ports/openmpi
ports/openmpi
1
1
Форкнуть 0
Код Релизы Активность
21 483 коммитов 3 Ветки 0 Теги 130 MiB
a40fe8311f
Граф коммитов

21483 Коммитов

This Branch
This Branch
Все ветки
Автор SHA1 Сообщение Дата
Nathan Hjelm
a40fe8311f opal_lifo: add missing memory barriers in 128-bit atomic functions 2014-12-09 19:50:08 -07:00
Nathan Hjelm
ccbb869274 Use AC_TRY_LINK not AC_TRY_COMPILE when testing for __sync_bool_compare_and_swap on 128-bit values 2014-12-09 18:56:21 -07:00
Nathan Hjelm
1231bb7479 Update lifo and fifo tests to use opal_init/finalize_util so they work during make distcheck 2014-12-09 17:41:18 -07:00
Ralph Castain
04c6d1d01d Silence warnings 2014-12-09 16:10:58 -08:00
Jeff Squyres
e6c8bfc201 libfabric: Gah -- also remove the "pragma pop" line 
Thanks to Nathan for pointing out that I missed snipping one line in
2f9c69f016 (I removed the trailing
comment, but not the trailing pragma -- oops!).
 2014-12-09 14:03:39 -08:00
Jeff Squyres
2f9c69f016 libfabric: use correct C99 notation for var-length array 
Nathan pointed out the correct C99 way to notate a variable-length
array in a struct.  This change has now been accepted upstream in
libfabric.
 2014-12-09 13:33:15 -08:00
Nathan Hjelm
d0da29351f opal_progress: fix sched_yield check 2014-12-09 14:14:20 -07:00
Jeff Squyres
cd0a54d76f usnic: short term fix to enable builds on non-libfabric platforms 
This isn't quite the Right fix yet, because it doesn't address usnic
for external libfabric builds.  I'll fix that separately / later.
 2014-12-09 09:19:26 -08:00
Nathan Hjelm
b2b7ecc7c4 Merge pull request #300 from hjelmn/topic/atomic_lifo_fifo 
Add opal_fifo_t class and rename opal_atomic_lifo_t to opal_lifo_t
 2014-12-09 10:54:50 -06:00
Jeff Squyres
c40fd09d2a libfabric: fix providers to conditionally add libs/flags 
Only allow the usnic and PSM providers to add CPPFLAGS and LIBADD
flags when they are going to be built.
 2014-12-09 07:15:25 -08:00
Jeff Squyres
45d6f29a27 Merge pull request #310 from yburette/master 
libfabric: add optional PSM provider.
 2014-12-09 06:39:34 -08:00
Jeff Squyres
6e24a1eb85 usnic: update for libfabric API change 
Use FI_ADDR_UNSPEC for posting a receive from an unspecified source.
 2014-12-09 06:06:52 -08:00
Jeff Squyres
f5a07f651c libfabric: Open MPI addition to stem a flood of warnings 
Add a pragma to not warn about zero-length arrays.  This needs to be
addressed upstream, but for now, do it here.
 2014-12-09 06:04:37 -08:00
Jeff Squyres
f331f48796 libfabric: update embedded libfabric to 934a714 
Update the embedded copy of libfabric to the github ofiwg/libfabric
repo hash 934a714ca85f1a30a1e384a7d5f714ee962dc253.
 2014-12-09 06:03:51 -08:00
Jeff Squyres
09d03a154b libfabric: fix some typos in the usnic configury 2014-12-09 05:52:24 -08:00
Ralph Castain
18d9fdfd8d Restore full topology comparison to support inventory monitoring 2014-12-09 01:33:06 -08:00
Ralph Castain
9b2f8cd840 Add the processor architecture to the topology signature 2014-12-09 01:17:00 -08:00
Ralph Castain
9d5135e6cd Function definition should use the correct type 2014-12-09 01:04:31 -08:00
Ralph Castain
06e49d0e92 Per contribution from Pascal Deveze of Bull: move opal_set_using_threads earlier in MPI_Init (before datatype init) so the value gets set in time to be properly used. 2014-12-09 00:37:57 -08:00
Howard Pritchard
3a14c8eeff fix build for cray xc 
Recent addition of libfabric embdded broke build on Cray XC/XE.
This commit fixes this problem.
 2014-12-08 22:21:13 -08:00
Yohann Burette
f90a7b51d2 libfabric: add optional PSM provider. 2014-12-08 16:49:41 -08:00
Ralph Castain
bb529ebd8e Revise the way we handle hetero nodes as users are finding this (a) a significant surprise, and (b) confusing as to when it is required. So try to automate it a bit by creating a topology "signature" that mpirun can share on the cmd line with the remote daemons, thus allowing them to check to see if they match. This isn't comprehensive of course - for now, it only checks the number of each type of hwloc object on the node. This is good enough to pickup major differences (e.g., where we have different numbers of sockets or assigned core bindings). 
Retain the hetero-nodes flag for those cases where the user *knows* that there are differences and our automated system isn't good enough to see it.

Will obviously require further refinement as we find out which variances it can detect, and which it cannot.
 2014-12-08 15:38:14 -08:00
Jeff Squyres
f1629b66da Merge pull request #309 from yburette/master 
libfabric: fix typo in Makefile.am
 2014-12-08 13:24:56 -08:00
Yohann Burette
f33a9afd22 libfabric: fix typo in Makefile.am 2014-12-08 13:19:43 -08:00
Jeff Squyres
ac8e9d103c libfabric: need to make AM_CONDITIONALs always be run 
Ensure that the usnic-specific AM_CONDITIONAL for the embedded
libfabric is always run.
 2014-12-08 11:51:26 -08:00
Jeff Squyres
d64881f040 psm_am.h: add missing file from libfabric snapshot 
This is just about to be fixed upstream, but "make dist" was not
including this file in the libfabric tarball.
 2014-12-08 11:39:08 -08:00
Jeff Squyres
d02756cdbb libfabric: various configury updates 
1. Ensure to override CFLAGS properly.  Move the setting of CFLAGS outside the AM_CONDITIONAL so that Automake doesn't get confused (because CFLAGS is already set inside an AM_CONDITIONAL -- moving it outside the conditional ensure that this local CFLAGS override trumps all other CFLAGS overrides).
2. Only build libfabric on Linux. Add a little more configury to ensure that we only try to build libfabric on Linux.
3. Remove a dead/unused file
4. Fix typo in condition check
5. Use "false", not "/bin/false"
 2014-12-08 11:39:07 -08:00
Jeff Squyres
92818d1fa5 usnic: remove SVN-style $Id$ tokens (and #idents) 
This commit is also upstream in libfabric.
 2014-12-08 11:39:07 -08:00
Jeff Squyres
9547345b18 usnic: fix show_help message 
Rename a few symbols to use libfabric-friendly names.  Fix a show_help
message when fi_av_insert times out.
 2014-12-08 11:39:07 -08:00
Jeff Squyres
8e49cc754f usnic: update to latest libfabric API changes 2014-12-08 11:37:37 -08:00
Jeff Squyres
c4e8d67515 libfabric: sync to upstream libfabric github 
Bring down the latest from the libfabric github, as of
9d051567c8eb7adc2af89516f94c7d0539152948.
 2014-12-08 11:37:37 -08:00
Jeff Squyres
7cd4832a0d .gitignore: ignore usnic unit test executable 2014-12-08 11:37:37 -08:00
Jeff Squyres
7a96b58882 common verbs: remove usnic-specific code 
Now that the usnic BTL uses libfabric, we can remove the
usnic-specific code from opal/mca/common/verbs.
 2014-12-08 11:37:37 -08:00
Jeff Squyres
984982790a usnic: convert from verbs to libfabric (yay!) 
This commit represents the conversion of the usnic BTL from verbs to
libfabric.

For the moment, libfabric is embedded in Open MPI (currently in the
usnic BTL).  This is because the libfabric API is still changing, and
also has not yet been released.  Ultimately, this embedded copy of
libfabric will likely disappear and the usnic BTL will rely on an
external installation of libfabric.

New configure options:

* --with-libfabric: will cause configure to fail if libfabric support
    cannot be built
* --without-libfabric: will prevent libfabric support from being built
* --with-libfabric=DIR: use an external libfabric installation
* --with-libfabric-libdir=LIBDIR: when paired with --with-libfabric=DIR,
    use LIBDIR for the libfabric installation library dir

The --with-libnl3[-libdir] arguments are now gone.
 2014-12-08 11:37:37 -08:00
elenash
baf32fe480 Merge pull request #308 from elenash/master 
restored _process_name_print_for_opal function in orte_init: it's requir...
 2014-12-08 19:14:36 +03:00
Ralph Castain
b757b3f452 Ensure that the #nodes in the job map gets properly updated when using the sequential mapper. Provide some further diagnostic info to help understand the problem when encountered. 2014-12-08 08:03:53 -08:00
Elena
6cf3925b09 restored _process_name_print_for_opal function in orte_init: it's required for opal output from daemons which never called ompi_init so didn't set opal_process_name_print pointer 2014-12-08 13:13:35 +02:00
Ralph Castain
d6d69e2b13 Get the direct routed component to work with both TCP and USOCK OOB components. We previously had setup the direct component so it would only support direct-launched applications. Thus, all routes went direct between processes. However, if the job had been launched by mpirun, this made no sense - what you wanted instead was to have each app proc talk directly to its daemon, but have the daemons all directly connect to each other. 
So we need all the routing code for dealing with cross-job communications, lifelines, etc. The HNP will be directly connected to all daemons as they must callback at startup, and so we need to track those children correctly so we know when it is okay to terminate.

We still have to support direct launch, though, as this is the only component we can use in that scenario. So if the app doesn't have daemon URI info, then it must fall back to directly connecting to everything.
 2014-12-07 09:11:48 -08:00
Ralph Castain
595740a8e3 Sigh - readd missing headers 2014-12-05 21:54:41 -08:00
Ralph Castain
4a0b4ad5ef You can't have a variable of the same name as the function... 2014-12-05 21:50:40 -08:00
Ralph Castain
aff1f0ee49 Add missing header files 2014-12-05 19:03:21 -08:00
Ralph Castain
b1bf557024 Fix the hostfile parser so it correctly ignores binding directives that are just integers. Fix the create_dmns function so we don't hang if we can't get an error before creating the job map for an application. 2014-12-05 15:47:09 -08:00
Howard Pritchard
328a408dd0 comment out alps select in cray_xe6 platform 
This alps selection stuff in the platform file is no longer required.
 2014-12-05 13:22:59 -07:00
Nathan Hjelm
23d59b0f5d Fix one typo in opal_path_nfs.c 2014-12-05 13:13:35 -07:00
Nathan Hjelm
0fc8777aa8 opal_path_nfs test: do not try to test filesystems that can not be stat'd 2014-12-05 13:11:45 -07:00
elenash
9cb3e7d181 Merge pull request #307 from elenash/master 
these changes fix direct routed component under mpirun; oob tcp and oob ...
 2014-12-05 18:53:54 +03:00
Nathan Hjelm
113b6bbdca opal_stdint.h: fix GCC diagnostic pragma 2014-12-05 07:19:14 -07:00
Jeff Squyres
9b18b4b2d2 opal_path_nfs: enable debugging output 
Now that "make check" siphons off stdout/stderr to logfiles, it's ok
to have output by default from tests.  This test fails often enough
that it's useful to see the diagnostic output.
 2014-12-05 03:19:51 -08:00
Elena
af38a762a2 these changes fix direct routed component under mpirun; oob tcp and oob ud are working with direct routed component, but usock doesn't work with direct routed component yet. 2014-12-05 12:38:59 +02:00
Gilles Gouaillardet
32bac600f7 opal: fix a warning caused by the introduction of opal_int128_t type 2014-12-05 12:14:31 +09:00