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Граф коммитов

25446 Коммитов

Автор SHA1 Сообщение Дата
Ralph Castain
c9ada8e095 Silence Coverity warnings 2016-07-03 20:45:08 -07:00
rhc54
0b915f1bb7 Merge pull request #1843 from rhc54/topic/listener
Update the PMIx listener to avoid leaking sockets into children, and …
2016-07-03 13:44:21 -07:00
Ralph Castain
673f82e2b6 Update the PMIx listener to avoid leaking sockets into children, and better handle race condition errors 2016-07-03 08:23:33 -07:00
Josh Hursey
59bf1f0c41 Merge pull request #1836 from jjhursey/topic/coll-nbc-0-count-ireduce
mpi/c: Add each check for count==0 in nonblocking reduce interface
2016-07-01 15:22:37 -05:00
Josh Hursey
9b4ed968a4 Merge pull request #1833 from jjhursey/topic/op-init-fix
op: Add a default value for MPI_OP o_name
2016-07-01 15:22:15 -05:00
Josh Hursey
8634a63625 Merge pull request #1834 from jjhursey/topic/coll-base-verbose
coll/base verbose, and neg priority cleanup
2016-07-01 15:21:00 -05:00
Joshua Hursey
0671e45de0 op: Add a default value for MPI_OP o_name 2016-07-01 13:46:01 -05:00
Joshua Hursey
96779f68e8 mpi/c: Add each check for count==0 in nonblocking reduce interface
* Matches the blocking versions of these interfaces
   - `iallreduce.c` to match `allreduce.c`
   - `ireduce.c` to match `reduce.c`
   - `ireduce_scatter.c` to match `reduce_scatter.c`
 * Workaround for IMB-NBC benchmark, similar to the workaround
   in place for the IMB-MPI1 benchmark for the blocking collectives.
2016-07-01 13:45:30 -05:00
Joshua Hursey
0a09f8bc51 coll/hcoll: Protect module destruct when not fully initialized
* If hcoll is given a negative priority, but not enabled=0 then
   the module is constructed, but then destructed before calling
   it's query(). So the previous pointers are not initialized.
   If we try to OBJ_RELEASE them in a debug build an assert will fire.
   This commit adds some protection against that and initializes
   the _module pointers to NULL.
2016-07-01 13:41:27 -05:00
Joshua Hursey
59f304b9e9 coll/base: neg. priority cleanup, verbose output improvements
* Print a verbose message if the component was disqualified because of
   a negative priority.
 * If a disqualified component provided a module, release it.
 * Display list of selected components in priority order
   - During the process of volunteering collective functions for a
     communicator, print the component name and priority. This will
     cause the verbose messages to be displayed in reverse priority
     order (lowest priority first, up to highest). This is helpful
     when determining which collective components are active in which
     order for a given communicator.
     To see the messages you need the following MCA parameter set to 9
     or higher: `-mca coll_base_verbose 9`
 * Adjust verbose for commonly needed verbose output from 10 to 9 to
   make it easier to access this information.
2016-07-01 13:41:27 -05:00
Nathan Hjelm
f38cc00df9 Merge pull request #1835 from hjelmn/thread_fix
ompi/request: fix hang in ompi_request_wait_completion
2016-06-30 18:50:32 -06:00
Nathan Hjelm
2cf0e5d7cc Merge pull request #1837 from hjelmn/rdmacm_fix
btl/openib: fix rdmacm locking bug
2016-06-30 16:55:18 -06:00
Nathan Hjelm
01d6da31af btl/openib: fix rdmacm locking bug
This commit fixes a long standing bug in rdmacm. It is required that
the thread that calls mca_btl_openib_endpoint_cpc_complete holds the
endpoint lock. This was not the case for rdmacm. This causes debug
builds to abort. This change also required changing
mca_btl_openib_endpoint_send_cts to require the endpoint lock to be
held when calling.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-30 15:50:07 -06:00
Nathan Hjelm
cc2b3e0c3f Merge pull request #1830 from hjelmn/rdmacm_test
Test for rdmacm hang fix
2016-06-30 10:41:46 -06:00
Nathan Hjelm
2640271c26 Merge pull request #1832 from hjelmn/r2_rdma
bml/r2: be more restrictive on rdma endpoints
2016-06-30 10:05:23 -06:00
Nathan Hjelm
445b79bba8 ompi/request: fix hang in ompi_request_wait_completion
This commit fixes a hang reported by @nysal which happens when a
request is completed after a sync object is created but before the
sync object can be assigned to the request. In this case we need to
set the sync signaling field to false to ensure WAIT_SYNC_RELEASE does
not hang.

Fixes open-mpi/ompi#1828

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-30 09:54:00 -06:00
rhc54
063f8489c7 Merge pull request #1801 from rhc54/topic/toolconnect
Add support for PMIx tool connections and queries.
2016-06-29 20:48:19 -07:00
Nathan Hjelm
960fcd292c btl/openib: fix rdma hang
This commit is an attempt to fix a hang in finalize of rdmacm. This fixes
a path where no rdmacm client is found for an endpoint.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-29 20:31:26 -06:00
Ralph Castain
6e434d6785 Add support for PMIx tool connections and queries. Initially only support a request to list all known namespaces (jobids) from ORTE, but other folks will extend that support to include additional information
Update to match PMIx RFC

Fix configury to point to correct libevent and hwloc locations
2016-06-29 19:19:19 -07:00
Nathan Hjelm
5f390b5f5a bml/r2: be more restrictive on rdma endpoints
This commit makes bml/r2 more restrictive on which endpoints end up in the rdma
endpoint list. Before this commit an endpoint was added if it supported either
put or get. This was done to ensure that endpoints are available for RMA.
Thought it is possible to support put or get endpoints we only currently
support endpoints that have put, get, and amos. bml/r2 now reflects this
support.

Signed-off-by: Nathan Hjelm <hjelmn@me.com>
2016-06-29 18:54:58 -06:00
Jeff Squyres
f18d6606da Merge pull request #1824 from hjelmn/rdmacm_fix
btl/openib: fix segmentation fault
2016-06-28 18:10:35 -04:00
Nathan Hjelm
8128c8eb29 btl/openib: fix segmentation fault
This commit fixes a segmentation fault that occurs if a device can be
initialized but not used. In this case the devices_count is not equal
to the number of usable devices in the devices pointer array.

Thanks to @artpol84 for tracking this down.

Fixes open-mpi/ompi#1823

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-28 10:31:32 -06:00
Nathan Hjelm
955269b4f1 Merge pull request #1816 from hjelmn/request_perfm_regression
opal/sync: fix race condition
2016-06-28 09:12:00 -06:00
Nathan Hjelm
a6b3b1f8d9 Merge pull request #9 from artpol84/fix_waitany
Request handling: fix MPI_Waitany and MPI_Waitsome
2016-06-28 08:09:53 -06:00
Artem Polyakov
541715572f Fix MPI_Waitany and MPI_Waitsome
(request handling related)
2016-06-28 16:40:00 +03:00
Joshua Ladd
5795682aa5 Merge pull request #1817 from shamisp/topic/oshmem_init
OSHMEM: Removing erroneous initialization check
2016-06-27 12:59:20 -04:00
Gilles Gouaillardet
5d32282230 orted/pmix_server_pub: fix packing type in pmix_server_lookup_fn()
and make it match the one used when unpacking in orte_data_server()
2016-06-27 14:37:08 +09:00
Artem Polyakov
8d011ea403 Fix Mellanox copyright. 2016-06-26 21:01:19 -06:00
Nathan Hjelm
fb455f0802 opal/sync: fix race condition
This commit fixes a race condition discovered by @artpol84. The race
happens when a signalling thread decrements the sync count to 0 then
goes to sleep. If the waiting thread runs and detects the count == 0
before going to sleep on the condition variable it will destroy the
condition variable while the signalling thread is potentially still
processing the completion. The fix is to add a non-atomic member to
the sync structure that indicates another process is handling
completion. Since the member will only be set to false by the
initiating thread and the completing thread the variable does not need
to be protected. When destoying a condition variable the waiting
thread needs to wait until the singalling thread is finished.

Thanks to @artpol84 for tracking this down.

Fixes #1813

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-26 20:14:01 -06:00
Nathan Hjelm
dac9201f3b Merge pull request #1770 from hjelmn/rdma_wth
btl/openib: fix rdmacm
2016-06-24 22:46:53 -06:00
rhc54
6cd5d5c0f9 Merge pull request #1818 from rhc54/topic/pub
Need to be a little more careful when checking the range on a publish…
2016-06-24 18:04:56 -07:00
Ralph Castain
e3e4d73986 Need to be a little more careful when checking the range on a publish/lookup operation. If the range was constrained at publish, then we need to check that the lookup fits within that constraint. Otherwise, we should provide the data. More detailed constraint checking will be provided later. 2016-06-24 17:01:49 -07:00
Pavel Shamis (Pasha)
1bb778857f OSHMEM: Removing erroneous initialization check
Since the introduction of the on-demand proc allocation
the check become erroneous and irrelevant.
Moreover, it completely breaks OpenSHMEM support in OMPI.

Signed-off-by: Pavel Shamis (Pasha) <pasharesearch@gmail.com>
2016-06-24 16:57:10 -05:00
Nathaniel Graham
0d85d688a5 Merge pull request #1812 from nrgraham23/java_coverity_fix
Fix Java Coverity issue
2016-06-23 08:08:12 -07:00
Ralph Castain
380cc8f040 Add a test program to help diagnose binding issues 2016-06-23 06:27:18 -07:00
Nathan Hjelm
2992d6d238 Merge pull request #1808 from abjoshi-brcm/timer_arm64
arm64: add timer support
2016-06-23 07:10:56 -06:00
Nathaniel Graham
bb9485bcd9 Fix Java Coverity issue
Fixing a possible error that Coverity pointed out in
ompi_java_exceptionCheck.

Signed-off-by: Nathaniel Graham <nrgraham23@gmail.com>
2016-06-23 15:09:07 +02:00
Abhishek Joshi
f06f7eb3e6 arm64: add timer support
Signed-off-by: Sreenidhi Bharathkar Ramesh <sreenidhi-bharathkar.ramesh@broadcom.com>
2016-06-23 11:01:00 +00:00
Ralph Castain
08b1438f15 Add missing PMIx range value so OPAL and PMIx align again 2016-06-22 22:03:25 -07:00
Nathan Hjelm
52c3af5211 Merge pull request #1811 from hjelmn/request_perfm_regression
opal/sync: fix warnings
2016-06-22 20:30:43 -06:00
Nathan Hjelm
55d1933a89 opal/sync: fix warnings
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-22 15:03:21 -06:00
Nathan Hjelm
4c4a8bb8ba Merge pull request #1810 from hjelmn/request_perfm_regression
Improve request/progress performance
2016-06-22 10:47:36 -06:00
Nathan Hjelm
e4f920f6f9 opal/progress: improve performance when there are no LP callbacks
This commit adds another check to the low-priority callback
conditional that short-circuits the atomic-add if there are no
low-priority callbacks. This should improve performance in the common
case.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-22 09:52:37 -06:00
Nathan Hjelm
143a93f379 opal/sync: remove usage of OPAL_ENABLE_MULTI_THREADS
The OPAL_ENABLE_MULTI_THREADS macro is always defined as 1. This was
causing us to always use the multi-thread path for synchronization
objects. The code has been updated to use the opal_using_threads()
function. When MPI_THREAD_MULTIPLE support is disabled at build time
(2.x only) this function is a macro evaluating to false so the
compiler will optimize out the MT-path in this case. The
OPAL_ATOMIC_ADD_32 macro has been removed and replaced by the existing
OPAL_THREAD_ADD32 macro.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-22 09:52:37 -06:00
Nathaniel Graham
679a66ccc8 Merge pull request #1803 from nrgraham23/jni_error_handling
Java bindings exception handling fix
2016-06-22 04:14:00 -07:00
Gilles Gouaillardet
bf133c401e pmix2x: fix a typo in dereg_event_hdlr()
This bug has been fixed when open-mpi/ompi@dde69e1be2 was backported into upstream pmix in pmix/master@5e5577778c
but it was not fixed in open-mpi/ompi
2016-06-22 13:45:29 +09:00
Jeff Squyres
af614afedf Merge pull request #1800 from thananon/common_sym_fix
Fixed common symbol error in btl/usnic.
2016-06-21 20:11:52 -04:00
Nathan Hjelm
7bd7c0578b Merge pull request #1807 from hjelmn/request_perfm_regression
ompi/request: fix performance regression
2016-06-21 14:47:56 -06:00
Nathan Hjelm
544adb9aed ompi/request: fix performance regression
This commit fixes a performance regression introduced by the request
rework. We were always using the multi-thread path because
OPAL_ENABLE_MULTI_THREADS is either not defined or always defined to 1
depending on the Open MPI version. To fix this I removed the
conditional and added a conditional on opal_using_threads(). This path
will be optimized out in 2.0.0 in a non-thread-multiple build as
opal_using_threads is #defined to false in that case.

Fixes open-mpi/ompi#1806

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-21 11:45:32 -06:00
Nathan Hjelm
8b7d81de13 Merge pull request #1805 from hjelmn/osc_rdma_fix
osc/rdma: fix typo
2016-06-21 09:55:08 -06:00