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Ralph Castain
bd1793ad17 Get the pmix/ext2x component to work. Fix a minor problem in the libevent external component. 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-06-06 20:06:28 -07:00
Ralph Castain
17484409a3 Merge pull request #3662 from rhc54/topic/pmixupagain 
Update to pmix v2.0.0rc1, including thread safety fixes
 2017-06-06 16:12:24 -07:00
Ralph Castain
c3e6dc2022 Update to pmix v2.0.0rc1, including thread safety fixes 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-06-06 15:16:34 -07:00
Ralph Castain
21fba8b7f3 Merge pull request #3659 from rhc54/topic/threads 
Update OPAL and ORTE for thread safety
 2017-06-06 14:52:40 -07:00
Ralph Castain
93cf3c7203 Update OPAL and ORTE for thread safety 
(I swear, if I look this over one more time, I'll puke)

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-06-06 12:30:57 -07:00
Ralph Castain
7be09f8143 Merge pull request #3658 from rhc54/topic/pmixup 
Update to PMIx master
 2017-06-06 11:23:20 -07:00
Ralph Castain
2f85d10600 Update to PMIx master 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-06-06 08:19:25 -07:00
George Bosilca
ba46b35515
Dont assume a size for constants with UL and ULL. 
According to Section 6.4.4.1 of the C, we do not need to prepend a type
to a constant to get the right size. The compiler will infer the type
according to the number of bits in the constant.

Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
 2017-06-05 22:07:53 -04:00
Ralph Castain
29411472f2 Merge pull request #3656 from rhc54/topic/silence 
Silence warnings when terminating
 2017-06-05 15:22:02 -07:00
Ralph Castain
a28eaf914a Silence warnings when terminating 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-06-05 13:53:07 -07:00
Jeff Squyres
44aef39b24 Merge pull request #3641 from ggouaillardet/topic/fortran_strings 
fortran/base: rename strings.h into fortran_base_strings.h
 2017-06-05 15:31:08 -04:00
Ralph Castain
8a377beb25 Merge pull request #3651 from rhc54/topic/stuff 
Do not hang if we cannot relay messages. Eliminate extra error log message
 2017-06-05 09:36:29 -07:00
Ralph Castain
594c0e2876 Retain the max terminal length of 78 characters, replace the word "disabled" with a simple "-" and hope people know what that means 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-06-05 07:10:05 -07:00
Ralph Castain
8f526968c2 Do not hang if we cannot relay messages. Eliminate extra error log message 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-06-05 06:35:19 -07:00
Ralph Castain
dea9ef2020 Merge pull request #3637 from hjelmn/osc_sm_info_fix 
osc/sm: fix SEGV in new info usage
 2017-06-05 05:45:21 -07:00
Ralph Castain
6d68d2ee0b Merge pull request #3650 from rhc54/topic/info 
Change the default sizes for opal_info output
 2017-06-05 05:21:59 -07:00
Ralph Castain
e25a051f41 Change the default sizes for opal_info output 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-06-04 20:30:53 -07:00
Ralph Castain
51b4078b70 Merge pull request #3648 from rhc54/topic/ofi 
Clean up the conduit open code so we return detectable errors when co…
 2017-06-02 18:08:55 -07:00
Ralph Castain
e884cbf5f5 Even though the ofi component doesn't do any routing itself, the rest of the code base (e.g., grpcomm) needs to know what routing module this component is using. So set it to the "direct" module, and don't allow ofi to be used if that module isn't available. 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-06-02 15:47:25 -07:00
Jeff Squyres
68a22689c4 Merge pull request #3649 from jsquyres/pr/fix-signal-include 
ess: add missing <signal.h> header
 2017-06-02 18:41:48 -04:00
Ralph Castain
ba9a6078c2 Add ability to select transport, and only compare the first one in the conduit list for a match. This lets you select which conduit to use for OFI - if you set "-mca rml_ofi_transports ethernet" you'll pickup the mgmt conduit. If you set "-mca rml_ofi_transports fabric", you'll get the coll conduit 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-06-02 14:31:23 -07:00
Jeff Squyres
af9565ec25 ess: add missing <signal.h> header 
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
 2017-06-02 14:11:40 -07:00
Ralph Castain
b0b985bb06 Merge pull request #3644 from rhc54/topic/signals 
Shift the signal forwarding code to ess/base...
 2017-06-02 13:45:13 -07:00
Ralph Castain
066d5eedce Shift the signal forwarding code to ess/base so it can be available to more than just the hnp component. Extend the slurm component to use it so that any signals given directly to the daemons by their slurmstepd get forwarded to their local clients 
Check for NULL

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-06-02 10:59:14 -07:00
Ralph Castain
6b3bbd30c5 Clean up the conduit open code so we return detectable errors when conduit not opened. 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-06-02 10:40:51 -07:00
Ralph Castain
e45a358bf0 Merge pull request #3647 from rhc54/topic/forced 
Provide better help when forced_terminate is invoked
 2017-06-02 10:27:41 -07:00
Ralph Castain
2ab4f93f6a Instead of "forced_terminate" just quietly causing the daemon to disappear, let's at least attempt to let the user know where the problem occurred. 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-06-02 08:28:16 -07:00
Ralph Castain
cde80bbf47 Merge pull request #3638 from anandhis/ofi-coll-conduit-fail-dbg 
Minor clean up to rml-ofi send message
 2017-06-01 20:51:22 -07:00
KAWASHIMA Takahiro
c8d38d31c6 Merge pull request #3618 from kawashima-fj/pr/java-doc-man 
java: Detect `javadoc` path and improve `mpijavac` man page
 2017-06-02 10:24:05 +09:00
anandhi
6ddb487744 Cleaned up the send_msg(), moved checking for send to self into the send_nb() 
and send_buffer_nb()
	modified:   orte/mca/rml/ofi/rml_ofi_send.c

Signed-off-by: Anandhi Jayakumar <anandhi.s.jayakumar@intel.com>
 2017-06-01 17:50:54 -07:00
Gilles Gouaillardet
08526e8adc fortran/base: rename strings.h into fortran_base_strings.h 
rename ompi/mpi/fortran/base/strings.h so it does not get pulled
when /usr/include/strings.h is expected.

Refs open-mpi/ompi#3639

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
 2017-06-02 09:46:20 +09:00
George Bosilca
037a85a782
Fix the OSHMEM request padding. 
This patch fixes a missed case by 5b670a2 (PR #3634).

Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
 2017-06-01 18:30:02 -04:00
Josh Hursey
1665d771a6 Merge pull request #3635 from wlepera/fix/ibm/155305 
MPI_Sendreceive_replace data error with > 2k msg
 2017-06-01 14:38:01 -05:00
Jeff Squyres
d520c24f3a predefined MPI object padding: set to fixed number of bytes (#3634) 
Convert the predefined MPI object padding to a fixed number of bytes
(vs. a multiple of sizeof(void*)) so that the padding is the same size
between 32 and 64 bit builds.  I.e., we won't have a situation where
we've run out of padding in 32 bit builds but still have more space
available in 64 bit builds.

Fixes #3610

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
 2017-06-01 15:28:23 -04:00
Nathan Hjelm
d10e6455a0 osc/sm: fix SEGV in new info usage 
This commit moves the info subscribe for the blocking_fence to after
the global_state is allocated and moves setting win->w_osc_module to
before the info subscribe for alloc_shared_contig. This fixes a SEGV
caught by MTT.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2017-06-01 12:32:30 -06:00
William LePera
a7c9c4aef3 MPI_Sendreceive_replace data error with > 2k msg (RTC 155305) 
Signed-off-by: William LePera <lepera@us.ibm.com>
 2017-06-01 13:08:58 -04:00
Gilles Gouaillardet
5e9be7667b Merge pull request #3600 from ggouaillardet/topic/osc_rdma_get_segment 
osc/rdma: fix osc_rdma_get_remote_segment() length parameter
 2017-06-01 13:09:14 +09:00
Ralph Castain
4c00e2ca2f Merge pull request #3620 from rhc54/topic/grr 
Fix uninitialized variable. Set exit codes for failed launch so we get pretty error messages
 2017-05-31 13:08:42 -07:00
Nathan Hjelm
e1a997c0cb Merge pull request #3593 from hjelmn/bug_3575 
osc/rdma: fix typo in ompi_osc_rdma_lock_acquire_exclusive
 2017-05-31 08:54:40 -06:00
Ralph Castain
9d6b929894 Fix uninitialized variable. Set exit codes for failed launch so we get pretty error messages 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-05-31 07:38:37 -07:00
KAWASHIMA Takahiro
76b1f80664 java: Use correct date/version in mpijava man page 
`mpijavac.1` should be generated at `make`-time...

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
 2017-05-31 17:24:49 +09:00
Ralph Castain
9c1df3f7f0 Merge pull request #3615 from rhc54/topic/sigh 
Roll in latest PMIx updates
 2017-05-30 23:13:15 -07:00
KAWASHIMA Takahiro
63f0945dcc java: Detect the path of javadoc in configure 
Without this change, the directory of `javadoc` command must be
included in the `PATH` environment variable at `make`-time.
Paths of `javac`, `javah`, and `jar` commands are detected in
`configure`. So the path of `javadoc` also should be detected.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
 2017-05-31 14:26:14 +09:00
Ralph Castain
26d96061aa Roll in latest PMIx updates 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-05-30 21:35:35 -07:00
Ralph Castain
6ff2780426 Merge pull request #3614 from rhc54/topic/sync 
Don't sweat the "sync" settings on file descriptors as those flags aren't apparently fully portable
 2017-05-30 21:34:29 -07:00
Ralph Castain
26e7515a5e Don't sweat the "sync" settings on file descriptors as those flags aren't apparently fully portable 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-05-30 20:37:26 -07:00
Howard Pritchard
de92d1b9ce Merge pull request #3506 from hppritcha/topic/fix_issue_1089 
configury: add option to disable enable-new-dtags
 2017-05-30 19:56:14 -06:00
Ralph Castain
1fe452d371 Merge pull request #3607 from rhc54/topic/server 
Ensure that data from a job that was stored in ompi-server is purged once that job completes. Cleanup a few typos. Silence a Coverity warning
 2017-05-30 17:20:37 -07:00
Ralph Castain
5d990b557c Reorg ordering so that bare executable names also are found 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-05-30 15:58:55 -07:00
Ralph Castain
321abfc8c6 Fix cwd and preload-binary options 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2017-05-30 14:07:22 -07:00