Jeff Squyres
92c2ff91ec
Revert "Cleanup static build requirements by adding the wrapper flags back to the component configure.m4's. Minor cleanup of the lsf configure logic."
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This reverts commit open-mpi/ompi@32bf0e7b7e .
2014-12-03 13:15:20 -08:00
Todd Kordenbrock
c0c680bccb
Portals4 BTL: Do not disqualify if a peer does not put Portals4 BTL modex info
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If OPAL_MODEX_RECV() returns OPAL_ERR_NOT_FOUND, the peer didn't
send any Portals4 BTL info. This is not a fatal error. Instead of
disqualifying the Portals4 BTL just ignore that peer.
@jsquyres reported this in #194 .
2014-12-03 14:22:10 -06:00
Ralph Castain
54c955c92d
Fix a race condition that only appears to be affecting certain setups. The pmix.finalize function closes the file descriptor to the server, which then triggers the errhandler callback. Since the errmgr is about to be unloaded, it might be getting hit.
2014-12-03 12:19:00 -08:00
Ralph Castain
32bf0e7b7e
Cleanup static build requirements by adding the wrapper flags back to the component configure.m4's. Minor cleanup of the lsf configure logic.
2014-12-03 07:14:06 -08:00
Ralph Castain
0f94be1268
Revert "If someone specifically asks for knem support and we can't do it, then we really should abort."
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This reverts commit 6287d43c47
2014-12-03 07:10:54 -08:00
Alex Mikheev
428add390e
OSHMEM: spml ikrit: add skew to connect/disconnect
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Each pe connects/disconnects starting from itself instead of pe=0. This
will distribute network traffic in a more friendly way.
2014-12-03 15:36:45 +02:00
Ralph Castain
d9b23c1054
Increment the init_count in the Slurm pmix components so they correctly respond to calls to pmix.initialized
2014-12-02 20:20:29 -08:00
Ralph Castain
cb15cc06e1
Minor changes per Jeff's request on PR for 1.8.4
2014-12-02 19:54:10 -08:00
Artem Polyakov
fe1aaa12b4
Merge pull request #301 from artpol84/lt_dladvise
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Add "-I$srcdir/opal/libltdl/" so conftest will allways set lt_dladvise.
2014-12-03 07:45:22 +05:00
Artem Polyakov
859b9f951f
Add "-I$srcdir/opal/libltdl/" so conftest will allways set lt_dladvise.
2014-12-03 08:29:07 +06:00
Jeff Squyres
c6f222a5af
configury: add "./configure V=1" verbose mode
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Currently only shows whether opal_mca.m4 decides whether to build a
component or not. This will be helpful in debugging a remote user's
setup that somehow, mysteriously decides not to build a specific
component.
2014-12-02 17:50:44 -08:00
Ralph Castain
6294ed991b
Fix singletons - still working on singleton comm_spawn
2014-12-02 14:12:24 -08:00
Jeff Squyres
f99e56d17b
Merge pull request #298 from jsquyres/topic/lt_dladvise-fix
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Fix the lt_dladvise test noted by Edgar
2014-12-02 14:45:13 -05:00
Jeff Squyres
ed6c15be89
configury: whitespace and shell quoting cleanup
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Remove extra whitespace, change foo="$bar" to foo=$bar,
and change one instance of "$foo" = "1" to $foo -eq 1.
2014-12-02 10:43:23 -08:00
Jeff Squyres
f229dcd1bb
configury: fix lt_dladvise_init grep test
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Change the CPPFLAGS to just -I$srcdir, and change the include file to
check to be just opal/libltdl/ltdl.h. Do this because the CPPFLAGS
are passed to the preprocessor, and the C program that is passed
through the preprocessor is basically:
#include <opal/libltdl/ltdl.h>
Using the proper -I covers both VPATH and non-VPATH cases.
2014-12-02 10:42:57 -08:00
Nadezhda Kogteva
9406050f32
Merge pull request #296 from nkogteva/master
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Timing framework: pack timing scripts to tarball always
2014-12-02 14:04:22 +03:00
Nadezhda Kogteva
315a240899
Timing framework: pack timing scripts to tarball always
2014-12-02 12:22:46 +02:00
George Bosilca
e640673372
Refactor the datatype engine to reduce the critical path for the most
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trivial (and thus used) datatype usages. Make the gaps_contiguous
pack and unpack functions similar.
2014-12-02 16:23:41 +09:00
George Bosilca
8ee501350b
Implement strict validation for the packing/unpacking of the data.
2014-12-02 16:22:18 +09:00
Ralph Castain
14cdb04327
Revise the ess/pmi selection logic as all APPs must select it, and no daemons. Cleanup some of the mca param levels in ess so we don't printout the topology quite as easily.
2014-12-01 21:19:11 -08:00
Ralph Castain
53af0f1594
Temporarily turn off a specific datatype test that is preventing the nightly tarball from running
2014-12-01 19:52:37 -08:00
Jeff Squyres
56cfa90dda
lsf configury: add dependent libraries for static linking
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Ensure to add the LSF dependent libraries and LD flags for the wrapper
compiler static linking case.
2014-12-01 14:59:10 -08:00
Edgar Gabriel
7e41e0e62b
fix a segfault in the two-phase I/O algorithm for fileviews of 0 byte size.
2014-12-01 15:59:00 -06:00
Jeff Squyres
02311cdd40
.gitignore: add a missing test executable
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Also alphebetize the ignored files in test/class.
2014-12-01 10:56:45 -08:00
Ralph Castain
6287d43c47
If someone specifically asks for knem support and we can't do it, then we really should abort.
2014-12-01 09:47:47 -08:00
Ralph Castain
f92ccaf0f9
Add missing var declarations
2014-12-01 09:36:28 -08:00
Jeff Squyres
1cb986ec48
.gitignore: add more test executables to be ignored
2014-12-01 07:17:34 -08:00
yosefe
3f152733bf
Add yalla to the list of default PMLs
2014-12-01 13:11:28 +02:00
Alex Mikheev
8de50d8420
OSHMEM: spml ikrit: add call to mxm_mq_destroy()
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Make valgrind happy by calling mxm_mq_destroy() on module
close.
2014-12-01 12:36:46 +02:00
Gilles Gouaillardet
9d9d05b22d
configury: fix opal_config_pthreads when -lrt is set
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the test program was successful without -pthread if -lrt is used.
-pthread *is* required in order to correctly handle
the pthread_atfork function.
2014-12-01 19:02:31 +09:00
Ralph Castain
960ef34988
Ensure the LSF ras adds the hosts to the allocation. Correctly handle the semi-colon vs comma situation in hwloc slot_lists
2014-11-30 14:37:37 -08:00
Ralph Castain
3f9d9ae8b6
Provide tighter LSF integration by correctly handling scenarios where the user has asked LSF to assign bindings. Fix a couple of typos in lex parser definitions. Tell hostfile parser to ignore binding designations in hostfiles. Add an attribute to indicate that cpusets were provided as physical cpu ids.
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Once validated, a version of this will be backported to the v1.8.4 release.
2014-11-30 11:50:31 -08:00
Ralph Castain
f4aa94dddf
Keep trying changes to lsf configury
2014-11-30 11:50:30 -08:00
Edgar Gabriel
0758d7570e
part 1 of the fix to get rid of the missing symbols that prevent the sub-modules to be loaded.
2014-11-29 20:01:36 -06:00
George Bosilca
59b739ee90
Add a resized datatype to the test. Implement generic
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data corectness for most of the conversion functions.
2014-11-29 19:47:25 -05:00
George Bosilca
0b0c7ea28b
Fix a subtle bug in the convertor where the lb of the datatype
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can be added twice (for partially packed datatypes). Thanks to
the Fujitsu's MPI development team for the bug report and the
patch.
2014-11-29 19:46:02 -05:00
George Bosilca
dee243c58d
ompi_proc_finalize has an interesting side effect. A proc is
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inserted in the ompi_proc_list as soon as it is created and it
is removed only upon the call to the destructor. In ompi_proc_finalize
we loop over all procs in ompi_proc_finalize and release them once.
However, as a proc is not removed from this list right away, we
decrease the ref count for each proc until it reach zero and the
proc is finally removed. Thus, we cannot clean the BML/BTL after
the call the ompi_proc_finalize.
A quick fix is to delay the call to ompi_proc_finalize until all
other frameworks have been finalized, and then the behavior
depicted above will give the expected outcome.
2014-11-28 18:26:36 -05:00
Nadezhda Kogteva
71605d2763
Merge pull request #291 from nkogteva/master
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Adding of missed time measurement scripts in tarball
2014-11-28 13:56:17 +03:00
Nadezhda Kogteva
45ed55afd7
Adding of missed time measurement scripts in tarball
2014-11-28 12:15:30 +02:00
George Bosilca
6772b07792
Only use RDTSCP if supported by the processor.
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Conflicts:
opal/include/opal/sys/amd64/timer.h
2014-11-27 11:29:47 -05:00
George Bosilca
82920b77d3
Use RDTSC by now.
2014-11-26 16:59:57 -05:00
Elena
b17ea23ce0
fixes for direct routed component under mpirun
2014-11-26 13:36:49 +02:00
bosilca
8cae899a42
Merge pull request #285 from bosilca/master
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Reenable high accuracy timers
2014-11-25 17:09:34 -05:00
Ralph Castain
f48b9012cb
Some minor cleanup. We really don't need another peer error constant to indicate that a peer closed as we already have one for "connection failed", and that's all we really know. Update the orte constants to track their opal equivalents.
2014-11-25 08:02:29 -08:00
Gilles Gouaillardet
3299b07569
Merge pull request #287 from nkogteva/oob_ud
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OOB UD: fix case when multiple oob components specified in command line
2014-11-25 19:40:20 +09:00
Nadezhda Kogteva
8dd21c7736
OOB UD: fix case when multiple oob components were specified in command line (checking of uri).
2014-11-25 11:48:11 +02:00
Gilles Gouaillardet
578fe41788
fix hangs introduced by previous commit a6744b8177
2014-11-25 17:50:44 +09:00
Gilles Gouaillardet
a6744b8177
fix misc memory leaks specific to the master
2014-11-25 13:52:10 +09:00
George Bosilca
43901fa15a
Merge branch 'master' of github.com:open-mpi/ompi
2014-11-24 22:54:41 -05:00
Gilles Gouaillardet
38879cf682
fix misc memory leaks
2014-11-25 11:32:43 +09:00
