When querying an info value, copy out exactly as many characters as
the caller asked for -- do not artificially truncate the target just
to ensure that it is \0-terminated.
Specifically: do not use opal_string_copy() to copy info values,
because opal_string_copy() will guarantee to \0-terminate the target,
even if it means truncating the target. E.g., if the caller calls
opal_info_get_nolock() with valuelen=5, opal_string_copy() will return
"1234\0" -- which is wrong. This commit fixes the behavior to return
"12345".
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
This commit contains the following changes:
- Remove the unused opal_test_init/opal_test_finalize
functions. These functions are not used by anything in the code
base or MTT. Tests use opal_init_util/opal_finalize_util instead.
- Get rid of gotos in opal_init_util and opal_init. Replaced them
with a cleaner solution.
- Automatically register cleanup functions in init functions. The
cleanup functions are executed in the reverse order of the
initialization functions. The cleanup functions are run in
opal_finalize_util() before tearing down the class system.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
PR #5241 provided an MCA variable to allow multi-threaded opal_progress.
However, it allowed to update the linked list even when multiple threads was
allowed to call opal_progress. This caused a scenario when a more recent thread
could complete it's progress and fail the assert(sync ==
wait_sync_list).
Allowing to update the linked list only for the case when the number of threads
exceeds the threshold fixes the problem.
Signed-off-by: Aravind Gopalakrishnan <Aravind.Gopalakrishnan@intel.com>
remove whitespace around '=' when setting btl_uct_LIBS
Thanks Ake Sandgren for reporting this
Refs. open-mpi/ompi#6173
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
Always use size_t (instead of converting to an uint32_t) in order to
correctly support large datatypes.
Thanks Ben Menadue for the initial bug report
Refs open-mpi/ompi#6016
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
Though not a recommended configuration it is possible to use Open MPI
over UCX over uGNI. This configuration had some issues related to the
connection management and tl selection. This commit fixes those
issues.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
If UCX is available, then pml/ucx will be used instead of
pml/ob1 + btl/openib, so there is no need to warn about
btl/openib not supporting Infiniband.
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
Add the --pset option for app_contexts so the user can provide a string
name for each app_context. Use the new PMIx pset attribute to store the
names in the PMIx local storage for retrieval
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
Now Open MPI requires a C99 compiler. Checking availability of
the following types is no more needed.
- `long long` (`signed` and `unsigned`)
- `long double`
- `float _Complex`
- `double _Complex`
- `long double _Complex`
Furthermore, the `#if HAVE_[TYPE]` style checking is not correct.
Availability of C types is checked by `AC_CHECK_TYPES` in `configure.ac`.
`AC_CHECK_TYPES` defines macro `HAVE_[TYPE]` as `1` in `opal_config.h`
if the `[TYPE]` is available. But it does not define `HAVE_[TYPE]`
(instead of defining as `0`) if it is not available. So even if we
need `HAVE_[TYPE]` checking, it should be `#if defined(HAVE_[TYPE])`.
I didn't remove `AC_CHECK_TYPES` for these types in `configure.ac`
since someone may use `HAVE_[TYPE]` macros somewhere.
Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
It seems in some cases (gcc older than v6.0.0) the __atomic_thread_fence is a
no-op with __ATOMIC_ACQUIRE. This appears to be the case with X86_64 so go
ahead and use __ATOMIC_SEQ_CST for the x86_64 read memory barrier. This should
not cause any performance issues as it is equivalent to the memory barrier
in the hand-written atomics.
References #6014
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
This commit added MCA param `opal_max_thread_in_progress` to set the
number of threads allowed to do opal_progress concurrently. The default
value is 1.
Component with multithreaded design can benefit from this change to
parallelize their component progress function.
Signed-off-by: Thananon Patinyasakdikul <tpatinya@utk.edu>
Under certain circumstances, ibv_exp_query_device was
returning an error due to uninitialized fields in the
extended attributes struct.
Fixes: #5810Fixes: #5914
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
In 457f058 I broke the TCP BTL with --enable-ipv6. This patch
fixes the compile error, so IPv6 works again.
Fixed#5996
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
* Needed to properly read PMIx job data like the following
- `OPAL_PMIX_LOCALLDR`
- `OPAL_PMIX_RANK`
- `OPAL_PMIX_GLOBAL_RANK`
- `OPAL_PMIX_APPLDR`
- `OPAL_PMIX_APP_RANK`
Signed-off-by: Joshua Hursey <jhursey@us.ibm.com>
Only default to the external component if its version is
greater or equal than the internal libevent (2.0.22)
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
- Always use the external component when configure'd with --with-libevent=external
- Fix the external libevent library version detection
by testing _EVENT_NUMERIC_VERSION and EVENT__NUMERIC_VERSION macros
- Use the event2/event.h header (event.h is deprecated since libevent 2.0
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
AC_CHECK_DECLS take a comma separated list of macros/symbols,
so replace the whitespace separator with a comma.
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
The monitoring PML hides it's existence from the OMPI infrastructure by
removing itself from the list of PML loaded components, remaining hidden
until MPI_Finalize.
Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
Simplify selection of the address to publish for a given BTL TCP
module in the module exchange code. Rather than looping through
all IP addresses associated with a node, looking for one that
matches the kindex of a module, loop over the modules and
use the address stored in the module structure. This also
happens to be the address that the source will use to bind()
in a connect() call, so this should eliminate any confusion
(read: bugs) when an interface has multiple IPs associated with
it.
Refs #5818
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
Today, a btl tcp module is associated with exactly one IP
address (IPv4 or IPv6). There's no need to reserve space
for both an IPv4 and IPv6 address in the module structure,
since the module will only be associated with one or the
other.
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
Work around a race condition in the TCP BTL's proc setup code.
The Cisco MTT results have been failing on TCP tests due to a
"dropped connection" message some percentage of the time.
Some digging shows that the issue happens in a combination of
multiple NICs and multiple threads. The race is detailed in
https://github.com/open-mpi/ompi/issues/3035#issuecomment-429500032.
This patch doesn't fix the race, but avoids it by forcing
the MPI layer to complete all calls to add_procs across the
entire job before any process leaves MPI_INIT. It also
reduces the scalability of the TCP BTL by increasing start-up
time, but better than hanging.
The long term fix is to do all endpoint setup in the first
call to add_procs for a given remote proc, removing the
race. THis patch is a work around until that patch can
be developed.
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
This commit fixes a deadlock that can occur when using a TL that
supports the connect to endpoint model. The deadlock was occurring
while processing an incoming connection requests. This was done from
an active-message callback. For some unknown reason (at this time)
this callback was sometimes hanging. To avoid the issue the connection
active-message is saved for later processing.
At the same time I cleaned up the connection code to eliminate
duplicate messages when possible.
This commit also fixes some bugs in the active-message send path:
- Correctly set all fragment fields in prepare_src.
- Fix bug when using buffered-send. We were not reading the return
code correctly (which is in bytes). This resulted in a message
getting sent multiple times.
- Don't try to progress sends from the btl_send function when in an
active-message callback. It could lead to deep recursion and an
eventual crash if we get a trace like
send->progress->am_complete->ob1_callback->send->am_complete...
Closes#5820Closes#5821
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
There was a race condition in opal_free_list_get. Code throughout the
Open MPI codebase was assuming that a NULL return from this function
was due to an out-of-memory condition. In some cases this can lead to
a fatal condition (MPI_Irecv and MPI_Isend in pml/ob1 for
example). Before this commit opal_free_list_get_mt looked like this:
```c
static inline opal_free_list_item_t *opal_free_list_get_mt (opal_free_list_t *flist)
{
opal_free_list_item_t *item =
(opal_free_list_item_t*) opal_lifo_pop_atomic (&flist->super);
if (OPAL_UNLIKELY(NULL == item)) {
opal_mutex_lock (&flist->fl_lock);
opal_free_list_grow_st (flist, flist->fl_num_per_alloc);
opal_mutex_unlock (&flist->fl_lock);
item = (opal_free_list_item_t *) opal_lifo_pop_atomic (&flist->super);
}
return item;
}
```
The problem is in a multithreaded environment is *is* possible for the
free list to be grown successfully but the thread calling
opal_free_list_get_mt to be left without an item. The happens if
between the calls to opal_lifo_push_atomic in opal_free_list_grow_st
and the call to opal_lifo_pop_atomic other threads pop all the items
added to the free list.
This commit fixes the issue by ensuring the thread that successfully
grew the free list **always** gets a free list item.
Fixes#2921
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
This reverts commit 6acebc40a1.
This patch is causing numerous "Socket closed" messages which are
causing most of the failures on Cisco's MTT run. See
https://github.com/open-mpi/ompi/issues/5849 for more information.
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
Looks like a filename was missed when pmix sucked in the installdirs
framework. Fixing the typo fixes "make ctags" and "make cscope".
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
It is apparently possible for different instances of the same UCT
transport to have different limits (max short put for example). To
account for this we need to store the attributes per TL context not
per TL. This commit fixes the issue.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
While trying to debug #3035, it's not clear whether there is
an issue with the modex data or printing the address list.
Print the number of endpoints on the error, which will help
determine which case is happening to Cisco.
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
When creating TCP BTL modules, print more information about the
module's ethernet association, including the first address associated
with the device, as debug output.
Fix a flipped output string for IPv4 and IPv6 addresses in the
modex send code.
Add the addresses being published in the modex to the debugging
output in modex send, to help match failures in endpoint match.
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
This commit updates the uct btl to change the transports parameter
into a priority list. The dc_mlx5, rc_mlx5, and ud transports to the
priority list. This will give better out of the box performance for
multi-threaded codes beacuse the *_mlx5 transports can avoid the mlx5
lock inside libmlx5_rdmav2.
This commit also fixes a number of leaks and a possible deadlock when
using RDMA.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
The Open MPI code base assumed that asprintf always behaved like
the FreeBSD variant, where ptr is set to NULL on error. However,
the C standard (and Linux) only guarantee that the return code will
be -1 on error and leave ptr undefined. Rather than fix all the
usage in the code, we use opal_asprintf() wrapper instead, which
guarantees the BSD-like behavior of ptr always being set to NULL.
In addition to being correct, this will fix many, many warnings
in the Open MPI code base.
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
Open MPI's developers like to assume that asprintf() always sets
the ptr to NULL on error, but the standard (and Linux glibc) do
not guarantee this. As a result, we're making opal_asprintf()
always available for developers, which will guarantee that
ptr is set to NULL on error.
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
If we are using the internal PMIx component and the embedded library fails to configure, then fail - don't silently fail to build and then fail in execution
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
We only need to pass a custom range if the target is a single process.
Otherwise, we let the range be "session".
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
This commit works around an Oracle C compiler bug in 5.15 (not sure
when it was introduced). The bug is triggered when we chain
assignments of atomic variables. Ex:
_Atomic intptr x, y;
intptr_t z = 0;
x = y = z;
Will produce a compiler error of the form:
operand cannot have void type: op "="
assignment type mismatch:
long "=" void
To work around the issue we are removing the chain assignment and
setting the head and tail on different lines.
Fixes#5814
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
On some platfoms reading a 64-bit value is non-atomic and it is
possible that the two 32-bit values are read in the wrong order. To
ensure the tag is always read first this commit reads the tag before
reading the full 64-bit value.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
Remove the pack/unpack pragma around net/if.h on MacOS, which
was added to fix a bug in MacOS X 10.4.x on 64-bit platforms.
The bug was fixed in Mac OS X 10.5.0 and, sometime in the last
11 years, compilers started emitting warnings about the fact
that the Apple header stomped over the pragma pack settings
from the workaround. We already don't support versions of MacOS
earlier than 10.5, so there's no point in keeping the workaround.
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
Open MPI doesn't support any transports on MacOS which require
memory manager hooks. The memory patcher component uses the
syscall interface, which has been deprecated in recent versions
of MacOS. Since we don't need it and it emits warnings about
deprecation, disable the memory patcher component on MacOS.
Fixes#5671
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
Get Brian's patch from #5825 and his log message:
Fix a failure in binding the initiating side of a connection
on MacOS. MacOS doesn't like passing the size of the storage
structure (sockaddr_storage) instead of the expected size of
the structure (sockaddr_in or sockaddr_in6), which was causing
bind() failures. This patch simply changes the structure size
to the expected size.
Add a more clear error message in debug mode.
Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
Per
https://github.com/open-mpi/ompi/issues/3035#issuecomment-426085673,
it looks like the IP address for a given interface is being stashed in
two places: on the endpoint and on the module.
1. On the endpoint, it is storing the moral equivalent of a
(struct sockaddr_in.sin_addr).
2. On the module, it is storing a full (struct sockaddr_storage).
The call to opal_net_get_hostname() expects a full (struct sockaddr*)
-- not just the stripped-down (struct sockaddr_in.sin_addr). Hence,
when the original code was passing in the endpoint's (struct
sockaddr_in.sin_addr) and opal_net_get_hostname() was treating it
like a (struct sockaddr), hilarity ensued (i.e., we got the wrong
output).
This commit eliminates the call to opal_net_get_hostname() and just
calls inet_ntop() directly to convert the (struct
sockaddr_in.sin_addr) to a string.
NOTE: Per the github comment cited above, there can be a disparity
between the IP address cached on the endpoint vs. the IP address
cached on the module. This only happens with interfaces that have
more than one IP address. This commit does not fix that issue.
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
Add a hueristic: if the string copy is "too long", fail an assert().
This is based on the premise that Open MPI doesn't do large string
copies. So if we see a dest_len that is over a certain threshhold
(currently set at 128K), this is likely a programmer error, and on
debug builds, we should fail an assert(). In production builds, it
will work just fine (assuming that it's not a programmer error).
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
In many cases, this was a simple string replace. In a few places, it
entailed:
1. Updating some comments and removing now-redundant foo[size-1]='\0'
statements.
2. Updating passing (size-1) to (size) (because opal_string_copy()
wants the entire destination buffer length).
This commit actually fixes a bunch of potential (yet quite unlikely)
bugs where we could have ended up with non-null-terminated strings.
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
Do essentially the same thing as strncpy(3), but a) ensure to always
terminate the destination buffer with a \0, and b) do not \0-pad to
the right.
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
Fix the test that determined whether we output "writeable" or
"read-only" for MCA vars (it was checking the wrong flag).
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
Disable async receive for CUDA under OpenIB. While a performance
optimization, it also causes incorrect results for transfers
larger than the GPUDirect RDMA limit. This change has been validated
and approved by Akshay.
References #3972
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
This can be returned when running on QEMU user-mode emulation,
which does not support getsockopt with SO_RCVTIMEO.
Signed-off-by: Michael Kuron <mkuron@icp.uni-stuttgart.de>
According to clang on MacOS, passing a bool parameter -- which
undergoes default parameter promotion -- to va_start() results in
undefined behavior. So just change these params to int and avoid the
issue.
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
