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Автор SHA1 Сообщение Дата
Jeff Squyres
6d0465971e An obvious optimization. :-)
This commit was SVN r23183.
2010-05-20 00:41:36 +00:00
Jeff Squyres
5eff7ae63b AC_USE_SYSTEM_EXTENSIONS will modify CFLAGS if nothing was in there
beforehand.  We don't want that.  So if there was nothing in
CFLAGS, put nothing back in there.

This commit was SVN r23182.
2010-05-20 00:25:23 +00:00
Jeff Squyres
3129ccd9ec Make the hwloc paffinity component available for everyone. hwloc
supports a wide variety of operating systems and platforms; see the
opal/mca/paffinity/hwloc/hwloc/README file for details.

This component includes an embedded copy of hwloc, currently based on
hwloc-1.0rc6.  But note that hwloc is properly SVN imported into the
/vendor branch, so it will be easy to update when 1.0 GA is released.
Note that the hwloc tree embedded in opal/mca/paffinity/hwloc/hwloc is
identical to a hwloc distribution tarball, except that much of the
documentation was rm -rf'ed (because we don't need it for the embedded
case).

Since the paffinity framework currently does not understand hardware
threads, the hwloc component compensates for this by identifying cores
by the "first" hardware thread on that core.  Hopefully we'll update
paffinity someday to understand hardware threads.  :-)

configure grew a --with-hwloc option, analogous to what we do for many
other external libraries that OMPI supports.  However, there's a new
feature: due to the request of several distros, OMPI can be configured
to build with its internal copy of hwloc or with an external copy of
hwloc (e.g., a system-installed hwloc).

 1. If --with-hwloc is not specified, Open MPI will try to use its
    internal copy (but silently fail/ignore hwloc if that fails).
 1. If --with-hwloc=<dir> is supplied, Open MPI looks for hwloc
    support in <dir> (and --with-hwloc-libdir=<dir>, if specified).
 1. If --with-hwloc=external is supplied, Open MPI will look for hwloc
    in a compiler/linker default external location.
 1. If --with-hwloc=internal is supplied, Open MPI will use its
    internal copy of hwloc.

Some of OMPI's main configury had to be slightly re-arranged in the
bootstrapping phase to accomodate hwloc's configry needs.

This commit was SVN r23125.
2010-05-13 23:56:05 +00:00
Ralph Castain
b400b84162 Merge in the modified thread configure option branch per today's telecon.
Remove the --enable-progress-threads option as this is no longer functional, and hardcode OPAL_ENABLE_PROGRESS_THREADS to 0.

Replace the --enable-mpi-threads option with --enable-mpi-thread-multiple as this is clearer as to meaning. This option automatically turns "on" opal thread support if it wasn't already so specified. If the user specifies --disable-opal-multi-threads --enable-mpi-thread-multiple, we will error out with a message

Add a new --enable-opal-multi-threads option that turns "on" opal thread support without doing anything wrt mpi-thread-multiple

This commit was SVN r22841.
2010-03-16 23:10:50 +00:00
Ralph Castain
ffd5be6aa1 Add a new framework to ORTE for saving and recovering state information. Two components are included that use the db or dbm library for storing the data, with a distributed hash table component coming later.
Note that each of these components will only be selected if specifically requested - otherwise, a "NULL" component will be used.  The framework is only opened by the HNP and orteds, though neither is currently coded to save/restore state

This commit was SVN r22839.
2010-03-16 20:59:48 +00:00
Shiqing Fan
08ffdbe987 Changes for portable platform headers. Commit it on behalf of Ralph.
This commit was SVN r22619.
2010-02-15 22:14:59 +00:00
Rainer Keller
ea4de16561 - Check whether file is opened on network file-system.
If file does not exist, check the directory it lives in...
   Maybe used by caller, trying to open mmap() on NFS, Lustre or
   Panasas (thanks Sam).
   For now, this is used to warn about the usage of mmap on such FS.

   Please note, that Ralph mentioned the orte_no_session_dir parameter.
   The help message includes a reference to this.

   Tested on NFS and Lustre on Linux on
     smoky: mpirun --mca orte_tmpdir_base $HOME/tmp -np 2 ./mpi_stub
     jaguar: mpirun ... --mca orte_tmpdir_base /tmp/work/$USER ...

   Fixes trac:1354

   This should   cmr:v1.5   once it has soaked and is shown to work on
   Solaris

This commit was SVN r22604.

The following Trac tickets were found above:
  Ticket 1354 --> https://svn.open-mpi.org/trac/ompi/ticket/1354
2010-02-10 23:18:29 +00:00
Brian Barrett
1ac217621c Fix CPPFLAGS issues with wrapper compilers. CPPFLAGS should be set for all
projects and don't push CPPFLAGS into WRAPPER_FLAGS (for now, removes 
-D_REENTRANT).

refs trac:2201

This commit was SVN r22535.

The following Trac tickets were found above:
  Ticket 2201 --> https://svn.open-mpi.org/trac/ompi/ticket/2201
2010-02-03 04:28:32 +00:00
Rainer Keller
e90163778a - Do an actual sh-test.
cmr:v1.5:#2197

This commit was SVN r22534.
2010-02-02 23:44:49 +00:00
Rainer Keller
9efd8cfedc - This bites us with make check (read MTT) on static builds (read jaguar)
Only test using dlopen, when we do have it...

   cmr:v1.5

This commit was SVN r22483.
2010-01-25 23:41:59 +00:00
Matthias Jurenz
60ad7dca5b Moved tests for the visibility feature after the tests for contributed software, because VampirTrace does not support this right now.
This commit was SVN r22441.
2010-01-18 13:30:56 +00:00
Ralph Castain
fad1ba15b0 Move the test for case-sensitive file system from ompi to opal so that all layers can have that knowledge.
Use that for the orte wrapper compilers

This commit was SVN r22348.
2009-12-29 23:26:45 +00:00
Jeff Squyres
e8b4507c51 Add the possibility for 3rd party projects to drop in .m4 files that AC_DEFUN ompi_CONFIG_LOCAL, orte_CONFIG_LOCAL, and/or opal_CONFIG_LOCAL in any of the <project>/config directories. If these macros are defined in <project>/config/<foo>.m4 files, autogen.sh will pick up their definitions and the top-level configure script will invoke them. This allows 3rd parties to add more configury to Open MPI (or ORTE or OPAL) without needing to patch configure.
This commit was SVN r22326.
2009-12-16 23:32:47 +00:00
Jeff Squyres
ab00aea1ff Per http://www.open-mpi.org/community/lists/devel/2009/10/7025.php,
use the new Automake "silent rules" if available.

If you are using an Automake prior to v1.11, you won't see the new 
silent rules -- it will automatically default back to the "verbose" 
rules.

Note, too, that even with these changes, you can enable the verbose 
"make all" output in one of two ways:

1. Add "V=1" to your "make" command line

{{{
shell$ make all V=1
}}}

2. Add "--disable-silent-rules" to your "configure" command line:

{{{
shell$ ./configure --disable-silent-rules ...
}}}

The one down side of using the silent rules by default is that we'll 
get less diagnostic information when users send their build logs.  I 
think we should update the web page to request that users send build 
logs of "make V=1", but I'm guessing that not everyone will do it.

Note that I did ''not'' silent-ize the libltdl build (which is a dozen
or so files in the beginning of the build) because we wholly import
libltdl at autogen time.  I therefore didn't want to patch libltdl
(further) after importing it a) to remain as forward- compatible as
possible, and b) patching the imported libltdl build system might be
tricky in terms of timestamps / dependencies.  So those dozen-or-so
files will still be "verbose", but the rest of the files in OMPI will
be "silent".

This commit was SVN r22189.
2009-11-04 02:07:02 +00:00
Jeff Squyres
ba46010a56 Fix the nightly build.
This commit was SVN r22166.
2009-10-29 01:54:11 +00:00
Jeff Squyres
a6c1fe888f We also need .so versioning of the OMPI "common" components since they
are installed as standalone libraries in $libdir.

This commit was SVN r22148.
2009-10-27 20:58:34 +00:00
Ralph Castain
13d86e100b Courtesy of Ralph and Jeff:
Continue the reorganization of the configure system. Move files from the main config directory to their appropriate level-specific config directories. Modify the configure system to correctly handle compiler detection, test, and setup so that all things pertaining to opal and orte are done at the lower level, with the ompi configure system only looking at mpi-specific options.

Ensure the wrapper compilers for orte and ompi only get built when appropriate. Add support for c++ to the orte wrapper compilers, both script and non-script versions.

This commit was SVN r22138.
2009-10-24 01:04:35 +00:00
Jeff Squyres
02db4f5146 Terry pointed out that ORTE also needs the "totalview" flags, and
therefore the m4 test really belongs on orte/config.  Thank Terry!

Additionally, I took the opprotunity to rename the variable so that
"TOTALVIEW" is not in the name anymore (because it applies to all
variables, not just Totalview).

This commit was SVN r22134.
2009-10-23 13:00:59 +00:00
Tim Mattox
e63348a31b Not all systems put true and false in /bin... so let $PATH work for us
and not hardcode /bin/true or /bin/false in the configure.ac
This updates the changes from r22113.

This commit was SVN r22130.

The following SVN revision numbers were found above:
  r22113 --> open-mpi/ompi@214e26b539
2009-10-23 01:16:45 +00:00
Jeff Squyres
3b0bc2a14e Fix one use of OMPI_ENABLE_MPI_PROFILING (in opal!) that escaped
previous testing. 

This commit was SVN r22117.
2009-10-21 01:13:21 +00:00
Ralph Castain
214e26b539 Per Jeff (this work was done on a branch of mine, so I will do the commit):
Re-enable "./autogen.sh -no-ompi" again. If you -no-ompi, the entire OMPI
configury is skipped and the entire ompi/ subtree is not built. There's
some simple m4-isms that prune out the relevant parts.

I added ompi/config/, orte/config/, and opal/config/ directories. I moved a
bunch of m4 files from the top-level config/ dir into ompi/config/, and a few
into orte/config/.

Note that all 3 <project>/config directories have a config_files.m4 file. This
file contains the AC_CONFIG_FILES list for that project. The AC_CONFIG_FILES
call cannot be in an AC_DEFUN macro and conditionally called -- if it is
included at all, Autoconf will process it. Hence, these config_files.m4 files
don't AC_DEFUN -- they just have AC_CONFIG_FILES. m4_ifdef() is used to
conditionally include the files or not.

I moved a bunch of obvious OMPI-only m4 files from config/ to ompi/config/,
but I'm sure that there's more that could go. A ticket will be filed with
thoughts on future work in this area.

This commit was SVN r22113.
2009-10-20 23:44:20 +00:00
Ralph Castain
29bd7e5a53 Grrr....die, datatype test - DIE!
This commit was SVN r21937.
2009-09-04 01:52:08 +00:00
Rainer Keller
c3226b36b7 - It's BUS_ADRERR, not BUSADRERR...
- Fix typos.

This commit was SVN r21808.
2009-08-12 13:07:04 +00:00
Jeff Squyres
846e6e4bad Fix borkedness from r21755:
* No need for OPAL_SIZEOF_BOOL and OPAL_SIZEOF_INT in comm_inln.h --
   just use sizeof()
 * Fix logic in ompi_setup_cxx.m4 to account for the case where we
   ''do'' have a C++ compiler (duh!!)
 * Fix spelling error in a shell variable that ended up making a
   bad/empty #define

This should bring the trunk back to being functional.  Sorry for the
interruption, folks...

This commit was SVN r21758.

The following SVN revision numbers were found above:
  r21755 --> open-mpi/ompi@90d6491737
2009-08-04 18:45:11 +00:00
Jeff Squyres
90d6491737 Since ompi_info is no longer written in C++, we no longer require a
C++ compiler in configure.  If we have a C++ compiler, then the MPI
C++ bindings are built by default.  If we don't have a C++ compiler,
then the MPI C++ bindings are not built by default.

--enable-mpi-cxx will now force an error if there is no C++ compiler
available.  --disable-mpi-cxx (or the lack of a C++ compiler) will now
disable many of the C++ compiler checks in configure.

Note that there are a few items to clean up regarding the difference
between C's _Bool type and C++'s bool type.  Right now, we assume that
they are the same.  But they aren't, and they shouldn't be treated as
such.  This cleanup will be forced in MPI-2.2 with the introduction of
the MPI_C_BOOL MPI datatype.

This commit was SVN r21755.
2009-08-04 11:54:01 +00:00
Brian Barrett
0278b86456 Pass visibility flags to libltdl's CFLAGS, which will result in libltdl
being hidden in libopal.  This seems to make applications which also
use libltdl play nicer.

This commit was SVN r21731.
2009-07-24 04:12:29 +00:00
Jeff Squyres
b921c5d605 Arrgh -- forgot to include this file in r21729. Sorry folks...
This commit was SVN r21730.

The following SVN revision numbers were found above:
  r21729 --> open-mpi/ompi@c7376ae053
2009-07-24 01:04:17 +00:00
Rainer Keller
6c5532072a - Split the datatype engine into two parts: an MPI specific part in
OMPI
   and a language agnostic part in OPAL. The convertor is completely
   moved into OPAL.  This offers several benefits as described in RFC
   http://www.open-mpi.org/community/lists/devel/2009/07/6387.php
   namely:
    - Fewer basic types (int* and float* types, boolean and wchar
    - Fixing naming scheme to ompi-nomenclature.
    - Usability outside of the ompi-layer.
 - Due to the fixed nature of simple opal types, their information is
   completely
   known at compile time and therefore constified
 - With fewer datatypes (22), the actual sizes of bit-field types may be
   reduced
   from 64 to 32 bits, allowing reorganizing the opal_datatype
   structure, eliminating holes and keeping data required in convertor
   (upon send/recv) in one cacheline...
   This has implications to the convertor-datastructure and other parts
   of the code.
 - Several performance tests have been run, the netpipe latency does not
   change with
   this patch on Linux/x86-64 on the smoky cluster.
 - Extensive tests have been done to verify correctness (no new
   regressions) using:
   1. mpi_test_suite on linux/x86-64 using clean ompi-trunk and
    ompi-ddt:
    a. running both trunk and ompi-ddt resulted in no differences
       (except for MPI_SHORT_INT and MPI_TYPE_MIX_LB_UB do now run
       correctly).
    b. with --enable-memchecker and running under valgrind (one buglet
       when run with static found in test-suite, commited)
   2. ibm testsuite on linux/x86-64 using clean ompi-trunk and ompi-ddt:
      all passed (except for the dynamic/ tests failed!! as trunk/MTT)
   3. compilation and usage of HDF5 tests on Jaguar using PGI and
      PathScale compilers.
   4. compilation and usage on Scicortex.
 - Please note, that for the heterogeneous case, (-m32 compiled
   binaries/ompi), neither
   ompi-trunk, nor ompi-ddt branch would successfully launch.

This commit was SVN r21641.
2009-07-13 04:56:31 +00:00
Shiqing Fan
656ec00611 Remove the definition of _WIN32_DCOM. It only enables DCOM when _WIN32_WINNT is less then 0x400 (Win 95, 98), and we are supporting 0x502(Win XP) and above in Open MPI. Thanks George for pointing this out.
This commit was SVN r21555.
2009-06-27 23:36:25 +00:00
Rainer Keller
b572dc3591 - As discussed revert r21330, Fortran-configure info should
not end up in OPAL
 - Will post an updated patch for the OMPI_ALIGNMENT_ parts (within C).

This commit was SVN r21342.

The following SVN revision numbers were found above:
  r21330 --> open-mpi/ompi@95596d1814
2009-06-01 19:02:34 +00:00
Rainer Keller
95596d1814 - Move alignment and size output generated by configure-tests
into the OPAL namespace, eliminating cases like opal/util/arch.c
   testing for ompi_fortran_logical_t.
   As this is processor- and compiler-related information
   (e.g. does the compiler/architecture support REAL*16)
   this should have been on the OPAL layer.
 - Unifies f77 code using MPI_Flogical instead of opal_fortran_logical_t

 - Tested locally (Linux/x86-64) with mpich and intel testsuite
   but would like to get this week-ends MTT output


 - PLEASE NOTE: configure-internal macro-names and
   ompi_cv_ variables have not been changed, so that
   external platform (not in contrib/) files still work.

This commit was SVN r21330.
2009-05-30 15:54:29 +00:00
Rainer Keller
d760604b7f - Factor out OPAL, ORTE and OMPI specific configure-parameters...
Thereby move
     --with-openib-control-hdr-padding from opal_configure_options.m4
   to
     --enable-openib-control-hdr-padding in ompi_check_openib.m4

This commit was SVN r21287.
2009-05-27 03:03:18 +00:00
Josh Hursey
3e847c19f0 Per RFC: MPI Interface Extensions Infrastructure
Add infrastructure for MPI Interface Extensions. This allows a developer to create new MPI interfaces that are non-standard.

The following email thread describes the functionality proposed in the RFC:
  http://www.open-mpi.org/community/lists/devel/2009/05/5997.php

The following wiki page describes how to use and enable the extensions:
  https://svn.open-mpi.org/trac/ompi/wiki/MPIExtensions

This commit was SVN r21272.
2009-05-26 20:49:35 +00:00
Rainer Keller
916eb1fb1e - As proposed in RFC and telcon, warn the user about deprecated
functionality (per MPI-2.1). This warning can be toggled using
   --enable-mpi-interface-warning (default OFF), but can be
   selectively turned on passing
       mpicc -DOMPI_WANT_MPI_INTERFACE_WARNING

   Using icc, gcc < 4.5, warnings (such as in mpi2basic_tests) show:
     type_vector.c:83: warning: ‘MPI_Type_hvector’ is deprecated
     (declared at /home/../usr/include/mpi.h:1379)

   Using gcc-4.5 (gcc-svn) these show up as:
     type_vector.c:83: warning: ‘MPI_Type_hvector’ is deprecated
     (declared at /home/../usr/include/mpi.h:1379):
     MPI_Type_hvector is superseded by MPI_Type_create_hvector in MPI-2.0


   Jeff and I propose to turn such warnings on with Open MPI-1.7 by default.


 - Detection of user-level compiler is handled using the preprocessor
   checks of GASnet's other/portable_platform.h (thanks to Paul Hargrove
   and Dan Bonachea) adapted into ompi/include/mpi_portable_platform.h
   (see comments).

   The OMPI-build time detection is output (Familyname and Version)
   with ompi_info.

   This functionality (actually any upcoming __attribute__) are turned
   off, if a different compiler (and version) is being detected.


 - Note, that any warnings regarding (user-compiler!=build-compiler)
   as discussed in the RFC are _not_ included for now.


 - Tested on Linux with --enable-mpi-interface-warning on
   Linux, gcc-4.5 (deprecated w/ specific msg)
   Linux, gcc-4.3 (deprecated w/o specific msg)
   Linux, pathscale 3.1 (deprecated w/o specific msg)
   Linux, icc-11.0 (deprecated w/o specific msg)

   Linux, PGI-8.0.6 accepts __deprecated__ but does not issue a warning,
   further investigation needed...

This commit was SVN r21262.
2009-05-22 04:39:43 +00:00
Jeff Squyres
c6bfb780e6 Remove an outdated/incorrect comment.
This commit was SVN r21247.
2009-05-16 00:51:13 +00:00
Greg Koenig
60485ff95f This is a very large change to rename several #define values from
OMPI_* to OPAL_*.  This allows opal layer to be used more independent
from the whole of ompi.

NOTE: 9 "svn mv" operations immediately follow this commit.

This commit was SVN r21180.
2009-05-06 20:11:28 +00:00
Brian Barrett
2ca0b7fe44 remove some checks which are not needed after the recent ptmalloc2 changes
This commit was SVN r21042.
2009-04-19 18:17:05 +00:00
Rainer Keller
b0615f3385 - replace Tab
This commit was SVN r20786.
2009-03-16 04:22:22 +00:00
Rainer Keller
cf9db6bb3c - White spaces
This commit was SVN r20783.
2009-03-16 02:04:22 +00:00
Rainer Keller
64f041922c - Another side-effect of the previous work...
- Any $ac_cv-variable does not need to be converted into strings
     before checking
   - That's funny: The check for ac_cv_sizeof_int =... always was wrong.
     We have to DEREF $ac_cv_sizeof_int, dollar missing.
     We always ran on arches, where MPI_OFFSET_TYPE=long was selected...
   - Overly long lines should be split into several AC_MSG_WARN.

This commit was SVN r20782.
2009-03-16 02:00:27 +00:00
Ralph Castain
20b81ff634 Add the PCIE BTL. This won't actually work yet - still need to work through issues with system header files, generalize specification of resources, etc. - but it won't build unless specifically directed to do so. Meantime, any more changes that impact these areas of the code base can be reflected here rather than having to be dealt with later.
This commit was SVN r20734.
2009-03-05 02:40:25 +00:00
Ralph Castain
0d447511a5 Add a shellscript for daemon-less launch of local slave processes. No manpage as this is totally for internal use only.
This commit was SVN r20436.
2009-02-05 06:05:28 +00:00
Jeff Squyres
33fc6bc408 Fixes trac:1637: disable OMPI on OS X 10.3 and earlier.
This commit was SVN r20361.

The following Trac tickets were found above:
  Ticket 1637 --> https://svn.open-mpi.org/trac/ompi/ticket/1637
2009-01-28 01:06:53 +00:00
Ralph Castain
7787f84540 Per the earlier RFC and some discussion at the Dec ORTE design meeting, add the ompi-top tool and all its supporting infrastructure. This includes a new OPAL pstat framework and data type, currently with rather weak support for Mac OSX and pretty complete support for Linux. The Sun team promised to add Solaris support as well.
Also, per chat with Jeff, modified the Makefile.am's of a few orte tools so that they were consistent in the way we generate the ompi-equivalent cmds.

This commit was SVN r20165.
2008-12-22 20:23:05 +00:00
Ralph Castain
1ace83c470 Enable modex-less launch. Consists of:
1. minor modification to include two new opal MCA params:
   (a) opal_profile: outputs what components were selected by each framework
       currently enabled for most, but not all, frameworks
   (b) opal_profile_file: name of file that contains profile info required
       for modex

2. introduction of two new tools:
   (a) ompi-probe: MPI process that simply calls MPI_Init/Finalize with
       opal_profile set. Also reports back the rml IP address for all
       interfaces on the node
   (b) ompi-profiler: uses ompi-probe to create the profile_file, also
       reports out a summary of what framework components are actually
       being used to help with configuration options

3. modification of the grpcomm basic component to utilize the
   profile file in place of the modex where possible

4. modification of orterun so it properly sees opal mca params and
   handles opal_profile correctly to ensure we don't get its profile

5. similar mod to orted as for orterun

6. addition of new test that calls orte_init followed by calls to
   grpcomm.barrier

This is all completely benign unless actively selected. At the moment, it only supports modex-less launch for openib-based systems. Minor mod to the TCP btl would be required to enable it as well, if people are interested. Similarly, anyone interested in enabling other BTL's for modex-less operation should let me know and I'll give you the magic details.

This seems to significantly improve scalability provided the file can be locally located on the nodes. I'm looking at an alternative means of disseminating the info (perhaps in launch message) as an option for removing that constraint.

This commit was SVN r20098.
2008-12-09 23:49:02 +00:00
Ethan Mallove
b409d390bc Add a couple of Libtool tweaks for Sun Studio compatibility:
* Use the (undocumented) `solaris_use_stlport4` libtool variable to
   turn off any Cstd/stlport4 linkage. This allows Open MPI to be C++
   STL agnostic.
 * Patch `config/libtool.m4` in autogen.sh for a bug in Libtool's
   detection of the Sun Studio Fortran compiler. See the below e-mail
   thread for more details:
   http://www.open-mpi.org/community/lists/devel/2008/11/4920.php

This commit was SVN r20036.
2008-11-25 15:59:48 +00:00
Donald Kerr
668eafec88 Support to handle platforms which do not define RLIMIT_MEMLOCK
This commit was SVN r20035.
2008-11-25 03:13:09 +00:00
Jeff Squyres
7b32402959 Fixes from Brian for OS X 10.4.
This commit was SVN r19953.
2008-11-07 22:13:43 +00:00
Jeff Squyres
4f028171a2 Refs trac:1603:
* Add OMPI_F77_CHECK_REAL16_C_EQUV test whether REAL*16 is bit
   equivalent to long double.  AC_DEFINE OMPI_REAL16_MATCHES_C with
   result (0 or 1).
 * Update ompi_info to only show real16 support if
   OMPI_REAL16_MATCHES_C is 1.
 * Update DDT to only support REAL16 and COMPLEX32 if
   1==OMPI_REAL16_MATCHES_C.
 * MPI Op function pointer tabls will have NULL for the REAL16 and
   COMPLEX32 entries if 0==OMPI_REAL16_MATCHES_C.
 * Slightly cleaned up OMPI_F77_GET_ALIGNMENT and OMPI_F77_CHECK m4
   tests (use OMPI_VAR_SCOPE_PUSH/POP).

This commit was SVN r19948.

The following Trac tickets were found above:
  Ticket 1603 --> https://svn.open-mpi.org/trac/ompi/ticket/1603
2008-11-07 20:37:21 +00:00
Ralph Castain
6e5d844c36 Roll in the revamped IOF subsystem. Per the devel mailing list email, this is a complete rewrite of the iof framework designed to simplify the code for maintainability, and to support features we had planned to do, but were too difficult to implement in the old code. Specifically, the new code:
1. completely and cleanly separates responsibilities between the HNP, orted, and tool components.

2. removes all wireup messaging during launch and shutdown.

3. maintains flow control for stdin to avoid large-scale consumption of memory by orteds when large input files are forwarded. This is done using an xon/xoff protocol.

4. enables specification of stdin recipients on the mpirun cmd line. Allowed options include rank, "all", or "none". Default is rank 0.

5. creates a new MPI_Info key "ompi_stdin_target" that supports the above options for child jobs. Default is "none".

6. adds a new tool "orte-iof" that can connect to a running mpirun and display the output. Cmd line options allow selection of any combination of stdout, stderr, and stddiag. Default is stdout.

7. adds a new mpirun and orte-iof cmd line option "tag-output" that will tag each line of output with process name and stream ident. For example, "[1,0]<stdout>this is output"

This is not intended for the 1.3 release as it is a major change requiring considerable soak time.

This commit was SVN r19767.
2008-10-18 00:00:49 +00:00
Rolf vandeVaart
1ad9d0459e Add a check for LOCK_SHARED in the sys/synch.h file. If it exists then smash it to avoid problems with preprocessor and C++.
This fixes trac:1477.

Help provided by Jeff and Terry.

This commit was SVN r19533.

The following Trac tickets were found above:
  Ticket 1477 --> https://svn.open-mpi.org/trac/ompi/ticket/1477
2008-09-10 12:58:30 +00:00
Ethan Mallove
cb927614c7 Fixes trac:1448 (''Need configure workaround for Sun Studio compiles on Sparc Solaris'')
This commit was SVN r19307.

The following Trac tickets were found above:
  Ticket 1448 --> https://svn.open-mpi.org/trac/ompi/ticket/1448
2008-08-16 00:47:33 +00:00
Brian Barrett
4a2cf9b9b9 OS X 10.5 provides a libutil in /usr/lib that is not the normal libutil.
Don't include it in LIBS if it doesn't actually contain the symboles we're
looking for.  Darwin's won't, LInux's will, so things will work out right.

This commit was SVN r19283.
2008-08-13 20:56:06 +00:00
Jeff Squyres
1a3045ff81 * Remove some extraneous AC_MSG_RESULT's
* Make the results of the top-level configure.ac test for
   _SC_NPROCESSORS_ONLN be cached so that we can check for it
   elsewhere (e.g., opal/mca/paffinity/posix/configure.m4)
 * Update top-level configure.ac test for _SC_NPROCESSORS_ONLN: stamp
   out another AC_TRY_COMPILE
 * Ensure paffinity:posix doesn't even try to compile if we don't
   have _SC_NPROCESSORS_ONLN
 * Minor style updates

This commit was SVN r19118.
2008-08-01 11:41:08 +00:00
Jeff Squyres
773f79f495 Follow-on to r19040; missed one file on the checkin.
This commit was SVN r19041.

The following SVN revision numbers were found above:
  r19040 --> open-mpi/ompi@9f4d4c4312
2008-07-25 21:35:29 +00:00
Brian Barrett
e9c50a29ba Some (rare) platforms only have a #define for htonl and friends,
but not anything in libc.  Which causes an incorrect answer for
AC_CHECK_FUNCS.  Work around that by also checking for the
#define.

This commit was SVN r18730.
2008-06-24 23:20:25 +00:00
Brian Barrett
8cff3131d6 Remove memory tests, as they're out of date
This commit was SVN r18656.
2008-06-14 14:01:05 +00:00
George Bosilca
8e8b8950ef Add support for Interix.
This commit was SVN r17983.
2008-03-26 23:20:33 +00:00
Jeff Squyres
f97130c3aa Sanity check: don't allow --disable-binaries with --enable-dist.
This commit was SVN r17946.
2008-03-25 12:01:36 +00:00
George Bosilca
18d5673d6b Explicitly state that the libtool stage 2 has to be the last thing !!!
This commit was SVN r17774.
2008-03-06 22:17:40 +00:00
George Bosilca
22a8998b3e The second stage of the libtool detection is supposed to
be the last piece of code that requires compile and link
tests. Therefore, the visibility detection should happens
before or it will fail.

This commit was SVN r17773.
2008-03-06 22:15:10 +00:00
Ralph Castain
d70e2e8c2b Merge the ORTE devel branch into the main trunk. Details of what this means will be circulated separately.
Remains to be tested to ensure everything came over cleanly, so please continue to withhold commits a little longer

This commit was SVN r17632.
2008-02-28 01:57:57 +00:00
Jeff Squyres
7d03300a76 Based on a patch from Brian about how to remove "naked" AC defined
macros in mpi.h. (e.g., HAVE_LONG_LONG); instead, prefix _all_ macros
with "OMPI_".

This commit was SVN r17591.
2008-02-26 01:45:32 +00:00
George Bosilca
512b24affb Add support for all optional Fortran logical types (MPI_LOGICAL1,
MPI_LOGICAL2, MPI_LOGICAL4 and MPI_LOGICAL8). This commit close
the ticket #331.

This commit was SVN r17473.
2008-02-15 22:54:20 +00:00
Andreas Knüpfer
c53e19be46 bringing VampirTrace integration to the trunk
This commit was SVN r17278.
2008-01-28 08:39:48 +00:00
Jeff Squyres
a348da4eee Experiment with using the ustar format for tarballs; seems to work on
the platforms we care about...?

This commit was SVN r17218.
2008-01-24 23:53:43 +00:00
Ethan Mallove
005652c9d4 * Embed ident strings into the Open MPI libraries using one of the following
methods (in order of precedence):
  1. #pragma ident <ident string> (e.g., Intel and Sun)
  1. #ident <ident string> (e.g., GCC)
  1. static const char ident[] = <ident string> (all others)
By default, the ident string used is the standard Open MPI version string. Only
the following libraries will get the embedded version strings (e.g., DSOs will
not):
  * libmpi.so
  * libmpi_cxx.so
  * libmpi_f77.so
  * libopen-pal.so
  * libopen-rte.so
* Added two new configure options:
  * `--with-package-name="STRING"` (defaults to "Open MPI username@hostname
    Distribution"). `STRING` is displayed by `ompi_info` next to the "Package"
    heading.
  * `--with-ident-string="STRING"` (defaults to the standard Open MPI version
    string - e.g., X.Y.Zr######). `%VERSION%` will expand to the Open MPI
    version string if it is supplied to this configure option.

This commit was SVN r16644.
2007-11-03 02:40:22 +00:00
Brian Barrett
f2d5d663cc re-enable the disable-dlopen case
This commit was SVN r16003.
2007-08-29 03:28:29 +00:00
Brian Barrett
1b76d46bd7 Fix error that was preventing anyone with LT 1.5.x from running autogen.sh.
This commit was SVN r15911.
2007-08-17 17:11:36 +00:00
Brian Barrett
2d4918b09d Support versions of the Libtool 2.1a snapshots after the lt_dladvise code
was brought in.  This supercedes the GLOBL patch that we had been using
with Libtool 2.1a versions prior to the lt_dladvise code.  Autogen
tries to figure out which version you're on, so either will now work with
the trunk.

This commit was SVN r15903.
2007-08-17 04:08:23 +00:00
Brian Barrett
c9e3654a85 Allow OMPI components to modify the link options for libmpi.so. This
functionality used to exist, but I removed it like a year ago because
it wasn't being used.  Well, now I need it :).

This commit was SVN r15901.
2007-08-17 03:52:53 +00:00
George Bosilca
8350ba19db Add protections against the shlwapi.h header file.
This commit was SVN r15597.
2007-07-25 03:49:31 +00:00
Brian Barrett
5b9fa7e998 reapply r15517 and r15520, which were removed in r15527 so that I could get
the RML/OOB merge in slightly easier

This commit was SVN r15530.

The following SVN revision numbers were found above:
  r15517 --> open-mpi/ompi@41977fcc95
  r15520 --> open-mpi/ompi@9cbc9df1b8
  r15527 --> open-mpi/ompi@2d17dd9516
2007-07-20 02:34:29 +00:00
Brian Barrett
39a6057fc6 A number of improvements / changes to the RML/OOB layers:
* General TCP cleanup for OPAL / ORTE
  * Simplifying the OOB by moving much of the logic into the RML
  * Allowing the OOB RML component to do routing of messages
  * Adding a component framework for handling routing tables
  * Moving the xcast functionality from the OOB base to its own framework

Includes merge from tmp/bwb-oob-rml-merge revisions:

    r15506, r15507, r15508, r15510, r15511, r15512, r15513

This commit was SVN r15528.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r15506
  r15507
  r15508
  r15510
  r15511
  r15512
  r15513
2007-07-20 01:34:02 +00:00
Brian Barrett
2d17dd9516 temporarily back our r15517 and 15520 so that I can get the RML / OOB changes
to cleanly apply

This commit was SVN r15527.

The following SVN revision numbers were found above:
  r15517 --> open-mpi/ompi@41977fcc95
2007-07-20 01:10:34 +00:00
Ralph Castain
41977fcc95 Remove the cellid field from the orte_process_name_t structure. This only affects a handful of files in itself, but...
Cleanup ALL instances of output involving the printing of orte_process_name_t structures using the ORTE_NAME_ARGS macro so that the number of fields and type of data match. Replace those values with a new macro/function pair ORTE_NAME_PRINT that outputs a string (using the new thread safe data capability) so that any future changes to the printing of those structures can be accomplished with a change to a single point.

Note that I could not possibly find outputs that directly print the orte_process_name_t fields, but only dealt with those that used ORTE_NAME_ARGS. Hence, you may still have a few outputs that bark during compilation. Also, I could only verify those that fall within environments I can compile on, so other environments may yield some minor warnings.

This commit was SVN r15517.
2007-07-19 20:56:46 +00:00
George Bosilca
725f776bb2 This patch was originally proposed by Brian, I just did some small optimizations.
It solve the problem with the MPI_Aint alignment that showed up on Solaris
Sparc and on heterogeneous environments when dealing with the data-type description.
The solution is to move the displacement array from the packed array if we
detect that the local architecture required MPI_Aint to be aligned to an
MPI_Aint boundary (which is not the case for x86 architectures if MPI_Aint
is a 64 bits type).

This commit was SVN r15395.
2007-07-13 05:45:02 +00:00
Josh Hursey
3f0bca5017 the other half of r15392. Sorry for the autogen :/
This commit was SVN r15394.

The following SVN revision numbers were found above:
  r15392 --> open-mpi/ompi@73273397f5
2007-07-12 21:30:59 +00:00
Brian Barrett
1d02b9e7b5 Fix a bunch of issues exposed by Ken Cain in getting Open MPI to work with
VxWorks.  Still some issues remaining, I'm sure.

Refs trac:1010

This commit was SVN r15320.

The following Trac tickets were found above:
  Ticket 1010 --> https://svn.open-mpi.org/trac/ompi/ticket/1010
2007-07-10 03:46:57 +00:00
Rainer Keller
d3372729bb - Support for opt. MPI_REAL2 (who has that?)
to make checks for MPI-implementations fail in the right way ,-]
 - check in configure.ac
 - BINARY INCOMPATIBLE change to mpif-common.h
   (if implemented the *right* way)
   Actually OMPI_F90_CHECK takes two arguments, not three.
 - Only have corresponding C-Type, if the opt. Fortran
   type is really supported,
   Otherwise pass ompi_mpi_unavailable to DECLARE_MPI_SYNONYM_DDT;
 - Reviewed by George and Jeff

This commit was SVN r15133.
2007-06-19 05:03:11 +00:00
Brian Barrett
5e2d9bec39 allow regular expressions in compiler arguments for the multi-lib support
This commit was SVN r14897.
2007-06-06 03:42:17 +00:00
Bill D'Amico
9b5f73976d Bring Portable Linux Processor Affinity into trunk.
Changes paffinity interface to use a cpu mask for available/preferred cpus
rather than the current coarse grained paffinity that lets the OS choose
which processor.

Macros for setting and clearing masks are provided.

Solaris and windows changes have not been made. Solaris subdirectory has some
suggested changes - however the relevant man pages for the Solaris 10 APIs
have some ambiguity regarding order in which one create and sets a processor
set. As we did not have access to a solaris 10 machine we could not test to
see the correct way to do the work under solaris.

This commit was SVN r14887.
2007-06-05 22:07:30 +00:00
Brian Barrett
508da4e959 OS X apparently really doesn't like shared libraries with unresolvable
symbols in them and environ is defined only in the final application
(probably in crt1.o).  Apple provides a function for getting at the
environment, so use that instead if it's available.

This commit was SVN r14857.
2007-06-05 03:03:59 +00:00
Brian Barrett
38698adf29 Use the AC_PROG_GREP available in AC 2.60 and later. This works around
an issue on Solaris where /usr/bin/grep doesn't understand -q.  The
grep that AC_PROG_GREP finds (/usr/xpg4/bin/grep), which is POSIX
compliant and understands -q.  Also fix one instance where egrep was
used instead of $EGREP.

This commit was SVN r14829.
2007-06-01 02:31:15 +00:00
Brian Barrett
eff77f7cbb Need sys/socket for these defines on some platforms (Solaris, and I"m sure others)
This commit was SVN r14778.
2007-05-27 03:52:56 +00:00
Brian Barrett
77a80b2612 sockaddr_storage check needs sys/socket.h
This commit was SVN r14702.
2007-05-20 21:54:43 +00:00
Brian Barrett
33a5758521 Some IPv6 improvements:
* Move ipv6comat.h code into opal_config_bottom.h and change into some
    more intelligent testing of structures
  * Change opal's if interface to use sockaddr instead of sockaddr_storage,
    as the RFCs suggest we do
  * Move the networking code in opal that isn't directly related to if
    detection into net.h
  * Add quicky function to get the port out of either a sockaddr_in
    or sockaddr_in6, saving a bunch of code in the oob.
  * Update TCP oob and btl with new interface

This commit was SVN r14679.
2007-05-17 01:17:59 +00:00
Brian Barrett
ce4e24c399 need to empty location of libltdl.la so that we don't try to build it when
we're not using dlopen

This commit was SVN r14662.
2007-05-15 23:43:38 +00:00
Brian Barrett
21e00f6f0c Clean up a couple of configure things:
* Require Autoconf 2.60 or higher and remove some cruft
    required for AC 2.59 or the AC 2.59 / AC 2.60 mix
  * Remove a bunch of now unnecessary AC_SUBST calls
  * Use the libtool-provided variables for the -I and
    library to use when compiling against ltdl

Fixes trac:1000

This commit was SVN r14652.

The following Trac tickets were found above:
  Ticket 1000 --> https://svn.open-mpi.org/trac/ompi/ticket/1000
2007-05-15 04:23:48 +00:00
Sven Stork
a04c8eb39a - Bring over the visibility feature, for a finer symbol export control
via the visibility feature that is provided by some compilers.

  Per default this feature is disabled, to enable it you need to
  configure with --enable-visibility and obviously you need a compiler
  with visibility support. Please refer to the wiki for more information.
  https://svn.open-mpi.org/trac/ompi/wiki/Visibility

This commit was SVN r14582.
2007-05-04 09:03:37 +00:00
Jeff Squyres
c4c68e666a Merge in the ipv6 work from /tmp/ipv6-merge.
This commit was SVN r14503.
2007-04-25 01:55:40 +00:00
Jeff Squyres
00347db419 Put in a check for RLIMIT_PROC before trying to use it.
This commit was SVN r14502.
2007-04-25 01:54:37 +00:00
Jeff Squyres
0ba47105ed Merge the /tmp/jms-installdirs-trunk branch into the trunk. This
finally brings in functionality that is already on the 1.2 branch, and
was developed and tested in the v1.2ofed branch (and other places).

Short version of new features:

 * Support for ibv_fork_init() 
 * Automatically fill in the openib BTL bandwidth value by 
   querying the HCA port 
 * Installdirs functionality 
 * Fixes to always use -I in the Fortran wrapper compilers (#924) 
 * Gleb's mpool updates 
 * Remove some kruft in btl/openib/configure.m4, therefore 
   fixing the harmless warnings noted in #665 
 * Bunches of updates to the Linux RPM spec file 

I.e., effectively the same thing that r14411 brought to the v1.2
branch.

Also effectively brought in r14432 and r14433 (some fixes on top of
the original r14411 commit to v1.2).  Still need to bring in the moral
equivalent of r14445 after this commit (fixes to installdirs).

This commit was SVN r14449.

The following SVN revision numbers were found above:
  r14411 --> open-mpi/ompi@83b31314ae
  r14432 --> open-mpi/ompi@a48f160595
  r14433 --> open-mpi/ompi@68f346d2bc
  r14445 --> open-mpi/ompi@13d366b827
2007-04-21 00:15:05 +00:00
Jeff Squyres
5f1eb97ad8 Be sure to check for the syslog() function (it doesn't exist in
VXWorks, for example).  Checked with George before committing this to
ensure that nothing broke on Windows -- he said it was ok.

This commit was SVN r14388.
2007-04-17 03:11:30 +00:00
Josh Hursey
dadca7da88 Merging in the jjhursey-ft-cr-stable branch (r13912 : HEAD).
This merge adds Checkpoint/Restart support to Open MPI. The initial
frameworks and components support a LAM/MPI-like implementation.

This commit follows the risk assessment presented to the Open MPI core
development group on Feb. 22, 2007.

This commit closes trac:158

More details to follow.

This commit was SVN r14051.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r13912

The following Trac tickets were found above:
  Ticket 158 --> https://svn.open-mpi.org/trac/ompi/ticket/158
2007-03-16 23:11:45 +00:00
Josh Hursey
0404444dbe * Added 2 new MCA parameters
- mca_base_param_file_prefix
     (Default: NULL)
     This is the fullname of the "-am" mpirun option. Used to specify a ':'
     separated list of AMCA parameter set files.
  - mca_base_param_file_path
     (Default: $SYSCONFDIR/amca-param-sets/:$CWD)
     The path to search for AMCA files with relative paths. A warning will be
     printed if the AMCA file cannot be found.

* Added a new function "mca_base_param_recache_files" the re-reads the file
configurations. This is used internally to help bootstrap the MCA system.

* Added a new orterun/mpirun command line option '-am' that aliases for the
mca_base_param_file_prefix MCA parameter

* Exposed the opal_path_access function as it is generally useful in other
places in the code.

* New function "opal_cmd_line_make_opt_mca" which will allow you to append a
new command line option with MCA parameter identifiers to set at the same
time. Previously this could only be done at command line declaration time.

* Added a new directory under the $pkgdatadir named "amca-param-sets" where all
the 'shipped with' Open MPI AMCA parameter sets are placed. This is the first
place to search for AMCA sets with relative paths.

* An example.conf AMCA parameter set file is located in
contrib/amca-param-sets/.

* Jeff Squyres contributed an OpenIB AMCA set for benchmarking.

Note: You will need to autogen with this commit as it adds a configure param.
  Sorry :(

This commit was SVN r13867.
2007-03-01 13:39:20 +00:00
Rainer Keller
38696e8d32 - Check for attributes, after C and C++ have been set up.
- Set ompi-specific autoconf cache-variables
 - Implement one function to check for availability of an
   attribute with the possibility for a cross-check.
 - Do cross-checks for
     __attribute__(format)
     __attribute__(nonnull)
     __attribute__(sentinel)
     __attribute__(warn_unused_result)
 - Grep the compilers warnings for keywords regarding ignored
   attributes.
 - Include also the no_instrument_function

This commit was SVN r13556.
2007-02-08 13:34:44 +00:00
Jeff Squyres
0732c555de Refs trac:853
Add new function opal_get_num_processors() that will return the number
of processors on the local host.  Does the Right thing in POSIX
environments (to include a special case for OS X), and will shortly do
the Right Thing for Windows (this commit includes a change to
configure, so I wanted to get that in before the US workday -- the
Windows code can some shortly because it won't involve configury
changes).

This commit was SVN r13506.

The following Trac tickets were found above:
  Ticket 853 --> https://svn.open-mpi.org/trac/ompi/ticket/853
2007-02-06 12:03:56 +00:00
Rolf vandeVaart
bf5113198d Update to orte-clean so it will remove files on local and
remote nodes.  It will also kill off rogue orteds and orterun
processes.  The killing of processes is ifdef'ed out for Windows
since I do not know how to do it there.  Note that this change
will requite an autogen.  

This commit was SVN r13477.
2007-02-03 00:25:42 +00:00
Jeff Squyres
add3909096 Back out 13076 and 13077 in favor of a much simpler approach.
Sorry for the configure change -- hopefully it's early enough in the
morning that it won't affect people... (new approach won't have a
configure change).

Refs trac:739.

This commit was SVN r13080.

The following Trac tickets were found above:
  Ticket 739 --> https://svn.open-mpi.org/trac/ompi/ticket/739
2007-01-11 14:07:15 +00:00