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2795 Коммитов

Автор SHA1 Сообщение Дата
Nathan Hjelm
b9dfe84b05 Fix segmentation fault in handling of boolean variables in mca_base_var_set_value.
cmr=v1.7.5:reviewer=jsquyres

This commit was SVN r31082.
2014-03-17 14:58:30 +00:00
Ralph Castain
ac421c931d The random number generator changes were incomplete (typo errors) in some places, and is missing the required declspec's for visibility.
cmr=v1.7.5:reviewer=jsquyres

This commit was SVN r31053.
2014-03-12 22:37:27 +00:00
Jeff Squyres
da87b506bd Remove warnings identified by clang 3.4
* Remove unused static functions
 * Remove unused static variables

cmr=v1.8:reviewer=hjelmn

This commit was SVN r31023.
2014-03-12 13:17:54 +00:00
Ralph Castain
9fca25a8dd Catch one more place where we need to use the actual topology instead of opal_hwloc_topology. Thanks to Tetsuya Mishima for the patch
Reviewed okay. RM-approved

cmr=v1.7.5:reviewer=ompi-gk1.7

This commit was SVN r31016.
2014-03-12 00:49:54 +00:00
Ralph Castain
96f67507a5 Improve/expand the database configure logic for future use
This commit was SVN r30984.
2014-03-11 03:01:15 +00:00
Ralph Castain
c6906e8b8c Use correct unpack function
This commit was SVN r30983.
2014-03-11 02:59:34 +00:00
Ralph Castain
081669b440 When pretty-printing binding info, we need to pass the topology down to the routine as the mapper isn't always working with the local topology - otherwise, we get an erroneous help message. Thanks to Tetsuya Mishima for reporting it
cmr=v1.7.5:reviewer=rhc:subject=fix pretty-print of bindings

This commit was SVN r30968.
2014-03-10 15:53:07 +00:00
Adrian Reber
4ca07ae125 re-introduce distill_checkpoint_ready
In the OPAL_ENABLE_FT_CR code path there used to be a variable
'mca_base_component_distill_checkpoint_ready' which got removed.
The FT code was not compiling and while trying to get it to compile
again the old variable was #ifdef'd out. This re-introduces the
variable with a new name 'opal_base_distill_checkpoint_ready'
and enables the code previously #ifdef'd out.

This removes the last hack introduced to get the FT code to compile
again.

This commit was SVN r30928.
2014-03-04 16:14:46 +00:00
Jeff Squyres
3f845edfdd * Prefix the preprocessor macro used to protect the file
* Include opal_stdint.h so that we have uin32_t

cmr=v1.7.5:ticket=trac:4298

This commit was SVN r30890.

The following Trac tickets were found above:
  Ticket 4298 --> https://svn.open-mpi.org/trac/ompi/ticket/4298
2014-02-28 16:56:38 +00:00
Ralph Castain
fea8a52983 Cleanup trailing spaces and use of tab instead of spaces
Refs trac:4298

This commit was SVN r30827.

The following Trac tickets were found above:
  Ticket 4298 --> https://svn.open-mpi.org/trac/ompi/ticket/4298
2014-02-25 23:41:55 +00:00
Joshua Ladd
9ea9bec4ad Addressing Jeff's comments:
1. Changed rng_buff_t --> opal_rng_buff_t
2. All global variables obey the prefix rule
3. Old code has been removed 
4. Found a couple of unnecessary includes

Refs trac:4298

This commit was SVN r30807.

The following Trac tickets were found above:
  Ticket 4298 --> https://svn.open-mpi.org/trac/ompi/ticket/4298
2014-02-24 23:18:35 +00:00
Joshua Ladd
e39d9f4080 Per the RFC schedule, add an additive lagged Fibonacci parallel random number generator to OPAL. In order to use, please add the following header to your code: opal/util/alfg.h. See ompi/mca/btl/openib/connect/btl_openib_connect_udcm.c for an example how to seed with opal_srand and invoke the generator with opal_rand. This should be added to
cmr=v1.7.5:reviewer=rhc:subject=Add an OPAL RNG

This commit was SVN r30801.
2014-02-23 21:41:38 +00:00
Adrian Reber
d7734ac6d8 CRS/CRIU: add code to actually checkpoint a process
This adds the code to actually checkpoint a process using CRIU
with the necessary variables to control the behaviour.

Right now only --np 1 is supported and --mca oob tcp.

Following parameters are supported:

* crs_criu_log: name of the log file
* crs_criu_log_level: verbosity level in the log file
* crs_criu_tcp_established: C/R established TCP connections
* crs_criu_shell_job: C/R shell jobs
* crs_criu_ext_unix_sk: allow external unix connections
* crs_criu_leave_running: leave tasks in running state after checkpoint

This commit was SVN r30772.
2014-02-19 13:30:12 +00:00
Ralph Castain
262c927778 Define a new key and store the process name of the local_rank=0 process on each node so that the MPI layer can retrieve it as desired.
This commit was SVN r30759.
2014-02-18 00:32:58 +00:00
Ralph Castain
d246d190ed Fix typo - thanks to Andreas Schwab for the patch
RM-approved

cmr:v1.7.5:reviewer=ompi-gk1.7

This commit was SVN r30751.
2014-02-17 19:36:16 +00:00
Jeff Squyres
0243353feb There's no reason for these files to be executable; remove the
svn:executable property.

This commit was SVN r30750.
2014-02-17 19:15:58 +00:00
Ralph Castain
c3df744a3b Shift the orte_db_localrank key to the opal level. Add the job and proc-level session directory names to the database using opal_db keys.
This commit was SVN r30746.
2014-02-17 01:40:56 +00:00
Adrian Reber
14ba81d166 Simplification to the CRIU configure.m4 script:
* Remove redundant/unnecessary uses of $2
 * Change a bunch of logic from negative to positive
 * Use OPAL_VAR_SCOPE_PUSH/POP to help reduce env var usage
 * Only use "" in test statements with strings that require sanitization
 * Removed redundant AC_MSG_WARN/ERROR.  There's now only one check at
   the bottom for whether the component is "good" or not.  We'll
   AC_MSG_WARN/ERROR in that one location.

Thanks to Jeff Squyres for this patch.

This commit was SVN r30739.
2014-02-15 21:22:30 +00:00
Ralph Castain
452f73de3d Update the keystone sec module - will use curl to connect to server
This commit was SVN r30704.
2014-02-12 22:06:44 +00:00
Ralph Castain
d0e8aeaee4 Add the time_t datatype to the DSS
This commit was SVN r30700.
2014-02-12 19:37:21 +00:00
Adrian Reber
56c23f22be CRS/SELF: fix compiler warning: variable 'callback_matched' set but not used
This commit was SVN r30667.
2014-02-11 14:45:29 +00:00
Adrian Reber
42d7b014e4 CRS/CRIU: added CRIU as new CRS component
To be able to checkpoint/restart using criu (criu.org) a new
CRS component is added which is based on criu. This first commit
provides the minimal set of functions and configure script options
to enable --with-criu and link against libcriu.so.
No actual checkpoint/restart functionality is yet implemented.
This is only the framework which needs to be filled with the
actual functionality.

This commit was SVN r30666.
2014-02-11 14:43:38 +00:00
Ralph Castain
86e8a147c6 Resolve uninitialized variables on some systems. Thanks to Paul Hargrove for finding the problem and suggesting the patch.
cmr=v1.7.5:reviewer=ompi-gk1.7

This commit was SVN r30656.
2014-02-10 21:17:34 +00:00
Ralph Castain
4e32a82638 If we are binding to hwthreads, then we need to treat hwthreads as cpus to get the mapping right
cmr=v1.7.5:reviewer=jsquyres:subject=set hwthreads to cpus when binding to them

This commit was SVN r30648.
2014-02-09 16:14:38 +00:00
Ralph Castain
ca0c806662 Resolve the problem of binding in inverted topologies - check the relative depth of the map and bind objects in the topology, and let that determine whether we bind downward or upwards.
cmr=v1.7.5:reviewer=jsquyres:subject=Resolve the problem of binding in inverted topologies

This commit was SVN r30643.
2014-02-09 05:30:17 +00:00
Ralph Castain
78e1846b4b Add further clarification regarding new "test" APIs
This commit was SVN r30567.
2014-02-05 15:48:31 +00:00
Jeff Squyres
9ba6c6fe41 Add missing header file
This commit was SVN r30556.
2014-02-04 19:50:02 +00:00
Ralph Castain
230336b6a8 Upgrade the security framework to avoid multiple hits against the global security server. Add support for future case where mpirun assings a global security credential for a given run, though we need to work out how to handle connect-accept from other mpirun's in that case. Remove a bunch of duplicate code in the OOB by consolidating the connection handshake code.
Refs trac:4221

This commit was SVN r30554.

The following Trac tickets were found above:
  Ticket 4221 --> https://svn.open-mpi.org/trac/ompi/ticket/4221
2014-02-04 14:47:04 +00:00
Ralph Castain
5980b7e042 Add a security framework for authenticating connections - we will add LDAP, Kerberos, and Keystone support in the next month. For now, just put a placeholder "basic" module that does the minimum.
Wire the security check into ORTE's OOB handshake, and add a "version" check to ensure that both ends are from the same ORTE version. If not, report the mismatch and refuse the connection

Fixes trac:4171

cmr=v1.7.5:reviewer=jsquyres:subject=Add a security framework for authenticating connections

This commit was SVN r30551.

The following Trac tickets were found above:
  Ticket 4171 --> https://svn.open-mpi.org/trac/ompi/ticket/4171
2014-02-04 01:38:45 +00:00
Ralph Castain
9514858067 As Rolf pointed out, this patch wasn't needed on the trunk - just the 1.7 branch. Sigh
This commit was SVN r30544.
2014-02-03 21:40:56 +00:00
Ralph Castain
4d533c81fb Minor cleanup required when configuring with an external libevent. Thanks to Orion Poplawski for the patch!
cmr=v1.7.4:reviewer=ompi-gk1.7

This commit was SVN r30543.
2014-02-03 21:03:05 +00:00
Ralph Castain
fab35dbffa Silence some Solaris warnings reported by Paul Hargrove
cmr=v1.7.4:reviewer=jsquyres:subject=Silence some Solaris warnings

This commit was SVN r30542.
2014-02-03 19:46:08 +00:00
Ralph Castain
193cceb483 Okay, since a certain other RM out there made a fuss about being able to lock their daemons to specified cores, offer the same option here. The MCA param orte_daemon_cores can be used to specify which core(s) you want the orte daemons to use. This will have no bearing on the application procs - unbound will remain unbound, and binding directives will be applied to the apps.
Yippee skippee...

This commit was SVN r30513.
2014-01-30 23:50:14 +00:00
Ralph Castain
ad7c84caee Cleanup some stale definitions in the new database components
This commit was SVN r30506.
2014-01-30 19:56:41 +00:00
Jeff Squyres
bc795cd25b Fix typo in comment.
This commit was SVN r30504.
2014-01-30 18:05:34 +00:00
Ralph Castain
83e32aadb7 Add a variant of opal_init/finalize for running unit tests
This commit was SVN r30497.
2014-01-30 11:14:36 +00:00
Ralph Castain
4a8888d377 Hey, having a unit test for opal_db proved useful. Found a few bugs and missing areas of support.
cmr=v1.7.5:reviewer=jsquyres:subject=fix bugs and missing support in opal_db

This commit was SVN r30493.
2014-01-30 00:51:18 +00:00
Rolf vandeVaart
791a3a5ec6 Fix CUDA-aware support with sendi optimization. Need to make sure copy function
is initialized.

This commit was SVN r30437.
2014-01-27 18:35:01 +00:00
George Bosilca
18ae20022a Don't forget to release the bitmaps.
This commit was SVN r30428.
2014-01-26 17:24:38 +00:00
Jeff Squyres
98d67add3c Updates to the README and wrapper compiler man pages for Fortran.
Thanks to Paul Hargrove for spotting these issues.

cmr=v1.7.4:reviewer=rhc:subject=Fortran README+man page updates

This commit was SVN r30414.
2014-01-24 21:00:00 +00:00
Ralph Castain
c6c10f47b8 Label rows with the table name when printing db logs
cmr=v1.7.5:reviewer=rhc

This commit was SVN r30410.
2014-01-24 17:30:12 +00:00
Ralph Castain
883c1a1c57 Fix ia64 operations by correcting a couple of bugs in the ia64 atomics. Thanks to Paul Hargrove for the patch!
Since Paul is the only one of the team with the required hardware to test it, and he has done so, consider this RM-approved.

cmr=v1.7.5:reviewer=ompi-gk1.7

This commit was SVN r30401.
2014-01-24 00:14:37 +00:00
Ralph Castain
a19510187b This is an old patch (r26226) from two years ago that somehow went directly into the 1.6 branch without first entering the trunk. Hence, the problem it fixed still remains in the trunk, and in the 1.7 series as a regression :-(
Thanks to Paul Hargrove for tracking it down.

RM-approved

cmr=v1.7.4:reviewer=ompi-gk1.7

This commit was SVN r30397.

The following SVN revision numbers were found above:
  r26226 --> open-mpi/ompi@12781482b9
2014-01-23 15:47:49 +00:00
Jeff Squyres
4204bd0b70 Fix harmless typo in error message.
Submitted by Paul Hargrove, reviewed by Jeff Squyres.

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30394.
2014-01-23 14:19:57 +00:00
Jeff Squyres
7768828d2d Addendum to r30298: tweak the wording of the help messages a bit.
Refs trac:4117.  Please use this commit rather than the patch attached to
the ticket; the patch had a few mistakes in the tweaked wording.

This commit was SVN r30362.

The following SVN revision numbers were found above:
  r30298 --> open-mpi/ompi@58479399c3

The following Trac tickets were found above:
  Ticket 4117 --> https://svn.open-mpi.org/trac/ompi/ticket/4117
2014-01-22 12:17:14 +00:00
Ralph Castain
9a2dc54311 Apply a patch provided by Paul Hargrove back in Jan 2013 that fixes MIPS assembly issues. This patch was originally reviewed and RM-approved to go into the 1.6 branch (which never happened for logistical reasons), and subsequently the trunk patch was provided. Paul has verified the patch and its application to 1.7.4, so we will consider it reviewed for that purpose.
cmr=v1.7.4:reviewer=ompi-rm1.7:subject=Fix MIPS assembly

This commit was SVN r30348.
2014-01-21 16:42:49 +00:00
Brian Barrett
fe093556f7 Only provide OPAL_THREAD_ADD64 if we have 64 bit atomics
This commit was SVN r30339.
2014-01-20 20:22:38 +00:00
Ralph Castain
26fbb4e77b Necessary constants for postgress module
This commit was SVN r30338.
2014-01-20 19:58:56 +00:00
Ralph Castain
12e4f8a71d Add support for postgres database
This commit was SVN r30337.
2014-01-20 19:56:26 +00:00
Ralph Castain
d2d4eeb2d6 Let the floating point pack/unpack work at arbitrary precision
cmr=v1.7.5:reviewer=rhc

This commit was SVN r30334.
2014-01-20 19:34:15 +00:00