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Jeff Squyres
debe06289c Thanks to Siegmar Gross; he pointed out that I didn't read 
http://docs.oracle.com/javase/tutorial/java/nutsandbolts/datatypes.html
carefully enough: a Java "char" is actually 16 bits, not 8.

This commit was SVN r28087.
 2013-02-21 14:29:18 +00:00
Jeff Squyres
4e2ee5a27b Per 
http://docs.oracle.com/javase/tutorial/java/nutsandbolts/datatypes.html,
the sizes of Java types are fixed.  So we just assign them to their
corresponding MPI fixed-size datatypes where possible.

This commit was SVN r28085.
 2013-02-20 21:57:48 +00:00
Nathan Hjelm
55cf850eca Add comment about r28083 
This commit was SVN r28084.

The following SVN revision numbers were found above:
  r28083 --> open-mpi/ompi@5411e28c00
 2013-02-20 21:42:13 +00:00
Nathan Hjelm
5411e28c00 btl/openib: don't align fragments on 2 byte boundaries (changed to 8) 
cmr:v1.6,v1.7

This commit was SVN r28083.
 2013-02-20 21:27:01 +00:00
Brian Barrett
7c3e42a689 Work around issue shown in #3505 by not linking against libpci by default. 
This commit was SVN r28076.
 2013-02-19 16:19:33 +00:00
Rolf vandeVaart
da3e9ff906 Add show_help.h where needed. 
This commit was SVN r28071.
 2013-02-19 15:42:09 +00:00
Brian Barrett
3c83618799 fix a missing header file issue with IB 
This commit was SVN r28070.
 2013-02-18 18:29:14 +00:00
Vasily Filipov
52a9241859 MTL MXM: adapt to mxm 2.0 api changes - flags are only for send requests, and SYNC is part of the opcode. 
This commit was SVN r28069.
 2013-02-17 10:04:19 +00:00
Vasily Filipov
8270d8f52a MTL MXM: "#include "opal/util/show_help.h" adding. 
This commit was SVN r28068.
 2013-02-17 09:51:03 +00:00
Jeff Squyres
12e047e594 Update documentation for rankfiles in orterun.1: 
* Add a little more description of what rankfiles are
 * Update that we use logical numbering for socket:core notation
 * Mention +nX notation

This commit was SVN r28067.
 2013-02-16 17:52:30 +00:00
Ralph Castain
ebad55b933 Apply patches from ORNL to fix compile issues - minor stuff. Thanks to Geoffroy Vallee for the patches. 
This commit was SVN r28065.
 2013-02-15 22:14:23 +00:00
Ralph Castain
c0b670bea8 I guess some profiling tools and debuggers require that the argv[0] of each rank be unique so they can create a filename based on that value. For those obscure cases, provide an mpirun cmd line option that indexes each argv[0] by rank 
This commit was SVN r28064.
 2013-02-15 20:20:49 +00:00
Jeff Squyres
acefc1588e Patch for Cygwin support: Use S_IRWXU for shmget() and include 
<sys/stat.h>.  Thanks to Marco Atzeri for reporting the issue and
providing an initial patch.

This commit was SVN r28060.
 2013-02-15 14:31:58 +00:00
Jeff Squyres
fde6207fe1 Patch for Cygwin support: use correct DSO/shared library prefix and 
suffix.  Thanks to Marco Atzeri for reporting the issue and providing
an initial patch.

This commit was SVN r28059.
 2013-02-15 14:12:39 +00:00
Ralph Castain
b9897267ef Cleanup report-bindings so it always reports the actual binding instead of what was requested. Ensure we don't report twice if it is an MPI process being launched. 
This commit was SVN r28057.
 2013-02-14 17:24:28 +00:00
Jeff Squyres
bbddd6ea03 Add header file for opal_show_help(). 
This commit was SVN r28056.
 2013-02-13 16:31:59 +00:00
Ralph Castain
037918e7b4 Correctly parse the rank file slot_list when given "S:C" - the first position holds the socket, so start looking for cores at posn=1 
This commit was SVN r28054.
 2013-02-13 13:06:03 +00:00
Ralph Castain
744ed49b2d Begin cleanup of the thread_lock calls in ORTE. We'll ignore the ones in the rml/oob for now as that code block is being rewritten anyway. 
This commit was SVN r28053.
 2013-02-13 01:53:12 +00:00
Brian Barrett
504a6d036f * Rather than use the extra_includes directive, add the extra includes (which is really just -I${includedir}/openmpi/ for devel headers) to CPPFLAGS, since all the other necessary -Is for devel headers (like libevent and hwloc) are added to CPPFLAGS. 
* Clean up ${includedir} and ${libdir} for script wrapper compilers
* Update script wrapper compilers to work like the C wrapper compilers w.r.t static and dynamic linking
* Remove the ORTE script wrapper compilers since they didn't support the ${includedir} stuff and Ralph said they weren't used anymore.

This commit was SVN r28052.
 2013-02-13 00:33:05 +00:00
Brian Barrett
312f37706e In talking about this with Jeff and Ralph, we don't actually need 
ompi_show_help, because opal_show_help is replaced with an 
aggregating version when using ORTE, so there's no reason to
directly call orte_show_help.

This commit was SVN r28051.
 2013-02-12 21:10:11 +00:00
Joshua Ladd
70ad711337 Backing out the Open SHMEM project 
This commit was SVN r28050.
 2013-02-12 17:45:27 +00:00
Mike Dubman
ff384daab4 Added new project: oshmem. 
This commit was SVN r28048.
 2013-02-12 15:33:21 +00:00
Jeff Squyres
f922fcea08 Due to this thread: 
http://www.open-mpi.org/community/lists/users/2013/02/21356.php and a
helpful tip from Dave Goodell, set the precious variables for
compilers to "no" that we don't want.  Libtool's m4 configry will
interpret this as "I won't be using this language; don't bother
setting it up."

This commit was SVN r28047.
 2013-02-12 15:24:40 +00:00
Jeff Squyres
32bc1a7622 Update svn:ignore 
This commit was SVN r28046.
 2013-02-12 15:23:43 +00:00
Jeff Squyres
5e30979e17 Update svn:ignore 
This commit was SVN r28045.
 2013-02-12 15:09:52 +00:00
Mike Dubman
55cb00f8a3 Remove references to unexisting files: 
ompi/mca/common/netpatterns/
    ompi/mca/common/commpatterns/

This commit was SVN r28044.
 2013-02-12 13:21:47 +00:00
Brian Barrett
33cb4d21fe Need to include libltdl's includes so that the lt wrappers can compile 
This commit was SVN r28042.
 2013-02-12 00:41:03 +00:00
Rolf vandeVaart
6843f02b37 Add wrapper functions to LTDL functions so other parts of the library can access the LTDL functionality. 
Reviewed by jsquyres. 

This commit was SVN r28041.
 2013-02-11 15:11:47 +00:00
Eugene Loh
3d44f97572 Fix hwloc get-cpubind routine for Solaris. FIRST, check 
processor_bind to see if we're bound to a single core.
If not, THEN check lgroup affinity.  Already CMR'ed to
v1.6 (trac 3507) and fixed upstream in hwloc (r5295).

This commit was SVN r28040.

The following SVN revision numbers were found above:
  r5295 --> open-mpi/ompi@6df8cb0f02
 2013-02-10 04:02:19 +00:00
Jeff Squyres
6f257c477f Fix typo in Makefile.am. 
This commit was SVN r28037.
 2013-02-07 13:41:39 +00:00
Nathan Hjelm
ab57e2ef38 update lustre configuration to use OMPI_CHECK_PACKAGE and only check for liblustreapi (not liblustre) 
This commit was SVN r28036.
 2013-02-06 17:22:58 +00:00
Pavel Shamis
a31bc57849 Moving mca/common/netpatterns and commpaterns to ompi/patterns. 
This commit was SVN r28035.
 2013-02-05 21:52:55 +00:00
Brian Barrett
57b21014f8 Fix issue where the static inline part of the declaration would be improperly 
set when using C++

This commit was SVN r28034.
 2013-02-05 18:15:32 +00:00
Brian Barrett
d80218996f Rather than setting up the direct call stuff in ompi_mca (which requires 
modifying ompi_mca for every interface that is direct called), do it in
the framework's .m4 file.

This commit was SVN r28031.
 2013-02-04 23:26:42 +00:00
Ralph Castain
6dd4a8cdf9 The opal_list_t destructor doesn't release the items on the list prior to destructing or releasing it. Provide two convenience macros for doing so. 
This commit was SVN r28029.
 2013-02-04 19:42:57 +00:00
Vasily Filipov
21b170b43b MTL MXM: push commit r27987 back, now with right user. 
r27987 - MTL MXM: ver. 2.0 interface changes.

This commit was SVN r28026.

The following SVN revision numbers were found above:
  r27987 --> open-mpi/ompi@2735658d81
 2013-02-04 06:59:24 +00:00
Vasily Filipov
aa5e436479 Revert revesion -r27986, the reason is - it was submitted with wrong user name. 
This commit was SVN r28025.

The following SVN revision numbers were found above:
  r27986 --> open-mpi/ompi@729caaf0cd
 2013-02-04 06:54:24 +00:00
Jeff Squyres
c8dc1905f0 Fixes trac:3494: If we get 0 bytes back for the ACK, it doesn't 
necessarily mean an error -- it could (and usually does) mean that the
peer realized that we both initiated a connect at the same time, and
therefore it decided to hang up.

I also added a friendly show_help error message for other cases where
recv_blocking() fails (i.e., "Something went wrong. Kaboom! Your job
will abort...").

This commit was SVN r28023.

The following Trac tickets were found above:
  Ticket 3494 --> https://svn.open-mpi.org/trac/ompi/ticket/3494
 2013-02-02 01:19:03 +00:00
Jeff Squyres
4aacf90009 Sync with v1.6 NEWS 
This commit was SVN r28021.
 2013-02-01 21:55:43 +00:00
Rolf vandeVaart
82fb093955 Revert changeset 28011. This can break the build on some systems. 
This commit was SVN r28017.
 2013-02-01 20:41:47 +00:00
Jeff Squyres
f05b7aa6d8 As the help message states, it's not an ''error'' if the specified 
interface is not found.  It should just be skipped.

This commit was SVN r28016.
 2013-02-01 20:17:43 +00:00
Matthias Jurenz
a73f6d0254 Changes to OTF: 
- corrected initial library version

This commit was SVN r28015.
 2013-02-01 14:27:37 +00:00
Ralph Castain
b360156a37 Extend print coverage to all types 
This commit was SVN r28012.
 2013-02-01 14:21:06 +00:00
Rolf vandeVaart
79b623d7e3 Add wrapper interface to LTDL functions so that other parts of the library can access the LTDL functionality. 
Reviewed by jsquyres.

This commit was SVN r28011.
 2013-02-01 14:11:39 +00:00
Matthias Jurenz
06d922005d Changes to OTF: 
- revised fix for OpenType Font conflicts based upon Jeff's comments in CMR #3497)
	- renamed libotf to libopen-trace-format
	- install libraries to LIBDIR (as before, no need for adjusting LD_LIBRARY_PATH)

This commit was SVN r28010.
 2013-02-01 13:22:13 +00:00
Ralph Castain
afb0db5b6f Okay, Jeff - just for you...flow the show help thru the orte functions so help messages will be aggregated 
This commit was SVN r28007.
 2013-02-01 00:35:48 +00:00
Nathan Hjelm
c28879137d set $1_LIBS correctly on all calls to ORTE_CHECK_ALPS not just the first call 
This commit was SVN r28006.
 2013-01-31 23:42:28 +00:00
Nathan Hjelm
05a8958bb0 shmem_RUNTIME_QUERY_hint is not really read_only as it is set from the environment not the default value 
This commit was SVN r28005.
 2013-01-31 23:41:00 +00:00
Ralph Castain
e6555408f4 When we say abort, we mean ABORT!! Actually implement the ompi_rte_abort and ompi_rte_show_help functions in the ORTE module. 
This commit was SVN r28004.
 2013-01-31 23:12:11 +00:00
Jeff Squyres
1b7f4da503 Sync NEWS with v1.6 branch 
This commit was SVN r28003.
 2013-01-31 21:22:46 +00:00