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Граф коммитов

1524 Коммитов

Автор SHA1 Сообщение Дата
Jeff Squyres
fcb7fc6b56 Merge pull request #990 from ggouaillardet/topic/f08_vs_pmpi
configury: do not build usempif08 is PMPI is not built
2015-10-12 13:24:22 -04:00
Gilles Gouaillardet
d7e6daf75f configury: do not build usempif08 is PMPI is not built
this is a revamp of commit open-mpi/ompi@2d1a8fa920
Thanks Jeff for the review !
2015-10-08 09:04:07 +09:00
Mike Dubman
a120fe4a14 BUILD: add --with-platform-patches-dir=DIR flag to configure
allow to override default patch dir to arbitrary.
2015-10-07 16:18:48 +03:00
Mike Dubman
eb883ae98f BUILD: allow specifying platform patch_dir from cmd line
before:

patch_dir=$PLATFORM.patches

after

patch_dir can be specified as ./configure <....> patch_dir=/usr/local/site_ompi_v_x.y_patches/
if not specified - use default
2015-10-07 09:31:49 +03:00
Gilles Gouaillardet
2d1a8fa920 fortran: do not build the f08 bindings if PMPI is not built 2015-10-05 09:43:46 +09:00
Mike Dubman
e280be3dff Revert "BUILD: log applied patches into config.log" 2015-10-04 08:12:05 +03:00
Mike Dubman
5d83aa8cdc BUILD: log applied patches to config.log 2015-10-01 10:06:17 +03:00
Mike Dubman
2333f8249f Merge pull request #914 from miked-mellanox/topic/platform_vendor_patches
BUILD: add support for platform specific patches
2015-09-30 09:22:41 +03:00
Mike Dubman
7502d2a779 BUILD: add support for vendor specific patches
./configure --with-platform=contrib/platform/$name will apply all patches
found in contrib/platform/$name.patches/ directory during "configure" phase.

It allows vendors to distribute not-accepted or vendor-specific patches as
part of standard ompi tarball and reduce burden of keeping private repos.

Added:

* VPATH support
* $srcdir/.platform_patches file created if patches already applied
* configure will fail with error if patch cannot be applied (using dry-run)
* configure will fail if patches modifying *.[am,m4] files (unsupported)
* remove unused patch_errors var
* set with_ident_string if platform file applied patches
2015-09-29 09:47:40 +03:00
bosilca
984b35b860 Merge pull request #633 from bosilca/topic/enable_atomics
Enable by default the _sync version of atomic operations on OS X.
2015-09-28 12:03:08 -04:00
Howard Pritchard
6cdb73ce77 configury: fix tkr macro so it can compile
The tkr m4's fortran couldn't be compiled
by gfortran.  pointer assignment followed by
variabl definition didn't compile.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2015-09-25 12:22:50 -05:00
Jeff Squyres
3698621df0 fortran ignore TKR: update for strange Intel 2016 compiler suite behavior
The Intel 2016 compiler suite apparently only partially supports the
!GCC pragmas (prior versions either didn't support it at all, or our
existing configure test was sufficient to disqualify !GCC pragma
support when compiling with the Intel compiler).

With the existing configure test, the Intel 2016 compiler suite would
*pass* the test and therefore think that it could use !GCC as the
"ignore TKR" pragma.  However, the "!GCC ATTRIBUTES NO_ARG_CHECK"
pragma doesn't work with scalar integers (although it seems to work
for the other types in this test).

This commit adds a scalar integer test to the ignore TKR pragma
configure test, which is enough to make the Intel 2016 compiler suite
fail with !GCC (this then allows configure to advance on to trying the
!DEC pragma, which *does* work properly with the Intel 2016 compiler
suite).

Thanks to Fabrice Roy for reporting the problem.

Fixes open-mpi/ompi#937.
2015-09-24 22:24:30 -07:00
Ralph Castain
0b3f4c55f8 Do not use "==" in configure "test" calls
Thanks to Kevin Buckley for pointing it out
2015-09-20 21:34:27 -07:00
Jeff Squyres
66dda00f06 fortran configiry: test for USE...ONLY support
As of v15.7, the PGI Fortran compiler does not properly support how
Open MPI uses the "USE ... ONLY" Fortran syntax to include modules
with conflicting symbol definitions (interestingly, pgfortran only has
a problem with this when compiling with -g).

In short, OMPI uses "USE :: module_aaa, ONLY: foo" and "USE ::
module_bbb, ONLY: bar" to use modules aaa and bbb, even though they
contain conflicting definitions for some symbols.  However, the use of
the ONLY clause should preclude the inclusion of the conflicting
symbols -- as the word implies, it should direct the compiler to
*only* use the symbols identified by the clause (i.e., foo and bar, in
this example).

This commit adds a configure test for this capability.  If the
compiler fails to build a simple test that mimics this behavior, then
disable the mpi_f08 bindings.

Fixes open-mpi/ompi#857
2015-09-02 15:55:24 -07:00
Nathan Hjelm
f451876058 Merge pull request #825 from hjelmn/white_space_purge
periodic trailing whitespace purge
2015-08-25 19:23:52 -06:00
Jeff Squyres
93708af013 ompi_setup_mpi_fortran.m4: only set BUILD_SIZEOF if happy=1
Only set OMPI_FORTRAN_BUILD_SIZEOF to 1 if $ompi_fortran_happy is also
1 (i.e., we're building the Fortran interface).  This prevents
building [p]size_f.f90 and trying to compile it if there is no Fortran
compiler, for example.
2015-08-25 07:12:18 -07:00
Nathan Hjelm
156ce6af21 periodic whitespace purge
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-08-24 09:32:33 -06:00
Jeff Squyres
699ab67598 Merge pull request #719 from ggouaillardet/poc/c_fortran_alignment
fortran: (try to) align C objects used by Fortran
2015-08-19 08:55:10 -04:00
Nathan Hjelm
551c2ea480 opal/asm: remove alpha support
This commit removes alpha asm support. No current processor
manufacturer makes chips compatible with DEC alpha and no
participating organization has alpha processors. This makes it
difficult to support alpha via assembly.

This doesn't mean Open MPI will no longer build/work on alpha
processors. It should continue to work with gcc's builtin sync
atomics.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-08-18 09:11:38 -06:00
Gilles Gouaillardet
99730f798b fortran: (try to) align C objects used by Fortran
Fortran uses objects (ompi_f08_mpi_comm_world, mpi_fortran_bottom,, ...) that are defined in C.
Some compilers have different requirements on how these objects should be aligned.
Smaller alignment in C can lead to several confusing warnings from the linker, so try to
find the alignment expected by Fortran compiler, and inform the C compiler.
2015-08-18 14:01:20 +09:00
George Bosilca
277269b641 Have the __sync atomics the default. Remove spurious checking and
result messages
2015-08-17 18:08:25 -04:00
George Bosilca
5aadf39545 Clean-up the OS X selection logic. 2015-08-17 18:08:16 -04:00
George Bosilca
3eaefd790c Enable by default the _sync version of atomic operations on OS X. 2015-08-17 18:08:03 -04:00
Gilles Gouaillardet
6118236f1a Merge pull request #796 from ggouaillardet/topic/hcoll_config
configury: fix hcoll, fca and mxm detection and revamp yalla Makefile.am
Thanks to David Shrader and Ake Sandgren for bringing this issue to our attention
2015-08-14 08:55:46 +09:00
Gilles Gouaillardet
7b7842fd5a configury: fix description of the --with-knem option 2015-08-13 17:53:48 +09:00
Gilles Gouaillardet
288e13ba7c configury: fix --with-mxm
* search mxm libs in both DIR/lib and DIR/lib64
 * fix the description of the --with-mxm option
2015-08-13 11:09:26 +09:00
Gilles Gouaillardet
1a238d3a4f configury: fix fca detection
* do not add -I/.../include/fca -I /.../include/fca_core to CPPFLAGS
 * allow configure --with-fca
 * search fca libs in both DIR/lib and DIR/lib64
 * fix the description of the --with-fca option
2015-08-13 11:09:15 +09:00
Gilles Gouaillardet
df98a73131 configury: fix hcoll detection
* do not add -I/.../include/hcoll -I /.../include/hcoll/api to CPPFLAGS
 * allow configure --with-hcoll
 * search hcoll libs in both DIR/lib and DIR/lib64
 * fix the description of the --with-hcoll option
2015-08-13 11:08:56 +09:00
Jeff Squyres
6a7d5271c4 ompi_ext.m4: allow extensions to have config.h.in
Previously, extensions were required to have a config.h for their C
bindings.  This commit allows them to have a config.h.in, in case
their C bindings header file is generated.
2015-08-12 12:22:59 -07:00
Nysal Jan K.A
2d2ea63231 Fix PMI and PMI2 builds 2015-08-11 21:13:45 +05:30
Gilles Gouaillardet
9c77c6b66d fortran: fix f08 bindings
only define the unique fortran symbol depending on
 - CAPS
 - PLAIN
 - SINGLE_UNDERSCORE
 - DOUBLE_UNDERSCORE
and bind the f08 symbol to the uniquely defined C symbol.

Use real data structures to make the code simpler.
(perl script written by Jeff)
2015-07-27 16:28:57 +09:00
Gilles Gouaillardet
f7cf7d5070 configury: fix XRC detection on OFED < 3.12
since ibv_create_xrc_rcv_qp is now deprecated, and in order to
be "future-proof", we have to consider the case in which only XRC Domains are supported.
also, correctly handle distro that ship broken ibverbs devel headers

Thanks Paul Hargrove for the detailled report.
2015-07-13 10:43:22 +09:00
Gilles Gouaillardet
66ef1c3c55 configury: fix fortran binding checks for ompi extensions 2015-07-13 10:17:13 +09:00
Rolf vandeVaart
f1fff56d74 One word change from none to all - new default 2015-07-10 11:23:22 -04:00
Jeff Squyres
4341639a66 Revert "configury: fix (again) XRC detection on OFED < 3.12"
@ggouaillardet is likely offline for the weekend, but master is broken
on RHEL 6.5 systems that do not have MOFED installed.  So I'm taking
the liberty of revering this commit; I'm guessing Gilles will fixup
and re-commit next week.

This reverts commit 77f8282d51.
2015-07-10 06:45:33 -07:00
Gilles Gouaillardet
77f8282d51 configury: fix (again) XRC detection on OFED < 3.12
since ibv_create_xrc_rcv_qp is now deprecated, and in order to
be "future-proof", we have to consider the case in which only XRC Domains are supported.

Thanks Paul Hargrove for the detailled report.
2015-07-10 15:31:45 +09:00
Gilles Gouaillardet
9a49d42f81 configury: fix XRC detection on OFED < 3.12
Thanks Paul Hargrove for the report
2015-07-10 10:21:46 +09:00
Gilles Gouaillardet
8eede3c7f1 configury: fix a typo in XRC support detection
Thanks to Ben Menadue for the report
2015-07-09 13:37:49 +09:00
Gilles Gouaillardet
478120ecb4 configury: fix alignment check of bool when cross-compiling 2015-07-07 11:04:07 +09:00
rhc54
5e6670343e Merge pull request #673 from jsquyres/pr/mpi-extension-defaults
MPI extensions: build extensions by default
2015-06-25 12:38:26 -07:00
Jeff Squyres
fca193d316 MPI extensions: build extensions by default
* affinity: will build unless disabled.
* cr: will build if FT is enabled, unless it is disabled.  It will
  also complain/abort if you --with-mpi-ext=cr, but FT is disabled.
* example: will only build if --with-mpi-ext=example (and .ompi_ignore
  is removed)
2015-06-25 11:28:58 -07:00
rhc54
1a767ed47c Merge pull request #654 from rhc54/topic/config
Remove internal bool type definitions
2015-06-25 09:10:21 -07:00
Ralph Castain
536faf3f39 Add requested comment 2015-06-24 08:42:02 -07:00
Ralph Castain
57b7c44aec Cleanup the rest of the no-longer-required bool configury 2015-06-24 08:25:49 -07:00
Ralph Castain
869041f770 Purge whitespace from the repo 2015-06-23 20:59:57 -07:00
Andrew Friedley
2c9be59b37 Add new PSM2 MTL.
This new MTL runs over PSM2 for Omni Path.  PSM2 is a descendant of PSM
with changes to support more ranks and some MPI-3 features like mprobe.

PSM2 will only support Omni Path networks; PSM only supports True Scale.
Likewise, the existing PSM MTL will continue to be maintained for True
Scale, while the PSM2 MTL is developed and maintained for Omni Path.
2015-06-22 07:55:46 -07:00
Jeff Squyres
0b343fa599 opal_check_libfabric.m4: add libfabric m4 macro
Similar to other m4 macros checking for the existence / usability of
external libraries.
2015-06-15 15:17:05 -07:00
Mike Dubman
be5601b5d0 build: fix mxm configure
configure w/ CPPFLAGS/LDFLAGS can add empty -L statement from mxm
Thanks to David Shrader <dshrader@lanl.gov> for patch
2015-05-27 09:59:42 +03:00
Ralph Castain
d3d3e73099 Per request from George, use defined(__APPLE__) instead of OPAL_HAVE_MAC. Don't try to close a negative socket 2015-05-15 07:13:42 -06:00
Ralph Castain
8e30579e6e The Mac appears to have problems with the keepalive support - once keepalive starts, the memory footprint soars. So disable keepalive on the Mac 2015-05-14 18:09:13 -06:00
Gilles Gouaillardet
c4ebdba035 always align words if heterogeneous support is enabled 2015-05-14 15:54:21 +09:00
Gilles Gouaillardet
973a9ec247 configury: fix the error message of the --enable-mpi-fortran option 2015-05-14 15:39:43 +09:00
Ralph Castain
a49d965332 Remove stale file 2015-05-09 07:08:50 -07:00
Jeff Squyres
286c018120 fortran configury: minor updates
* Add a few minor comments
* Rename $OMPI_WANT_FORTRAN_BINDINGS -> $OMPI_MIN_REQUIRED_FORTRAN_BINDINGS
* Minor whitespace cleanups
* Change an "if ..." to an AS_IF
2015-05-08 09:23:55 +09:00
Gilles Gouaillardet
dd572a0838 Fix --with-fortran=... logic 2015-05-08 09:23:55 +09:00
Gilles Gouaillardet
1f525b06f0 configury: add support for Fujitsu compilers.
Fujitsu compilers used with the GNU compatibility option (-Xg)
do not yet support all the gnu flags (e.g. -pedantic) and that can
cause the linker (and hence configure) crash.
Fujitsu compilers are identified by the __FUJITSU macro.
2015-04-30 15:04:53 +09:00
Jeff Squyres
60127b1caa distscript: hugely simplify
Based on initial suggestions from Paul Hargrove
(http://www.open-mpi.org/community/lists/devel/2015/04/17354.php),
simplify the distscript.sh; it really only has to do one thing:
substitute the repo_rev in VERSION.
2015-04-27 06:50:40 -07:00
Jeff Squyres
7d870c8b9e Merge pull request #550 from jsquyres/pr/turn-down-for-WHAT
RFC: opal_config_asm.m4: enable inline assembly on little-endian POWER
2015-04-25 06:25:11 -04:00
Jeff Squyres
0afda878a2 opal_config_asm: remove support for OS X Leopard
We haven't supported OS X Leopard (10.5) for a long time.  So remove
this dead code.
2015-04-24 03:43:56 -07:00
Ralph Castain
df2f002657 Update the name of the distscript.[c]sh file 2015-04-23 18:21:30 -07:00
Nathan Hjelm
b64cf39c3e Remove unnecessary quoting from variables in distscript.sh
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-04-23 13:27:31 -06:00
Nathan Hjelm
deb1542d0d Convert csh script distscript.csh into a POSIX sh script
This commit removes the only cshell script in the Open MPI
project.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-04-23 11:36:12 -06:00
Jeff Squyres
f7b8c11027 opal_config_asm.m4: enable inline assembly on little endian POWER
Suggested by Paul Hargrove,
http://www.open-mpi.org/community/lists/devel/2015/04/17323.php,
amended by Nysal Jan for 32 bit, too.
2015-04-23 05:43:24 -07:00
Jeff Squyres
7da50433f7 opal_check_package: make the var name match
The cache variable now only needs the function name, not the lib name.
2015-04-23 03:22:38 -07:00
Jeff Squyres
97444d82f1 config/Makefile.am: add config/find_common_syms to EXTRA_DIST 2015-04-16 10:08:53 -07:00
Jeff Squyres
2462328ccc config/Makefile.am: whitespace cleanup
No code changes.
2015-04-16 08:56:16 -07:00
Nathan Hjelm
81502fafa8 Merge pull request #379 from hjelmn/remove_enable_smp_locks
Per-RFC: remove the --disable-smp-locks configure option
2015-04-15 10:02:23 -06:00
Dave Goodell
8085edc27c build: detect common symbols at install time
This adds a check at `make install` time to look for common symbols.  It
attempts to ignore "Fortran-shaped" symbols by default.  It also will
look in the source tree for any files named "common_sym_whitelist" and
will ignore any symbols listed in that file (one per line, comments
allowed).

See open-mpi/ompi#375 for more background.
2015-04-14 14:54:26 -07:00
Jeff Squyres
9ac9be15c4 opal_config_subdir.m4: do not export vars before invoking subdir configure
== Short version

Do not export special variables into the environment (e.g., LIBS,
LDFLAGS, etc.) when invoking subdir configure scripts.  This prevents
problems described in open-mpi/ompi#471.

== More detail

Exporing special env variables before invoking a subdir configure
script causes problems in some cases.  E.g., in open-mpi/ompi#471,
when the user configures with `--with-hwloc=/path/to/hwloc`, and that
directory is *not* in a default linker search location will cause the
libevent subdir configuration to fail.

This happens because:

1. We'll pass LIBS="-L/path/to/hwloc/lib -lhwloc" to the libevent
   configure script
1. Meaning: configure-generated executables will link successfully
1. But unless LD_LIBRARY_PATH (or some other
   tell-the-linker-where-to-find-things mechanism) includes
   /path/to/hwloc/lib, the executable can't run.

Specifically, the libevent "hey, does the compiler generate proper
executables?" check will fail, and configure will abort (because OMPI
needs libevent).

I checked the history: exporting these vars dates all the way back to
LAM/MPI.  I can't think of a reason why we need to export these
variables -- AC_CONFIG_SUBDIRs doesn't do it; subdir configure scripts
should be orthogonal from the upper-layer configure script (and its
variables).  So let's remove these export statements and see if
anything breaks.
2015-04-14 07:04:01 -07:00
Jeff Squyres
24fe86b74f opal_config_subdir[_args].m4: use OPAL_VAR_SCOPE_PUSH/POP 2015-04-14 07:04:01 -07:00
Jeff Squyres
f9b7b9f6b2 opal_config_subdir.m4: remove some dead code 2015-04-14 07:04:01 -07:00
Howard Pritchard
28046cdca7 Merge pull request #499 from hppritcha/topic/alps_configury
configury/alps: reduce alps verbosity
2015-03-27 13:19:04 -06:00
Howard Pritchard
f7bf2f7d83 configury/alps: reduce alps verbosity
reduce chattiness of orte_check_alps.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2015-03-27 11:50:05 -07:00
Jeff Squyres
7f3aab9cfa opal_get_version.m4sh: remove stale code
Since getting the git version is very fast (vs. "svnversion"), we
aren't using the opal_ver_need_repo_rev var any more.  So remove this
stale code.
2015-03-26 14:38:17 -07:00
Jeff Squyres
71aae38540 opal_setup_cc.m4: add comment with the specific warning
Also collapse a grep/test into a single statement.
2015-03-26 04:13:53 -07:00
Jeff Squyres
a50f103c0f opal_setup_cc.m4: don't use -finline-functions with clang
Some versions of clang (at least >= 3.5 -- perhaps older versions,
too?) will *warn* about -finline-functions, but still allow it.  This
is very annoying, so check for that warning, too.
2015-03-25 10:31:51 -07:00
Jeff Squyres
0166318966 opal_check_pmi: protect un-prefixed shell variables
Since there's unfortunately only a global namespace for shell
variables, we need to protect un-prefixed shell variables with
OPAL_VAR_SCOPE_PUSH/POP.
2015-03-13 04:48:31 -07:00
Jeff Squyres
914880a368 libtldl: remove libltdl from the tree
The libltdl interface has been completely replaced by the OPAL DL
framework (i.e., the opal_dl interface).

Fixes open-mpi/ompi#311
2015-03-09 08:18:14 -07:00
Jeff Squyres
1995f6beba cuda: convert to opal_dl interface 2015-03-09 08:18:13 -07:00
Jeff Squyres
d6530b0e99 opal_check_package: use AC_SEARCH_LIBS instead of AC_CHECK_LIB
Per discussion on devel
(http://www.open-mpi.org/community/lists/devel/2015/02/17030.php), and
per Autoconf 2.69 docs, use the recommended AC_SEARCH_LIBS instead of
AC_CHECK_LIB (e.g., for functions that appear in libc on some
platforms and in a specific library on other platforms).
2015-03-09 08:15:38 -07:00
Nathan Hjelm
ac82d1a6be Per-RFC: remove the --disable-smp-locks configure option
Use of this configuration option can cause crashing, hanging, and
(worse) incorrect results when btl/sm, btl/scif, or btl/vader are
in use. We discussed this at the January 2015 developers meeting
and it was decided to remove the option entirely. This commit does
just that. All usage of OPAL_WANT_SMP_LOCKS has been removed.
2015-03-04 11:31:43 -07:00
Ralph Castain
1c1d9f69f6 Update the PMI configury to support addition of --with-pmi-libdir option for environments that install the PMI libs in a non-default location 2015-02-27 10:48:28 -08:00
Jeff Squyres
ece8d09b84 opal_setup_wrappers.m4: avoid some repetitive code
Honestly, a bunch of this code could use similar treatment (i.e.,
AC_DEFUN a template that can be used for OPAL/ORTE/OMPI).  However, I
don't quite have time for this today.  Exercise left for the future reader...
2015-02-23 13:54:50 -08:00
Jeff Squyres
f3fd088493 opal_setup_wrappers.m4: whitespace cleanup
No code changes
2015-02-23 13:35:12 -08:00
Jeff Squyres
9b716d946e wrappers: fix errant @{libdir} reference in pkg-config files
The RPATH support added a @{libdir} token into
<package>_WRAPPER_EXTRA_LDFLAGS.  However, these flags are also
substituted into the pkg-config data files, and they don't understand
the @{foo} notation.  So convert @{libdir} into ${libdir}, which
pkg-config *does* understand.

Thanks to Christoph Junghans (@junghans) for notifying us of the issue.

Fixes #406.
2015-02-20 08:43:19 -08:00
Nathan Hjelm
cf91156105 btl/openib: add atomic operation support
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-02-13 11:46:36 -07:00
Jeff Squyres
c368699bde configury: whitespace cleanup
No code changes.
2015-02-09 20:49:04 -08:00
Jeff Squyres
0acdf34044 configury: --enable-dist ceased being useful long ago
The --enable-dist flag is a relic from a prior iteration of the build
system.  It isn't necessary any more.
2015-02-09 20:49:04 -08:00
Jeff Squyres
1f3823b4f7 distscript.csh: no need to get config.sub|guess from upstream
It used to be important to get the latest config.sub and config.guess
from upstream because architectures were changing rapidly, and the GNU
Autotools released super-slowly.

However, architectures have not been changing nearly as fast -- the
versions of config.guess and config.sub that ship in the GNU Autotools
are fine.  So let's stop getting upstream config.guess|sub from
upstream as part of "make dist".
2015-02-09 20:49:04 -08:00
Jeff Squyres
ffe891a460 opal_setup_cc: remove the -fno-common flag
Per open-mpi/ompi#381, this probably wasn't a good idea.

(cherry picked from commit 8ec69f3375f546752960ba3fcb7bd0957eb595c7)
2015-02-05 14:39:14 -08:00
Gilles Gouaillardet
b42e344129 configury: force OPAL_HAVE_CMPXCHG16B=0 on buggy compilers
per several reports on the devel ML, the opal_lifo test hangs
with intel icc 14.0.0.080 (aka 2013sp1) and intel icc 14.0.1.106 (aka 2013sp1u1).
/* older and more recents compilers work fine
 * buggy compilers work also fine but only with -O0 */
2015-02-05 13:24:12 +09:00
Jeff Squyres
41cfad1e0d opal_setup_cc.m4: clean up and unify the CFLAGS tests
Combine a few of the tests and streamline them a bit.

Make the check for -Wno-long-double and -Wstrict-prototypes be for all
compilers, not just GCC.
2015-02-04 10:40:56 -08:00
Jeff Squyres
1d3c4bd7ac opal_setup_cc.m4: whitespace cleanup
No code changes.
2015-02-04 10:40:56 -08:00
Jeff Squyres
e87a6a04c7 opal_setup_cc.m4: see if -fno-common is supported
If we want picky compilation, add -fno-common to CFLAGS if it is
supported.
2015-02-04 10:40:56 -08:00
Gilles Gouaillardet
c52595b12f config/oshmem_*: portability fixes
convert "test ... -o" to "test ... ||"
convert "test ... -a" to "test ... &&"
2015-02-03 15:35:45 +09:00
Gilles Gouaillardet
f5caa39cdb config/orte_*: portability fixes
convert "test ... -o" to "test ... ||"
convert "test ... -a" to "test ... &&"
2015-02-03 15:33:13 +09:00
Gilles Gouaillardet
b4c333fe9b config/opal_*: portability fixes
convert "test ... -o" to "test ... ||"
convert "test ... -a" to "test ... &&"
2015-02-03 15:19:22 +09:00
Gilles Gouaillardet
8fc7c79579 config/ompi_*: portability fixes
convert "test ... -o" to "test ... ||"
convert "test ... -a" to "test ... &&"
2015-02-03 14:50:32 +09:00
Jeff Squyres
fa92996ccb opal_check_package: convert "test ... -o" to "test ... ||" 2015-02-02 03:26:19 -08:00
Jeff Squyres
ed3809a23a opal_check_package: whitespace cleanup; no code changes 2015-02-02 03:25:32 -08:00
Jeff Squyres
24f728596d opal_check_package: minor formatting cleanups
Change # comments to dnl, and add a more thorough explanation of the
parameters to OPAL_CHECK_PACKAGE.
2015-02-02 03:24:40 -08:00
rhc54
95660822b9 Merge pull request #370 from rhc54/topic/dvm
Enable a persistent DVM
2015-02-01 17:37:10 -08:00
Jeff Squyres
cb66aeb697 ompi_check_mx: remove now-unused macro
The code base does not support the MX network stack any more.
2015-02-01 09:12:03 -05:00
Ralph Castain
ec5ccb76cf Enable persistent ORTE DVM so users can execute multiple OMPI jobs within an allocation without restarting the DVM every time. 2015-01-30 11:00:43 -08:00
Bert Wesarg
0d0a754c42 Remove VampirTrace. 2015-01-22 08:08:07 +01:00
Jeff Squyres
04bec4475e openib: check more thoroughly for XRC
Some systems have XRC symbols in their libibverbs libraries, but do
not have the appropriate XRC bits in their devel headers (cough cough
RHEL 6.5 libibverbs-rocee-*.x86-64.rpm cough cough).

So expand the XRC config checks to ensure that we can actually find
one of the XRC constants that we need to compile XRC code before
ruling that we can actually build XRC support.
2015-01-16 18:13:31 -08:00
Gilles Gouaillardet
661c35ca67 cleanup dead code caused by the removal of the --with-threads configure option 2015-01-16 19:13:59 +09:00
Gilles Gouaillardet
7a55d49ca7 configury: per RFC, remove the --with-threads option 2015-01-16 19:13:59 +09:00
Gilles Gouaillardet
e89a2d2c02 make dist: portability fix
if ( -s xxx ) is not supported on Solaris, so use a portable syntax
2015-01-15 18:57:05 +09:00
Gilles Gouaillardet
135ecce0eb btl/openib: rename OPAL_HAVE_XRCD macro into OPAL_HAVE_CONNECTX_XRC_DOMAINS 2015-01-07 13:27:25 +09:00
Gilles Gouaillardet
b3617e736e btl/openib: add XRC support with OFED 3.12+
based on an original patch contributed by Bull.
2015-01-06 15:30:52 +09:00
Howard Pritchard
f009c8425e Merge pull request #325 from hppritcha/topic/issue_324
opal/configury: allow param usage multiple times
2015-01-05 16:19:14 -07:00
Howard Pritchard
a179d6a1d7 opal/configury: add url ref to OPAL_FLAGS_UNIQ
Add a reference to the git issue related to additions to
OPAL_FLAGS_UNIQ to handle multiple instances of --param
in the CFLAGS env. variable.
2015-01-05 16:01:18 -07:00
Howard Pritchard
0a6f841d5f xpmem/config: simple xpmem search on Cray's
Use the pkg-config related m4 functions to find out where
Cray's xpmem.h and libxpmem are located on a system.

With this commit, there is no longer any need to have to
explicitly indicate an xpmem install location on the configure
line, at least for Cray systems running CLE 4.X and 5.X.
2014-12-24 14:40:06 -07:00
Howard Pritchard
66f447b396 opal/configury: allow param usage multiple times
Turns out the OPAL_FLAGS_UNIQ function was chopping
off multiple instances of --param when set in the
CFLAGS.  This can happen when -mnative or other machine
target is specified as part of CFLAGS.

Thanks to QuesarVII for reporting this and supplying a patch.

Fixes #324
2014-12-23 15:45:18 -07:00
Gilles Gouaillardet
8976dcf610 configury: fix pthread flags for fortran 2014-12-22 19:13:45 +09:00
Gilles Gouaillardet
38fdce3aa9 configury: fix a typo in config/opal_config_threads.m4 2014-12-22 18:25:18 +09:00
Gilles Gouaillardet
30cde04139 configury: fix git describe with VPATH 2014-12-22 15:14:33 +09:00
Nathan Hjelm
79d8f6e54d Check if the processor supports compare-and-exchange on 128-bit values.
Before this commit we checked if the compiler supported compare-and-exchange
on 128-bit values. This turned out to be insufficient. This commit strengthens
the check to see if the processor supports the instruction (or built-in). This
check will not work when cross-compiling (will always disable the 128-bit
atomic) so overrides have been added for this case.
2014-12-17 23:34:12 -07:00
Jeff Squyres
e5b0b81ff7 Fortran: tweak wording of C_FUNLOC test message 2014-12-17 03:03:28 -08:00
Gilles Gouaillardet
27aec2ef5b configury: disable f08 fortran bindings if the compiler does
not support c_funloc with TS 29113 subclause 8.1 aka
removed restrictions on ISO_C_BINDING module procedures.
2014-12-17 17:35:45 +09:00
Howard Pritchard
6e1317db68 alps/config: add WRAPPER defines when alps found
Add WRAPPER flags for alps libraries to support
static builds.
2014-12-16 09:52:24 -08:00
Gilles Gouaillardet
cfcce01faf configury: test the __sun macro to detect solaris OS.
recent oraclestudio compilers do not set the __sun__ macro
2014-12-16 18:21:58 +09:00
Nathan Hjelm
ccbb869274 Use AC_TRY_LINK not AC_TRY_COMPILE when testing for __sync_bool_compare_and_swap on 128-bit values 2014-12-09 18:56:21 -07:00
Jeff Squyres
d02756cdbb libfabric: various configury updates
1. Ensure to override CFLAGS properly.  Move the setting of CFLAGS outside the AM_CONDITIONAL so that Automake doesn't get confused (because CFLAGS is already set inside an AM_CONDITIONAL -- moving it outside the conditional ensure that this local CFLAGS override trumps all other CFLAGS overrides).
2. Only build libfabric on Linux. Add a little more configury to ensure that we only try to build libfabric on Linux.
3. Remove a dead/unused file
4. Fix typo in condition check
5. Use "false", not "/bin/false"
2014-12-08 11:39:07 -08:00
Jeff Squyres
7a96b58882 common verbs: remove usnic-specific code
Now that the usnic BTL uses libfabric, we can remove the
usnic-specific code from opal/mca/common/verbs.
2014-12-08 11:37:37 -08:00
Jeff Squyres
984982790a usnic: convert from verbs to libfabric (yay!)
This commit represents the conversion of the usnic BTL from verbs to
libfabric.

For the moment, libfabric is embedded in Open MPI (currently in the
usnic BTL).  This is because the libfabric API is still changing, and
also has not yet been released.  Ultimately, this embedded copy of
libfabric will likely disappear and the usnic BTL will rely on an
external installation of libfabric.

New configure options:

* --with-libfabric: will cause configure to fail if libfabric support
    cannot be built
* --without-libfabric: will prevent libfabric support from being built
* --with-libfabric=DIR: use an external libfabric installation
* --with-libfabric-libdir=LIBDIR: when paired with --with-libfabric=DIR,
    use LIBDIR for the libfabric installation library dir

The --with-libnl3[-libdir] arguments are now gone.
2014-12-08 11:37:37 -08:00
Nathan Hjelm
077f4a2982 Merge pull request #297 from hjelmn/topic/cmpset128
Add support for 128-bit compare and swap on x86_64 when available.
2014-12-04 16:05:13 -06:00
Nathan Hjelm
0efe6baf64 Add check for -mcx16 flag for 128-bit compare and swap
Some versions of gcc require this flag to be set before the __sync
builtin atomic compare and swap will support 128-bit values. If the
flag is required this check adds the flag to the CFLAGS.
2014-12-04 14:25:53 -07:00
Howard Pritchard
dc311e3a4b minor ugni config cleanup 2014-12-04 12:16:55 -07:00
Howard Pritchard
53dd5b6379 minor cray pmi config cleanup 2014-12-04 11:04:02 -07:00
Nathan Hjelm
fe787512d8 Add support for __sync builtin compare and swap on 128-bit values 2014-12-04 09:23:51 -07:00
Nathan Hjelm
b2b58b31a2 Add support for 128-bit compare and swap on x86_64 when available.
A 128-bit compare-and-swap will enable a better atomic lifo implementation
that uses the pointer + counter method to avoid ABA issues. This commit
adds configury to check for the instruction (cmpxchg16b) and adds an
implementation that uses the __int128 type available in C99.
2014-12-04 08:53:28 -07:00
Howard Pritchard
c67afadcfc Merge pull request #289 from hppritcha/topic/remove_pmi
Topic/remove pmi
2014-12-03 16:58:35 -07:00
Jeff Squyres
4e8ea6f716 tm: add proper libraries for static builds
Ensure to set the proper WRAPPER_EXTRA flags for static builds.
2014-12-03 13:32:56 -08:00
Jeff Squyres
92c2ff91ec Revert "Cleanup static build requirements by adding the wrapper flags back to the component configure.m4's. Minor cleanup of the lsf configure logic."
This reverts commit open-mpi/ompi@32bf0e7b7e.
2014-12-03 13:15:20 -08:00
Howard Pritchard
191fe0f949 alps configury changes
Clean up the orte_check_alps.m4.  There was a little of
unnecesary stuff for handling cle 5, since it wasn't actually
doing the right thing, which would be to use pkg-config to
find dependencies both for dynamic and static linking.

Decouple the searching for alps libs, etc. from cray pmi.

Switch the alps ess  and alps odls components' config files
to use the ALPS m4 macro.

alps configury fixes

Improve a check for detecting CLE release.
Improve an error message.
2014-12-03 09:44:17 -07:00
Ralph Castain
32bf0e7b7e Cleanup static build requirements by adding the wrapper flags back to the component configure.m4's. Minor cleanup of the lsf configure logic. 2014-12-03 07:14:06 -08:00
Ralph Castain
0f94be1268 Revert "If someone specifically asks for knem support and we can't do it, then we really should abort."
This reverts commit 6287d43c47.
2014-12-03 07:10:54 -08:00
Artem Polyakov
859b9f951f Add "-I$srcdir/opal/libltdl/" so conftest will allways set lt_dladvise. 2014-12-03 08:29:07 +06:00
Jeff Squyres
c6f222a5af configury: add "./configure V=1" verbose mode
Currently only shows whether opal_mca.m4 decides whether to build a
component or not.  This will be helpful in debugging a remote user's
setup that somehow, mysteriously decides not to build a specific
component.
2014-12-02 17:50:44 -08:00
Jeff Squyres
ed6c15be89 configury: whitespace and shell quoting cleanup
Remove extra whitespace, change foo="$bar" to foo=$bar,
and change one instance of "$foo" = "1" to $foo -eq 1.
2014-12-02 10:43:23 -08:00
Jeff Squyres
f229dcd1bb configury: fix lt_dladvise_init grep test
Change the CPPFLAGS to just -I$srcdir, and change the include file to
check to be just opal/libltdl/ltdl.h.  Do this because the CPPFLAGS
are passed to the preprocessor, and the C program that is passed
through the preprocessor is basically:

    #include <opal/libltdl/ltdl.h>

Using the proper -I covers both VPATH and non-VPATH cases.
2014-12-02 10:42:57 -08:00
Ralph Castain
6287d43c47 If someone specifically asks for knem support and we can't do it, then we really should abort. 2014-12-01 09:47:47 -08:00
Gilles Gouaillardet
9d9d05b22d configury: fix opal_config_pthreads when -lrt is set
the test program was successful without -pthread if -lrt is used.
-pthread *is* required in order to correctly handle
the pthread_atfork function.
2014-12-01 19:02:31 +09:00
Ralph Castain
f4aa94dddf Keep trying changes to lsf configury 2014-11-30 11:50:30 -08:00
George Bosilca
6772b07792 Only use RDTSCP if supported by the processor.
Conflicts:
	opal/include/opal/sys/amd64/timer.h
2014-11-27 11:29:47 -05:00
Nathan Hjelm
1b564f62bd Revert "Merge pull request #275 from hjelmn/btlmod"
This reverts commit ccaecf0fd6, reversing
changes made to 6a19bf85dd.
2014-11-19 23:22:43 -07:00
Nathan Hjelm
bf7daac388 btl/openib: add atomic operation support 2014-11-19 11:33:04 -07:00
Ralph Castain
0338bc80b7 Add the LSF libraries as required for static build 2014-11-19 09:38:49 -08:00
Jeff Squyres
225c684ccc opal_check_portals.m4: remove this unused file
It looks like OPAL_CHECK_PORTALS is not used anywhere; it looks like
it has been completely replaced by opal_check_portals4.m4
(OPAL_CHECK_PORTALS4).
2014-11-16 12:44:14 -08:00
Howard Pritchard
07263889d5 Delete old gni config file
Delete a legacy ompi_check_gni m4 file.  No longer used.
2014-11-04 16:20:35 -07:00
Howard Pritchard
67b0f8de7f separate out cray pmi config
The mixing of the Slurm PMI and Cray PMI configure was getting
messy and dangerous - developers working on Slurm PMI often don't
have access to Cray PMI, etc.

This mod pulls out the Cray PMI configure into a separate m4 file.
Cray pmi is now configured as follows:

1) on Cray CLE 5 and higher, Cray PMI is auto detected.  pkg-config
   is used to resolve the necessary CPP flags, link flags and libs,
   etc.  Nothing needs to be added to the configure line to pick up
   Cray PMI.

2) on legacy Cray CLE 4 systems with PMI 4.X, Cray PMI is also
   auto detected.

3) on legacy Cray CLE 4 systems with PMI 5.X Cray PMI can't be auto-detected
   owing to changes in the PMI pkg-config file which result in pkg-config
   returning an error owing to a dependency of PMI on newer versions of ALPS
   installs that are not present on CLE 4. So, for those falling in to this
   situation, the --with-cray-pmi=(DIR) method needs to be used.

   DIR specifies the Cray PMI install directory.  The configure file looks
   for required alps libraries first in /usr/lib/alps, then in
   /opt/cray/xe-sysroot/default/usr/lib/alps.
2014-11-04 15:25:25 -07:00
Jeff Squyres
6164dc4960 fortran: fix linking with Fortran sentinel values
In OMPI 1.8 and 1.8.1, we didn't allow gfortran to use the ignore-TKR
style "mpi" Fortran module (which is written in Fortran).  Instead,
gfortran used the TKR style "mpi" module, which is written in C.

In OMPI 1.8.2, we removed the gfortran restriction (for suitably
modern gfortran -- i.e., >= 4.9).  This allowed gfortran to use the
ignore-TKR style "mpi" module, but exposed a bug where MPI Fortran
sentinel values wouldn't be linked properly on OS X.  The solution is
to use ```-Wl,-flat_namespace``` (see the OS X ld(1) man page for
details) when both building the libraries and in the wrapper
compilers.

Thanks to Github user yafshar for rasising the issue.

Fixes #259.
2014-11-04 14:30:28 -05:00
Ralph Castain
c2454e7fbe Require -D_REENTRANT flag for both CFLAGS and CPPFLAGS if building under Solaris 2014-11-03 21:14:02 -08:00
Jeff Squyres
8c3fb41eb7 opal_check_ident.m4: make the test match what we do in the code base
Per #257, the configure test used to check:

```c
```

But out in the code base, we actually do this:

```c
// ...
```

This commit updates the configure test to ```#define``` a string and
then use that with the various ident strategies.

Fixes #257
2014-11-03 12:17:19 -08:00
Jeff Squyres
81dafbdba1 opal_check_pmi.m4: trivial whitespace cleanup; no code changes 2014-11-01 04:02:23 -07:00
Jeff Squyres
b7e64757be pkg.m4: "Open MPI", not "OpenMPI" :-) 2014-11-01 03:52:41 -07:00
Howard Pritchard
9e382d634d add new function to pkg.m4 to help static linking
There is a continued interest in being able to do static
linking of executables.  When using pkg-config to determine
linking requirements, the default behavior is to only
specify libraries required for dynamic linking.

In many cases, it suffices even for static linking to
use

pkg-config --libs package

to obtain the linkage string required for ld.  However, for
libraries that have dependencies on non-standard libraries,
this may not be the case.  The cray PMI library is such a case.

On a Cray CLE 5.X system, for example

pkg-config --libs cray-pmi

returns a string like

-L/opt/cray/pmi/5.0.2-1.0000.9906.117.2.ari/lib64 -lpmi

whereas

pkgconfig --static --libs cray-pmi

returns a string (modified for git commits) like

-L/opt/cray/pmi/5.0.2-1.0000.9906.117.2.ari/lib64
-L/opt/cray/ugni/5.0-1.0000.8563.255.10.ari/lib64
-L/opt/cray/alps/6.0.0-2.0000.8544.102.21.ari/lib64
-L/opt/cray/wlm_detect/1.0-1.0000.48964.8.2.ari/lib64
-L/opt/cray/rca/1.0.0-2.0000.49383.133.60.ari/lib64
-lpmi -lpthread -lalpslli -lpthread -lwlm_detect
-lugni -lpthread -lalpsutil -lpthread -lrca

Unfortunately the pkg.m4 does not contain a function for adding
the --static option to PKG_CHECK_MODULES. This commit defines
a new function, PKG_CHECK_MODULES_STATIC, which in addition to
defining the $1_CFLAGS and $1_LIBS variables defined by PKG_CHECK_MODULES,
also defines a $1_STATIC_LIBS.
2014-10-31 14:17:23 -06:00
Jeff Squyres
491830b7b5 configury: remove deprecated --with-openib* configure options
These were deprecated in the v1.7/v1.8 series; they are being removed
for the v1.9 series.
2014-10-29 06:02:33 -07:00
Jeff Squyres
aefe3f2edd configury: fixes for OPAL|ORTE_SET_LIB_PREFIX
We must also set the static library filenames properly (i.e., obey the
$FRAMEWORK_LIB_PREFIX that was set).  Hence, set the prefixes earlier
in configure.ac, and update OPAL_MCA to set the static library names
properly.
2014-10-28 17:13:14 -07:00
Ralph Castain
4f0c1ae8d9 Continue cleanup of the PMI config code. Eliminate the multiple calls to check for pmi1 and pmi2 - we must check it only once to get the pmix components to build only in the correct situations. Ensure we set the wrapper flags so we handle static builds correctly. 2014-10-27 20:37:33 -07:00
Ralph Castain
aa207ad2f3 Per Gilles, we really should set the reentrant flags when building Java support 2014-10-24 10:20:42 -07:00
Gilles Gouaillardet
8da6c14e06 configury: fix a typo in config/opal_check_pmi.m4 2014-10-24 13:31:36 +09:00
Ralph Castain
75d8a7f25b Refactor the PMI configure check logic to be a lot cleaner and simpler. 2014-10-23 18:35:18 -07:00
Ralph Castain
894acb0aa8 configury: new OPAL_SET_MCA_PREFIX/ORTE_SET_MCA_CMD_LINE_ID macros
These two macros set the MCA prefix and MCA cmd line id,
   respectively.  Specifically, MCA parameters will be named
   PREFIX<foo> in the environment, and the cmd line will use
   -ID foo bar.

   These macros must be called during configure.ac and a value
   supplied. In the case of Open MPI, the values given are
   PREFIX=OMPI_MCA_ and ID=mca.

   Other projects (such as ORCM) will call these macros with
   their own unique values.  For example, ORCM uses PREFIX=ORCM_MCA_
   and ID=omca

   This scheme is necessary to allow running Open MPI applications under
   systems that use their own versions of ORTE and OPAL.  For example,
   when running OMPI applications under ORCM, we need the MCA params passed
   to the ORCM daemons to be separated from those recognized by the OMPI application.
2014-10-22 18:57:40 -07:00
Jeff Squyres
c22e1ae33b configury: new OPAL_SET_LIB_PREFIX/ORTE_SET_LIB_PREFIX macros
These two macros set the prefix for the OPAL and ORTE libraries,
respectively.  Specifically, the OPAL library will be named
libPREFIXopen-pal.la and the ORTE library will be named
libPREFIXopen-rte.la.

These macros must be called, even if the prefix argument is empty.

The intent is that Open MPI will call these macros with an empty
prefix, but other projects (such as ORCM) will call these macros with
a non-empty prefix.  For example, ORCM libraries can be named
liborcm-open-pal.la and liborcm-open-rte.la.

This scheme is necessary to allow running Open MPI applications under
systems that use their own versions of ORTE and OPAL.  For example,
when running MPI applications under ORTE, if the ORTE and OPAL
libraries between OMPI and ORCM are not identical (which, because they
are released at different times, are likely to be different), we need
to ensure that the OMPI applications link against their ORTE and OPAL
libraries, but the ORCM executables link against their ORTE and OPAL
libraries.
2014-10-22 10:32:19 -07:00
Artem Polyakov
ce7102cb54 One more fix for libltdl configuration.
Remove unneeded "-I" statements from conftest compilation command.
2014-10-21 21:06:28 +07:00
Nathan Hjelm
13643f5b6e btl/vader: improved single-copy support
This commit makes the folowing changes:

 - Add support for the knem single-copy mechanism. Initially vader will only
   support the synchronous copy mode. Asynchronous copy support may be added
   int the future.

 - Improve Linux cross memory attach (CMA) when using restrictive ptrace
   settings. This will allow Open MPI to use CMA without modifying the system
   settings to support ptrace attach (see /etc/sysctl.d/10-ptrace.conf).

 - Allow runtime selection of the single copy mechanism. The default behavior
   is to use the best available. The priority list of single-copy mehanisms is
   as follows: xpmem, cma, and knem.

 - Allow disabling support for kernel-assisted single copy.

 - Some tuning and bug fixes.
2014-10-20 11:44:52 -06:00
Artem Polyakov
d5adb0fa82 Fix libltdl VPATH configuration. 2014-10-17 22:40:32 +07:00
Artem Polyakov
f12ed3efa3 Fix building system: correct libltdl check for advise capability. 2014-10-17 12:59:44 +07:00
Devendar Bureddy
cbb3e95ce9 OSHMEM: Fix application abort
register on_exit() hook to know exit status inorder to
skip shmem_finalize destructor in case of non-zero exit status
2014-10-14 21:07:28 +03:00
Nathan Hjelm
083a659217 Correct some typos in Cray PMI detection 2014-10-14 10:28:36 -06:00
Nathan Hjelm
169a1866b8 Modify Cray PMI check to detect PMI on older systems 2014-10-09 17:01:31 -06:00
Ralph Castain
b1a58726ac Cleanup the PMI m4 syntax with respect to -a, and look for libpmi* so we can pickup both .a, .la, and whatever other extensions that particular system might use. 2014-10-09 14:04:43 -07:00
Nadezhda Kogteva
ffa8674e01 Fix bugs in PMI configure: set correct include path, fix test command with multiple conditions. 2014-10-09 17:23:56 +03:00
Ralph Castain
9c027e6def Update the PMI configure logic to handle the oddball case where both lib and lib64 may exist, and the required files may be in one or the other of them. 2014-10-07 10:20:46 -07:00
Gilles Gouaillardet
399fc1bb3e configury: remove unneeded assignments 2014-10-06 16:36:03 +09:00
Jeff Squyres
413e775dbf version configury: make dist now works
Update the VERSION file scheme:

* Remove "want_repo_rev".
* Add "tarball_version".

All values are now always included (major, minor, release, greek,
repo_rev).  However, configure.ac now runs "opal_get_version.sh
... --tarball", which will return the value of tarball_version (if it
is non-empty) or the "full" version string (i.e.,
"major.minor.releasegreek").
2014-10-02 11:32:54 -07:00
Jeff Squyres
8468424f45 distscript: remove configure.params and autogen.subdirs kruft
Remove configure.params support: configure.params hasn't been used in
years.

Also remove autogen.subdirs support; those should really be handled by
their respective Makefile.am's.
2014-10-02 11:32:54 -07:00
Jeff Squyres
cfcf3fa42d distscript: whitespace cleanup, remove ancient kruft
There was some (almost) wholly-commented out code in here that reaches
back to the beginning of the project.  Just delete it.
2014-10-02 11:32:54 -07:00
Jeff Squyres
99c39991cd infrastructure: first cut at updates for git
This is a first cut at updating various infrastructure for git.  There
will definitely be more commits; some of the scripts require
committed/pushed code (e.g., the various make-tarball scripts).  So
it's not possible to know if we got it right without committing/pushing.
2014-10-01 16:32:52 -07:00
Ralph Castain
9e35f80ab6 Don't multiply define WANT_PMI_SUPPORT and friends. Turns out they weren't being used anywhere anyway, so no point in defining them at all
This commit was SVN r32822.
2014-09-30 20:43:25 +00:00
Jeff Squyres
d4e2809531 version: always use all 3 version numbers
In all previous releases, the version number would be "A.B.C" unless C
was 0, in which case it would be "A.B".  This commit changes that
scheme to always be "A.B.C", even if C==0.

Hence, v1.9.0 will be the first release where this new scheme is evident.

This commit was SVN r32816.
2014-09-30 15:54:18 +00:00
Rolf vandeVaart
16d6e82ed2 Fix issue repored on User list. Error out when --with-cuda and --disable-dlopen are together.
This commit was SVN r32808.
2014-09-29 13:25:17 +00:00
Jeff Squyres
91114c22d4 fortran: strengthen the storage_size() check
It's not enough to AC_COMPILE_IFELSE, do AC_LINK_IFELSE to really make
sure the compiler suite supports it.

Refs trac:4917

This commit was SVN r32802.

The following Trac tickets were found above:
  Ticket 4917 --> https://svn.open-mpi.org/trac/ompi/ticket/4917
2014-09-26 18:17:55 +00:00
Rolf vandeVaart
399dc3db43 Code to check for managed memory. Configure support also.
This commit was SVN r32801.
2014-09-26 16:24:45 +00:00
Gilles Gouaillardet
b1c4daa956 configury: silence warning on Solaris
* remove config/ompi_config_solaris_threads.m4 which was dead code
 * check if pthreads work "as is" on all platforms including Solaris
   (FWIW, the test should have been skipped if Solaris threads are used
    and not if configure is ran on a Solaris box)

Refs trac:4911

This commit was SVN r32792.

The following Trac tickets were found above:
  Ticket 4911 --> https://svn.open-mpi.org/trac/ompi/ticket/4911
2014-09-25 07:26:16 +00:00
Gilles Gouaillardet
5d0e65085f configury: silence warning on Solaris
revert r32501

Refs trac:4911

This commit was SVN r32791.

The following SVN revision numbers were found above:
  r32501 --> open-mpi/ompi@0afed999cd

The following Trac tickets were found above:
  Ticket 4911 --> https://svn.open-mpi.org/trac/ompi/ticket/4911
2014-09-25 07:17:58 +00:00
Jeff Squyres
d13034d0b0 fortran: add configury to check for storage_size()
gfortran 4.8 does not support storage_size() on all relevant types
that we need.  So add a configure test to check and see if the
compiler's storage_size() intrinsic supports enough types for us to do
MPI_SIZEOF.

Also remove an accidentally redundant check for fortran INTERFACE.

Refs trac:4917

This commit was SVN r32790.

The following Trac tickets were found above:
  Ticket 4917 --> https://svn.open-mpi.org/trac/ompi/ticket/4917
2014-09-25 00:17:29 +00:00
Artem Polyakov
f2e586980b Fix timing framework:
1. Fixes according to (http://www.open-mpi.org/community/lists/devel/2014/09/15869.php)
2. Force mpisync:rank0 to gather results. Now sync info is written by rank0 to the output file.
3. Improve mpirun_prof: 1) adopt to the environment (SLURM/TORQUE); 2) recognize some noteset-related mpirun options.

This commit was SVN r32772.
2014-09-23 12:59:54 +00:00
Jeff Squyres
d7eaca83fa Fortran: Fix MPI_SIZEOF. What a disaster. :-(
What started as a simple ticket ended up reaching the way up to the
MPI Forum.
    
It turns out that we are supposed to have MPI_SIZEOF for all Fortran
interfaces: mpif.h, the mpi module, and the mpi_f08 module.
    
It further turns out that to properly support MPI_SIZEOF, your Fortran
compiler *has* support the INTERFACE keyword and ISO_FORTRAN_ENV.  We
can't use "ignore TKR" functionality, because the whole point of
MPI_SIZEOF is that the implementation knows what type was passed to it
("ignore TKR" functionality, by definition, throws that information
away).  Hence, we have to have an MPI_SIZEOF interface+implementation
for all intrinsic types, kinds, and ranks.

This commit therefore adds a perl script that generates both the
interfaces and implementations for MPI_SIZEOF in each of mpif.h, the
mpi module, and mpi_f08 module (yay consolidation!).

The perl script uses the results of some new configure tests:

* check if the Fortran compiler supports the INTERFACE keyword
* check if the Fortran compiler supports ISO_FORTRAN_ENV
* find the max array rank (i.e., dimension) that the compiler supports

If the Fortran compiler supports both INTERFACE and ISO_FORTRAN_ENV,
then we'll build the MPI_SIZEOF interfaces.  If not, we'll skip
MPI_SIZEOF in mpif.h and the mpi module.  Note that we won't build the
mpi_f08 module -- to include the MPI_SIZEOF interfaces -- if the
Fortran compiler doesn't support INTERFACE, ISO_FORTRAN_ENV, and a
whole bunch of ther modern Fortran stuff.

Since MPI_SIZEOF interfaces are now generated by the perl script, this
commit also removes all the old MPI_SIZEOF implementations (which were
laden with a zillion #if blocks).

cmr=v1.8.3

This commit was SVN r32764.
2014-09-19 13:44:52 +00:00
Jeff Squyres
0c98cf709e opal_get_version.m4: use better "git log" command
For when you have a git repository, this is a bit more succinct form
of getting a git hash of the HEAD.

This commit was SVN r32758.
2014-09-18 21:03:31 +00:00
Jeff Squyres
cf56a369c2 fortran: configure test for "optional" keyword was too aggressive
After discussions with Craig, it looks like the check in this
configure test was too aggressive and based on a prior mpi_f08
implementation model.  We don't use "value" any more, and we also
don't pass optional parameters back to C code, so this test was
checking far more than it needed to... in a non-standard way (which
breaks in the Intel 2015 Fortran compiler).  All we ''really'' need is
to check whether the compiler supports the "optional" keyword.  So
make the test ''much'' simpler and just check whether ''optional''
compiles successfull or not.

Reviewed by Craig Rasmussen

cmr=v1.8.3:reviewer=ompi-rm1.8

This commit was SVN r32752.
2014-09-17 22:10:11 +00:00
Ralph Castain
dfb952fa78 [Contribution from Artem - moved it to svn from git for him]
Replace our old, clunky timing setup with a much nicer one that is only available if configured with --enable-timing. Add a tool for profiling clock differences between the nodes so you can get more precise timing measurements. I'll ask Artem to update the Github wiki with full instructions on how to use this setup.

This commit was SVN r32738.
2014-09-15 18:00:46 +00:00
Jeff Squyres
66aeadacff opal_search_libs: correctly AC_DEFINE results of search
1. It is not sufficient to put the result of m4_toupper() in a
variable and use that variable as the variable name in
AC_DEFINE_UNQUOTED.  Instead, just use m4_toupper() directly in
AC_DEFINE_UNQUOTED.  Also, save the result value in a "permanent"
variable that isn't erased, just in case autoconf decides to be lazy
about instantiating the body AC_DEFINE_UNQUOTED and move it later
(this is probably overkill :-) ).
1. Use the OMPI Way of always defining macros (to 0 or 1).  Then also
slightly change the logic in util/basename.c to just check
OPAL_HAVE_DIRNAME (because it will always be defined).

Refs trac:4894

This commit was SVN r32723.

The following Trac tickets were found above:
  Ticket 4894 --> https://svn.open-mpi.org/trac/ompi/ticket/4894
2014-09-13 00:28:30 +00:00
Jeff Squyres
01e62b1994 orte_check_lsf.m4: improve the search for LSF libraries
Based on a patch from Joshua Randall, improve the search for LSF
libraries in orte_check_lsf.m4.  This improvement theorhetically
allows the LSF libraries to work in a variety of OSs by properly
searching for its dependent libraries using a variety of library
names.

Fixes trac:4889.

This commit was SVN r32722.

The following Trac tickets were found above:
  Ticket 4889 --> https://svn.open-mpi.org/trac/ompi/ticket/4889
2014-09-12 23:52:18 +00:00
Jeff Squyres
2024d28a65 opal_search_libs.m4: remove redundant AC_MSG_CHECKING/RESULT
The AC_MSG_CHECKING/AC_MSG_RESULT in OPAL_SEARCH_LIBS_CORE were
generating recursive redundant output (i.e., AC_SEARCH_LIBS already
outputs "checking for library containing X... -lY".

Also add the "uppername" logic to OPAL_SEARCH_LIBS_COMPONENT so that
these two macros stay symmetrical.

Refs trac:4894.

This commit was SVN r32721.

The following Trac tickets were found above:
  Ticket 4894 --> https://svn.open-mpi.org/trac/ompi/ticket/4894
2014-09-12 23:27:33 +00:00
Ralph Castain
ec51cbab9f We are failing to use the system dirname function because we are not correctly flagging that we found it. Modify opal_search_libs_core to set an "opal_have_foo" flag to indicate that we found the specified function, and then modify the have_dirname check to look for it.
cmr=v1.8.3:reviewer=jsquyres

This commit was SVN r32669.
2014-09-04 16:10:38 +00:00
Ralph Castain
1c4870357b Per patch submitted by J. Randall, add missing library to LSF integration
cmr=v1.8.3:reviewer=rhc

This commit was SVN r32661.
2014-09-02 00:38:07 +00:00
Howard Pritchard
51c73f116b switch check for ugni to use pkg-config
deprecate with-ugni in lanl/cray_xe6 platform file

This commit was SVN r32625.
2014-08-28 22:03:41 +00:00
Gilles Gouaillardet
d440ee80a4 oshmem configury: fix a test
Fix a test in r32590

Refs trac:4868

This commit was SVN r32594.

The following SVN revision numbers were found above:
  r32590 --> open-mpi/ompi@36b315db2d

The following Trac tickets were found above:
  Ticket 4868 --> https://svn.open-mpi.org/trac/ompi/ticket/4868
2014-08-25 06:57:30 +00:00
Gilles Gouaillardet
df8baf685f oshmem configury: fix a typo
Fix a typo in r32590

Refs trac:4868

This commit was SVN r32593.

The following SVN revision numbers were found above:
  r32590 --> open-mpi/ompi@36b315db2d

The following Trac tickets were found above:
  Ticket 4868 --> https://svn.open-mpi.org/trac/ompi/ticket/4868
2014-08-25 04:41:56 +00:00
Jeff Squyres
36b315db2d oshmem configury: tighten up the pshmem checks
Make the checks for macro weak symbols be equivalent to the checks for
weak symbols.

Also fix up several OSHMEM configure checks:

* fix an errant AC_MSG_REQUEST
* don't check for profiling ability during configure options checks.
  Instead, defer it to later, when we have weak symbol check results.
* don't directly call _FOO macros from the top level
* make setting up OSHMEM profiling similar to MPI profiling: create
  OSHMEM_SETUP_PROFILING macro
* cache the results of checking for macro weak symbols (for parity
  with the weak symbol check -- although we should really
  revisit/audit the whole cache-checking scheme throughout all m4
  code; it may well be inconsistently used)
* add some more [] m4 quoting, even in the original C weak symbols test
* style: fix some whitespace errors

Refs trac:4868

This commit was SVN r32590.

The following Trac tickets were found above:
  Ticket 4868 --> https://svn.open-mpi.org/trac/ompi/ticket/4868
2014-08-23 10:50:14 +00:00
Ralph Castain
aec5cd08bd Per the PMIx RFC:
WHAT:    Merge the PMIx branch into the devel repo, creating a new
               OPAL “lmix” framework to abstract PMI support for all RTEs.
               Replace the ORTE daemon-level collectives with a new PMIx
               server and update the ORTE grpcomm framework to support
               server-to-server collectives

WHY:      We’ve had problems dealing with variations in PMI implementations,
               and need to extend the existing PMI definitions to meet exascale
               requirements.

WHEN:   Mon, Aug 25

WHERE:  https://github.com/rhc54/ompi-svn-mirror.git

Several community members have been working on a refactoring of the current PMI support within OMPI. Although the APIs are common, Slurm and Cray implement a different range of capabilities, and package them differently. For example, Cray provides an integrated PMI-1/2 library, while Slurm separates the two and requires the user to specify the one to be used at runtime. In addition, several bugs in the Slurm implementations have caused problems requiring extra coding.

All this has led to a slew of #if’s in the PMI code and bugs when the corner-case logic for one implementation accidentally traps the other. Extending this support to other implementations would have increased this complexity to an unacceptable level.

Accordingly, we have:

* created a new OPAL “pmix” framework to abstract the PMI support, with separate components for Cray, Slurm PMI-1, and Slurm PMI-2 implementations.

* Replaced the current ORTE grpcomm daemon-based collective operation with an integrated PMIx server, and updated the grpcomm APIs to provide more flexible, multi-algorithm support for collective operations. At this time, only the xcast and allgather operations are supported.

* Replaced the current global collective id with a signature based on the names of the participating procs. The allows an unlimited number of collectives to be executed by any group of processes, subject to the requirement that only one collective can be active at a time for a unique combination of procs. Note that a proc can be involved in any number of simultaneous collectives - it is the specific combination of procs that is subject to the constraint

* removed the prior OMPI/OPAL modex code

* added new macros for executing modex send/recv to simplify use of the new APIs. The send macros allow the caller to specify whether or not the BTL supports async modex operations - if so, then the non-blocking “fence” operation is used, if the active PMIx component supports it. Otherwise, the default is a full blocking modex exchange as we currently perform.

* retained the current flag that directs us to use a blocking fence operation, but only to retrieve data upon demand

This commit was SVN r32570.
2014-08-21 18:56:47 +00:00
Gilles Gouaillardet
2df0ede613 configury: disable pshmem if buggy compiler is detected
PGI compilers older that 2013 have a buggy preprocessor
that does not support pragma defined in a macro called
itself called from an other macro

cmr=v1.8.2:reviewer=jsquyres

This commit was SVN r32551.
2014-08-19 05:52:34 +00:00
Jeff Squyres
7a8c3ed0d1 opal_config_asm.m4: fix typo in output message
Thanks to Paul Hargrove for spotting the typo.

cmr=v1.8.3:reviewer=rhc

This commit was SVN r32505.
2014-08-11 13:28:17 +00:00
Gilles Gouaillardet
0afed999cd silence warnings
on solaris 10 with gcc 3.4.3, no link flags is required
to use pthreads. First try to link without any flags.

This commit was SVN r32501.
2014-08-11 07:41:54 +00:00
Jeff Squyres
a741406ad6 opal_search_libs.m4: improvements from Dave Goodell's review
Unfortunately, I didn't see Dave's review until CMR #4841 went in.
Oops.

This commit is a handful of minor m4 improvements to that original
r32447 commit.  It can go to v1.8.3, just to minimize drift between
trunk and v1.8.

Reviewed by Dave Goodell.

cmr=v1.8.3:reviewer=ompi-rm1.8

This commit was SVN r32477.

The following SVN revision numbers were found above:
  r32447 --> open-mpi/ompi@c6d9bf906e
2014-08-08 22:22:03 +00:00
Jeff Squyres
c6d9bf906e configury: ensure wrapper static LIBS is filled properly
In core library portions of the configury (e.g., top-level
configure.ac itself), we were calling AC_CHECK_LIB and
OPAL_CHECK_FUNC_LIB to check for various libraries.

'''SIDENOTE:''' It turns out that modern Autoconf has AC_SEARCH_LIBS,
which does just about exactly what OPAL_CHECK_FUNC_LIB does.  So this
commit effectively replaces OPAL_CHECK_FUNC_LIB with AC_SEARCH_LIBS.

However, we never bothered to add these found libraries to the wrapper
compiler list of libraries used for static linking (doh!).  We've been
getting lucky for quite a while that components were adding the same
libraries to their wrapper compiler LIBS list.  

This is problematic, however, if we don't build some of these
components.  For example, Paul Hargrove noticed that if he configured
with --disable-shared --enable-static --disable-io-romio, ROMIO was no
longer adding some libraries to the wrapper LIBS list -- libraries
that just happened to also be needed by core OPAL/ORTE/OMPI layers.

The solution is not to use AC_CHECK_LIB or OPAL_CHECK_FUNC_LIB, but
use a pair of new macros:

 * OPAL_SEARCH_LIBS_CORE: a wrapper around AC_SEARCH_LIBS.  If we add
   something to $LIBS, then also add it to the wrapper list of static
   libraries.  This is the main piece of functionality that was
   wrong/missing.
 * OPAL_SEARCH_LIBS_COMPONENT: similar to OPAL_SEARCH_LIBS_CORE, but
   instead of directly adding it to the wrapper list of static
   libaries, add it to <framework>_<component>_LIBS (which eventually
   gets slurped up into the wrapper list of static libraries.  See the
   lengthy comment in config/opal_setup_wrappers.m4 near the beginning
   of OPAL_SETUP_WRAPPER_INIT() for a more detailed explanation).
   Most components did this correctly already, but one or two weren't
   right, so I implemented this second macro quite similar to the
   first and put it everywhere we already used AC_SEARCH_LIBS or
   OPAL_CHECK_FUNC_LIB.

This needs to soak for a day or two on the trunk before moving to the
v1.8 branch.

Refs trac:4834

cmr=v1.8.2:reviewer=ggouaillardet

This commit was SVN r32447.

The following Trac tickets were found above:
  Ticket 4834 --> https://svn.open-mpi.org/trac/ompi/ticket/4834
2014-08-07 23:54:45 +00:00
Howard Pritchard
52362876b6 add pkg.m4 for PKG_CHK_MODULES, etc. macro
This commit was SVN r32435.
2014-08-05 21:43:58 +00:00
Ralph Castain
adeecad274 Clarify when oshmem is enabled/disabled. Thanks to Paul Hargrove for the language
cmr=v1.8.3:reviewer=jsquyres

This commit was SVN r32431.
2014-08-05 14:52:18 +00:00
Ralph Castain
1e93e85403 Cleanup some autoconf messages - thanks to Paul Hargrove for noting them
cmr=v1.8.3:reviewer=jsquyres

This commit was SVN r32429.
2014-08-05 14:48:42 +00:00
Ralph Castain
747c585c39 Move the OPAL_ENABLE_PROGRESS_THREADS definition to opal_configure_options.m4
This commit was SVN r32405.
2014-08-01 18:11:36 +00:00
Ralph Castain
4ba599a3ad And one more...
This commit was SVN r32404.
2014-08-01 17:12:35 +00:00
Ralph Castain
9633c917a4 Rename the .m4 files to reflect the move to opal so non-MPI projects properly see them
This commit was SVN r32403.
2014-08-01 17:03:34 +00:00
Jeff Squyres
295016c869 fortran: Revert r32354
r32354 breaks gfortran if you --enable-mpi-fortran, because it assumes
the value "all", when then errors out of configure because gfortran
can't currently build the mpi_f08 bindings.

Need to think about what the Right solution is here...

This commit was SVN r32369.

The following SVN revision numbers were found above:
  r32354 --> open-mpi/ompi@6a44eb6c82
2014-07-30 22:48:49 +00:00
Gilles Gouaillardet
6a44eb6c82 Fortran: abort configure is requested binding cannot be built
as pointed by Paul Hargrove, abort configure is the fortran
bindings explicitly requested with --enable-mpi-fortran=...
cannot be built

cmr=v1.8.2:reviewer=jsquyres

This commit was SVN r32354.
2014-07-30 07:14:56 +00:00
Ralph Castain
552c9ca5a0 George did the work and deserves all the credit for it. Ralph did the merge, and deserves whatever blame results from errors in it :-)
WHAT:    Open our low-level communication infrastructure by moving all necessary components (btl/rcache/allocator/mpool) down in OPAL

All the components required for inter-process communications are currently deeply integrated in the OMPI layer. Several groups/institutions have express interest in having a more generic communication infrastructure, without all the OMPI layer dependencies.  This communication layer should be made available at a different software level, available to all layers in the Open MPI software stack. As an example, our ORTE layer could replace the current OOB and instead use the BTL directly, gaining access to more reactive network interfaces than TCP.  Similarly, external software libraries could take advantage of our highly optimized AM (active message) communication layer for their own purpose.  UTK with support from Sandia, developped a version of Open MPI where the entire communication infrastucture has been moved down to OPAL (btl/rcache/allocator/mpool). Most of the moved components have been updated to match the new schema, with few exceptions (mainly BTLs where I have no way of compiling/testing them). Thus, the completion of this RFC is tied to being able to completing this move for all BTLs. For this we need help from the rest of the Open MPI community, especially those supporting some of the BTLs.  A non-exhaustive list of BTLs that qualify here is: mx, portals4, scif, udapl, ugni, usnic.

This commit was SVN r32317.
2014-07-26 00:47:28 +00:00
Jeff Squyres
4da3c85b54 fortran: revert Absoft-based fixes
Rever r32246, r32254, and 32255 -- they were fixing side-effects of
the real bug.  Real fix coming after this one.

This commit was SVN r32286.

The following SVN revision numbers were found above:
  r32246 --> open-mpi/ompi@08d2a1a48d
  r32254 --> open-mpi/ompi@232d4dbb7b
2014-07-22 21:49:22 +00:00
Gilles Gouaillardet
08d2a1a48d fortran: fix compile issue with ABSoft compilers
ABSoft compilers cannot compile a fortran subroutine
with the BIND(C, NAME="name") modifier *and* argument(s)
with the OPTIONAL modifier

This patch detects this unsupported feature and use
adhoc wrappers if it is missing

cmr=v1.8.2:reviewer=jsquyres

This commit was SVN r32246.
2014-07-15 10:41:11 +00:00
Ralph Castain
2cea8a279a Remove stale orcm reference
This commit was SVN r32221.
2014-07-11 19:00:28 +00:00
Jeff Squyres
0089ac20af Fortran: put type(c_ptr) interfaces in a separate file in the TKR mpi module
Older gfortran compilers (e.g., the gfortran that ships in RHEL5) do
not support ISO_C_BINDING, and therefore do not support the
TYPE(C_PTR) type.  As such, they cannot support the overloaded
interfaces for MPI_WIN_ALLOCATE_SHARED and MPI_SHARED_QUERY that are
mandated in MPI-3.

So we separate those interfaces out into a separate .F90 file that is
#include'd in the tkr mpi.F90 file.  In this separate .F90 file, we
use an #if to determine whether the compiler supports ISO_C_BINDING or
not.

Also re-jiggered the order of testing in ompi_setup_mpi_fortran.m4: we
now need to test whether the compiler supports ISO_C_BINDING even when
we're only building the mpi module (not strictly when we're building
the mpi_f08 module).

Finally, tweaked the use-mpi-tkr/Makefile.am to:

* Add some proper dependencies for mpi.F90
* Allow the general AM compilation to be used instead of supplying a
  specific rule for compiling mpi.F90

cmr=v1.8.2:ticket=trac:4736

This commit was SVN r32204.

The following Trac tickets were found above:
  Ticket 4736 --> https://svn.open-mpi.org/trac/ompi/ticket/4736
2014-07-10 19:10:03 +00:00
Mike Dubman
1b51e472ac MXM: update min required version for mxm as 2.1+
This commit was SVN r32193.
2014-07-10 13:16:57 +00:00
Ralph Castain
f3cb124e50 Revert r32082 and r32070 - the developer's conference has decided to go a different direction on the threaded progress effort. This will involve some degree of prototyping to understand the tradeoffs prior to making a final design decision, and so we'll hold off on the final change until that is completed.
This commit was SVN r32089.

The following SVN revision numbers were found above:
  r32070 --> open-mpi/ompi@12d92d0c22
  r32082 --> open-mpi/ompi@aa6438ef7a
2014-06-25 20:43:28 +00:00
Ralph Castain
12d92d0c22 Per the OMPI developer conference, remove the last vestiges of OMPI_USE_PROGRESS_THREADS
This commit was SVN r32070.
2014-06-24 17:05:11 +00:00
Jeff Squyres
f33cc84ac6 Fortran: disable the descriptor-based mpi_f08 prototype
It will come back someday.

cmr=v1.8.2:ticket=trac:4736

This commit was SVN r32044.

The following Trac tickets were found above:
  Ticket 4736 --> https://svn.open-mpi.org/trac/ompi/ticket/4736
2014-06-19 13:39:56 +00:00
Jeff Squyres
9ae8b44a44 ompi_fortran_check_bind_c.m4: Fix comment in existing .m4 file
cmr=v1.8.2:ticket=trac:4736

This commit was SVN r32043.

The following Trac tickets were found above:
  Ticket 4736 --> https://svn.open-mpi.org/trac/ompi/ticket/4736
2014-06-19 13:39:11 +00:00
Jeff Squyres
555073630e Fortran: remove the scripts from the use-mpi-tkr implementation
This is part one of several Fortran improvements and fixes.  This
first part removes the now-defunct scripts that are used to generate
the .f90 files in the use-mpi-tkr implementation, and just commits the
output from those scripts.  This makes long-term maintenance of the
use-mpi-tkr implementation simpler.

cmr=v1.8.2:reviewer=jsquyres:subject=Various Fortran fixes/improvements

This commit was SVN r32040.
2014-06-19 13:35:30 +00:00
Oscar Vega-Gisbert
cdf0bcc6d1 Java - define macro OSHMEM_SETUP_JAVA_BINDINGS
This commit was SVN r31983.
2014-06-11 21:49:31 +00:00
Ralph Castain
6f1320d5cd Cleanup the mess from r31810 - no way that could compile or avoid breaking the trunk. The Makefile's had to be added to oshmem_config_files.m4, and the Makefile.am's had not been updated to the new srcdir/builddir conventions. Also add svn:ignores
This commit was SVN r31811.

The following SVN revision numbers were found above:
  r31810 --> open-mpi/ompi@83bdebbf81
2014-05-19 04:14:54 +00:00
Ralph Castain
11faab1091 The final step of the RFC: convert the <foo>libdir and friends to fit their respective code areas, and equate them all at the top. Note that we can't entirely separate things as the opal_install_dirs framework can't handle separated locations for the various trees.
This commit was SVN r31679.
2014-05-08 02:01:35 +00:00
Ralph Castain
a8e2d6c3a6 The bulk of the remaining renaming changes, in one final glorious "blob". Thanks to Jeff for some help chasing down a few spots. Per chat with Jeff, we decided to cleanup a few things that were historical in nature:
top_ompi_srcdir  ->  OMPI_TOP_SRCDIR
top_ompi_builddir -> OMPI_TOP_BUILDDIR

We also split the srcdir/builddir flags according to their local tree (e.g., OPAL_TOP_SRCDIR), and tied them all together in configure.ac. Renamed ompi_ignore and ompi_unignore to be opal_<foo> as these are agnostic markers.

Only thing left is ompilibdir being treated similar to what we dif for srcdir/builddir. Coming soon.

This commit was SVN r31678.
2014-05-07 21:48:53 +00:00
Ralph Castain
2dbeb671d0 Fix typo impacting assembly support that came in during renaming
This commit was SVN r31676.
2014-05-07 16:22:11 +00:00
Ralph Castain
70ebf2efea One more level of subsubsubsubsubtitle...
This commit was SVN r31675.
2014-05-07 15:51:20 +00:00
Ralph Castain
74983c9002 Continue the renaming, fix ompi_show_subsubtitle
This commit was SVN r31674.
2014-05-07 15:45:47 +00:00
Ralph Castain
c6d2ff368d Per RFC, continue with renaming
This commit was SVN r31671.
2014-05-07 04:51:45 +00:00
Ralph Castain
a2bf976029 Per RFC, another round of changes
This commit was SVN r31669.
2014-05-07 03:16:59 +00:00
Ralph Castain
f4c31cae9b Per RFC, another round in the renaming game - nearly complete
This commit was SVN r31668.
2014-05-07 03:01:47 +00:00
Ralph Castain
a54dbb17d2 Per RFC, continue renaming project
This commit was SVN r31667.
2014-05-07 01:00:06 +00:00
Ralph Castain
4501285c26 Per RFC, continue the naming conversion
This commit was SVN r31665.
2014-05-06 23:34:33 +00:00
Ralph Castain
839c0eb55c Per RFC, continue the renaming effort
This commit was SVN r31664.
2014-05-06 21:16:29 +00:00
Ralph Castain
fdfb331e13 Per RFC, continue the renaming process
This commit was SVN r31663.
2014-05-06 20:53:55 +00:00
Ralph Castain
883fce4cba Per RFC, continue the build system renaming
This commit was SVN r31662.
2014-05-06 20:30:37 +00:00
Ralph Castain
8a0d6b4aa6 Per RFC, continue the joyous fun of the renaming exercise
This commit was SVN r31661.
2014-05-06 20:13:37 +00:00
Ralph Castain
bdf9aace69 Per RFC, continue with build system renaming
This commit was SVN r31658.
2014-05-06 19:37:10 +00:00
Ralph Castain
4f4d9dcd28 Per RFC, continue with build system renaming
This commit was SVN r31657.
2014-05-06 19:22:27 +00:00
Ralph Castain
deb0c6bb9a Per RFC, continue cleanup with minor changes to one file
This commit was SVN r31656.
2014-05-06 18:37:52 +00:00
Ralph Castain
3fd7cee70c Per RFC, continue cleanup with minor change to one file
This commit was SVN r31655.
2014-05-06 18:30:55 +00:00
Ralph Castain
9b88ec7cde Per RFC, continue cleaning up the build system
OMPI_C_WEAK_SYMBOLS  ->  OPAL_C_WEAK_SYMBOLS
  ompi_cv_c_weak_symbols  ->  opal_cv_c_weak_symbols

This commit was SVN r31654.
2014-05-06 18:03:08 +00:00
Jeff Squyres
9d19dec80a [ompi|opal]_setup_cxx.m4: ensure to use the C++ compiler (!)
We didn't AC_LANG_PUSH(C++) before checking to see if the compiler
supports -finline-functions, meaning that configure used the C
compiler for these checkes, not the C++ compiler.

Due to #2999, we have to fix both opal_setup_cxx.m4 and
ompi_setup_cxx.m4.

cmr=v1.8.2:reviewer=rolfv

This commit was SVN r31651.
2014-05-06 17:42:51 +00:00
Ralph Castain
ab83b9425a Complete the cleanup of this file
This commit was SVN r31650.
2014-05-06 16:57:34 +00:00
Ralph Castain
aaf2969e9b Fix comment and add copyright
This commit was SVN r31649.
2014-05-06 16:51:30 +00:00
Ralph Castain
002cd34013 Per RFC, continue the build system renaming
OMPI_C_GET_ALIGNMENT  -> OPAL_C_GET_ALIGNMENT
   ompi_cv_c_align_  ->  opal_cv_c_align_

This commit was SVN r31648.
2014-05-06 16:50:27 +00:00
Ralph Castain
2b7a3ae601 Per RFC, continue pecking away at the build system renaming
OMPI_CONFIG_SUBDIR  -> OPAL_CONFIG_SUBDIR
   OMPI_CONFIG_SUBDIR_ARGS  ->  OPAL_CONFIG_SUBDIR_ARGS

This commit was SVN r31647.
2014-05-06 16:27:38 +00:00
Ralph Castain
390d29733f Per RFC, continue renaming of build tools:
ompi_c_vendor  ->  opal_c_vendor
ompi_cv_c_compiler_vendor  ->  opal_cv_c_compiler_vendor

This commit was SVN r31646.
2014-05-06 15:01:34 +00:00
Ralph Castain
f60aadd989 Sigh - forgot to change name in Makefile.am
This commit was SVN r31645.
2014-05-06 14:35:14 +00:00
Ralph Castain
9d320c55dd Missed one file to be renamed
This commit was SVN r31642.
2014-05-06 03:47:18 +00:00
Ralph Castain
fdd35f301a Per RFC, next major step in cleaning up the build system naming patterns: rename files containing things used by the OPAL layer to be opal_foo.m4 instead of ompi_foo.m4. The ALPS plm is currently checking UGNI, so shift the check_ugni.m4 to orte for now.
This commit was SVN r31641.
2014-05-06 03:20:16 +00:00
Ralph Castain
29609577d5 Per RFC:
ompi_show_title  -> opal_show_title
    ompi_show_subtitle -> opal_show_subtitle

This commit was SVN r31638.
2014-05-05 22:35:23 +00:00
Ralph Castain
a1ae20fddb Per RFC: OMPI_CFLAGS_BEFORE_PICKY -> OPAL_CFLAGS_BEFORE_PICKY
- This line, and those below, will be ignored--

M    opal/mca/event/libevent2021/configure.m4
M    opal/mca/hwloc/hwloc172/configure.m4
M    configure.ac
M    config/opal_setup_libltdl.m4
M    config/opal_check_visibility.m4
M    config/opal_setup_cc.m4

This commit was SVN r31637.
2014-05-05 22:22:33 +00:00
Ralph Castain
425d4b9e81 Per RFC: OMPI_ENSURE_CONTAINS_OPTFLAGS -> OPAL_ENSURE_CONTAINS_OPTFLAGS
This commit was SVN r31636.
2014-05-05 22:02:39 +00:00
Ralph Castain
4def94900a Per RFC: OMPI_INSTALL_BINARIES -> OPAL_INSTALL_BINARIES
This commit was SVN r31634.
2014-05-05 21:43:05 +00:00
Jeff Squyres
08cf16e14f ompi_setup_mpi_fortran.m4: disable mpi_f08 if PROCEDURE isn't supported
Per https://svn.open-mpi.org/trac/ompi/ticket/4590, if the Fortran
compiler doesn't support PROCEDURE in the way we want/need, disable
the mpi_f08 module.

Refs trac:4590

This commit was SVN r31587.

The following Trac tickets were found above:
  Ticket 4590 --> https://svn.open-mpi.org/trac/ompi/ticket/4590
2014-05-01 18:17:52 +00:00
Ralph Castain
e20dae536c Last step under current RFC: OMPI_CHECK_WITHDIR -> OPAL_CHECK_WITHDIR
This commit was SVN r31585.
2014-05-01 15:38:07 +00:00
Ralph Castain
2749231eb5 Next step in RFC: OMPI_CHECK_COMPILER_WORKS -> OPAL_CHECK_COMPILER_WORKS
This commit was SVN r31584.
2014-05-01 15:25:47 +00:00
Ralph Castain
e11eb15518 Next step of RFC: OMPI_CHECK_FUNC_LIB -> OPAL_CHECK_FUNC_LIB
This commit was SVN r31583.
2014-05-01 14:57:43 +00:00
Ralph Castain
3b64c603b4 First stage of RFC to rename OMPI_foo build system support: change OMPI_CHECK_PACKAGE -> OPAL_CHECK_PACKAGE
This commit was SVN r31582.
2014-05-01 14:24:56 +00:00
Mike Dubman
0cba0b95b8 OSHMEM: fortran profiling API added
for spec compliance 

fixed by Roman, reviewed by Igor/Miked

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31510.
2014-04-23 18:56:37 +00:00
Jeff Squyres
69bb758bca ompi_config_pthreads.m4: fix to compile with Clang 3.4
Clang 3.4 static analysis is now smart enough that it refuses to
compile our POSIX threading tests because we simply passed 0 for
several arguments (the test is checking for the linker presence of
symbols, so the NULL arguments didn't matter).  Specifically, Clang's
anti-NULL compile-time checks now refuse to compile this bogus code.
Hence, these 2 configure test codes now have real variables and
pointers so that clang will compile it properly.

Without this fix, configure determines that there is no POSIX
threading support, and the osc/sm component fails to compile (which is
a different defect I'll be filing shortly).  As such, we need this fix
in 1.8.1.

Also, change from the deprecated AC_TRY_LINK to AC_LINK_IFELSE.

cmr=v1.8.1:reviewer=dgoodell

This commit was SVN r31458.
2014-04-19 13:13:06 +00:00
Nathan Hjelm
99812c8c07 Improve support for Cray's CLE 5
cmr=v1.8.1

This commit was SVN r31426.
2014-04-18 17:49:16 +00:00
Ralph Castain
0f02ba21df Remove --enable-sensors configuration option
This commit was SVN r31404.
2014-04-15 21:58:29 +00:00
Ryan Grant
6d577a2663 Update to atomics selection, fix octal issue and rename defines
This commit was SVN r31396.
2014-04-15 15:40:30 +00:00
Ryan Grant
e67ca81dca Fixing atomics selection issue, to be CMR'd after it passes the nightly tests
This commit was SVN r31393.
2014-04-15 13:17:04 +00:00
Jeff Squyres
d2d28710ba fortran: Remove the gfortran-4.9-disabling configry
The bug in #4157 has now been fixed, so remove the configure test that
disabled mpi_f08 functionality for gfortran 4.9.

Fixes trac:4157

cmr=v1.8.1:ticket=trac:4512

This commit was SVN r31373.

The following Trac tickets were found above:
  Ticket 4157 --> https://svn.open-mpi.org/trac/ompi/ticket/4157
  Ticket 4512 --> https://svn.open-mpi.org/trac/ompi/ticket/4512
2014-04-11 21:04:04 +00:00
Mike Dubman
b20de8ae34 OSHMEM: add support for profiling API
use weak symbols, based on http://www.open-mpi.org/community/lists/devel/2014/03/14429.php
fixed by Roman, reviewed by Igor/Miked

cmr=v1.8.1:reviewer=ompi-rm1.8

This commit was SVN r31330.
2014-04-07 22:55:21 +00:00
Jeff Squyres
50a705f247 Fix #4465: spall Quadrics correctly.
Many thanks to Jeff Hammond for noticing.

cmr=v1.8:reviewer=ompi-rm1.8

This commit was SVN r31256.
2014-03-27 17:52:43 +00:00
Ralph Castain
08fd24f452 Ensure we properly check for sockaddr_in before checking for tcp
This commit was SVN r31166.
2014-03-20 00:17:29 +00:00
Jeff Squyres
412364d66e Change "test ==" to "test =" to be more portable.
This commit was SVN r31159.
2014-03-19 21:38:01 +00:00
Ralph Castain
17d618abd2 As per the thread on ticket #4399, OSHMEM does not support non-Linux platforms. So provide a check for Linux and error out if --enable-oshmem is given on a non-supported platform. If no OSHMEM option is given (enable or disable), then don't attempt to build OSHMEM unless we are on a Linux platform. Default to building if we are on Linux for now, pending the outcome of the Debian situation.
cmr=v1.7.5:reviewer=jsquyres:subject=disable OSHMEM on non-Linux platforms

This commit was SVN r31155.
2014-03-19 20:32:15 +00:00
Ralph Castain
f259d50ed7 Fully fix the PMI2 warning - turned out to be larger than originally thought due to the way the function was being handled across multiple files. Properly resolve the problem by not compiling the file if PMI2 is not desired, and then appropriately setting the visibility of the function within the module
Refs trac:4400

This commit was SVN r31084.

The following Trac tickets were found above:
  Ticket 4400 --> https://svn.open-mpi.org/trac/ompi/ticket/4400
2014-03-17 17:36:37 +00:00
Jeff Squyres
616e62bb9e Fix --enable|disable-oshmem configure switch
* Fixed the AC_ARG_ENABLE for the oshmem option.
* Fixed the AM_CONDITIONALs values for the projects.
* Re-added (and slightly simplified) the use of PROJECT_OSHMEM in
  various Makefile.am's to disable building OSHMEM stuff

Submitted by Jeff, reviewed and approved by Ralph.

cmr=v1.7.5:reviewer=ompi-gk1.7

This commit was SVN r31062.
2014-03-13 21:23:04 +00:00
Ralph Castain
9c66c4f439 Correctly implement --disable-oshmem and --without-orte so we don't build the disabled section of code. Fix a bunch of code rot in the PMI rte component, and add several missing headers when building --without-orte.
NOTE: I transferred the oshmem-disabled-by-default from the 1.7 branch to the trunk to minimize future disruption if/when we change that option.

cmr=v1.8:reviewer=jsquyres

This commit was SVN r31006.
2014-03-11 22:02:40 +00:00
Mike Dubman
a14dda491e OSHMEM: various fixes
- -check-shmem-params is OFF by default. It checks OSHMEM API params and will abort on bad input
- hcoll do not save fallback coll pointers for unsupported collectives.

fixed by Val, Roman, reviewed by Miked/Igor

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30995.
2014-03-11 17:27:33 +00:00
Ralph Castain
96f67507a5 Improve/expand the database configure logic for future use
This commit was SVN r30984.
2014-03-11 03:01:15 +00:00
Mike Dubman
a1044dd517 OSHMEM: fix fortran selection logic
based on offline discussion and agreement with Jeff

fixed by Roman, reviewed by Igor/Mike
cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30952.
2014-03-06 11:22:30 +00:00
Nathan Hjelm
9e92c5be53 osc/sm: check for pthread_condattr_setpshared and pthread_mutexattr_setpshared. fall
back on barrier if either function doesn't exist.

cmr=v1.7.5:reviewer=jsquyres

This commit was SVN r30911.
2014-03-03 17:09:09 +00:00
Mike Dubman
33d363e65d OSHMEM: fix fortran binding
based on true story: http://www.open-mpi.org/community/lists/devel/2014/03/14262.php

fixed by Roman, reviewed by Igor/Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30906.
2014-03-03 09:58:11 +00:00
Vasily Filipov
f2014b96e7 OPENIB BTL/CONNECT: Add support for AF_IB addressing in rdmacm.
This commit was SVN r30875.
2014-02-27 11:29:47 +00:00
Dave Goodell
4875f48eaa usnic: enable UDP support
This commit decouples OMPI deployment from the version(s) of the lower
layers of the stack by probing for UDP support.

Verbs applications assume a 40-byte header (there is no current
mechanism for querying payload offset).  So to support a 42-byte UDP
header without causing existing applications like ibv_ud_pingpong or
older versions of OMPI to crash, we must inform libusnic_verbs that we
are aware of the nonstandard payload offset.  We do this by overriding
the `transport_type` field of the device to be 42 before calling
`ibv_open_device`.  If the library resets it to something else, then we
know the lower layers are UDP capable.  Otherwise we use the older
custom-L2 format.

This necessitated some minor ugliness in common_verbs, but it's as tidy
as Jeff and I know how to make it right now.

This commit only adds support for UDP headers and connectivity over the
same L2 network, it does not touch routing or interface pairing.

Reviewed-by: Jeff Squyres <jsquyres@cisco.com>

cmr=v1.7.5:ticket=trac:4253

This commit was SVN r30838.

The following Trac tickets were found above:
  Ticket 4253 --> https://svn.open-mpi.org/trac/ompi/ticket/4253
2014-02-26 07:44:35 +00:00
Jeff Squyres
d07d1864ae Revert r30804.
We're going to be bringing a bunch of usnic code to the SVN trunk
soon, and I basically brought this commit over out of order.  So I'm
reverting it for now; the same functionality will come back shortly.

This commit was SVN r30805.

The following SVN revision numbers were found above:
  r30804 --> open-mpi/ompi@5bedcc15bf
2014-02-24 19:12:49 +00:00
Jeff Squyres
5bedcc15bf Support the IBV_*_USNIC_* verbs constants.
These constants are now upstream (see
https://git.kernel.org/cgit/libs/infiniband/libibverbs.git/commit/?id=f57a9c67eabb9e7f19c624ac3c8c27b7be55796c),
so let's support them properly in Open MPI.

Added bonus: consolidating these checks up in
ompi_check_openfabrics.m4 allowed removing some custom checks and
AC_DEFINE's from the usnic configure.m4 script.

Also change the usnic/configure.m4 check for IBV_EVENT_GID_CHANGE to
use AC_CHECK_DECLS (vs. AC_CHECK_DECL).

cmr=v1.7.5:reviewer=dgoodell

This commit was SVN r30804.
2014-02-24 18:57:04 +00:00
Jeff Squyres
d35019ba19 Add file that was forgotten in r30776. Refs trac:4205.
This commit was SVN r30780.

The following SVN revision numbers were found above:
  r30776 --> open-mpi/ompi@bda840df49

The following Trac tickets were found above:
  Ticket 4205 --> https://svn.open-mpi.org/trac/ompi/ticket/4205
2014-02-20 11:32:57 +00:00
Jeff Squyres
bda840df49 Fixes trac:4205: ensure sizeof(MPI_Count) <= sizeof(size_t)
- Move the ptrdiff_t tests up higher in configure.ac to be with the
  rest of the type tests.
- Create new OMPI_FIND_MPI_AINT_COUNT_OFFSET for finding the
  corresponding types of MPI_Aint, MPI_Count, and MPI_Offset.
  Consolidate all the old C and Fortran tests into this new macro (and
  .m4 file).
- Fix Fortran MPI_*_KIND tests that incorrectly keyed off assumed
  types (e.g., int64_t) rather than whatever the corresponding C
  MPI_Aint, MPI_Count, MPI_Offset types turned out to be.
- Add new logic to ensure that sizeof(MPI_Count) <= sizeof(size_t),
  because our entire PML, BTL, and convertor infrastructure requires
  this.  As a side effect, just like MPI_Offset the same type of
  MPI_Count (because MPI_Count has to be able to hold an MPI_Offset,
  so we can't let MPI_Offset be larger than a MPI_Count).

This commit was SVN r30776.

The following Trac tickets were found above:
  Ticket 4205 --> https://svn.open-mpi.org/trac/ompi/ticket/4205
2014-02-19 23:04:34 +00:00
Ralph Castain
7576d5964a Remove c++ cruft from configure
Refs trac:4247

This commit was SVN r30655.

The following Trac tickets were found above:
  Ticket 4247 --> https://svn.open-mpi.org/trac/ompi/ticket/4247
2014-02-10 19:23:39 +00:00
Ralph Castain
8d04d7408e Sigh - remove the c++ cruft from here too
Refs trac:4247

This commit was SVN r30654.

The following Trac tickets were found above:
  Ticket 4247 --> https://svn.open-mpi.org/trac/ompi/ticket/4247
2014-02-10 17:32:02 +00:00
George Bosilca
32a494e73b When CXX support is disabled don't check if coverage is supported. The
problem is that ompi_cxx_vendor is only defined when MPI CXX support
is enabled.

This commit was SVN r30599.
2014-02-06 21:40:26 +00:00
Nathan Hjelm
4248cb1d9c Fix typo and portability issue in r30555
cmr=v1.7.4:ticket=trac:4223

This commit was SVN r30559.

The following SVN revision numbers were found above:
  r30555 --> open-mpi/ompi@5c35b5ba19

The following Trac tickets were found above:
  Ticket 4223 --> https://svn.open-mpi.org/trac/ompi/ticket/4223
2014-02-04 20:15:32 +00:00
Nathan Hjelm
5c35b5ba19 Fix wrapper ldflags.
cmr=v1.7.4:reviewer=jsquyres

This commit was SVN r30555.
2014-02-04 19:44:08 +00:00
Mike Dubman
3d8c06d1b4 fix min.supported version for mxm check
reviewed by Alex
cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30553.
2014-02-04 14:45:47 +00:00
Ralph Castain
fab35dbffa Silence some Solaris warnings reported by Paul Hargrove
cmr=v1.7.4:reviewer=jsquyres:subject=Silence some Solaris warnings

This commit was SVN r30542.
2014-02-03 19:46:08 +00:00
Mike Dubman
7e5031374e OSHMEM: Apply Jeff`s comments to fortran configure logic
Refs trac:3763

This commit was SVN r30530.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-02-03 09:47:56 +00:00
Jeff Squyres
87651a1e18 Ensure configure test compiler turds are removed.
This particular test can leave various <foo>.mod files in the OMPI top
build dir, which leads developers to say "what are these .mod files in
my 'svn status' output?".

So make a subdir, run the tests in there, and then remove the subdir.

Reviewed by Dave Goodell.

This is not 100% necessary for OMPI 1.7.4, but it would be nice.  The
goal is to have this test removed by OMPI 1.7.5 (i.e., fix ticket
4157).  So I leave it up to the RM to decide whether this goes into
1.7.4 or not.

cmr=v1.7.4:reviewer=ompi-rm1.7

This commit was SVN r30524.
2014-01-31 16:45:29 +00:00
Jeff Squyres
caaab7e8a3 Fix Fortran delcarations of MPI_SUBARRAYS_SUPPORTED and MPI_ASYNC_PROTECTES_NONBLOCKING
Ensure that these two flags are in all of mpif.h, the mpi module, and
the mpi_f08 module.  Thanks to Rolf Rabenseifner for pointing out the
issue.

cmr=v1.7.4:reviewer=ompi-rm1.7

This commit was SVN r30519.
2014-01-31 15:22:12 +00:00
Brian Barrett
8ab8940e45 Clean up error message about Sparc v8/v8+, since the README now has better
information and the cases are getting too long for an AC_MSG_WARN.

This commit was SVN r30503.
2014-01-30 17:51:13 +00:00
Ralph Castain
edc760434c My bad - do not include any references to "orcm" in configure.ac. However, do properly set the AM_CONDITIONALs based on projects being enabled/disabled
This commit was SVN r30501.
2014-01-30 16:44:57 +00:00
Ralph Castain
b84b8a2d52 Going to need these files to support change to configure.ac
This commit was SVN r30499.
2014-01-30 11:36:44 +00:00
Nathan Hjelm
700e97cf6a btl/vader: add support for SGI's implementation of xpmem and add support
for 32-bit architectures.

This commit also modifies _OMPI_CHECK_HEADER to use AC_CHECK_HEADERS instead
of AC_CHECK_HEADER. This allows components to check for multiple headers
instead of just one. The new semantics of the header check in OMPI_CHECK_PACKAGE
are to return success if at least one of the specified headers exists. The new
semantics will not break current usage.

cmr=v1.7.5:ticket=trac:4053

This commit was SVN r30476.

The following Trac tickets were found above:
  Ticket 4053 --> https://svn.open-mpi.org/trac/ompi/ticket/4053
2014-01-29 18:35:47 +00:00
Jeff Squyres
6adc16081a Add a configure test that mimics what OMPI's current mpi_f08
implementation does (that is not quite adherant to the Fortran
standard).  If a compiler allows this behavior, build the mpi_f08
wrapper.  For example, ifort allows it, but Pathscale/EKOPath 5.0 is
stricter in its Fortran compliance and disallows it.

This test is temporary; the real fix is to make OMPI adhere to Fortran
properly (i.e., see #4157).  Once we fix #4157, this test should be
removed.  The main reason for committing this test is to put it into
v1.7.4 so that we can release, but with the intent to remove it by
1.7.5 (or 1.8.x at the latest!).

Refs trac:4157

cmr=v1.7.4:reviewer=ompi-rm1.7:subject=Add mpi_f08-(non)compliance configure test

This commit was SVN r30440.

The following Trac tickets were found above:
  Ticket 4157 --> https://svn.open-mpi.org/trac/ompi/ticket/4157
2014-01-27 23:37:42 +00:00
Ralph Castain
af4a9a0688 Make clear that --with-pmi can/should be used to specify the path to the pmi installation since at least one person didn't realize it.
cmr=v1.7.4:reviewer=jsquyres

This commit was SVN r30439.
2014-01-27 22:50:37 +00:00
Jeff Squyres
967550b3ac Update the BIND(C, name="foo") test to see if the compiler supports
names longer than 32 characters.

Per discussion on the devel list starting here:
http://www.open-mpi.org/community/lists/devel/2014/01/13799.php we
need a new litmus test to disqualify older Fortran compilers (e.g.,
Pathscale 4.0.12) that *seem* to support all the Right Things, but a)
do not support BIND(C, name="super_long_name") or b) run into an
internal error when compiling our mpi_f08 module.

Testing for b) is sketchy at best.  But OMPI has some BIND(C) names
that are >32 characters, and the same compilers that exhibit b) also
seem to not support BIND(C) names that are >32 characters (i.e., a)).
Hence, the following BIND(C) test checks to ensure that BIND(C,
name="foo") works, where "foo" is actually a name >32 characters.

cmr=v1.7.4:reviewer=rhc:subject=Update Fortran configure test to exclude older pathscale/open64 compilers from mpi_f08

This commit was SVN r30421.
2014-01-24 23:17:14 +00:00
Ralph Castain
e3cb4b4a5b Grant Nathan his wish - add an --disable-getpwuid to the configure options and protect all users of that code so it disappears if disabled.
cmr=v1.7.5:reviewer=hjelmn:subject=disable getpwuid if requested

This commit was SVN r30413.
2014-01-24 19:18:37 +00:00
Mike Dubman
59d4bb662c OSHMEM: rework fortran support detection
fix the case, to enable oshmem-fortran when "with-shmem" was specified and "ompi-fortran" was enabled and happy.

fixed by Roman, reviewed by Miked

Refs trac:3763

This commit was SVN r30391.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-23 07:49:13 +00:00
Jeff Squyres
22782f6c2a Ensure to protect the "use mpi" build properly
cmr=v1.7.4:ticket=4162

This commit was SVN r30387.

The following Trac tickets were found above:
  Ticket 4162 --> https://svn.open-mpi.org/trac/ompi/ticket/4162
2014-01-23 03:40:38 +00:00
Jeff Squyres
308ab05ea7 Better detection for user-requested Fortran bindings.
As discovered by the nightly build, r30379 broke the case where
configure does not find a fortran compiler, and no form of
--enable-mpi-fortran was specified.

This commit specifically calls out the difference between a user
specifying that they want Fortran bindings and the default "try to
compile all the Fortran bindings" cases.

cmr=v1.7.4:ticket=4162

This commit was SVN r30386.

The following SVN revision numbers were found above:
  r30379 --> open-mpi/ompi@7b28af54bb

The following Trac tickets were found above:
  Ticket 4162 --> https://svn.open-mpi.org/trac/ompi/ticket/4162
2014-01-23 02:27:48 +00:00
Jeff Squyres
1c12e21296 We have no non-wrapper mpi_f08 implementation.
So just take out this useless warning.

cmr=v1.7.5:ticket=4163

This commit was SVN r30383.

The following Trac tickets were found above:
  Ticket 4163 --> https://svn.open-mpi.org/trac/ompi/ticket/4163
2014-01-23 01:34:34 +00:00
Jeff Squyres
7b28af54bb Add ability to selectively enable/disable Fortran bindings
Each Fortran bindings layer builds on the other.  Specifically:

 * You can build just mpif.h support
 * You can build mpif.h and "use mpi" support
 * You can build mpif.h and "use mpi" and "use mpi_f08" support

You cannot build mpif.h and "use mpi_f08" support without also
building "use mpi" support.

This new functionality adds new capabilities to the existing
--enable-fortran-mpi switch.  You can now pass the following values:

 * --enable-fortran-mpi=no or none: synonyms for --disable-fortran-mpi
   (i.e., build no Fortran bindings).
 * --enable-fortran-mpi=mpifh: build only mpif.h support
 * --enable-fortran-mpi=usempi: build mpif.h and "use mpi" support
 * --enable-fortran-mpi=usempif08: build mpif.h, "use mpi", and "use
   mpi_f08" support
 * --enable-fortran-mpi=yes or all: synonyms for --enable-fortran-mpi
   (i.e., no argument), which will attempt to build all 3 Fortran
   bindings

cmr=v1.7.4:ticket=4162

This commit was SVN r30379.

The following Trac tickets were found above:
  Ticket 4162 --> https://svn.open-mpi.org/trac/ompi/ticket/4162
2014-01-23 01:28:55 +00:00
Hadi Montakhabi
8af6b8b4e4 add support for PLFS filesystem
This commit was SVN r30370.
2014-01-22 21:16:15 +00:00
Mike Dubman
34b3718042 revert, need rework.
This commit was SVN r30351.
2014-01-21 17:56:01 +00:00
Mike Dubman
37343574e0 OSHMEM: fix fortran binding
The check to enable shmem fortran was too early, MPI can disable fortran but SHMEM fortran check was already done.
Refs trac:3763

This commit was SVN r30340.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-21 09:20:51 +00:00
Ralph Castain
abb432aef6 The portable_platform file moved to opal at some point, but this .m4 didn't get updated to match.
Thanks to Paul Hargrove for spotting it and providing a patch!

cmr=v1.7.4:reviewer=jsquyres

This commit was SVN r30320.
2014-01-18 03:19:34 +00:00
Ralph Castain
42b7c4499a Correct a typo to get the right configure option to match the internal logic, thus making --enable-mpi-thread-multiple to actually work
cmr=v1.7.4:reviewer=jladd:subject=fix enable-mpi-thread-multiple

This commit was SVN r30296.
2014-01-15 03:56:29 +00:00
Mike Dubman
9f5abfb233 OSHMEM: fix fortran selection logic and refactoring
refactoring inspired by this thread: http://www.open-mpi.org/community/lists/devel/2014/01/13744.php
fix oshmem fortran selection logic, Thanks to Paul for info
Refs trac:3763

This commit was SVN r30286.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-14 13:23:44 +00:00
Jeff Squyres
5f17bc3c2c Make the use of PROTECTED in the mpi_f08 module be optional.
Add a configure test to see if the Fortran compiler supports the
PROTECTED keyword.  If it does, use in mpi-f08-types.F90 (via a macro
defined in configure-fortran-output-bottom.h).

This is needed to support the PGI 9 Fortran compiler, which does not
support the PROTECTED keyword.

Note that regardless of whether we want to support the PGI 9 Fortran
compiler + mpi_f08, we need to correctly detect whether PROTECTED
works or not, and then use that determination as a criteria for
building the mpi_f08 module.  Previously, mpi-f08-types.F90 used
PROTECTED unconditionally, and we didn't test for it in configure.  So
if a compiler (e.g., PGI 9) supported everything else but didn't
support PROTECTED, it would try to compile the mpi_f08 stuff and choke
on the use of PROTECTED.

Refs trac:4093

This commit was SVN r30273.

The following Trac tickets were found above:
  Ticket 4093 --> https://svn.open-mpi.org/trac/ompi/ticket/4093
2014-01-13 18:35:42 +00:00
Jeff Squyres
c6c6cbddb2 Missed this one in r30271.
Refs trac:4102

This commit was SVN r30272.

The following SVN revision numbers were found above:
  r30271 --> open-mpi/ompi@23a235d1ef

The following Trac tickets were found above:
  Ticket 4102 --> https://svn.open-mpi.org/trac/ompi/ticket/4102
2014-01-13 18:30:15 +00:00
Jeff Squyres
23a235d1ef Minor configure output consistency updates
Just some minor updates to make some Fortran test outputs be a bit
more consistent with each other.  This can definitely wait until
1.7.5, unless it causes conflicts with other changes that need to come
into 1.7.4.

cmr=v1.7.5:reviewer=dgoodell

This commit was SVN r30271.
2014-01-13 18:28:26 +00:00
Jeff Squyres
cc4440147f Fix typos in Fortran configury: ensure to call the right m4 macros!
Refs trac:4093

This commit was SVN r30258.

The following Trac tickets were found above:
  Ticket 4093 --> https://svn.open-mpi.org/trac/ompi/ticket/4093
2014-01-11 14:34:53 +00:00
Jeff Squyres
69ecf1670c Remove even more dead Fortran configury.
This configure option was only relevant when we were generating TKR
"use mpi" interfaces for MPI subroutines with choice buffers.  Now
that we aren't, the only interface that needs to accept a choice
buffer is MPI_SIZEOF (which we have to provide).  

And since there's now only several dozen interfaces in the "mpi" TKR
module, there's no reason to not generate ''all'' possible array rank
values (when there were thousands of interfaces, generating 4-vs-7
array ranks per interface per type was a big deal).  The default used
to be 4; now we can just hard-code it to 7, the max possible value for
Fortran 2003 (I think the max was raised ?to 11? in F2008, but let's
not go there for now).

cmr=v1.7.5:reviewer=dgoodell:subject=Remove even more dead Fortran configury

This commit was SVN r30257.
2014-01-11 14:06:59 +00:00
Jeff Squyres
b0ffdb3ae5 As noted by Paul Hargrove, older PGI compilers support ''some'' of
BIND(C), but not ''all'' of it.  So expand our configure checks to
look for multiple different forms of BIND(C):

 * ISO_C_BINDING
 * SUBROUTINE ... BIND(C)
 * TYPE, BIND(C)
 * TYPE(foo), BIND(C, name="bar")

If the compiler supports all of these, then declare that we support
BIND(C), and the rest of the mpi_f08 checks can continue.  If we miss
any one of those, don't bother continuing -- we won't build the
mpi_f08 module.

Also push the results of all of these tests down to ompi_info so that
they can be reported easily (e.g., "Hey, why doesn't my OMPI
installation have the mpi_f08 module?").

cmr=v1.7.4:reviewer=jsquyres:subject=Expand Fortran BIND(C) configure checks

This commit was SVN r30247.
2014-01-10 23:44:55 +00:00
Jeff Squyres
18cc164a3b Remove dead Fortran .m4 code.
This should have been part of r30151/#4057.  Oops.

cmr=v1.7.4:reviewer=dgoodell

This commit was SVN r30246.

The following SVN revision numbers were found above:
  r30151 --> open-mpi/ompi@52b5e17d97
2014-01-10 23:40:47 +00:00
Mike Dubman
d9f144d09f fix broken logic for oshmem:bindings:fort
Refs trac:3763

This commit was SVN r30226.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-10 15:20:19 +00:00
Jeff Squyres
36cca10042 Thanks to a reminder from Tobias Burunus, commit support for the
upcoming GCC/gfortran 4.9's ignore TKR interface.

This was originally committed in a side mercurial repo, but I sadly
completely forgot about it until Tobias reminded me.

cmr=v1.7.5:reviewer=dgoodell:subject=Add support for gfortran 4.9 Fortran ignore TKR

This commit was SVN r30152.
2014-01-08 03:46:27 +00:00
Jeff Squyres
52b5e17d97 Eliminate some dead Fortran configury (these values are not used any
more).

cmr=v1.7.5:reviewer=dgoodell

This commit was SVN r30151.
2014-01-08 03:19:58 +00:00
Nathan Hjelm
e627c91227 btl/vader: add support for traditional shared memory.
This commit adds support for placing the send memory segment in a
traditional shared memory segment when XPMEM is not available. The
current default is to reserve 4MB for shared memory on each process.
The latest benchmarks show vader performing better than sm on both
Intel and AMD CPUs.

For large messages vader will now use CMA if it is available (and
XPMEM is not).

cmr=v1.7.5:reviewer=jsquyres

This commit was SVN r30123.
2014-01-06 19:51:44 +00:00
Ralph Castain
07503d8d6b Add some plumbing for ORCM support to keep the two code repos from diverging.
This commit was SVN r30115.
2014-01-03 22:35:20 +00:00
Ralph Castain
969d39d1af Fix enable-mpi-java - we can't push/pop the opal_java_happy variable in opal_setup_java.m4 as we need it in ompi_setup_java.m4 to determine that the java bindings can be built
cmr=v1.7.4:reviewer=jsquyres:subject=Fix enable-mpi-java

This commit was SVN r30097.
2013-12-28 17:03:59 +00:00
Jeff Squyres
6f6c3cc21c Per http://www.open-mpi.org/community/lists/devel/2013/12/13532.php,
r30016 was not enough to solve the issue.

So properly prefix all the shell variables used in opal_setup_java.m4
(one of them had an orte_ prefix -- oops!).  Now we won't get any
conflicts.

Refs trac:4015

This commit was SVN r30037.

The following SVN revision numbers were found above:
  r30016 --> open-mpi/ompi@35dfd26f9e

The following Trac tickets were found above:
  Ticket 4015 --> https://svn.open-mpi.org/trac/ompi/ticket/4015
2013-12-20 22:42:49 +00:00
Mike Dubman
92fdbbd7b1 Implementing comment #1 from http://www.open-mpi.org/community/lists/devel/2013/12/13523.php
Refs trac:4011

This commit was SVN r30024.

The following Trac tickets were found above:
  Ticket 4011 --> https://svn.open-mpi.org/trac/ompi/ticket/4011
2013-12-20 16:53:28 +00:00
Mike Dubman
d78a9cdd77 add rpath on mca_mtl_mxm.so to point to /path/to/mxm/lib/libmxm.so which was detected at configure time
This *should* fix following situation:

1 mxm.rpm puts /etc/ld.so.conf.d/mxm.conf file during rpm install with libpath to /opt/mellanox/mxm/lib
2 some1 can extract mxm.rpm into $HOME/mxm and compile OMPI with new mxm location
3 during runtime, OMPI from prev step will pick MXM from step (1) instead of from step (2)

cmr=v1.7.4:reviewer=ompi-rm1.7

This commit was SVN r30005.
2013-12-20 11:15:41 +00:00
Jeff Squyres
a7e65df6bc Update the --enable-wrapper-rpath help string to be correct.
Refs trac:3694

This commit was SVN r29903.

The following Trac tickets were found above:
  Ticket 3694 --> https://svn.open-mpi.org/trac/ompi/ticket/3694
2013-12-13 22:20:10 +00:00
Jeff Squyres
a25630c5e7 Fix rpath m4 typo that seeped in at the last minute.
Refs trac:3694

This commit was SVN r29901.

The following Trac tickets were found above:
  Ticket 3694 --> https://svn.open-mpi.org/trac/ompi/ticket/3694
2013-12-13 21:40:03 +00:00
Jeff Squyres
1bc8f41edb This commit combines 3 somewhat-unrelated things, which unfortunately
got linked together (work on one caused work in the other):

 * Clean up a bunch of VAR_SCOPE issues in configure.  This includes:
   * Using VAR_SCOPE_PUSH and VAR_SCOPE_POP in more places
   * Cleaning up the use of some shell variables (e.g., name them better)
 * Add support for external libevent via
   --with-libevent=<dir-to-libevent-install-tree>, as specifically
   asked for by downstream packagers.
 * Revamp how wrapper compiler RPATH (and RUNPATH) support is done.
   The external libevent work exposed weakenesses in how the original
   RPATH/RUNPATH work was done, so we had to re-do it to be a bit more
   robust.

This work has not yet been tested on Solaris.

Refs trac:3694

This commit was SVN r29899.

The following Trac tickets were found above:
  Ticket 3694 --> https://svn.open-mpi.org/trac/ompi/ticket/3694
2013-12-13 21:24:45 +00:00
Brian Barrett
121ca26c59 Per discussion at Develoepr's Meeting, remove Solaris threads support. Solaris
will just fall back to pthreads, which should be no problem.

This commit was SVN r29893.
2013-12-13 20:07:11 +00:00
Brian Barrett
6ef938de3f * Per the Developer's meeting today, restructure the threading in Open MPI a bit
more:
  - Remove OPAL_ENABLE_MULTI_THREADS, since it didn't really do anything
    correctly.  Opal always has threads enabled at this point.
  - Remove OMPI_ENABLE_PROGRESS_THREADS, since this hasn't worked in
    8 years and it has performance issues we'll never be able to
    overcome.  Note that we have plans for re-adding async progress, using
    a hybrid protocol of async and sync sends.
  - OMPI_ENABLE_THREAD_MULTIPLE now determines whether the thread lock
    macros do the check or not.
  - Condition variables are ALWAYS polling right now, which fixes the thread
    live-lock currently found when THREAD_MULTIPLE is turned on.

This commit was SVN r29891.
2013-12-13 19:40:12 +00:00
Jeff Squyres
cc7e121b1c Per thread starting here:
http://www.open-mpi.org/community/lists/users/2013/10/22882.php, fix
the value of MPI_STATUS_SIZE for the -i8 case.  Thanks to Jim Parker
for bringing up the issue and providing the patch.

Separate patches are required for v1.6 and v1.7 (and will be attached
to their respective tickets), because this breaks ABI, so we need a
non-default configure option to fix the issue but knowingly break ABI.

cmr=v1.7.4:reviewer=bosilca:subject=Fix MPI_STATUS_SIZE for -i8 case
cmr=v1.6.6:reviewer=bosilca:subject=Fix MPI_STATUS_SIZE for -i8 case

This commit was SVN r29858.
2013-12-11 17:47:54 +00:00
Jeff Squyres
e45412f5db Addendum to r29847: actually remove the old OPAL_VAR_SCOPE_POP
Refs trac:3694

This commit was SVN r29848.

The following SVN revision numbers were found above:
  r29847 --> open-mpi/ompi@c1ce04ad23

The following Trac tickets were found above:
  Ticket 3694 --> https://svn.open-mpi.org/trac/ompi/ticket/3694
2013-12-09 14:30:01 +00:00
Mike Dubman
c1ce04ad23 revert Jeff`s fix, now hcol can be compiled with it
Refs trac:3694

This commit was SVN r29847.

The following Trac tickets were found above:
  Ticket 3694 --> https://svn.open-mpi.org/trac/ompi/ticket/3694
2013-12-09 11:49:09 +00:00
Jeff Squyres
33fe77b874 Comment out the badness from the hcoll configury, originally from
r29830 -- Jeff will straighten this out with Alexander in person next
week (I can't test this myself because I have no access to libhcoll).
Sorry for the hassle...

Refs trac:3694

This commit was SVN r29842.

The following SVN revision numbers were found above:
  r29830 --> open-mpi/ompi@3bd9c603ff

The following Trac tickets were found above:
  Ticket 3694 --> https://svn.open-mpi.org/trac/ompi/ticket/3694
2013-12-08 14:36:55 +00:00
Mike Dubman
9a65e0d8c6 cosmetic fixed fpr hcol autotools
Refs: #3694

This commit was SVN r29841.
2013-12-08 09:45:13 +00:00
Jeff Squyres
a7f45f2675 Oops! r29830 added a variable into OPAL_VAR_SCOPE that is actually
needed in the global scope ($ompi_check_fca_dir).  This commit removes
it from the OPAL_VAR_SCOPE, so it should be fixed now.

Sorry about that, folks!  :-(

This commit was SVN r29838.

The following SVN revision numbers were found above:
  r29830 --> open-mpi/ompi@3bd9c603ff
2013-12-07 22:54:10 +00:00