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Граф коммитов

857 Коммитов

Автор SHA1 Сообщение Дата
Jeff Squyres
e9980654a8 nbc ireduce_scatter_block: ensure to check the correct return code
This was CID 1196643 and 1196615
2015-02-24 15:24:11 -05:00
Jeff Squyres
b35eb6fe10 nbc ireduce_scatter_block: ensure to check the correct return code
This was CID 709594 and 709592
2015-02-24 15:24:10 -05:00
Jeff Squyres
b0acef6f2d nbc_ireduce_scatter: ensure to check the proper return code
This was CID 709229 and 709224.
2015-02-24 15:24:10 -05:00
Jeff Squyres
1cf197d771 coll_basic_barrier: guard against opal_hibit() returning -1
This was CID 1196606 and 1196607
2015-02-24 15:24:08 -05:00
Nathan Hjelm
5f1254d710 Update code base to use the new opal_free_list_t
Use of the old ompi_free_list_t and ompi_free_list_item_t is
deprecated. These classes will be removed in a future commit.

This commit updates the entire code base to use opal_free_list_t and
opal_free_list_item_t.

Notes:

OMPI_FREE_LIST_*_MT -> opal_free_list_* (uses opal_using_threads ())

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-02-24 10:05:45 -07:00
Howard Pritchard
c9e81b54fb Merge pull request #412 from hppritcha/topic/owner_files
add owner files to opa/ompi/orte mca directories
2015-02-23 09:48:20 -07:00
Howard Pritchard
61fb62499a hcoll belongs to MLNX and is active 2015-02-23 09:14:03 -07:00
Gilles Gouaillardet
004160f8da coll/tuned: silence CID 1269934 2015-02-23 13:45:23 +09:00
Howard Pritchard
bf89131f9e add owner files to opa/ompi/orte mca directories
This commit adds an owner file in each of the component directories
for each framework.  This allows for a simple script to parse
the contents of the files and generate, among other things, tables
to be used on the project's wiki page.  Currently there are two
"fields" in the file, an owner and a status.  A tool to parse
the files and generate tables for the wiki page will be added
in a subsequent commit.
2015-02-22 15:10:23 -07:00
Igor Ivanov
010dce307a Fix set of coverity issues
List of CIDs (scan.coverity.com):
oshmem:
1269787, 1269907, 1270161, 1270162, 1270977, 1270978
ompi:
1270170, 1270172, 1270173

Signed-off-by: Igor Ivanov <Igor.Ivanov@itseez.com>
2015-02-20 17:45:46 +04:00
Gilles Gouaillardet
bda8058f39 coll/tuned: fix memory leaks and misc issues
as reported by Coverity with CIDs
70132, 70265, 70267, 70268, 70322, 70400, 70580, 70615,
1269934, 1269944, 1269968, 1269982, 1269983
2015-02-18 16:29:42 +09:00
Jeff Squyres
27a783b1c3 coll_sm_barrier: remove dead code
This was CID 1269978.
2015-02-12 10:24:02 -08:00
Rolf vandeVaart
1f749b0224 Bump priority of coll cuda component so it is higher than self.
Otherwise, get some odd interactions with coll self in CUDA-aware
builds.
2015-02-12 12:29:03 -05:00
Jeff Squyres
a1c521f968 We're .opal_ignore these days, not .ompi_ignore. :-) 2015-02-03 13:56:53 -08:00
Jeff Squyres
30f05bc966 Makefiles: remove unused macros 2015-01-31 04:51:25 -08:00
George Bosilca
7adf74c617 As discussed on the devel mailing list in
http://www.open-mpi.org/community/lists/devel/2015/01/16820.php,
coll ML has two pending issues: a deadlock and a performance critical
on every communicator creation. After confirmation over IM from
Pasha, the ML collective module will be disabled until it is
fixed. Token to Pasha.
2015-01-27 16:27:12 -05:00
Jeff Squyres
2d5b92157f hierarch: with Edgar's blessing, remove the coll hierarch module 2015-01-27 13:25:27 -06:00
Devendar Bureddy
036e687d9c HCOLL: Do not block hcoll progress in finalize 2015-01-27 17:01:00 +02:00
Gilles Gouaillardet
8c1698ae4a coll/libnbc: enhance fix for MPI_Ireduce_scatter on single task communicator
this improves open-mpi/ompi@b9349d2eb9
2015-01-09 13:44:01 +09:00
Devendar Bureddy
e732152304 HCOLL: Fix hcoll supported datatype checks corretcly 2015-01-02 21:18:12 +02:00
Gilles Gouaillardet
b9349d2eb9 coll/libnbc: fix MPI_Ireduce_scatter for single task communicator
when MPI_IN_PLACE is not used.

that commit fixes a regression introduced
open-mpi/ompi@49e79a9ade
2014-12-24 12:12:58 +09:00
Devendar Bureddy
e398ad6619 HCOLL: Fix OMPI to HCOLL predefined datatypes, Ops mapping 2014-12-23 22:30:29 +02:00
Rolf vandeVaart
3ec9685ee0 Add missing file to sources. Without this, tarball build does not work 2014-12-18 07:17:28 -08:00
George Bosilca
d622db783d Based on https://github.com/open-mpi/ompi/pull/262, we should use
true_lb while computing the lower bound.
2014-11-21 19:16:05 +09:00
Gilles Gouaillardet
705147e98b coll/tuned: fix allgather bruck algorithm 2014-11-21 19:16:05 +09:00
Ralph Castain
780c93ee57 Per the PR and discussion on today's telecon, extend the process name definition as a two-field struct of uint32_t's down to the OPAL layer. This resolves issues created by prior commits that impacted both heterogeneous and SPARC support. This also simplifies the OMPI code base by removing the need for frequent memcpy's when transitioning between the OMPI/ORTE layers and OPAL.
We recognize that this means other users of OPAL will need to "wrap" the opal_process_name_t if they desire to abstract it in some fashion. This is regrettable, and we are looking at possible alternatives that might mitigate that requirement. Meantime, however, we have to put the needs of the OMPI community first, and are taking this step to restore hetero and SPARC support.
2014-11-11 17:00:42 -08:00
bosilca
e7c59e3adb Merge pull request #227 from ggouaillardet/rfc/coll_basic_neighbor
RFC/coll basic neighbor
2014-11-07 11:33:25 -05:00
Gilles Gouaillardet
64c18686b7 fix ompi_request_wait vs ompi_request_wait_all and
MPI_STATUS_IGNORE vs MPI_STATUSES_IGNORE
2014-11-04 12:16:30 +09:00
Jeff Squyres
c22e1ae33b configury: new OPAL_SET_LIB_PREFIX/ORTE_SET_LIB_PREFIX macros
These two macros set the prefix for the OPAL and ORTE libraries,
respectively.  Specifically, the OPAL library will be named
libPREFIXopen-pal.la and the ORTE library will be named
libPREFIXopen-rte.la.

These macros must be called, even if the prefix argument is empty.

The intent is that Open MPI will call these macros with an empty
prefix, but other projects (such as ORCM) will call these macros with
a non-empty prefix.  For example, ORCM libraries can be named
liborcm-open-pal.la and liborcm-open-rte.la.

This scheme is necessary to allow running Open MPI applications under
systems that use their own versions of ORTE and OPAL.  For example,
when running MPI applications under ORTE, if the ORTE and OPAL
libraries between OMPI and ORCM are not identical (which, because they
are released at different times, are likely to be different), we need
to ensure that the OMPI applications link against their ORTE and OPAL
libraries, but the ORCM executables link against their ORTE and OPAL
libraries.
2014-10-22 10:32:19 -07:00
bosilca
d819939841 Merge pull request #233 from ggouaillardet/rfc/coll_module_disable
Provide a symmetric behavior for the activation/deactivation of collective modules.
2014-10-16 09:22:04 -04:00
George Bosilca
7541c03b4c Mark all instances where atomic operations are used but their return value is unnecessary 2014-10-15 21:47:32 -04:00
Gilles Gouaillardet
e3f74aca1c Correctly mote the pointer back by the true_lb.
Fixes #231
2014-10-14 16:26:54 +09:00
Gilles Gouaillardet
0f983d5a4f add a disable function for coll module 2014-10-14 14:46:36 +09:00
Devendar Bureddy
7a6b4c36b0 HCOLL: Update the proc structure dereference
Update the proc structure dereference to reflect the new opal_proc_t
super field
2014-10-13 20:49:19 +03:00
Devendar Bureddy
b8d2a15be9 HCOLL: by default off 2014-10-13 20:49:09 +03:00
Gilles Gouaillardet
8eb2d62919 coll/sm: fix an other memory leak 2014-10-10 19:54:45 +09:00
Gilles Gouaillardet
27e4389259 * comment on communicator creation in mca_topo_base_dist_graph_create(...)
* use accesors to retrieve topo info
2014-10-10 16:07:20 +09:00
Gilles Gouaillardet
5d44a30111 coll/sm: fix minor memory leaks
port 4488.1.patch attached in #196 to master
2014-10-10 14:21:34 +09:00
Gilles Gouaillardet
76204dfafe coll/basic: fix segmentation fault in neighborhood collectives if the degree
of the topology is higher than the communicator size

It is possible to have a topology degree higher than the size of the communicator.
For example, a periodic cartesian communicator on MPI_COMM_SELF. This will leave
the neighborhood collectives with a request buffer that is too small.

This commits introduces a semantic change :
from now, c_topo must be set before invoking coll_select
2014-10-10 11:56:04 +09:00
Gilles Gouaillardet
2f67f29b85 Revert "coll/basic: fix segmentation fault in neighborhood collectives if the degree"
This reverts commit 9c788ff940.
2014-10-10 11:29:06 +09:00
Howard Pritchard
bb65835816 Fix iallgather problem with intercommunicators
A problem was found with the libnbc MPI_Iallgather
routine when using intercommunicators.  Special
thanks to Takahiro Kawashima(Fujitsu) for the patch
and a test case.  Verified master fails without the
patch and the test passes with the patch applied.

fixes #219
2014-10-02 11:45:17 -06:00
Howard Pritchard
0f74467264 switch to ompi_mpi_thread_provided for ts check
Use ompi_mpi_thread_provided rather than opal_using_threads macro
to check whether MPI_THREAD_MULTIPLE is being used.

This commit was SVN r32815.
2014-09-29 22:20:35 +00:00
Howard Pritchard
7069f2361a disqualify coll ml for MPI_THREAD_MULTIPLE
This commit was SVN r32814.
2014-09-29 21:02:15 +00:00
George Bosilca
49e79a9ade Fix the case of a single process.
This commit was SVN r32807.
2014-09-28 22:06:39 +00:00
Nathan Hjelm
9c788ff940 coll/basic: fix segmentation fault in neighborhood collectives if the degree
of the topology is higher than the communicator size

It is possible to have a topology degree higher than the size of the communicator.
For example, a periodic cartesian communicator on MPI_COMM_SELF. This will leave
the neighborhood collectives with a request buffer that is too small. This commit
adds a call that will dynamically increase the size of the request buffer if it
is too small.

A better fix would be to create the topology *before* calling the coll_select
routine on a communicator. This will take some discussion and the solution will
not likely be ready anytime soon.

Thanks to Lisandro Dalcin for reporting this.

Original thread: http://www.open-mpi.org/community/lists/devel/2014/08/15713.php

cmr=v1.8.3:reviewer=jsquyres

This commit was SVN r32796.
2014-09-25 17:43:29 +00:00
Rolf vandeVaart
5c73101a72 Fix typo.
This commit was SVN r32755.
2014-09-18 13:58:54 +00:00
Vasily Filipov
c7c63fe73e COLL/TUNED: alltoall - return previous default values of algorithm choosing decision thresholds (were changed by r32735)
reviewed by miked
    cmr=v1.8.3:reviewer=ompi-rm1.8

This commit was SVN r32753.

The following SVN revision numbers were found above:
  r32735 --> open-mpi/ompi@5fecf65daf
2014-09-18 08:07:51 +00:00
Rolf vandeVaart
8db1f89dd1 Small change to allow CUDA-aware to work with non-reduction nonblocking collectives.
Only used when CUDA-aware feature compiled in.

This commit was SVN r32750.
2014-09-17 16:55:01 +00:00
Vasily Filipov
ff10b25e7d warnings (caused by commit r32735) fix.
reviewed by miked
    cmr=v1.8.3:reviewer=ompi-rm1.8 

This commit was SVN r32740.

The following SVN revision numbers were found above:
  r32735 --> open-mpi/ompi@5fecf65daf
2014-09-16 06:33:49 +00:00
Vasily Filipov
5fecf65daf OMPI/COLL/Tuned: add command line params for thresholds to decide if small/intermediate MSGs alltoall algorithm will be used.
cmr=v1.8.3:reviewer=miked

This commit was SVN r32735.
2014-09-15 12:34:21 +00:00
Gilles Gouaillardet
edfbeba7bf coll/ml: better error handling
when CHECK_AND_RECYCLE detects an error, a message is displayed
if the error occurs on an intrinsic communicator, then abort
the program (instead of trying to free the communicator)

cmr=v1.8.3:reviewer=hjelmn

This commit was SVN r32659.
2014-09-01 10:00:49 +00:00
Ralph Castain
b554cd7d86 Turn off the coll/ml component if --without-hwloc was given
cmr=v1.8.3:reviewer=jsquyres

This commit was SVN r32621.
2014-08-27 20:25:39 +00:00
Rolf vandeVaart
8709071819 Fix missing help file.
This commit was SVN r32550.
2014-08-18 21:52:31 +00:00
Gilles Gouaillardet
22cb8a1834 check-help-strings cleanup
This commit was SVN r32497.
2014-08-11 03:27:45 +00:00
Mike Dubman
0f60c34a9f fca: adopt opal API refactoring, fix warning.
based on http://www.open-mpi.org/community/lists/devel/2014/08/15558.php

This commit was SVN r32484.
2014-08-09 15:50:51 +00:00
Ralph Castain
e95187514c Update the proc structure dereference to reflect the new opal_proc_t super field
This commit was SVN r32462.
2014-08-08 16:12:49 +00:00
Jeff Squyres
132375f07f helpfiles: fix filenames referenced by calls to show_help()
This commit was SVN r32453.
2014-08-08 13:34:15 +00:00
Ralph Castain
5f244e8b19 Use opal_getpagesize to get the proper page size
Refs trac:4826

This commit was SVN r32422.

The following Trac tickets were found above:
  Ticket 4826 --> https://svn.open-mpi.org/trac/ompi/ticket/4826
2014-08-04 20:23:00 +00:00
Gilles Gouaillardet
5b1ae87c76 coll/ml: fix ML_ERROR/printf parameters
cmr=v1.8.2:reviewer=hjelmn

This commit was SVN r32409.
2014-08-04 04:05:59 +00:00
Ralph Castain
daeb9b6c4f Some more cleanups. Remove direct references to ORTE by changing OMPI_CAST_ORTE_NAME -> OMPI_CAST_RTE_NAME. Ensure that ORTE tools (mpirun, orted, tools) set the OPAL proc structure fields so OPAL knows what is going on and uses the correct print functions (still need to fix the problem for non-MPI apps). Properly return uint32_t from the opal utilities instead of int32_t as that is what the ORTE process name fields contain.
Thanks to Gilles for pointing out some of the discrepancies.

This commit was SVN r32398.
2014-08-01 14:44:11 +00:00
Gilles Gouaillardet
cd8fa75f87 coll/ml: align on page size as returned by sysconf
Thanks to Paul Hargrove for pointing into the right direction

cmr=v1.8.2:reviewer=hjelmn

This commit was SVN r32393.
2014-08-01 08:10:12 +00:00
Nathan Hjelm
1407c1f501 Remove RML code from common/sm
The only user of this code was coll/sm. I implemented a basic replacement
for the removed code. This gets the trunk compiling again with
--disable-dlopen.

This commit was SVN r32333.
2014-07-28 22:00:12 +00:00
Ryan Grant
caa10a5faf Portals fixes after latest move
This commit was SVN r32330.
2014-07-28 19:25:03 +00:00
Ralph Castain
552c9ca5a0 George did the work and deserves all the credit for it. Ralph did the merge, and deserves whatever blame results from errors in it :-)
WHAT:    Open our low-level communication infrastructure by moving all necessary components (btl/rcache/allocator/mpool) down in OPAL

All the components required for inter-process communications are currently deeply integrated in the OMPI layer. Several groups/institutions have express interest in having a more generic communication infrastructure, without all the OMPI layer dependencies.  This communication layer should be made available at a different software level, available to all layers in the Open MPI software stack. As an example, our ORTE layer could replace the current OOB and instead use the BTL directly, gaining access to more reactive network interfaces than TCP.  Similarly, external software libraries could take advantage of our highly optimized AM (active message) communication layer for their own purpose.  UTK with support from Sandia, developped a version of Open MPI where the entire communication infrastucture has been moved down to OPAL (btl/rcache/allocator/mpool). Most of the moved components have been updated to match the new schema, with few exceptions (mainly BTLs where I have no way of compiling/testing them). Thus, the completion of this RFC is tied to being able to completing this move for all BTLs. For this we need help from the rest of the Open MPI community, especially those supporting some of the BTLs.  A non-exhaustive list of BTLs that qualify here is: mx, portals4, scif, udapl, ugni, usnic.

This commit was SVN r32317.
2014-07-26 00:47:28 +00:00
Devendar Bureddy
74852b4d21 HCOLL: fix misplaced hcoll_init return value check.
cmr=v1.8.2:reviewer=jladd

This commit was SVN r32282.
2014-07-22 18:47:34 +00:00
Mike Dubman
e342a11c2e opal envlist mca: implement Jeff`s quibbles
fixed by Elena, reviewed by Miked

This commit was SVN r32216.
2014-07-11 07:23:20 +00:00
Nathan Hjelm
56ad231b7c coll/ml: temporarily disable binding check
This commit was SVN r32178.
2014-07-09 14:39:49 +00:00
Joshua Ladd
057370364d Opal: Add a new MCA variable type "version_string". Also add a
new flag to ompi_info that allows a user to print all MCA variables of a specific type.  

 --type version_string

This command will print all MCA variables of type version_string.

This feature was developed by Elena Shipunova and was reviewed by Josh Ladd.

This commit was SVN r32166.
2014-07-09 01:37:23 +00:00
Nathan Hjelm
309a6cf951 coll/ml: set n_resources to 0 when destructing an lmngr
Also keep track of the allocation base so we free the correct pointer
when cleaning up.

cmr=v1.8.2:reviewer=manjugv

This commit was SVN r32151.
2014-07-07 15:11:26 +00:00
George Bosilca
843ef1fcb0 ompi_mpi_abort had one extra argument that was never used. Clean it up.
This commit was SVN r32124.
2014-07-03 00:34:44 +00:00
Mike Dubman
ce6d5b8cd7 HCOLL: make it OFF by default
fixed by miked, reviewed by Alex

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r32101.
2014-06-28 18:45:03 +00:00
Devendar Bureddy
228772ae81 hcoll gatherv support
cmr=v1.8.2:reviewer=jladd

This commit was SVN r32097.
2014-06-26 18:14:41 +00:00
George Bosilca
99561c5cc1 If the enable fails don't give up, but instead keep going with
the other collective modules. If we endup without some of the
collective the code will raise an error anyway.

cmr=v1.8.2:reviewer=hjelmn

This commit was SVN r32096.
2014-06-26 15:52:45 +00:00
Gilles Gouaillardet
fae7adf8ee Remove legacy FCA_IS_LOCAL_PROCESS macro
and use OPAL_PROC_ON_LOCAL_NODE instead

cmr=v1.8.2:reviewer=rhc

This commit was SVN r32079.
2014-06-25 02:37:53 +00:00
Gilles Gouaillardet
e9ed9def02 Fix MPI_Alltoallv in coll/tuned
This changeset :
- always call the low/level implementation for :
  * MPI_Alltoallv
  * MPI_Neighbor_alltoallv
  * MPI_Alltoallw
  * MPI_Neighbor_alltoallv
- fix mca_coll_tuned_alltoallv_intra_basic_inplace
  so zero size types are correctly handled

cmr=v1.8.2:reviewer=bosilca:ticket=4715

This commit was SVN r32013.

The following Trac tickets were found above:
  Ticket 4715 --> https://svn.open-mpi.org/trac/ompi/ticket/4715
2014-06-17 06:11:34 +00:00
George Bosilca
542e4996a7 Cleanup the utilities functions in tuned.
This commit was SVN r31987.
2014-06-13 16:04:45 +00:00
Gilles Gouaillardet
50256c62c5 Fix MPI_Alltoallv in coll/tuned.
Correctly handle the corner case in MPI_Alltoallv when
some tasks have no data to transfer and some other tasks
do have data to transfer.

This test case is covered in ibm/collective/alltoallv_somezeros
from the ompi-tests repo.

cmr=v1.8.2:reviewer=bosilca

This commit was SVN r31985.
2014-06-13 06:03:23 +00:00
Rolf vandeVaart
489664b4a9 Remove debug code.
This commit was SVN r31901.
2014-05-28 16:06:16 +00:00
Rolf vandeVaart
570e313c9b Add collective module to handle CUDA aware buffers and reductions. Per RFC sent last week.
Reviewed by bosilca.

This commit was SVN r31894.
2014-05-27 21:24:43 +00:00
Mike Dubman
7b05b5c4c2 HCOLL: use proper parameter in progress unregister
fixed by Nadezhda, reviewed by Elena/MikeD

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31891.
2014-05-26 09:03:30 +00:00
Gilles Gouaillardet
baf532087a Fix mca_coll_basic_alltoallw_inter()
Avoid sending/receiving zero size messages in order to be compliant
with the top-level modification

cmr=v1.8.2:ticket=4651:reviewer=bosilca

This commit was SVN r31836.

The following Trac tickets were found above:
  Ticket 4651 --> https://svn.open-mpi.org/trac/ompi/ticket/4651
2014-05-20 09:22:57 +00:00
Gilles Gouaillardet
8bafe06c57 Fixes *alltoall* collectives at top level
This commit :
 - Correctly retrieve the communicator size when
   checking memory and parameters
 - Ensure (sendtype,sendcount) and (recvtype,recvcount)
   matches and return with MPI_ERR_TRUNCATE otherwise
 - Return with MPI_SUCCESS without invoking the low level
   if no data is going to be transferred
 - Fixes trac:4506

cmr=v1.8.2:reviewer=bosilca

This commit was SVN r31815.

The following Trac tickets were found above:
  Ticket 4506 --> https://svn.open-mpi.org/trac/ompi/ticket/4506
2014-05-19 07:46:07 +00:00
Mike Dubman
cadc1485ff HCOLL: register memory release hook to avoid races
fixed by Devender, reviewed by Miked

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31809.
2014-05-17 19:49:43 +00:00
Nathan Hjelm
c32d84154a coll/ml: fix leaks and close all the framework opened
It is essential to call mca_base_framework_close for every framework
that is opened. coll/ml was not doing this so neither bcol nor sbgp
were getting cleaned up. This commit fixes this omission.

Also fixed a leak caused by calling OBJ_DESTRUCT for something created
with OBJ_NEW. With these changes coll/ml appears to be valgrind clean.

cmr=v1.8.2:reviewer=manjugv

This commit was SVN r31743.
2014-05-13 21:22:12 +00:00
Gilles Gouaillardet
e3df77548d Fix memory leak when releasing a communicator created by
MPI_Cart_Create/MPI_Graph_create/MPI_Dist_Graph

Fixes trac:4581

This commit was SVN r31716.

The following Trac tickets were found above:
  Ticket 4581 --> https://svn.open-mpi.org/trac/ompi/ticket/4581
2014-05-13 04:49:23 +00:00
Ralph Castain
11faab1091 The final step of the RFC: convert the <foo>libdir and friends to fit their respective code areas, and equate them all at the top. Note that we can't entirely separate things as the opal_install_dirs framework can't handle separated locations for the various trees.
This commit was SVN r31679.
2014-05-08 02:01:35 +00:00
Ralph Castain
a8e2d6c3a6 The bulk of the remaining renaming changes, in one final glorious "blob". Thanks to Jeff for some help chasing down a few spots. Per chat with Jeff, we decided to cleanup a few things that were historical in nature:
top_ompi_srcdir  ->  OMPI_TOP_SRCDIR
top_ompi_builddir -> OMPI_TOP_BUILDDIR

We also split the srcdir/builddir flags according to their local tree (e.g., OPAL_TOP_SRCDIR), and tied them all together in configure.ac. Renamed ompi_ignore and ompi_unignore to be opal_<foo> as these are agnostic markers.

Only thing left is ompilibdir being treated similar to what we dif for srcdir/builddir. Coming soon.

This commit was SVN r31678.
2014-05-07 21:48:53 +00:00
Devendar Bureddy
dfaac7d29d Do not call into hcoll progress after MPI_Finalize
Reviewed by Mike
cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31639.
2014-05-05 22:46:39 +00:00
Jeff Squyres
64c1228b55 Roll back r31519 and r31521: George convinced us that these approaches
weren't right.

This commit was SVN r31528.

The following SVN revision numbers were found above:
  r31519 --> open-mpi/ompi@b449c750b7
  r31521 --> open-mpi/ompi@e243805ed8
2014-04-24 20:27:03 +00:00
Jeff Squyres
e243805ed8 coll tuned alltoallv: correctly handle 0-sized messages with MPI_IN_PLACE
Patch from Gilles Gouaillardet on #4517 to fix handling 0-sized
messages in coll tuned with MPI_ALLTOALLV and MPI_IN_PLACE.

Reviewed by Jeff Squyres.

Fixes trac:4517

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31521.

The following Trac tickets were found above:
  Ticket 4517 --> https://svn.open-mpi.org/trac/ompi/ticket/4517
2014-04-24 16:55:53 +00:00
Jeff Squyres
b449c750b7 coll basic: correctly handle alltoall[vw] 0-sized messages
Patch from Gilles Gouaillardet on #4506 to correctly handle 0-sized
messages in coll/basic MPI_Alltoallv and MPI_Alltoallw.

Reviewed by Jeff Squyres.

Fixes trac:4506.

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31519.

The following Trac tickets were found above:
  Ticket 4506 --> https://svn.open-mpi.org/trac/ompi/ticket/4506
2014-04-24 16:25:43 +00:00
Jeff Squyres
e9b694f1d8 coll_base_comm_unselect.c: fix memory leaks
Ensure to also OBJ_RELEASE the neightbor and ineighbor modules.

Fixes trac:4444 (this patch is from that ticket).

This commit was SVN r31516.

The following Trac tickets were found above:
  Ticket 4444 --> https://svn.open-mpi.org/trac/ompi/ticket/4444
2014-04-24 15:53:06 +00:00
Mike Dubman
a4990de055 mca: track external lib version (runtime/compiletime) for mca component
based on thread: http://www.open-mpi.org/community/lists/devel/2014/04/14505.php

Create mca parameter to track runtime/compiletime ext lib version for component.

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31487.
2014-04-22 18:02:26 +00:00
George Bosilca
6a65d27bcc Print the 3rd buffer for the MPI_Op.
This commit was SVN r31471.
2014-04-21 23:29:30 +00:00
Nathan Hjelm
e125bbe347 coll/ml: clean out apparently stale code
The file coll_ml_ibarrier.c wasn't included in coll/ml's Makefile.am
and the setup code from coll_ml_hier_algorithms_ibarrier.c was not
being called. It looks like this code is stale and has long since been
replaced by the code in coll_ml_barrier.c

Once all these little CMRs are approved I may make it into one roll-up
CMR to make it easier on the RM.

cmr=v1.8.1:reviewer=manjugv

This commit was SVN r31418.
2014-04-16 22:43:43 +00:00
Nathan Hjelm
484a3f6147 coll/ml: fix issues identified by the clang static analyser and fix
a segmentation fault in the reduce cleanup

Some of the changes address false warnings produced by scan-build. I
added asserts and changed some malloc calls to calloc to silence these
warnings.

The was one issue in cleanup for reduce since the component_functions
member is changed by the allreduce call. There may be other issues
with how this code works but releasing the allocated
component_functions after setting up the static functions addresses
the primary issue (SIGSEGV).

cmr=v1.8.1:reviewer=manjugv

This commit was SVN r31417.
2014-04-16 22:43:35 +00:00
Jeff Squyres
6521dcc4f1 Trivial defensive programming/style update: use {}, even for 1-line blocks.
This commit was SVN r31361.
2014-04-09 16:28:31 +00:00
George Bosilca
95a4f219ea This commit fixes some of the Coverity reported warnings. I addressed
some of the collective modules, the shared memory and the profiling
interface. I left out VT, dynamic fcoll and seq rmaps.

cmr=v1.8.1:reviewer=jsquyres:subject=silence Coverity reported warnings

This commit was SVN r31309.
2014-04-06 18:23:49 +00:00
Nathan Hjelm
71bdb8c439 coll/ml: fix some warnings identified by clang
cmr=v1.8.1:reviewer=manjugv

This commit was SVN r31285.
2014-03-28 22:31:41 +00:00
Nathan Hjelm
459431622b Revert "coll/ml: there is no reason not to enable coll/ml when a process in not"
Discussed this with Manju and we decided to back this one out until a later time.

This reverts commit r31188 and closes trac:4435

This commit was SVN r31282.

The following SVN revision numbers were found above:
  r31188 --> open-mpi/ompi@f1dd589092

The following Trac tickets were found above:
  Ticket 4435 --> https://svn.open-mpi.org/trac/ompi/ticket/4435
2014-03-28 21:16:34 +00:00