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8582 Коммитов

Автор SHA1 Сообщение Дата
Nathan Hjelm
97c9732bad osc/rdma: bug fixes
This commit fixes the following:

 - CIDs 1328491, 1328492: Dead code caused by typos in a prior
   commit.

 - Fix the calculation of dynamic memory regions. This was causes
   incorrect RMA range errors when accessing the last partial page of
   an attachment.

 - Fix a SEGV when using dynamic memory windows with local state (all
   processes on the same node).

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-10-22 09:49:38 -06:00
Howard Pritchard
ce8e241922 Merge pull request #1055 from nrgraham23/java_warnings_fix
Fix Java related warnings
2015-10-22 08:17:45 -06:00
Nathan Hjelm
b2fa2a9bef Merge pull request #1056 from hjelmn/osc_fixes
osc/pt2pt: reset all_sync sync object before sending complete messages
2015-10-21 19:40:28 -06:00
Nathan Hjelm
864f88a2a3 osc/pt2pt: reset all_sync sync object before sending complete messages
This commit fixes a bug that occurs when a post message comes in when
sending complete messages or while waiting for all outgoing messages
to flush. In that case the post message might get incorrecly
associated with the ending sync object.

References open-mpi/ompi#1012

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-10-21 18:30:08 -06:00
Nathaniel Graham
c4d70ab425 Fix Java related warnings
This commit fixes java related warnings.

Fixes #881

Signed-off-by: Nathaniel Graham <ngraham@lanl.gov>
2015-10-21 17:14:25 -07:00
Nathan Hjelm
386991d590 Merge pull request #1052 from hjelmn/osc_rdma_fixes
osc/rdma: use standard verbosity levels
2015-10-21 13:21:50 -06:00
Nathan Hjelm
9476c7bbca osc/rdma: use standard verbosity levels
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-10-21 12:31:41 -06:00
yohann
abe5002ee9 mtl/ofi: remove threading and progress hints. 2015-10-21 10:25:08 -07:00
yosefe
cc76db8d39 ucx: reduce components priority to 5. 2015-10-21 17:38:25 +03:00
Gilles Gouaillardet
a0782e1c7e mpi: MPI_Neighbor_all* and MPI_Ineighbor_all* do not work with
inter communicators (fail with MPI_ERR_COMM) or non process topologies
communicators (fail with MPI_ERR_TOPOLOGY)
2015-10-21 16:21:19 +09:00
Mike Dubman
4ea13f10f6 Merge pull request #1008 from alex-mikheev/topic/ucx_support
UCX support for ompi and oshmem
2015-10-21 09:33:33 +03:00
Gilles Gouaillardet
3b0b929883 ompi: MPI_IN_PLACE is not a valid argument of MPI_Neighbor_all* and MPI_Ineighbor_all* 2015-10-21 14:46:35 +09:00
Gilles Gouaillardet
256976a108 mpi: MPI_IN_PLACE is not a valid argument of MPI_All* and MPI_Iall* with an inter communicator 2015-10-21 14:46:28 +09:00
Gilles Gouaillardet
9b31530d5c man: misc fix of revamp of MPI_File_* and MPI_Register_datarep man pages
that fixes commit open-mpi/ompi@b17c89c1e6 :
- remove unnecessary empty lines
- add USE mpi in MPI_Register_datarep

Thanks Jeff for noticing this
2015-10-21 09:41:01 +09:00
Nathan Hjelm
763744a32c Merge pull request #1046 from hjelmn/osc_rdma_fixes
osc/rdma: bug fixes
2015-10-20 16:44:38 -06:00
Nathan Hjelm
b8ee05d352 osc/rdma: bug fixes
This commit fixes several bugs in the osc/rdma component:

 - Complete aggregated requests immediately. Completion of RMA
   requests indicates local completion anyway. This fixes a hang in
   the c_reqops test.

 - Correctly mark Rget_accumulate requests.

 - Set the local base flag correctly on the local peer.

 - Clear or set the no locks flag on the window if the value is
   changed by MPI_Win_set_info.

 - Actually update the target when using MPI_OP_REPLACE.

Fixes open-mpi/ompi#1010

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-10-20 15:27:15 -06:00
Ryan Grant
f60c506c68 Merge pull request #999 from tkordenbrock/topic/add.triggered.gather
coll-portals4: add gather and igather implementations that use Portals4 triggered operations
2015-10-20 14:59:09 -06:00
yosefe
a313588337 ompi: Add UCX PML. 2015-10-20 19:46:06 +03:00
yosefe
502dc8aaa4 add pml-specific field in OMPI datatype.
PML UCX will use it to cache a handle for UCX datatype.
2015-10-20 19:46:06 +03:00
Jeff Squyres
630d6bf800 Merge pull request #1038 from kawashima-fj/pr/man-correction
man: Various manpage corrections
2015-10-20 06:40:05 -04:00
KAWASHIMA Takahiro
7ab464fbb4 Revert "man: Remove unnecessary spaces in front of parameters."
This reverts commit 3253a30ab2.

Because Gilles' b17c89c1 committed a few hours ago has the same change,
my RP branch had a conflict.
2015-10-20 15:32:45 +09:00
KAWASHIMA Takahiro
373a94a3f1 man: Revert my MPI_File_iwrite_shared manpage change.
This reverts commit 2226cdb3da
and                 d9c93c9f5d.

Because Gilles' b17c89c1 committed a few hours ago has the same change,
my RP branch had a conflict.
2015-10-20 14:41:22 +09:00
Gilles Gouaillardet
2bd77ed4f9 mpi: fail with MPI_ERR_INTERN if MPI_IN_PLACE is used with MPI_I*alltoall*
currently, MPI fails with MPI_ERR_ARG. This is counter intuitive since
MPI_IN_PLACE is a legitimate parameter. MPI_IN_PLACE might not be correctly
implemented by all the non blocking modules (libnbc, ...) so fail with
MPI_ERR_INTERN for the time being.
2015-10-20 14:12:33 +09:00
Gilles Gouaillardet
b17c89c1e6 man: revamp MPI_File_* and MPI_Register_datarep man pages
- suggest USE mpi instead of INCLUDE 'mpif.h'
- fix indentation
Thanks Jeff for pointing this issue.
2015-10-20 13:12:12 +09:00
KAWASHIMA Takahiro
d9c93c9f5d man: Add const that is removed accidentally in 2226cdb. 2015-10-20 08:49:10 +09:00
Nathan Hjelm
9602484568 Merge pull request #1040 from hjelmn/mtl_priority
Change how cm's priority is calculated
2015-10-19 14:18:36 -06:00
Nathan Hjelm
53f6b57c0a pml/cm: use the priority of the mtl component
This commit changes the priority of mtl components to be relative to
pml/ob1 and updates the mtl interface to expose this priority. cm now
sets its own priority based on the priority of the selected mtl
component.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-10-19 12:32:42 -06:00
Nathan Hjelm
8b5810f7f7 mca/base: add priority output to mca_base_select
The mca_base_select function uses returned priorities to select the
best component/module. This priority may be of use to the caller so
pass that information back in an optional argument. If the priority is
not needed pass NULL.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-10-19 12:32:41 -06:00
Nathan Hjelm
bedd80214e pml/ob1: remove priority check
This commit removes code that checks the ob1 priority vs the previous
priority. The previous priority is meaningless here and may only cause
ob1 to disable itself when it shouldn't.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-10-19 12:32:41 -06:00
Nathan Hjelm
2fd176ac7f cm: fix selection priority
This patch removes a priority check that disables cm if the previous
pml had higher priority. The check was incorrect as coded and is
unnecessary as we finalize all but one pml anyway.

Fixes open-mpi/ompi#1035

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-10-19 12:32:26 -06:00
Gilles Gouaillardet
0f23037775 coll/base: fix memory allocation in mca_coll_base_alltoall_intra_basic_inplace 2015-10-19 16:47:59 +09:00
KAWASHIMA Takahiro
7fef70c9b8 man: Add MPI_DIST_GRAPH in MPI_TOPO_TEST manpage.
`MPI_DIST_GRAPH` was added in MPI-2.2.
2015-10-19 15:24:12 +09:00
KAWASHIMA Takahiro
d3a29e364c man: Change 'MPI ADDRESS KIND' to 'MPI_ADDRESS_KIND'.
(underscores instead of spaces)
2015-10-19 15:11:06 +09:00
KAWASHIMA Takahiro
dcd14103d5 man: Remove unnecessary spaces in Fortran syntax.
Similar lines of other routines have no space.
2015-10-19 15:04:50 +09:00
KAWASHIMA Takahiro
34c3b5d74d man: Correct the kind of ADDRESS parameter of MPI_GET_ADDRESS. 2015-10-19 15:01:30 +09:00
KAWASHIMA Takahiro
3253a30ab2 man: Remove unnecessary spaces in front of parameters. 2015-10-19 14:48:23 +09:00
KAWASHIMA Takahiro
2226cdb3da man: Correct the routine name of MPI_FILE_IWRITE_SHARED. 2015-10-19 14:44:49 +09:00
KAWASHIMA Takahiro
bffc7b6c8f man: Add man of MPI_Message_{c2f,f2c} and MPI_Op_commutative.
These routines were added in MPI-2.2 but were missing in OMPI man pages.
2015-10-19 13:49:40 +09:00
KAWASHIMA Takahiro
9942d5a933 man: MPI_IBARRIER has two output parameters. 2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
953c95e9bb man: Update description of MPI_IN_PLACE of MPI_Exscan.
MPI-2.2 added MPI_IN_PLACE support for MPI_Exscan.
2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
5a3b8b34cd man: Remove outdated description. MPI-2.2 is ratified. 2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
1261b115e4 man: Fix incorrect nroff markups. 2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
9b96209ac5 man: Fix incorrect C++ binding descriptions. 2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
ffce87328d man: MPI_Get_version now returns 3.1 instead of 2.1. 2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
80a0b30be8 man: Correct wrong argument order. 2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
4bbe86b171 man: Fix a typo of an argument. 2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
519ddd9ae9 man: Insert missing error classes & Fix incorrect error codes. 2015-10-19 13:46:02 +09:00
Nathan Hjelm
7dac5d36e5 bump fortran mpi version
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-10-16 11:04:17 -06:00
Nathan Hjelm
467ff3a450 Merge pull request #1024 from hjelmn/mpi_31
bump mpi version to 3.1
2015-10-16 09:35:52 -06:00
Edgar Gabriel
e9be9a1772 Merge pull request #1032 from edgargabriel/pr/macos-sharedfp-sm-fix
limit the number of bytes used for the semaphore name depending on pl…
2015-10-15 15:09:44 -05:00