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Граф коммитов

18150 Коммитов

Автор SHA1 Сообщение Дата
Ralph Castain
b7f0e46319 Provide a nicer error message when someone gives a bad signal number to opal_signal
cmr:v1.7.1

This commit was SVN r28188.
2013-03-20 15:30:59 +00:00
Matthias Jurenz
cf926da7e1 Changes to VT:
- configure: VPATH building: Moved adding of -I$top_srcdir to CPPFLAGS to the end of configure to prevent using this flags for configure checks
	- VT libs: Fixed potential segmentation fault (infinite recursion) when writing intermediate statistics (VT_STAT_INTV != 0)
	- vtunify: Fixed header include to disable OpenMP in the library version of vtunify (libvt-mpi-unify)
	- fixed several Coverity warnings

This commit was SVN r28187.
2013-03-20 15:22:21 +00:00
Ralph Castain
147c6ff9e7 Clean out the cruft leftover from the use_common_ports experiment
cmr:v1.7

This commit was SVN r28184.
2013-03-20 15:07:43 +00:00
Samuel Gutierrez
8ce2041102 Cleanup in error path. Fixes CID 967211. Thanks, Jeff.
This commit was SVN r28183.
2013-03-19 20:00:08 +00:00
Jeff Squyres
e5838e6121 Don't mandate PCI support, because this will make builds on platforms
that don't have libpciaccess fail (e.g., OS X, or any machine without
libpciaccess).

This commit was SVN r28181.
2013-03-19 16:20:08 +00:00
Jeff Squyres
2513122d31 Remove extraneous semicolon.
This commit was SVN r28180.
2013-03-18 23:58:11 +00:00
Jeff Squyres
7f34dc266b Add missing unlocks. Fixes CID 967022 (which covers the unlock on
line 627; there's probably another CID for the unlock added on line
537).

This commit was SVN r28179.
2013-03-18 23:19:25 +00:00
Jeff Squyres
90802410a8 Update hwloc from 1.5.1 to 1.5.2. Re-enable hwloc PCI support by
default, since it will now use libpciaccess (if available).

This commit was SVN r28178.
2013-03-18 23:02:56 +00:00
Jeff Squyres
7ac02fb9d4 Two fixes for the ROMIO io module:
* Don't call PMPI_* anything from our module code; that's terribly
   bad form (and disallowed!).  Instead, do the proper back-end stuff
   to reset the error handler on the file handle.
 * If we've already started to MPI_Finalize, then just give up and
   don't actually perform all the file closing actions (because
   ROMIO's file close calls MPI_Barrier, which will obviously fail if
   MPI_Finalize has already been invoked).  Bad user behavior should
   be punished (by leaking resources, not closing the file properly,
   etc.).

This commit was SVN r28177.
2013-03-18 20:11:20 +00:00
Jeff Squyres
f8bbfacf65 Fix CID 967922: minor memory leak possibility.
This commit was SVN r28175.
2013-03-15 17:59:00 +00:00
Jeff Squyres
447280b585 Fix Coverity CID 971095: minor memory leak
This commit was SVN r28170.
2013-03-15 15:04:35 +00:00
Brian Barrett
8cbe7ddb94 remove references to long dead btls
This commit was SVN r28167.
2013-03-13 00:13:22 +00:00
Brian Barrett
fc2b3b8d46 Ugh. Work around an issue with memory hooks and the change from one big
library to multiple libraries that are implicitly sucked into the executable
as a dependency of libmpi.  The initialize hook isn't visible to libc on some
linux distributions when it's in libopal and libopal isn't explicity linked
into the executable.  The fix is to have a duplicate initialize hook in
libmpi as well as libopal.  *sigh*.

This commit was SVN r28164.
2013-03-11 19:22:24 +00:00
Vasily Filipov
7bda23dd84 SBGP, BCOL: add missing "show_help.h" includes.
This commit was SVN r28163.
2013-03-10 09:11:09 +00:00
Matthias Jurenz
8094a57dc7 Changes to OTF:
- general:
		- incremented version number to 1.12.3
		- updated copyright information (2012->2013)
		- fixed compiler warnings occurred when NDEBUG is defined (--with-platform=optimized)
	- otfprofile, LaTeX output:
		- swapped x & y axis of the Message Data Rate Matrix
		- adapted labels to Vampir

Changes to VT:
	- general:
		- incremented version number to 5.14.3
		- updated copyright information (2012->2013)
		- fixed compiler warnings occurred when NDEBUG is defined (--with-platform=optimized)
	- configure / build system:
		- do not search for the MPI lib. when an MPI compiler wrapper was found (prevents double linkage of the MPI lib. when building vtunify-mpi and vtfilter-mpi)
		- prepend cross-prefix to the compiler wrappers *only* if '--with-cross-prefix[=PREFIX]' is given
		- removed unnecessary sources from libvt-java
	- VT libs:
		- extended inoffical API for manual region tracing: allow specifying a group name
		- plugin counters: Merge a set of post-mortem counters and write them under a single async key. This speeds up the unification.
		- Java tracing:
			- removed multiple asking for the current thread id when recording method enter/leave events
			- replaced hash function (id % prime) by Jenking's recommended one ( id & (hash_table_size-1) )
	- vtdyn: Do not instrument regions where inserting instrumentation would requires using a trap
	- vtsetup: Fixed availability state of the exec tracing feature

This commit was SVN r28162.
2013-03-08 13:50:26 +00:00
Brian Barrett
65109de931 Fix leak of comm and datatype references for mprobe/improbe and fix a request leak in improbe
This commit was SVN r28157.
2013-03-07 21:55:22 +00:00
Jeff Squyres
d9fed36793 This destruction logic was flat-out wrong. Harmless, but wrong.
Replace it with something much smaller and simpler.

This commit was SVN r28154.
2013-03-07 20:37:33 +00:00
Brian Barrett
db858827df Fill in more of the process info structure when using PMI
This commit was SVN r28152.
2013-03-06 19:32:47 +00:00
Brian Barrett
1aa9e74767 s/openib/verbs/
This commit was SVN r28151.
2013-03-06 19:00:54 +00:00
Brian Barrett
a67d768ee4 quick hack to get things compiling again. Still need to fill in the fixme parts. sigh.
This commit was SVN r28150.
2013-03-06 18:33:25 +00:00
Nathan Hjelm
809db8f6a9 Check for .git directory when checking for developer build
This commit was SVN r28149.
2013-03-06 17:47:27 +00:00
Ralph Castain
5b09cccacc Revise the build-ignore script for git:
1. remove the "die if not dual repo" and automatic "git add" for the .gitignore as we might want to run this script outside of a dual repo.

2. put the results in a single .gitignore file at the top so it mimics the mercurial script and is easier to copy to a git repo

3. don't prefix the entries with "./" as git doesn't recognize the entry if you do

This commit was SVN r28148.
2013-03-06 14:53:51 +00:00
Nathan Hjelm
3c5cd95087 mtl/psm: add missing header for opal_show_help (one more)
This commit was SVN r28147.
2013-03-05 00:18:51 +00:00
Nathan Hjelm
25d0d97d6b mtl/psm: add missing header for opal_show_help
This commit was SVN r28146.
2013-03-05 00:17:48 +00:00
Nathan Hjelm
213cb79fab mtl/psm: add missing header for opal_show_help
This commit was SVN r28145.
2013-03-05 00:15:11 +00:00
Brian Barrett
04ac6c4d6f fix typo
This commit was SVN r28144.
2013-03-01 22:21:48 +00:00
Brian Barrett
be361cf91b First take at kitten config file
This commit was SVN r28143.
2013-03-01 22:21:22 +00:00
Rolf vandeVaart
037729dcbb Add a search path. Refactor code.
This commit was SVN r28142.
2013-03-01 21:50:56 +00:00
Rolf vandeVaart
5c761d701d Remove tabs for spaces, fix some error messages.
This commit was SVN r28141.
2013-03-01 19:13:06 +00:00
Rolf vandeVaart
ebe63118ac Remove dependency on libcuda.so when building in CUDA-aware support. Dynamically load it if needed.
This commit was SVN r28140.
2013-03-01 13:21:52 +00:00
George Bosilca
6a933e7593 Use the libs not some weird path.
This commit was SVN r28139.
2013-02-28 22:34:47 +00:00
Ralph Castain
40e0b7be36 Update platform file
This commit was SVN r28138.
2013-02-28 20:18:42 +00:00
Ralph Castain
a4b6fb241f Remove all remaining vestiges of the Windows integration
This commit was SVN r28137.
2013-02-28 17:31:47 +00:00
Ralph Castain
e71b40fdcb If we are redirecting to files, ensure we don't create duplicate file descriptors for output streams going to the same file. If we do, then the output gets completely jumbled - best to avoid that problem.
This commit was SVN r28136.
2013-02-28 17:21:53 +00:00
Ralph Castain
63727aa714 Use a non-blocking send in show_help as it could be called from inside an event
This commit was SVN r28135.
2013-02-28 17:19:18 +00:00
Ralph Castain
cf9796accd Remove the old configure option for disabling full rte support - we now use the OMPI rte framework for such purposes
This commit was SVN r28134.
2013-02-28 01:35:55 +00:00
Nathan Hjelm
b5a2cd1cce remove csum pml
This commit was SVN r28133.
2013-02-28 00:17:56 +00:00
Brian Barrett
1370d4569a workaround for case when MD can't span all of memory (sigh)
This commit was SVN r28132.
2013-02-27 17:02:45 +00:00
Jeff Squyres
a951fde1ec Run a final "svn up" at the end of a successful gkcommit so that we
get a stable svnversion number (thereby allowing the next merge).

This commit was SVN r28128.
2013-02-27 15:04:51 +00:00
Vasily Filipov
f897c8a1e0 MTL MXM: STREAM supporting for isend and irecv.
This commit was SVN r28122.
2013-02-27 13:21:30 +00:00
Jeff Squyres
c29dcd02f1 Sync trunk NEWS with NEWS from v1.7 branch
This commit was SVN r28121.
2013-02-27 10:58:59 +00:00
Ralph Castain
347df93cd4 Handle the case of someone specifying a directory for the application. Ensure we get a non-zero exit status and clarify the error message.
cmr:v1.7

This commit was SVN r28119.
2013-02-27 01:36:21 +00:00
Ralph Castain
f36312ee6f Continue cleanup - this time, start working on the "without full support" flags in ORTE. Remove no-longer-needed configure.m4 files from the ess and errmgr. In the former case, since all priorities are now the same (given the removal of the cnos component), configure priorities are no longer required.
This commit was SVN r28118.
2013-02-26 21:27:48 +00:00
Ralph Castain
74a3ece313 Remove unused component
This commit was SVN r28117.
2013-02-26 20:58:43 +00:00
Ralph Castain
8d2fa3693b First cut at removing the native Windows support. Remove all the Windows-specific components, and the .windows files sprinkled around. Remove the Windows platform files and MTT scripts. Update the NEWS to point Windows users to the cygwin package.
This commit was SVN r28116.
2013-02-26 20:44:56 +00:00
Ralph Castain
9479635e31 Missing include here too...
This commit was SVN r28115.
2013-02-26 20:21:10 +00:00
Ralph Castain
8b8333da3e Add missing include
This commit was SVN r28114.
2013-02-26 19:56:05 +00:00
Ralph Castain
e413596705 Add the loopexit API to the opal_event definitions
This commit was SVN r28113.
2013-02-26 19:27:26 +00:00
Ralph Castain
bd9265c560 Per the meeting on moving the BTLs to OPAL, move the ORTE database "db" framework to OPAL so the relocated BTLs can access it. Because the data is indexed by process, this requires that we define a new "opal_identifier_t" that corresponds to the orte_process_name_t struct. In order to support multiple run-times, this is defined in opal/mca/db/db_types.h as a uint64_t without identifying the meaning of any part of that data.
A few changes were required to support this move:

1. the PMI component used to identify rte-related data (e.g., host name, bind level) and package them as a unit to reduce the number of PMI keys. This code was moved up to the ORTE layer as the OPAL layer has no understanding of these concepts. In addition, the component locally stored data based on process jobid/vpid - this could no longer be supported (see below for the solution).

2. the hash component was updated to use the new opal_identifier_t instead of orte_process_name_t as its index for storing data in the hash tables. Previously, we did a hash on the vpid and stored the data in a 32-bit hash table. In the revised system, we don't see a separate "vpid" field - we only have a 64-bit opaque value. The orte_process_name_t hash turned out to do nothing useful, so we now store the data in a 64-bit hash table. Preliminary tests didn't show any identifiable change in behavior or performance, but we'll have to see if a move back to the 32-bit table is required at some later time.

3. the db framework was a "select one" system. However, since the PMI component could no longer use its internal storage system, the framework has now been changed to a "select many" mode of operation. This allows the hash component to handle all internal storage, while the PMI component only handles pushing/pulling things from the PMI system. This was something we had planned for some time - when fetching data, we first check internal storage to see if we already have it, and then automatically go to the global system to look for it if we don't. Accordingly, the framework was provided with a custom query function used during "select" that lets you seperately specify the "store" and "fetch" ordering.

4. the ORTE grpcomm and ess/pmi components, and the nidmap code,  were updated to work with the new db framework and to specify internal/global storage options.

No changes were made to the MPI layer, except for modifying the ORTE component of the OMPI/rte framework to support the new db framework.

This commit was SVN r28112.
2013-02-26 17:50:04 +00:00
Jeff Squyres
7136dbb5b3 Fixes trac:3523. Discussed on the OMPI weekely teleconf today: add a
configure test to ensure that the Fortran compiler supports BIND(C)
with LOGICAL parameters (per
http://lists.mpi-forum.org/mpi-comments/2013/02/0076.php).

This may become moot shortly -- Pathscale tells me that they intend
upgrade their compiler to support BIND(C) with default LOGICAL in the
very near term (this week?).  But we still want this configure test so
that Open MPI won't even try to build the F08 bindings with older
versions of the Pathscale compilers (or any compiler that doesn't
support BIND(C) and LOGICAL parameters).

This commit was SVN r28110.

The following Trac tickets were found above:
  Ticket 3523 --> https://svn.open-mpi.org/trac/ompi/ticket/3523
2013-02-26 17:11:11 +00:00