array now get freed only when the last reference dissapear.
This commit was SVN r9191.
- initial support for gm progress thread
- corrected threading issue in pml
- added polling progress for a configurable number of cycles to wait for threaded case
This commit was SVN r9188.
Buffer first descriptor on the sendreq until postive ACK
Set bytes delivered only after postive ACK, removed num_acks, etc, in general
trying to remove as much state as possible so that rolling things back isn't
such a nightmare
This commit was SVN r9187.
around, since OB1 currently doesn't do the right thing there, but that should
not happen in the near future because the R2 BML should not make any RDMA
networks available between machines with different architectures
* Clean up the #ifs a little bit so that we don't do unneeded work when
on big endian machines and heterogeneous support is disabled...
This commit was SVN r9184.
- moved hton64 and ntoh64 from the bunch of places it had been copied
into one header file
- properly set and use the btl_tcp's nbo option to put things in
network byte order on the wire if both sides don't have the same
endianness
- Put the OB1 PML's headers (with a couple exceptions I need to discuss
with Tim) in network byte order on the wire if both sides don't have
the same endianness
- since it was needed for the TCP BTL, move the orte_process_name_t
HTON and NTOH macros from the TCP OOB to ns_types.h
This commit was SVN r9145.
procs architecture ints to the architecture of the last proc we got
in the list from the gpr, which is probably not what we intended to
do...
This commit was SVN r9144.
working on creating a uniform retransmission mechanism otherwise each type of
send ends up needing a special case for retransmission.
Removed NACK for individual transmissions, we just aggregate these and send
them at the end of a vfrag
This commit was SVN r9141.
you can't be in a post and a start at the same time, and that is clearly
legal to do
* Fix interptretation of when the epochs start for MPI_Fence. Only start
an epoch if communication actually occurs, otherwise it isn't actually
an epoch. I don't know who thought that wording in the MPI standard
was a good idea, but can't change it now...
This commit was SVN r9139.
MPI-2:6.3.4 says about reduction operations
* Have the point-to-point one-sided component spew a warning and return
an error if a non-predefined datatype is used with an MPI_OP other
than MPI_REPLACE. Yes, this violates the MPI standard, but it's the
best we can do until George and I implement support for figuring out
where all the locations to update are..
This commit was SVN r9134.
for a Get request and the reply came in before the local completion
callback was fired from the btl.
* Silence some more debugging output for the moment
This commit was SVN r9130.
when running an MPI job spanning a node that has two TCP NICs and a
node that has one TCP NIC. Previously, for the 2 NIC/module process,
we would return the first peer IP address if we couldn't find a subnet
match with any of the peer's published IP addresses -- this was to
support running OMPI across subnet boundaries. Changed the behavior
to only do that behavior if the IP address we're trying to match is
public (i.e., not 10.x.y.z, 192.168.x.y, or 172.16.x.y) *and* any of
the remote peer's addresses are public (working on the assumption that
if we both have public addresses, they're routable to each other).
This definitely will not work in all scenarios, such as when we go to
WAN kinds of executions, and will need to be revisited at that time.
This commit was SVN r9119.
* fix a silly bug where we weren't adding a long accumulate message to
the pending long messages list, so we hung if a long accumulate
occurred. Still having some memory issues on one of the tests I'm
running - need to move over to Linux and Valgrind after some sleep.
This commit was SVN r9108.
what is going on
* Fix a dumb error where if a lock was released and another was pending, I
would send a lock *request* to the queued process, rather than giving
him the lock and sending him a lock *ack*. Turns out requests and
acks are different things :)
This commit was SVN r9103.
MPI informations stored in args (the MPI_COMBINER stuff). This function
print only one level of information but it expand the name of the
datatype if the data is a predefined one.
This commit was SVN r9090.
Note, the checksums are not enabled currently, setting to zero as the
convertor is not ready for checksums yet.
Also, we can't call unpack/pack on convertor with 0 bytes, otherwise it
crashes.
This commit was SVN r9062.
- Add more checks on the params to ensure that the user conformed to
MPI-2 (i.e., can have MPI_UNDEFINED for p *or* r in the real/complex
functions, but not both)
- Always return MPI_ERR_ARG, not MPI_ERR_OTHER -- seems to make a
little more sense here, since any errors that are returned are
solely because of the arguments that were passed into the function
This commit was SVN r9037.
counterparts, the reset to MPI_REQUEST_NULL of the upper
struct ompi_request_t was broken. Nightly mpi_test_suite
failed, e.g.
mpirun -np 2 ./mpi_test_suite -t "Ring Isend"
This commit was SVN r9028.
The following SVN revision numbers were found above:
r8945 --> open-mpi/ompi@83f83e5730
progress function in the mca_pml to the BML progress one, avoid having a cascade of
call to the progress function and speed up a little bit the execution.
This commit was SVN r9007.
run-time support, as it appears to be doing bad things to memory. Update
the hack to get the local nid to match the recent TCP nal changes, and
update the P3RT api useage
This commit was SVN r9005.
support for Fortran 90 module flags in the wrapper compilers when I
re-wrote them to be less project-specific. Re-add that support and drop
the ugly install in include hack I had done.
This commit was SVN r9003.
data, if the packed data is contiguous and the unpacked one is not. The
problem was that the unpack function did not update the bConverted value
to the real number of bytes extracted from the iovecs, but limit the update
to the number of bytes moved into the user buffers. So, if there were some
bytes copied in the internal pending buffer, they were lost because the next
convertor instead of using the correct bConverted (with the total number of
bytes) has only the transfered number. The result of this bug, is a shift to
left by few bytes of the values in the user buffers.
Add a protection against such kind of errors in the new_position.c.
This commit was SVN r8997.
as needed for the modified source tree layout. Since we don't include
anything but mpi.h in the ROMIO build, we don't need most of the flags
anyway...
This commit was SVN r8995.
changes. The two Big Changes are elegance (much more re-use of code
rather than cut-n-pasting the same code over and over and over and...)
and enabling cross-compilation for F77 and F90 (because we actually
have to *run* some compiled F77 and F90 programs for some of the
tests, which obviously won't work in a cross-compilation environment
-- so enable the use of config.cache to load such values in
cross-compiling environments).
This commit was SVN r8991.
- move files out of toplevel include/ and etc/, moving it into the
sub-projects
- rather than including config headers with <project>/include,
have them as <project>
- require all headers to be included with a project prefix, with
the exception of the config headers ({opal,orte,ompi}_config.h
mpi.h, and mpif.h)
This commit was SVN r8985.
- Start filling in the progress function, focusing on connection establishment.
- Initialize udapl mpool and free lists
- Create/destroy a protection zone with each IA
- Misc organization as I learn how things work
This commit was SVN r8969.
Correct the problem introduced by the commit 8933 (thanks Tim). In order to avoid to much
trafic on the bus we do not compute the bytes_delivered (require an atomic size_t add)
we have to set it in the begining or otherwise we will report the wrong count in the
MPI status.
This commit was SVN r8968.
1. remove all useless macros from the proc header file
2. merge 2 of the match macros (they share the same logic except one list)
This commit was SVN r8946.
of request we are playing with (send or receive). Therefore, it's useless to have another
switch inside this macro and make the code bigger. Now, we have 2 versions
MCA_PML_OB1_SEND_REQUEST_FREE and MCA_PML_OB1_RECV_REQUEST_FREE.
This commit was SVN r8945.
and add a new macro that can be used for both sends and receives.
Move to atomic operations to manage the length of the sended or received
status. There is one instance where the atomic operation is not required
as the code can cannot be executed in same time by 2 differents threads.
This commit was SVN r8933.
* Implement win_lock and win_unlock in the pt2pt component. Not well
tested, but appears to move bits if properly motivated...
This commit was SVN r8922.
* rework the thread locking so that it at least makes sense to me. Still
need to do a bunch of testing before I'm happy with it, but it's a tad
bit closer...
This commit was SVN r8918.
second instance of the ompi_proc from the send and receive request. This
information is already available on the base request, so there is no
need for duplication. The drawback is that now (in order to avoid a
second lookup in the communicator array of procs) we have to set the base
proc in the PML's _ALLOC macro.
This commit was SVN r8900.
It appears that some compilers look in the library paths and others in
the include paths, so just have both available and save ourselves the
trouble.
This commit was SVN r8897.
Granger for bringing this to our attention.
This needs to be modified slightly to go to the v1.0 branch. Will
submit patch via e-mail.
This commit was SVN r8872.
be locally completing. for now using synchronous calls until the new functionality is available. then will change
the code to use the new PML send flags.
This commit was SVN r8867.
* Implement fortran handle -> c handle tracking
* Remove some unneeded locking around free lists (the free list
macros do their own locking)
* Try to be a bit more memory friendly with the w_mode setting /
checking
This commit was SVN r8865.
a subset of win's group, so this should never happen. But users have
been known to screw up before, so return a reasonable error.
This commit was SVN r8855.
some point, I realized having a variable name "new" might cause some
problems for those people using a C++ compiler to compile C code ;).
This commit was SVN r8846.
complete, but stable enough that it will have no impact on general development,
so into the trunk it goes. Changes in this commit include:
- Remove the --with option for disabling MPI-2 onesided support. It
complicated code, and has no real reason for existing
- add a framework osc (OneSided Communication) for encapsulating
all the MPI-2 onesided functionality
- Modify the MPI interface functions for the MPI-2 onesided chapter
to properly call the underlying framework and do the required
error checking
- Created an osc component pt2pt, which is layered over the BML/BTL
for communication (although it also uses the PML for long message
transfers). Currently, all support functions, all communication
functions (Put, Get, Accumulate), and the Fence synchronization
function are implemented. The PWSC active synchronization
functions and Lock/Unlock passive synchronization functions are
still not implemented
This commit was SVN r8836.
It's still not very clean as we still lock the mvapi_btl mutex inside a critical section
protected by the endpoint mutex ...
This commit was SVN r8810.
- Remove printing of CFLAGS in configure.m4
- Set MCA_BTL_FLAGS_SEND flag
- Improved error handling during module initialization
- Extract the address of each interface with dat_ia_query
- Start playing around with fragment stuff - probably wrong
- Misc code cleanup (removal of GM-specific code)
This commit was SVN r8801.
if-clause, getting rid of local schedule variable.
This commit was SVN r8778.
The following SVN revision numbers were found above:
r8771 --> open-mpi/ompi@2fadddebc8
new wrapper compilers for the OMPI layer. This should require no changes
at all for anyone (other than running autogen, of course)
This commit was SVN r8772.
know that the request is inactive we don't have to call fini). Remove if's from
the critical path. Change a do in while to make sure we do the minimum in all cases.
All in all it decrease the latency for mvapi by something between 0.15 and 0.20
micro-seconds. But it's just a first step ...
This commit was SVN r8770.
increased the datatype ref count, and there is no way to have a convertor without a valid
request, so there is no need for the convertor to increase the reference count of the datatype
again. Therefore, if one want to use the datatype for something else than MPI request, one
has to manage the reference counts outside the datatype layer.
This commit was SVN r8769.
thread finish a request between the moment when we check the request status and the moment
when we acquire the lock, and if there are no more pending request on the pipe we will be
stuck foreverr as nobody have any reason to broadcast the request condition. I check the
req_any and it doesn't contain the same bug.
This commit was SVN r8760.
the descriptors to vanish. The PML was thinking that they are in the btl_cache when they
weren't ... It lead to memory consumption on most environments when compiled with
thread enabled. After modification the latency went down by nearly 0.5 microseconds.
Simple way to trigger the bug: limit the number of maximum items in the free list and run
any communication intensive application (like Netpipe).
This commit was SVN r8741.
- Move mca_btl_udapl_error/mca_btl_module_init to mca_btl_udapl.c and rename it
- White space cleanups
- Free the uDAPL evd and ia handles in mca_btl_udapl_finalize
This commit was SVN r8705.
- fall back to compile test for windows paffinity component
when cross compiling
- fall back to platform guess when checking for threads having
different pids with pthreads (yes on linux, no elsewhere)
- pass the proper host, target, and build flags to the
ROMIO configure script
With these changes, cross-compiling should be possible with the exception
of the Fortran 77 and Fortran 90 bindings. Fortran 77 can be cross-
compiled if cache values are provided for type sizes and alignment.
This commit was SVN r8702.
- Borrow configure.m4 from the mvapi btl. One of the uDAPL headers emits a
warning when -pedantic is enabled, so strip it out.
- Change function check in ompi_check_dapl.m4 from dat_ia_open to
dat_registry_list_providers.. dat_ia_open wasn't working right
- Make the references to prepare_dst, put, and get NULL for now
- Add opal_output() calls in all the udapl interface functions for debugging
- Add evd_qlen component parameter to control event dispatcher queue length
- First stab at component_init and module_init
- Misc cleanups - whitespace, dead code removal
- Update copyrights to 2006
This commit was SVN r8701.
r8698), with changes below:
- Split wrapper flags into those required for each of the three projects,
and cleaned up some cruft (including the LIBMPI_EXTRA_*FLAGS) through-
out the build system
- Added opal_init_util and opal_finalize_util to allow init / cleanup
of all the opal code that doesn't require the MCA system
- Create standalone key=value file parser, based on the one that used
to be in the mca param parser, so that it can be shared in multiple
places
- Add wrapper datafiles for opal, orte, and ompi wrappers, and add
wrapper compiler with support for all the old features
This commit was SVN r8699.
The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
r8690
r8698
this was implemented using a chain (tree followed with pipeline) by setting the chain fanout to a factor of size etc but the chain datastructure was fixed in length and if exceeded the topo create returned a null which isn't helpfull in cid next function of comdup...
Anyway two fixes, first we do have a real linear function so changed the decision function and second altered the
topo chain create to force chain fanouts of less than 1 to 1 and fanouts bigger than max to max.
next check in will change chain to dynamically allocd array (reallocable) but we shouldn't ever use a chain fanout for a linear tree anyway.
(lession must rerun all tests for all data sizes when changing decision functions)
This commit was SVN r8662.
As the common part is the one that create the shred memory file it seems
logical to make it destroy the file as well. Therefore, the code for
unmapping the file is in a common place.
This commit was SVN r8622.
On some systems (like windows) qsort can modify the order of modules when the
comparaison function return 0. As we expect to have the
mca_btl_sm_add_procs_same_base_addr called before mca_btl_sm_add_procs we have
force the qsort to return the SM modules in the correct order. Giving to the
same_addr module a slightly higher priority solve this problem.
This commit was SVN r8620.
(windows). Instead use the LN_S variable exported by the Makefile (set to
"ln -s" on all Unixes and to "cp -p" on windows).
When we remove an executable use the correct extension for its name
(add $(EXEEXT) to the name).
This commit was SVN r8616.
implementation was not thread safe). See lengthy comment in
ompi/mpi/cxx/intercepts.cc::ompi_mpi_cxx_op_intercept() for a full
explanation.
This commit was SVN r8606.
(apparently we've been doing this in opal and orte, but not in ompi
yet). All public symbols begin with "ompi_coll_tuned_" (not
mca_coll_tuned_) except the component struct. Now this component
passes the illegal symbol report with no hits.
This commit was SVN r8589.
