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30386 Коммитов

Автор SHA1 Сообщение Дата
Thomas Jahns
8ecbe1ce97 Fix incorrect argument in manual page.
Signed-off-by: Thomas Jahns <jahns@dkrz.de>
2020-02-21 11:25:38 +01:00
Ralph Castain
3366f3ec40
Merge pull request #7436 from rhc54/topic/pstat
Remove the unused opal/pstat framework
2020-02-20 10:52:15 -08:00
Austen Lauria
dd5991f513
Merge pull request #7204 from devreal/shmwin_contig
Correctly set baseptr in contiguous shared memory window with local size zero
2020-02-20 13:22:40 -05:00
Ralph Castain
254dd2288a
Remove the unused opal/pstat framework
ORTE was the only one who used it, and ORTE is...gone!

Signed-off-by: Ralph Castain <rhc@pmix.org>
2020-02-20 09:23:40 -08:00
Ralph Castain
e8e089c681
Merge pull request #7435 from rhc54/topic/agn
Update PRRTE and PMIx pointers
2020-02-20 02:56:29 -08:00
Ralph Castain
b13c697d53
Update PRRTE and PMIx pointers
- remove stale s390 and MIPS atomics
- ensure envars from spawn are propagated
- fix make tarball
- ensure cleanup of default hostfile

Signed-off-by: Ralph Castain <rhc@pmix.org>
2020-02-19 22:51:19 -08:00
Ralph Castain
18ea9a13d8
Merge pull request #7431 from rhc54/topic/dep
Deprecate the --with-pmi option
2020-02-19 19:48:02 -08:00
Josh Hursey
c4e1b657ba
Merge pull request #7432 from jjhursey/automake-jobs
Add a -j option to autogen.pl to set AUTOMAKE_JOBS
2020-02-19 16:01:28 -08:00
Ralph Castain
7ebaee7437
Deprecate the --with-pmi option
Per the developer's meeting, add detection of the deprecated --with-pmi
(and its associated --with-pmi-libdir) configure option and error out
with a polite note of the change in support

Since "--with-pmi" now shows in the configure help output, mark the help
string with a giant *DEPRECATED* to warn users not to use it

Signed-off-by: Ralph Castain <rhc@pmix.org>

Ma

Signed-off-by: Ralph Castain <rhc@pmix.org>
2020-02-19 14:39:45 -08:00
Nathan Hjelm
c8ed75bba5
Merge pull request #7426 from hjelmn/opal_atomics_clean_out_sparcv9_as_it_is_not_supported
opal/asm: remove MIPS
2020-02-19 12:35:09 -08:00
Ralph Castain
58157f179d
Merge pull request #7430 from rhc54/topic/up
Update PRRTE and PMIx pointers
2020-02-19 12:16:32 -08:00
Joshua Hursey
f01df73853 Add a -j option to autogen.pl to set AUTOMAKE_JOBS
* `AUTOMAKE_JOBS` can improve the performance to `autogen.pl`
 * The user can set this envar in the environment before calling
   `autogen.pl` or use the new `-j #` option to set it.

Signed-off-by: Joshua Hursey <jhursey@us.ibm.com>
2020-02-19 14:01:47 -05:00
Ralph Castain
16f0adf7ec
Update PRRTE and PMIx pointers
- fix LSF compile issue
- protect against NULL user home directory
- update reachable component in PRRTE (still unused)

Signed-off-by: Ralph Castain <rhc@pmix.org>
2020-02-19 09:27:48 -08:00
Nathan Hjelm
b2f17241b3
Merge branch 'master' into opal_atomics_clean_out_sparcv9_as_it_is_not_supported 2020-02-19 08:16:46 -08:00
Geoff Paulsen
960c5f736f
Merge pull request #7425 from hjelmn/opal_atomics_clean_out_s390_as_it_is_not_supported
opal/atomic: clean out s390(x)
2020-02-19 07:27:29 -06:00
Nathan Hjelm
9eb5ef92da opal/asm: remove MIPS
This commit removes the code specific to MIPS. This architecture
has been unsupported for some time. Open MPI will continue to work
on MIPS with C11 and __atomic but will not longer use CMA for
shared memory.

Signed-off-by: Nathan Hjelm <hjelmn@google.com>
2020-02-18 21:35:40 -08:00
Nathan Hjelm
3d1495510c opal/atomic: clean out s390(x)
This commit removes the CMA support for s390 and s390x. These
architectures have been unsupported for awhile and no one has
verified that CMA actually works with Open MPI on these systems.

s390 and s390x will continue to work with Open MPI without CMA.

Signed-off-by: Nathan Hjelm <hjelmn@google.com>
2020-02-18 21:14:10 -08:00
Nathan Hjelm
a0567b51ba
Merge pull request #7421 from hjelmn/osc_rdma_fix_one_more_issue_with_nondebug_builds_because_assert_is_optd_out
osc/rdma: fix bug in attach for non-debug builds
2020-02-18 20:25:23 -08:00
Nathan Hjelm
8ee80d8855 osc/rdma: fix bug in attach for non-debug builds
This commit fixes an issue with non-debug builds where adding an
attachment to the attachment list doesn't actually happen. This
causes all MPI_Win_detach calls to fail. The call was within an
assert which is optimized out in optimized builds.

Signed-off-by: Nathan Hjelm <hjelmn@google.com>
2020-02-18 12:59:46 -08:00
Ralph Castain
0276679595
Merge pull request #7418 from rhc54/topic/up
Update PRRTE and PMIx pointers
2020-02-18 00:42:49 -08:00
Ralph Castain
82c71fae78
Update PRRTE and PMIx pointers
- Fix VPATH installs
- Protect against NULL home directories

Signed-off-by: Ralph Castain <rhc@pmix.org>
2020-02-17 21:45:22 -08:00
Nathan Hjelm
73469cb847
Merge pull request #7416 from hjelmn/lets_crash_on_debug_builds_if_the_user_home_directory_is_not_available
opal/mca: check if the user home directory is NULL
2020-02-17 17:50:07 -07:00
Nathan Hjelm
8197efa021 opal/mca: check if the user home directory is NULL
This commit fixes an issue in the MCA base variable system. The
code was retrieving the user home directory (from HOME) and
attempting to use it to build a search path for config files.
In this case user-level configuration directories have been
enabled so the appropriate thing to do is to print an error
message and return. This commit makes that change. It does not
ensure that HOME is set correctly.

Signed-off-by: Nathan Hjelm <hjelmn@google.com>
2020-02-17 14:51:46 -08:00
Nathan Hjelm
eeb3d7f845
Merge pull request #7387 from hjelmn/osc_rdma_allow_overlapping_registration_regions_and_return_the_correct_error_code_when_regions_overlap
osc/rdma: modify attach to check for region overlap
2020-02-17 14:26:53 -07:00
Jeff Squyres
3b7fd5ad0f
Merge pull request #7404 from jsquyres/pr/m4-holy-hell
opal_setup_cli.m4: do not escape $
2020-02-17 13:05:55 -08:00
Nathan Hjelm
54c8233f4f osc/rdma: bump the default max dynamic attachments to 64
This commit increaes the osc_rdma_max_attach variable from 32
to 64. The new default is kept low due to the small number
of registration resources on some systems (Cray Aries). A
larger max attachement value can be set by the user on other
systems.

Signed-off-by: Nathan Hjelm <hjelmn@google.com>
2020-02-16 17:09:20 -08:00
Nathan Hjelm
6649aef8bd osc/rdma: modify attach to check for region overlap
This commit addresses two issues in osc/rdma:

 1) It is erroneous to attach regions that overlap. This was being
    allowed but the standard does not allow overlapping attachments.

 2) Overlapping registration regions (4k alignment of attachments)
    appear to be allowed. Add attachment bases to the bookeeping
    structure so we can keep better track of what can be detached.

It is possible that the standard did not intend to allow #2. If that
is the case then #2 should fail in the same way as #1. There should
be no technical reason to disallow #2 at this time.

References #7384

Signed-off-by: Nathan Hjelm <hjelmn@google.com>
2020-02-16 17:09:06 -08:00
Ralph Castain
731b7e89e3
Merge pull request #7408 from rhc54/topic/myup
Update PRRTE and PMIx
2020-02-16 07:32:57 -08:00
Ralph Castain
274fba3126
Update PRRTE and PMIx
Correct platform file support
Fix configure cli capture to silence warning

Signed-off-by: Ralph Castain <rhc@pmix.org>
2020-02-15 19:38:34 -08:00
Ralph Castain
796886206b
Merge pull request #7406 from rhc54/topic/p2
Enable build against PMIx v2.2 without internal PRRTE
2020-02-15 18:58:25 -08:00
Ralph Castain
edaf9160ae
Enable build against PMIx v2.2 without internal PRRTE
If you autogen.pl --without-prrte, we wouldn't configure or build PRRTE
support. However, configuring with --disable-internal-rte wasn't working
as it was being ignored. This led to some false errors when compiling
with an earlier PMIx v2.2 release.

That said, there were a couple of places that needed protection against
PMIx v2.2.

Signed-off-by: Ralph Castain <rhc@pmix.org>
2020-02-15 16:28:16 -08:00
Jeff Squyres
04c50c668e opal_setup_cli.m4: do not escape $
We do not want to escape $, because the resulting quoted string ends
up in C code, and "\$" is not recognized by printf (and some compilers
warn about it).

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2020-02-15 11:50:16 -08:00
Ralph Castain
8eebeee9bf
Merge pull request #7403 from rhc54/topic/plt
Provide hooks for PRRTE and PMIx platform files
2020-02-15 10:59:19 -08:00
Ralph Castain
344346f27e
Provide hooks for PRRTE and PMIx platform files
Signed-off-by: Ralph Castain <rhc@pmix.org>
2020-02-15 08:40:56 -08:00
Ralph Castain
4bdb5a8103
Merge pull request #7402 from rhc54/topic/up3
Resolve the PMIx v3 incompatibility
2020-02-15 06:05:08 -08:00
Ralph Castain
133e8eba22
Resolve the PMIx v3 incompatibility
Fix a couple of spots in OMPI to resolve warnings. The one in comm_cid
in particular may be responsible for some/all of the comm_spawn issues
as it was passing an incorrect pointer to a macro, thus causing memory
corruption.

Update PRRTE and PMIx to deal with v3/v4 differences.

Signed-off-by: Ralph Castain <rhc@pmix.org>
2020-02-14 21:01:10 -08:00
Jeff Squyres
77df94d688
Merge pull request #7398 from yanagibashi/pr/fix-info-key-object
osc/sm: fix typo and minor correction
2020-02-14 18:29:05 -05:00
Tsubasa Yanagibashi
a07a83d189 osc/sm: fix typo and minor correction
- fix a typo `alloc_shared_contig` to `alloc_shared_noncontig`
- correct the value of `blocking_fence`

Signed-off-by: Tsubasa Yanagibashi <fj2505dt@aa.jp.fujitsu.com>
2020-02-14 17:52:56 +09:00
Ralph Castain
cb0bc201f3
Merge pull request #7397 from rhc54/topic/up
Update PRRTE
2020-02-13 19:16:09 -08:00
Ralph Castain
3aeccee026
Update PRRTE
- fix prefix handling
- fix ALPS compile issues

Signed-off-by: Ralph Castain <rhc@pmix.org>
2020-02-13 17:06:41 -08:00
Ralph Castain
79e54e940d
Merge pull request #7395 from rhc54/topic/fixfast
Fix potential hangs for fast-fail jobs
2020-02-13 12:19:23 -08:00
Ralph Castain
e0141f10e6
Fix potential hangs for fast-fail jobs
When a job fails very quickly, it is possible that the spawning tool
won't get notified that the spawn completed prior to be told that the
job terminated. This can cause the tool to "hang" in PMIx_Spawn. Ensure
that PRRTE handles this case by guaranteeing we notify the spawner.

Track both PRRTE and PMIx masters as both have changed, though only the
PRRTE one is involved in this particular fix.

Signed-off-by: Ralph Castain <rhc@pmix.org>
2020-02-13 10:59:18 -08:00
Ralph Castain
5cc5036fd7
Merge pull request #7386 from rhc54/topic/up
Update PRRTE
2020-02-12 13:26:44 -08:00
Ralph Castain
1a5647ddbe
Update PRRTE
- Ensure we accurately handle node name aliases
- Apply the local launch environ to apps prior to spawn
- Add error check if PMIx_Spawn fails
- Fix compiler warning
- Fix PGI vendor check
- Prevent mpirun from hanging if prte segfaults
- Fix absolute/relative path names to ensure "prte" and
  "prted" are taken from same distribution as "mpirun"

Signed-off-by: Ralph Castain <rhc@pmix.org>
2020-02-12 12:05:41 -08:00
Josh Hursey
ad83a1609d
Merge pull request #7385 from awlauria/pgcc18_support
Fix pgcc18 support.
2020-02-12 09:04:07 -06:00
Austen Lauria
14785deb3c Fix pgcc18 support.
- pgcc18 defines __GNUC__ similar to Intel compilers. So we must
  check for pgi higher up, or else configury will mistake
  it for gcc.

Signed-off-by: Austen Lauria <awlauria@us.ibm.com>
2020-02-11 15:55:42 -05:00
Nathan Hjelm
5025628651
Merge pull request #7383 from hjelmn/fix_bug_7303_the_rcache_deadlock_v3
rcache/grdma: fix potential deadlock
2020-02-11 08:36:02 -08:00
Nathan Hjelm
14b6f4931f rcache/grdma: fix potential deadlock
This commit fixes a potential deadlock that can occur between the
memory hooks and region registation. This deadlock occurs because
of a hold and wait error between two mutexes. The first mutex is
the VMA lock used to protect internal rcache/grdma structures and
the reader/writer lock in the interval tree.

In the case of the memory hooks a reader lock is obtained on the
interval tree then the VMA lock is obtained to remove the
registration from the LRU. In the case of LRU evictions the VMA
lock is obtained then the writer lock on the interval tree is
obtained. This leads to the deadlock.

To fix the issue the code that evicts from the LRU has been
updated to only invalidate the registration while the VMA lock
is held then remove the registration from the VMA after the
lock is released. This should completely eliminate the above
deadlock.

Signed-off-by: Nathan Hjelm <hjelmn@google.com>
2020-02-10 17:15:36 -07:00
Ralph Castain
c6831c59c8
Merge pull request #7379 from rhc54/topic/up
Add "stop-on-exec" support and update hwloc integration
2020-02-10 13:36:55 -08:00
Ralph Castain
42fe66ff0b
Add "stop-on-exec" support and update hwloc integration
Update PRRTE submodule pointer to track changes in master that impact
OMPI behavior plus provide a new capability

Signed-off-by: Ralph Castain <rhc@pmix.org>
2020-02-10 11:36:18 -08:00