If defined, use SOURCE_DATE_EPOCH environment variable; make the build
Reproducible by forcing timestamps. See
https://reproducible-builds.org/docs/source-date-epoch/ for more
information.
Thanks Bernhard M. Wiedemann for bringing this to our attention.
Fixesopen-mpi/ompi#3759
**NOTE:** This was cherry-picked from master, and slightly modified /
amended for the v4.1.x branch.
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
Signed-off-by: Bernhard M. Wiedemann <bwiedemann@suse.de>
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
(cherry picked from commit 7b4e8ba4aa)
Among many other things:
- Fix an imbalance bug in MPI_allgather
- Accept more human readable configuration files. We can now specify
the collective by name instead of a magic number, and the component
we want to use also by name.
- Add the capability to have optional arguments in the collective
communication configuration file. Right now the capability exists
for segment lengths, but is yet to be connected with the algorithms.
- Redo the initialization of all HAN collectives.
Cleanup the fallback collective support.
- In case the module is unable to deliver the expected result, it will fallback
executing the collective operation on another collective component. This change
make the support for this fallback simpler to use.
- Implement a fallback allowing a HAN module to remove itself as
potential active collective module, and instead fallback to the
next module in line.
- Completely disable the HAN modules on error. From the moment an error is
encountered they remove themselves from the communicator, and in case some
other modules calls them simply behave as a pass-through.
Communicator: provide ompi_comm_split_with_info to split and provide info at the same time
Add ompi_comm_coll_preference info key to control collective component selection
COLL HAN: use info keys instead of component-level variable to communicate topology level between abstraction layers
- The info value is a comma-separated list of entries, which are chosen with
decreasing priorities. This overrides the priority of the component,
unless the component has disqualified itself.
An entry prefixed with ^ starts the ignore-list. Any entry following this
character will be ingnored during the collective component selection for the
communicator.
Example: "sm,libnbc,^han,adapt" gives sm the highest preference, followed
by libnbc. The components han and adapt are ignored in the selection process.
- Allocate a temporary buffer for all lower-level leaders (length 2 segments)
- Fix the handling of MPI_IN_PLACE for gather and scatter.
COLL HAN: Fix topology handling
- HAN should not rely on node names to determine the ordering of ranks.
Instead, use the node leaders as identifiers and short-cut if the
node-leaders agree that ranks are consecutive. Also, error out if
the rank distribution is imbalanced for now.
Signed-off-by: Xi Luo <xluo12@vols.utk.edu>
Signed-off-by: Joseph Schuchart <schuchart@icl.utk.edu>
Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
Conflicts:
ompi/mca/coll/adapt/coll_adapt_ibcast.c
* first import of Bull specific modifications to HAN
* Cleaning, renaming and compilation fixing Changed all future into han.
* Import BULL specific modifications in coll/tuned and coll/base
* Fixed compilation issues in Han
* Changed han_output to directly point to coll framework output.
* The verbosity MCA parameter was removed as a duplicated of coll verbosity
* Add fallback in han reduce when op cannot commute and ppn are imbalanced
* Added fallback wfor han bcast when nodes do not have the same number of process
* Add fallback in han scatter when ppn are imbalanced
+ fixed missing scatter_fn pointer in the module interface
Signed-off-by: Brelle Emmanuel <emmanuel.brelle@atos.net>
Co-authored-by: a700850 <pierre.lemarinier@atos.net>
Co-authored-by: germainf <florent.germain@atos.net>
a hierarchical, architecture-aware collective communication module.
Add Reduce and remove up_seg_size and low_seg_size in Bcast
Increase HAN's priority
Signed-off-by: Xi Luo <xluo12@vols.utk.edu>
Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
The current iprobe/improbe implementations merely checks the return
code on the posted receive operation to tell if there is a match or
not. This commit moves the check to the probe's error callback
instead. Per the semantics defined in libfabric, the peek operation is
asynchronous and the results are to be fetched from the completion
queue. If no message is found matching the tags specified in the peek
request, then a completion queue error entry with err field set to
FI_ENOMSG will be available.
Signed-off-by: Raghu Raja <craghun@amazon.com>
(cherry picked from commit 39f8a86b65)
In multi-threaded scenarios, any thread that attempts to read a CQ
when there's a pending error CQ entry gets an -FI_EAVAIL. Without
any serialization here (which is okay, since libfabric will protect
access to critical CQ objects), all threads proceed to read from the
error CQ, but only one thread fetches the entry while others get
-FI_EAGAIN indicating an empty queue, which is not erroneous.
Signed-off-by: Raghu Raja <craghun@amazon.com>
(cherry picked from commit 415dddb9af)
Made a couple vars static if they didn't look like they were used
more than one place, and added prefixes to a few.
Signed-off-by: Mark Allen <markalle@us.ibm.com>
(cherry picked from commit 34b42b1b09)
This is a meta commit, that encapsulate all the ADAPT commits in the master
into a single PR for 4.1. The master commits included here are:
fe73586, a4be3bb, d712645, c2970a3, e59bde9, ee592f3 and c98e387.
Here is a detailed list of added capabilities:
* coll/adapt: Fix naming conventions and C11 atomic use
* coll/adapt: Remove unused component field in module
* Consistent handling of zero counts in the MPI API.
* Correctly handle non-blocking collectives tags
* As it is possible to have multiple outstanding non-blocking collectives
provided by different collective modules, we need a consistent
mechanism to allow them to select unique tags for each instance of a
collective.
* Add support for fallback to previous coll module on non-commutative operations (#30)
* Replace mutexes by atomic operations.
* Use the correct nbc request type (for both ibcast and ireduce)
* coll/base: document type casts in ompi_coll_base_retain_*
* add module-wide topology cache
* use standard instead of synchronous send and add mca parameter to control mode of initial send in ireduce/ibcast
* reduce number of memory allocations
* call the default request completion.
* Remove the requests from the Fortran lookup conversion tables before completing
and free it.
* piggybacking Bull functionalities
Signed-off-by: Xi Luo <xluo12@vols.utk.edu>
Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
Signed-off-by: Marc Sergent <marc.sergent@atos.net>
Co-authored-by: Joseph Schuchart <schuchart@hlrs.de>
Co-authored-by: Lemarinier, Pierre <pierre.lemarinier@atos.net>
Co-authored-by: pierrele <31764860+pierrele@users.noreply.github.com>
The gather and scatter operations did not use the correct message size
(Only did datatype size * com size). This did not correctly reflect the
total message size and prevents fine tuning within a com size. This
patch multiplies the value by the number of elements sent.
Signed-off-by: William Zhang <wilzhang@amazon.com>
(cherry picked from commit 50823fe9a9)
Reduce scatter block and reduce scatter algorithms were hitting
correctness issues for non commutative strided tests. We will revert to
the original default algorithms for those two collectives (basic linear
and non overlapping respectively) in the non commutative op case.
See #8010
Signed-off-by: William Zhang <wilzhang@amazon.com>
(cherry picked from commit 57b95bcb45)
the ofi mtl mrecv was not properly setting the message in/out
arg to MPI_MRECV to MPI_MESSAGE_NULL.
Signed-off-by: Howard Pritchard <hppritcha@gmail.com>
(cherry picked from commit e6f81ed6d6)
Alter the test to validate misaligned data.
Fixes#7954.
Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
(cherry picked from commit b6d71aa893)
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
The btl/ofi does not currently utilize the common ofi include/exclude
list. Added verification code similar to the mtl/ofi that will check if
the info object is in the include or exclude list. If it isn't in the
include list or is in the exclude list, validate_info will return
OPAL_ERROR. The btl/ofi will no longer pass a provider name as a hint
when calling getinfo, instead filtering the provider during
validate_info.
This patch also moves the is_in_list MTL function into common code and
adds additional debugging output to the BTL to match the MTL standard.
Signed-off-by: William Zhang <wilzhang@amazon.com>
(cherry picked from commit 9b8f463a76)
The default algorithm selections were out of date and not performing
well. After gathering data from OMPI developers, new default algorithm
decisions were selected for:
allgather
allgatherv
allreduce
alltoall
alltoallv
barrier
bcast
gather
reduce
reduce_scatter_block
reduce_scatter
scatter
These results were gathered using the ompi-collectives-tuning package
and then averaged amongst the results gathered from multiple OMPI
developers on their clusters.
You can access the graphs and averaged data here:
https://drive.google.com/drive/folders/1MV5E9gN-5tootoWoh62aoXmN0jiWiqh3
Signed-off-by: William Zhang <wilzhang@amazon.com>
(cherry picked from commit ce40cfbaa5)
Add logic to handle different architectural capabilities
Detect the compiler flags necessary to build specialized
versions of the MPI_OP. Once the different flavors (AVX512,
AVX2, AVX) are built, detect at runtime which is the best
match with the current processor capabilities.
Add validation checks for loadu 256 and 512 bits.
Add validation tests for MPI_Op.
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
Signed-off-by: dongzhong <zhongdong0321@hotmail.com>
Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
(cherry picked from commit 14b3c70628)
do not check some input parameters when an {in,out}degree is zero
Thanks Junchao Zhang for analyzing and reporting this issue.
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
(cherry picked from commit 5655d64bd3)
ompi_mtl_portals4_get_endpoint() was incorrectly making a direct
call to ompi_mtl_portals4_add_procs(). Instead use the actve PML
to call add_procs(). If add_procs() fails, call ompi_rte_abort()
to terminate the job.
Signed-off-by: Todd Kordenbrock <thkgcode@gmail.com>
(cherry picked from commit 0a637967fa)
1. Remove debug output in iallgather (I have forgotten to remove it).
2. Remove an incorrect comment in description of ibcast
Signed-off-by: Mikhail Kurnosov <mkurnosov@gmail.com>
(cherry picked from commit 64abd0f405)
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
An implementation of R. Rabenseifner's algorithm for MPI_Iallreduce.
This algorithm is a combination of a reduce-scatter implemented with recursive vector halving
and recursive distance doubling, followed either by an allgather.
Limitations:
-- count >= 2^{\floor{\log_2 p}}
-- commutative operations only
-- intra-communicators only
Signed-off-by: Mikhail Kurnosov <mkurnosov@gmail.com>
(cherry picked from commit 73e048b62a)
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
Implements recursive doubling algorithm for MPI_Iallgather.
The algorithm can be used only for power-of-two number of processes.
Signed-off-by: Mikhail Kurnosov <mkurnosov@gmail.com>
(cherry picked from commit a7386c1e09)
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
An implementation of R. Rabenseifner's algorithm for MPI_Ireduce.
This algorithm is a combination of a reduce-scatter implemented with recursive vector halving
and recursive distance doubling, followed either by a gather.
Limitations:
-- count >= 2^{\floor{\log_2 p}}
-- commutative operations only
-- intra-communicators only
Signed-off-by: Mikhail Kurnosov <mkurnosov@gmail.com>
(cherry picked from commit 7bd63e79c8)
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
Remove dead code that was causing warnings about unused static
functions.
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
(cherry picked from commit 2e24e6ec08)
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
Implements recursive doubling algorithm for MPI_Iexscan.
The algorithm preserves order of operations so it can be used both
by commutative and non-commutative operations.
The MCA parameter 'coll_libnbc_iexscan_algorithm' was added for dynamic
algorithm selection.
Signed-off-by: Mikhail Kurnosov <mkurnosov@gmail.com>
(cherry picked from commit dfe203e167)
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
Implements recursive doubling algorithm for MPI_Iscan. The algorithm preserves order of operations so it can be used both by commutative and non-commutative operations.
The MCA parameter coll_libnbc_iscan_algorithm was added for dynamic algorithm selection.
Signed-off-by: Mikhail Kurnosov <mkurnosov@gmail.com>
(cherry picked from commit 3d43ff0f32)
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
