ports/openmpi
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Автор SHA1 Сообщение Дата
Edgar Gabriel
c91cb67787 fix a bug in the unnamed semaphore section that was introduced when I tried to unify the named and unnamed semaphore logic. 2015-07-24 10:05:07 -05:00
Howard Pritchard
1631ad7d63 Merge pull request #740 from nrgraham23/environment_java_bindings 
Java Environment Variable Bindings
 2015-07-24 09:04:50 -06:00
Howard Pritchard
5eccba17af lanl: help out lanl admins 
LANL admins want platform files and *.conf
files so oblige them.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
 2015-07-24 08:03:52 -07:00
Edgar Gabriel
57c301f25a remove an erroneous free statement. 2015-07-24 09:44:27 -05:00
Ralph Castain
93f7a51275 Update the orte/system/opal_hotel test 2015-07-24 07:34:59 -07:00
Howard Pritchard
e92c282f78 Merge pull request #741 from hppritcha/topic/failure_to_launch 
plm/alps: fix orted based launch failures.
 2015-07-23 21:13:23 -06:00
Jeff Squyres
d4e665b89e README: fix typo -- should be "PSM2" 2015-07-23 21:13:45 -04:00
Nathaniel Graham
2a156a1c2e Java bindings for window name get and set 
Includes bindings for MPI_WIN_GET_NAME and MPI_WIN_SET_NAME.

Signed-off-by: Nathaniel Graham <ngraham@lanl.gov>
 2015-07-23 18:01:19 -06:00
Howard Pritchard
70096d3753 plm/alps: fix orted based launch failures. 
Turns out that when one builds Open MPI with --disable-dlopen
for Cray, a whole bunch of cray specific libraries get linked
in to the orted executable.  One of these is Cray PMI.  The
Cray PMI has a ctor which, if run, causes job launches using
mpirun to fail.  This commit suppresses the running of the
ctor and thus prevents failure to launch.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
 2015-07-23 15:07:57 -07:00
Nathaniel Graham
a1b47a333a Java Environment Variable Bindings 
Added the bindings for MPI_GET_VERSION and MPI_GET_LIBRARY_VERSION.

Signed-off-by: Nathaniel Graham <ngraham@lanl.gov>
 2015-07-23 14:52:01 -06:00
Rolf vandeVaart
d184f260ad Update extensions section to include cuda 2015-07-23 15:38:44 -04:00
Jeff Squyres
df800286e4 Merge pull request #709 from avilcheslopez/master 
Improving opal_pointer_array bounds checking.
 2015-07-23 14:45:11 -04:00
Alejandro Vilches
994ed60b3d Improving opal_pointer_array bounds checking (using 
OPAL_UNLIKELY).
 2015-07-23 11:53:16 -07:00
Jeff Squyres
3a5537486e NEWS and README: various updates 
- Add the v1.10 NEWS bullets
- Minor updates for PSM/PSM2, MPI extensions
 2015-07-23 14:40:17 -04:00
Rolf vandeVaart
1f32fa21ae Fix arguments to error message, remove tabs and trailing spaces 2015-07-23 10:02:45 -04:00
Jeff Squyres
60609cbb79 orte/test/system: fix compiler warnings 
Note that the opal_hotel test still doesn't compile; it looks like it
needs to be updated to the new requirement to pass an event base.
 2015-07-23 06:19:33 -07:00
Jeff Squyres
ac547126ca openmpi-nightly-tarball.sh: more verbosity, fix coverity 
Add --with-libfabric CLI argument to the coverity build so that usnic
support can be built.
 2015-07-22 21:44:10 -04:00
Jeff Squyres
162da0e98d authors-to-cvsimport.pl: remove stale file 
This script isn't needed any more.
 2015-07-22 21:43:25 -04:00
Rolf vandeVaart
773b509407 Merge pull request #737 from rolfv/pr/add-cuda-war 
Add a workaroud for issue in libcuda.so library
 2015-07-22 16:14:14 -04:00
Howard Pritchard
967907fea4 Merge pull request #731 from nrgraham23/alltoallw_functions 
Alltoallw functions
 2015-07-22 12:21:01 -06:00
Jeff Squyres
f7f1fc9ce2 Merge pull request #736 from nrgraham23/missed_copyrights 
Adding missed copyrights.
 2015-07-22 13:15:27 -04:00
Nathaniel Graham
1197d2a893 Adding missed copyrights. 
I did not add the LANL copyrights to the files I touched
while fixing the javadoc errors.

Signed-off-by: Nathaniel Graham <ngraham@lanl.gov>
 2015-07-22 11:04:41 -06:00
Rolf vandeVaart
7703c96496 Add a workaroud for issue in libcuda.so library 2015-07-22 11:35:27 -04:00
rhc54
d6b7655b91 Merge pull request #730 from rhc54/topic/finalize 
Fix application finalize race condition in RML
 2015-07-22 06:44:14 -07:00
Jeff Squyres
6929aca1b7 topo/basic: also remove .windows from Makefile.am 2015-07-22 09:20:43 -04:00
Jeff Squyres
24ca887bd8 topo/basic: remove stale (empty) .windows file 2015-07-22 09:10:50 -04:00
Jeff Squyres
516b14d623 README: updates for network options 
- Add libfabric options
- Remove sctp options (the SCTP BTL was removed from the tree)
- Put the network options in alphabetical order
 2015-07-22 08:44:12 -04:00
Nathaniel Graham
11e1f09c25 White space fixes 
Signed-off-by: Nathaniel Graham <ngraham@lanl.gov>
 2015-07-21 16:39:59 -06:00
Nathaniel Graham
7548e342dd Java bindings for alltoallw functions. 
Includes bindings for MPI_ALLTOALLW and MPI_IALLTOALLW.

Signed-off-by: Nathaniel Graham <ngraham@lanl.gov>
 2015-07-21 16:29:22 -06:00
Ralph Castain
4853457b93 The RML posted recvs are controlled by the async progress thread when in an application process. The call to finalize and close the RML is done from the main thread, and so we need to shift the actual destruct of the posted recv list to the async thread for handling or else we encounter a race condition when accessing the posted recvs. 
Thanks to Gilles for providing the required debug info
 2015-07-21 08:44:23 -07:00
Jeff Squyres
ec3a38384f Merge pull request #688 from jsquyres/pr/usnic-libfabric-msg-prefix-fix 
usnic fixes for differences between libfabric v1.0.0 and v1.1.0
 2015-07-21 10:18:36 -04:00
Gilles Gouaillardet
46a87cabf0 fix comment in ompi/mpi/c/group_{excl,incl}.c 
no code change
 2015-07-21 10:29:55 +09:00
Edgar Gabriel
b484784dca make ompio return gracefully in case something goes wrong early in file_open. 2015-07-20 10:03:16 -05:00
Edgar Gabriel
86c3000e18 fix the delete selection logic in io/base. With the previous version, there was a mismatch 
in the version number and no component was selected for file_delete.
 2015-07-20 10:01:30 -05:00
Ralph Castain
9140ad4642 Update the PGI issues list 2015-07-17 17:39:43 -07:00
Ralph Castain
67769d4a59 Update search_compare script 2015-07-17 17:36:37 -07:00
Ralph Castain
60cabb07cf Update NEWS for 1.10 2015-07-17 17:36:27 -07:00
Gilles Gouaillardet
bd60ce1655 fortran: add missing non blocking i/o files to Makefile 
fixes open-mpi/ompi@01f752a504
 2015-07-16 11:27:14 +09:00
Howard Pritchard
466c8b0159 Merge pull request #697 from edgargabriel/pr/nb-coll-part2 
pr/nb collective I/O part2
 2015-07-14 14:00:39 -06:00
Edgar Gabriel
e355db005e fix the logic for setting stripe size and stripe count in the lustre fs module. Takes now also the MPI_Info object into consideration. 2015-07-14 10:53:19 -05:00
Gilles Gouaillardet
86c3fa88f7 Merge pull request #718 from ggouaillardet/topic/configury_xrc_4 
Topic/configury xrc 4
 2015-07-13 23:50:02 +09:00
Gilles Gouaillardet
f7cf7d5070 configury: fix XRC detection on OFED < 3.12 
since ibv_create_xrc_rcv_qp is now deprecated, and in order to
be "future-proof", we have to consider the case in which only XRC Domains are supported.
also, correctly handle distro that ship broken ibverbs devel headers

Thanks Paul Hargrove for the detailled report.
 2015-07-13 10:43:22 +09:00
Gilles Gouaillardet
66ef1c3c55 configury: fix fortran binding checks for ompi extensions 2015-07-13 10:17:13 +09:00
rhc54
2e42457c2f Merge pull request #717 from rhc54/topic/async 
Create a new opal_async_event_base and have the pmix/native and ORTE …
 2015-07-12 09:44:34 -07:00
Ralph Castain
219c4dfba5 Create a new opal_async_event_base and have the pmix/native and ORTE level use it. This reduces our thread count by one. 2015-07-12 08:23:34 -07:00
rhc54
bd91225cb5 Merge pull request #716 from rhc54/topic/alloc 
Default allocated nodes to the UP state
 2015-07-11 12:30:32 -07:00
rhc54
d16af830fa Merge pull request #715 from rhc54/topic/evbase 
Rename the current opal_event_base to opal_sync_event_base in prepara…
 2015-07-11 10:50:40 -07:00
Ralph Castain
2c896c5a2d Default allocated nodes to the UP state 2015-07-11 10:43:11 -07:00
Ralph Castain
683efcb850 Rename the current opal_event_base to opal_sync_event_base in preparation for adding an async progress thread to opal. No functional changes made here - just a simple rename. 2015-07-11 10:08:19 -07:00
rhc54
053d9b2a7c Merge pull request #713 from rhc54/topic/errhandler 
Add an opal/errhandler so opal-level errors can be up-leveled
 2015-07-11 07:58:57 -07:00