ports/openmpi
ports/openmpi
1
1
Форкнуть 0
Код Релизы Активность
28 465 коммитов 3 Ветки 0 Теги 130 MiB
d72c4e9d20
Граф коммитов

28465 Коммитов

This Branch
This Branch
Все ветки
Автор SHA1 Сообщение Дата
bosilca
d72c4e9d20
Merge pull request #5171 from bosilca/topic/fix_merge 
Fix merge conflict related to function renaming.
 2018-05-15 14:14:10 -04:00
George Bosilca
7191ea120c
Fix merge conflict related to function renaming. 
Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
 2018-05-15 11:34:20 -04:00
bosilca
2ab628b92e
Merge pull request #5074 from bosilca/topic/remove_warnings 
Remove warnings identified by clang.
 2018-05-15 11:15:23 -04:00
bosilca
d13b9a2e25
Merge pull request #5156 from ggouaillardet/topic/reduce_scatter_block 
coll: reduce_scatter_block: rename and MCA parameter description fix
 2018-05-15 11:13:26 -04:00
bosilca
9f353fe3d4
Merge pull request #5163 from mkurnosov/reduce-scatter-block-rhalving 
coll: reduce_scatter_block: add recursive halving algorithm
 2018-05-15 11:10:06 -04:00
Mikhail Kurnosov
82299a9c04 coll: reduce_scatter_block: add recursive halving algorithm 
Signed-off-by: Mikhail Kurnosov <mkurnosov@gmail.com>
 2018-05-15 08:20:32 +07:00
Brian Barrett
3c9bb61c6b dist: Update NEWS with 3.1.0 items 
3.1.0 has now shipped, so update the NEWS file in master with
the items from 3.1.0 and prune the Master list as needed.

Signed-off-by: Brian Barrett <bbarrett@amazon.com>
 2018-05-14 11:11:32 -07:00
Jeff Squyres
93930a2853
Merge pull request #5160 from RandomDSdevel/fix-5015 
config/opal_setup_java.m4:  Fix #5015.
 2018-05-09 18:58:17 -04:00
Bryce Glover
4a05c7e29f config/opal_setup_java.m4: Fix #5015. 
That PR accidentally changed Open MPI's build configuration infrastruc-
ture's Java toolchain detection logic so that it would, as reported by @bosilca
in https://github.com/open-mpi/ompi/pull/5001#issuecomment-387803012 and tracked down by me in https://github.com/open-mpi/ompi/pull/5001#issuecomment-387851005, abort your entire
in-progress Open MPI build when it failed to find an OS X/macOS JDK instead of
simply falling back to checking for a JDK in locations where it would be found
on other platforms.  _Oops…!_

Signed-off-by: Bryce Glover <RandomDSdevel@gmail.com>
 2018-05-09 17:37:33 -04:00
Gilles Gouaillardet
ce7b3113f6 coll: reduce_scatter_block: rename and MCA parameter description fix 
- rename ompi_coll_base_reduce_scatter_block_basic to
   more self descriptive ompi_coll_base_reduce_scatter_block_basic_linear
 - fix the description of the coll_tuned_reduce_scatter_block_algorithm
   MCA param

this fixes and documents previous open-mpi/ompi@0e8b35b615

MPI_Reduce_scatter_block used to be implemented by the coll/basic module only.
A new algo (recursive doubling) was recently introduced and can be used via the coll/tuned module,
but we never intended to make it the default algo.
In order to "restore" the previous default, the initial algo was moved from coll/basic to coll/base,
and is now used by default by coll/tuned.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
 2018-05-09 08:54:48 +09:00
Nathan Hjelm
6093f2dcb4
Merge pull request #5159 from hjelmn/osc_rdma_fx 
osc/rdma: fix SEGV will null origin in FOP in debug build
 2018-05-08 16:15:49 -06:00
Nathan Hjelm
cf585d725c osc/rdma: fix SEGV will null origin in FOP in debug build 
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2018-05-08 14:10:20 -06:00
Jeff Squyres
b39bbfb3c0
Merge pull request #5142 from mkurnosov/base-reduce-remove-warnings 
coll/base/reduce: remove warning identified by Coverity Scan
 2018-05-07 15:49:56 -04:00
Gilles Gouaillardet
0e8b35b615 coll/tuned: use basic algo for reduce_scatter_block by default 
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
 2018-05-07 16:11:44 +09:00
Gilles Gouaillardet
32095be0d6 coll/{base,basic}: move reduce_scatter_block from basic to base 
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
 2018-05-07 16:11:38 +09:00
Howard Pritchard
db45d61dfa
Merge pull request #5147 from hppritcha/topic/plug_debug_hole_in_verbs 
btl/openib: add conditional around an assert
 2018-05-05 08:12:53 -06:00
Geoff Paulsen
a480e40d61
Merge pull request #5144 from gpaulsen/topic/fix_make_check_opal_fifo 
Fixing 'make check' test opal_fifo.
 2018-05-04 16:49:58 -05:00
Howard Pritchard
30eed9f035 btl/openib: addition conditional around an assert 
A user trying to build Open MPI with explicit use
of CFLAGS on the make command line hit problems.

This fixes one of the problems.

https://www.mail-archive.com/users@lists.open-mpi.org//msg32241.html

Signed-off-by: Howard Pritchard <hppritcha@gmail.com>
 2018-05-04 14:17:07 -06:00
Howard Pritchard
4e917b7692
Merge pull request #5087 from mkurnosov/base-reduce-scatter-block 
coll/base: add recursive doubling algorithm for MPI_Reduce_scatter_block
 2018-05-04 11:58:26 -06:00
Ralph Castain
ba40e2173d
Merge pull request #5146 from rhc54/topic/fin 
Ensure pmix_cleanup finalizes the class system
 2018-05-04 07:34:38 -07:00
Mikhail Kurnosov
ba968e4490 coll/base/reduce: Remove warning identified by Coverity Scan 
Signed-off-by: Mikhail Kurnosov <mkurnosov@gmail.com>
 2018-05-04 20:48:37 +07:00
Ralph Castain
4ff61450a4 Ensure pmix_cleanup finalizes the class system 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2018-05-04 06:22:36 -07:00
Geoffrey Paulsen
cc9f713d09 Fixing 'make check' test opal_fifo. 
xlc on ppc64le complains about incompatible pointer types discards qualifiers.
This fix allows 'make check' to pass on ppc64le Power9 for master and v3.1.x.

> opal_fifo.c:110:26: warning: assigning to 'opal_list_item_t *' (aka 'struct opal_list_item_t *') from
>       'volatile opal_list_item_t *volatile' (aka 'volatile struct opal_list_item_t *volatile') discards qualifiers
>       [-Wincompatible-pointer-types-discards-qualifiers]
>     for (count = 0, item = fifo->opal_fifo_head.data.item ; item != &fifo->opal_fifo_ghost ;
>                          ^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> 1 warning generated.

Signed-off-by: Geoffrey Paulsen <gpaulsen@us.ibm.com>
 2018-05-03 21:31:27 -05:00
Mikhail Kurnosov
8cf8553abd Resolve merge conflicts 
Signed-off-by: Mikhail Kurnosov <mkurnosov@gmail.com>
 2018-05-03 07:28:32 +07:00
Nathan Hjelm
c22c485837
Merge pull request #5136 from hjelmn/mtl_fix 
mtl: reset ompi_mtl_base_selected_component on framework close
 2018-05-02 15:48:54 -06:00
Joshua Ladd
32ddc6af7e
Merge pull request #5094 from xinzhao3/topic/osc-win-fix-master 
OMPI/OSC/UCX: fix issue in impl of MPI_Win_create_dynamic/MPI_Win_attach/MPI_Win_detach
 2018-05-02 17:42:34 -04:00
Nathan Hjelm
f432d07844 mtl: reset ompi_mtl_base_selected_component on framework close 
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2018-05-02 14:53:34 -06:00
Xin Zhao
147299dedd
Merge pull request #5134 from xinzhao3/topic/osc-topic 
OMPI/OSC/UCX: set priority to 0.
 2018-05-02 13:22:17 -07:00
Xin Zhao
3f5ac97649 OMPI/OSC/UCX: set priority to 0. 
Signed-off-by: Xin Zhao <xinz@mellanox.com>
 2018-05-02 21:40:06 +03:00
Yossi Itigin
66d931b7c4
Merge pull request #5116 from yosefe/topic/ucx-connect-errs 
ucx: improve error messages during connection establishment
 2018-05-02 14:04:24 +03:00
Jeff Squyres
b2aaf28a67
Merge pull request #5113 from ThemosTsikas/patch-2 
Use standard-conforming dummy names for Fortran bindings
 2018-05-02 06:36:08 -04:00
Nathan Hjelm
1aa82c0e08
Merge pull request #5125 from hjelmn/romio_mpi3 
io/romio314: fix two more MPI-3 compliance issues
 2018-05-01 20:21:57 -06:00
Nathan Hjelm
0f565a734e
Merge pull request #5126 from hjelmn/ompitrace_mpi3 
ompitrace: MPI_Address -> MPI_Get_address
 2018-05-01 20:21:37 -06:00
Themos Tsikas
4d126c16fa mpi/fortran: use conformant dummy names for Fortran bindings 
The MPI spec defines that the "mpi" and "mpi_f08" module Fortran
bindings support passing by parameters by name.  Hence, we need to use
the MPI-spec-defined parameter names ("dummy variables", in Fortran
parlance) for the "mpi" and "mpi_f08" modules.

Specifically, Fortran allows calls to procedures to be written with
keyword arguments, e.g., "call mpi_sizeof(x=x,size=rsize,ierror=ier)"
An "explicit interface" for the procedure must be in scope for this to
be allowed in a Fortran program unit.  Therefore, the explicit
interface blocks we provide in the "mpi" and "mpi_f08" modules must
match the MPI published standard, including the names of the dummy
variables (i.e., parameter names), as that is how Fortran programs may
call them.

Note that we didn't find this issue previously because even though the
MPI spec *allows* for name-based parameter passing, not many people
actually use it.  I suspect that we might have some more incorrect
parameter names -- we should probably do a full "mpi" / "mpi_f08"
module parameter name audit someday.

Thanks to Themos Tsikas for reporting the issue and supplying the
initial fix.

Signed-off-by: themos.tsikas@nag.co.uk
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
 2018-05-02 09:42:19 +09:00
Nathan Hjelm
c6475e572f ompitrace: MPI_Address -> MPI_Get_address 
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2018-05-01 15:20:02 -06:00
Nathan Hjelm
ae17908f35 io/romio314: fix two more MPI-3 compliance issues 
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2018-05-01 15:18:18 -06:00
Jeff Squyres
72f2c3befe
Merge pull request #5121 from blegat/bl/cartcreatebracket 
Remove brackets for ndims for c++ doc of Cart_create
 2018-05-01 13:37:14 -04:00
Nathan Hjelm
bfd8ee7d57
Merge pull request #4898 from bosilca/topic/dist_graph 
Allow MPI_PROC_NULL as neighbor.
 2018-05-01 09:55:27 -06:00
Nathan Hjelm
85d1965a0f
Merge pull request #4828 from hppritcha/topic/update_lanl_toss_platform 
lanl/platform: add new toss2/3 platform files
 2018-05-01 09:52:14 -06:00
Nathan Hjelm
380dcb57de
Merge pull request #5072 from bosilca/topic/datatype_add_size_t 
Allow OPAL DDT to receive size_t count argument.
 2018-05-01 09:47:45 -06:00
Nathan Hjelm
e9ef7aa256
Merge pull request #4985 from mkurnosov/spacc-scan-exscan 
coll/spacc: Add recursive doubling algorithm for Scan and Exscan
 2018-05-01 09:21:23 -06:00
Benoît Legat
709c4f6646 Remove brackets for ndims for c++ doc of Cart_create 
Signed-off-by: Benoît Legat <benoit.legat@gmail.com>
 2018-05-01 12:00:55 +02:00
Geoff Paulsen
591b174434
Merge pull request #5003 from sam6258/shmem_free_fix 
ompi/oshmem: fix shmem_free to perform no-op on null ptr
 2018-04-30 12:03:24 -05:00
Yossi Itigin
385f38ab4e ucx: improve error messages during connection establishment 
Also, unite common code calling ucp_ep_create()

Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
 2018-04-30 15:45:05 +03:00
Ralph Castain
0552d12771
Merge pull request #5111 from rhc54/topic/silence 
Silence warning
 2018-04-27 08:57:32 -07:00
Ralph Castain
d2040497b8 Silence Coverity warning 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2018-04-27 07:30:00 -07:00
KAWASHIMA Takahiro
dc0f984743
Merge pull request #5015 from RandomDSdevel/fix-configure-OS-X-and-macOS-JDK-path-resolution 
config/opal_setup_java.m4:  Improve JDK Tool Path Resolution on OS X/macOS
 2018-04-27 10:13:12 +09:00
bosilca
cdfb7fdc2b
Merge pull request #5110 from ninadkhanolkar/monitoring_update 
Updated aggregate_profile.pl
 2018-04-26 22:28:35 +01:00
Bryce Glover
8c32cd8970 config/opal_setup_java.m4: Improve JDK tool path resolution on OS X/macOS. 
Also avoid picking up Apple's Java shims via the sym. links to them in
`/usr/bin` on systems where any one of them could possibly exhibit behavior
that is erratic and, to some extent, likely to be incorrect nowadays (cf.:

- https://www.mail-archive.com/devel@lists.open-mpi.org/msg20551.html
- https://github.com/open-mpi/ompi/pull/5015#issuecomment-379324639
- the last part  of
  https://github.com/open-mpi/ompi/pull/5015#discussion_r184187064
- https://github.com/open-mpi/ompi/pull/5015#issuecomment-384136871

for more detailed context.)

Works alongside #5001 to close #5000.

Signed-off-by: Bryce Glover <RandomDSdevel@gmail.com>
 2018-04-26 17:14:07 -04:00
Ralph Castain
1e8add52d7 Silence warning 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2018-04-26 11:45:25 -07:00