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Jeff Squyres
90576a435b Fixes trac:1345
The issue is that the field mca_topo_base_comm_t->mtc_periods_or_edges
has a different length, depending on whether the communicator is a
graph or a cart.  One of the comm dup functions always assumed that it
was the length required by graph comms, which could lead to badness in
some cases.  This commit makes the legnth of that field on a comm dup
be the proper length and copies the data over appropriately.

I also changed the syntax of the ompi_comm_copy_topo() function to use
shorter pointer notation; it made the code much easier to read and
fix. 

This commit was SVN r18752.

The following Trac tickets were found above:
  Ticket 1345 --> https://svn.open-mpi.org/trac/ompi/ticket/1345
2008-06-26 16:59:31 +00:00
Ralph Castain
158040cf3b First step: be kind to Jeff's disk space - let's abort without dumping core files all over the place
This commit was SVN r18751.
2008-06-26 16:10:03 +00:00
Ralph Castain
ecfb436e96 Add something that may only exist on the Mac...but is annoying nonetheless.
This commit was SVN r18750.
2008-06-26 15:10:47 +00:00
Ralph Castain
6af8a73dc0 Modify the checking logic to look for NULL return
This commit was SVN r18749.
2008-06-26 14:08:36 +00:00
Ralph Castain
af8c167861 May be picky, but cleanup before returning in error conditions
This commit was SVN r18748.
2008-06-26 13:31:36 +00:00
Ralph Castain
3631a60181 Update the PML selection logic to detect when a modex is required, and in those cases to only have rank=0 report its selected module. This is per the email thread on the devel list:
http://www.open-mpi.org/community/lists/devel/2008/06/4223.php

This commit was SVN r18747.
2008-06-26 13:22:48 +00:00
Ralph Castain
7d8ac08d5d Update the default mca params for LANL to block parallel file systems from being used for session directories
This commit was SVN r18746.
2008-06-26 13:19:18 +00:00
Ralph Castain
9cebe0ca96 Ckpt the bproc support. All compiles now except for PLM module
This commit was SVN r18744.
2008-06-26 03:48:22 +00:00
Jeff Squyres
dd563f9297 Add more output to btl_base_verbose
This commit was SVN r18743.
2008-06-25 20:16:34 +00:00
Jeff Squyres
b8b1aded4e Hook all the ibcm diagnostics up to "--mca btl_base_verbose 1":
* Use BTL_VERBOSE
 * Remove tailing \n's
 * Remove redundant prefixes (BTL_VERBOSE outputs __FILE__, function,
   and __LINE__)

This commit was SVN r18742.
2008-06-25 19:19:03 +00:00
Jeff Squyres
78a90b1698 We just created the v1.3 branch, so the trunk is therefore hereby
designated as "v1.4".

This commit was SVN r18741.
2008-06-25 15:01:01 +00:00
Josh Hursey
a003fa7a50 C/R fix for broken CRS component selection resulting from r18707.
Make sure that if we ask for the 'none' component (which is not a 'real' component, but a component in crs/base) then we do not fail out of the box when using tools. We check for the {{{OPAL_ERR_NOT_FOUND}}} error.

Also make sure that component_open() returns {{{OPAL_ERR_NOT_FOUND}}} when it cannot find a value instead of {{{OPAL_ERROR}}} which means something quite a bit different.

C/R is working but the tools still print the warning below everytime they are ran:
{{{
--------------------------------------------------------------------------
A requested component was not found, or was unable to be opened.  This
means that this component is either not installed or is unable to be
used on your system (e.g., sometimes this means that shared libraries
that the component requires are unable to be found/loaded).  Note that
Open MPI stopped checking at the first component that it did not find.

Host:      odin.cs.indiana.edu
Framework: crs
Component: none
--------------------------------------------------------------------------
}}}

I'll have to figure out a work around for this warning (maybe work on the {{{MCA_NULL}}} Ticket #1291).

This commit was SVN r18739.

The following SVN revision numbers were found above:
  r18707 --> open-mpi/ompi@bdaaf01d8a
2008-06-25 14:55:09 +00:00
Jeff Squyres
26f6d9cf0c Properly protect the use of dev->transport_type and
IBV_TRANSPORT_IWARP.

This commit was SVN r18738.
2008-06-25 14:50:59 +00:00
Jeff Squyres
64034b65d0 Remove debugging message kruft
This commit was SVN r18737.
2008-06-25 11:32:33 +00:00
George Bosilca
df9e54194b Fix a deadlock in the put protocol for MX. The callback was never triggered,
as the send and the put share the same execution path and in the case of the
put the MCA_BTL_DES_SEND_ALWAYS_CALLBACK was not set.

This commit was SVN r18735.
2008-06-25 03:45:30 +00:00
George Bosilca
24316b77cf This commit is related to ticket #1362. The following devices respect the
behavior described on the ticket: elan, gm, mx, self, sm, tcp.

This commit was SVN r18734.
2008-06-25 03:35:07 +00:00
Brian Barrett
cbd6749c22 Move the lock initialization back to orte_init so that the finalize lock
is properly initialized and available in all cases (like ompi_info, where
the ess is never actually initialized).  Fixes trac:1364.

This commit was SVN r18733.

The following Trac tickets were found above:
  Ticket 1364 --> https://svn.open-mpi.org/trac/ompi/ticket/1364
2008-06-25 03:18:37 +00:00
George Bosilca
2bc52a87d2 Related to my previous commit. The Sicortex is a MIPS machine, so
allow the assembly to understand this.

This commit was SVN r18732.
2008-06-25 03:09:02 +00:00
George Bosilca
872d957550 Allow Open MPI to configure correctly on the Sicortex machine.
This commit was SVN r18731.
2008-06-25 03:07:53 +00:00
Brian Barrett
e9c50a29ba Some (rare) platforms only have a #define for htonl and friends,
but not anything in libc.  Which causes an incorrect answer for
AC_CHECK_FUNCS.  Work around that by also checking for the
#define.

This commit was SVN r18730.
2008-06-24 23:20:25 +00:00
Brian Barrett
e7a299d046 Add timer support for Catamount
This commit was SVN r18729.
2008-06-24 22:13:34 +00:00
Jeff Squyres
edad3b66a2 Add warning message if you request one max_inline_data value and the
device reduces it.

This commit was SVN r18728.
2008-06-24 20:40:03 +00:00
Jon Mason
eefc8956b6 Fix a bug introduced in r18725
ompi_info will crash due to a reference to a unalloced struct.  Add a check for
this struct to prevent this crash.

This commit was SVN r18727.

The following SVN revision numbers were found above:
  r18725 --> open-mpi/ompi@c2351d39f1
2008-06-24 20:38:47 +00:00
Brian Barrett
ac337114e6 Use ' ' instead of / / for the regex in split() when preparing the different
lists of flags for exec.  ' ' is a magic value that means match all
white space, and trim leading / trailing whitespace.  Will prevent
many spurious arguments to underlying compiler.

This commit was SVN r18726.
2008-06-24 19:37:05 +00:00
Jon Mason
c2351d39f1 Fix Ticket #1359
If rdmacm cpc is disabled and an iwarp device is forced to be used, then
mca_btl_openib_get_iwarp_subnet_id will attempt to reference an uninitalized
list.  Modify the code to check for the uninitalized list and return zero.

Also, fix a memory leak caused by not freeing alloced addresses structs during
shutdown. 

This commit was SVN r18725.
2008-06-24 19:16:06 +00:00
George Bosilca
fbf341068a Remove the pending queue from the shared memory BTL. The PML is in charge of managing
the fragments that failed to be send, there is no need to replicate the same
mechanism in the BTL.
Force the SM BTL to empty all ack fragments in the component progress function.

This commit was SVN r18724.
2008-06-24 19:01:26 +00:00
Jeff Squyres
ea21c31f44 * MCA params btl_openib_use_eager_rdma can now override the
INI file use_eager_rdma value (fixes trac:1169)
 * fixed a typo in a MCA param help message
 * made the check for enabling short/eager RDMA more robust in the
   presence of progress threads; it now emits a show_help warning

This commit was SVN r18723.

The following Trac tickets were found above:
  Ticket 1169 --> https://svn.open-mpi.org/trac/ompi/ticket/1169
2008-06-24 18:31:46 +00:00
Ralph Castain
578d1c15c6 Allow the ESS to return the hostname and arch for a specified daemon instead of just for application procs. Uses the same API - just need to detect that the specified proc is a daemon and lookup its corresponding node in the nidmap.
This commit was SVN r18722.
2008-06-24 17:53:10 +00:00
Ralph Castain
b118779c08 It is okay for us to init the ORTE mca params multiple times. Indeed, it is absolutely required by orterun as the first time has to be done prior to parsing the command line, which means that the mca values haven't been parsed yet!
Add ability for sys admins to prohibit putting session directories under specified locations. Thus, they can now protect parallel file systems from foolish user mistakes.

This commit was SVN r18721.
2008-06-24 17:50:56 +00:00
Jeff Squyres
e0545460ff Fixes trac:1355: allow INI file to set max_inline_data vale, and if not
specified, probe for max value supported by device.

This commit was SVN r18720.

The following Trac tickets were found above:
  Ticket 1355 --> https://svn.open-mpi.org/trac/ompi/ticket/1355
2008-06-24 17:18:07 +00:00
Rolf vandeVaart
95cd9758e5 Fix broken build on Solaris.
This commit was SVN r18719.
2008-06-24 14:57:12 +00:00
Terry Dontje
12baa72580 This commit fixes trac:1306
This commit was SVN r18718.

The following Trac tickets were found above:
  Ticket 1306 --> https://svn.open-mpi.org/trac/ompi/ticket/1306
2008-06-24 14:38:11 +00:00
George Bosilca
1eb62b6c48 Remove a warning. Close ticket #1357.
This commit was SVN r18717.
2008-06-24 14:23:02 +00:00
Ralph Castain
17fcd72b5d Restore bproc code - if someone wants to maintain it, then more power to them...but it would definitely be easier if the old code is in the trunk. This is all .ompi_ignore'd except for me so I can play with making it compile again in my copious free time.
This commit was SVN r18716.
2008-06-24 01:27:22 +00:00
Ralph Castain
3e61a3f92e Sandbox for next-gen launch
This commit was SVN r18715.
2008-06-24 01:25:51 +00:00
Jeff Squyres
3f95b906c5 Fixes trac:1085: Improves SLURM configure logic to also allow OS X or any platform where srun is found in the PATH.
This commit was SVN r18714.

The following Trac tickets were found above:
  Ticket 1085 --> https://svn.open-mpi.org/trac/ompi/ticket/1085
2008-06-23 23:12:55 +00:00
Ralph Castain
f799ea225f Orterun creates a "clean" copy of its environment for use in launching procs. This includes properly setting LD_LIBRARY_PATH and PATH, among other things. Unfortunately, our PLM modules were using the local environ instead of the saved copy, thus missing a number of things that really should have been included. From what I see, we got away with the error because the PLM's were duplicating all that setup logic themselves - I'll clean this up over the next few days.
Meantime, correct the PLM's so they use the correct environ for launching.

This commit was SVN r18713.
2008-06-23 22:39:36 +00:00
Ralph Castain
f70b7e51ce Fix a missing header file and ensure we use a portable name for a system limit
This commit was SVN r18712.
2008-06-23 22:32:26 +00:00
Tim Mattox
378b0010c5 Resync the NEWS file with 1.2.7 changes.
This commit was SVN r18711.
2008-06-23 19:30:13 +00:00
Ralph Castain
0fa9d88009 Set $PWD for the application proc to match the cwd. If the user specifies a working dir via -wdir, this ensures that the enviro variable matches what they get from getcwd. Note that any subsequent calls to chdir in the user's program will break that equivalence - we can only ensure it starts out matching!
This commit was SVN r18709.
2008-06-23 18:25:41 +00:00
Ralph Castain
acbcbb81b5 Add some debugging output to the modex set_proc_attr function to see what is being added to the modex
This commit was SVN r18708.
2008-06-23 18:24:08 +00:00
Jeff Squyres
bdaaf01d8a Fixes trac:1338: Have the MCA base specifically check for all requested
components.  If they are not found / able to be opened, a warning will
be printed and the mca_base_component_find() will return
OPAL_ERR_NOT_FOUND.  It is the upper-layer's responsibility to handle
this error appropriately.

This commit was SVN r18707.

The following Trac tickets were found above:
  Ticket 1338 --> https://svn.open-mpi.org/trac/ompi/ticket/1338
2008-06-23 16:14:05 +00:00
Lenny Verkhovsky
937380df2f Memory check after allocation in SM fixed
This commit was SVN r18706.
2008-06-22 14:52:44 +00:00
Jeff Squyres
51d833e8d1 Minor fixes and comment clarifications for MPI-2.1-mandated handling
of strings.  We mostly did the Right Things already; I simplified the
code a bit and also had us not write to more characters in the C
bindings than we're supposed to (per language in the MPI-2.1 spec).

Fixes trac:1238.

This commit was SVN r18705.

The following Trac tickets were found above:
  Ticket 1238 --> https://svn.open-mpi.org/trac/ompi/ticket/1238
2008-06-21 19:33:47 +00:00
Jeff Squyres
24c3aa1d77 Really fix "make dist". Really.
This commit was SVN r18704.
2008-06-21 18:04:38 +00:00
Jeff Squyres
74089a0593 Add a bunch of bullets about improvements in the openib BTL.
This commit was SVN r18703.
2008-06-21 13:35:03 +00:00
Jeff Squyres
281c37afcc Ensure to ignoe the "empty" CPC components.
This commit was SVN r18702.
2008-06-21 11:39:53 +00:00
Jeff Squyres
807e2cc742 Mark a notable place where we need to return an error up to the BTL or
PML.

This commit was SVN r18701.
2008-06-20 22:11:49 +00:00
Jeff Squyres
5ded50df0e * Fix a > that should be ==
* Ensure to destroy the correct QP (local->id[num]->qp will always
   have a valid pointer in it, even if we setup a dummy qp)
 * Note two notable places where we need to figure out how to
   propagate errors up from the CPC to the main BTL / PML when errors
   occur.  Probably have the same issue in IBCM, too.

This commit was SVN r18700.
2008-06-20 22:09:30 +00:00
Jeff Squyres
0074126886 Per #1352, most iWARP adapters today cannot handle connections between
two processes on the same server (!).  So for today, we'll simply mark
all local processes that use iWARP adapters as "unreachable".

More details in #1352.

This commit was SVN r18699.
2008-06-20 22:08:00 +00:00