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Граф коммитов

2501 Коммитов

Автор SHA1 Сообщение Дата
Karen Norteman
40eeeaef39 trac bug 850
This commit was SVN r13447.
2007-02-01 21:25:35 +00:00
Karen Norteman
e304eec9dc trac bug 850
This commit was SVN r13446.
2007-02-01 21:24:37 +00:00
Karen Norteman
8a627e8957 trac bug 850
This commit was SVN r13445.
2007-02-01 21:23:54 +00:00
Karen Norteman
25b153848d trac bug 850
This commit was SVN r13444.
2007-02-01 21:23:13 +00:00
Karen Norteman
0c30c74b0a trac bug 850
This commit was SVN r13443.
2007-02-01 21:22:34 +00:00
Karen Norteman
7a60f878a9 trac bug 850
This commit was SVN r13442.
2007-02-01 21:21:43 +00:00
Karen Norteman
11b91057ec trac bug 850
This commit was SVN r13441.
2007-02-01 21:21:00 +00:00
Karen Norteman
180ff99233 trac bug 850
This commit was SVN r13440.
2007-02-01 21:20:14 +00:00
Karen Norteman
a8b066798a trac bug 850
This commit was SVN r13439.
2007-02-01 21:19:08 +00:00
Karen Norteman
e13398b68d trac bug 850
This commit was SVN r13438.
2007-02-01 21:16:43 +00:00
Karen Norteman
cea22389bb trac bug 850
This commit was SVN r13437.
2007-02-01 21:15:43 +00:00
Jeff Squyres
321af727c0 Add external support for MPI_2COMPLEX and MPI_2DOUBLE_COMPLEX. The
machinery was already there; we were just missing the INTEGER's for
them in mpi.f and the #define's for them in mpi.h.

This commit was SVN r13432.
2007-02-01 19:37:38 +00:00
George Bosilca
1c7c39b32b I miss this warnings on my last commit.
This commit was SVN r13431.
2007-02-01 19:34:21 +00:00
Ralph Castain
3daf8b341b Fix the sched_yield problem for generic environments. We now determine and set sched_yield during mpi_init based on the following logical sequence:
1. if the user has specified sched_yield, we simply do what we are told

2. if they didn't specify anything, try to get the number of processors on this node. Note that we already now get the number of local procs in our job that are sharing this node - that now comes in through the proc callback and is stored in the ompi_proc_t structures.

3. if we can get the number of processors, compare that to the number of local procs from my job that are sharing my node. If the number of local procs exceeds the number of processors, then set sched_yield to true. If not, then be a hog and set sched_yield to false

4. if we can't get the number of processors, default to conservative behavior and set sched_yield to true.

Note that I have not yet dealt with the need to dynamically adjust this setting as more processes are added via comm_spawn. So far, we are *only* looking within our own job. Given that we have now moved this logic to mpi_init (and away from the orteds), it isn't yet clear to me how a process will be informed about the number of procs in *other* jobs that are also sharing this node.

Something to continue to ponder.

This commit was SVN r13430.
2007-02-01 19:31:44 +00:00
George Bosilca
79ea6d471b Even less warnings.
This commit was SVN r13429.
2007-02-01 19:27:11 +00:00
George Bosilca
56ffbfc5ff Get rid of the warnings in the Open IB BTL.
This commit was SVN r13424.
2007-02-01 19:07:04 +00:00
George Bosilca
f3a5fe488e No more warnings from the datatype engine.
This commit was SVN r13423.
2007-02-01 18:57:48 +00:00
Brian Barrett
49bcec64e4 More sm startup time reduction
* The real fix, don't leave the OOB in blocking mode during comm_dyn_init(),
    as it means no progressing MPI events while the event library is waiting
    for TCP stuff to come in.
  * Add many comments explaining the reasons for the current ordering

This commit was SVN r13422.
2007-02-01 18:47:43 +00:00
George Bosilca
9e3962b85d Working around the warnings. Unfortunately, this patch will be split
in several commits.

This commit was SVN r13420.
2007-02-01 17:58:18 +00:00
George Bosilca
b611e6d7dc Less warnings.
This commit was SVN r13419.
2007-02-01 17:51:43 +00:00
George Bosilca
6ef3917741 Allow the user to specify the bandwidth and latency for the MX device.
This commit was SVN r13418.
2007-02-01 17:51:00 +00:00
Brian Barrett
58b325b03f Two changes to improve the sm situation with spawn:
* have the mpool size be based on MCW, not num procs
    in other jobs we know about.  Solves the problem of
    the spawned job having a much bigger than needed
    sm file
  * Can't assume that "me" is in the list of procs
    passed to addprocs, so need to use slightly different
    logic and not go through all of add procs unless
    there's a proc in my job that isn't me.

This seems to greatly improve the situation, although
there still seems to be more of a slowdown through
MPI_INIT for the children (if there are more than one
child) than MPI_INIT for the parent if there are 'n'
children compared to 'n' parents.  Hopefully that
made sense ;)

This commit was SVN r13417.
2007-02-01 17:18:35 +00:00
Pak Lui
01c45b9637 * should fix the uninitialized function pointers. This is the patch to the
patch in r13391

This commit was SVN r13411.

The following SVN revision numbers were found above:
  r13391 --> open-mpi/ompi@289fbd08de
2007-02-01 05:07:53 +00:00
Brian Barrett
a0b40ce45a Fix race condition in setting MPI_ERROR -- with buffered sends, the
request can complete before the operation, meaning that a bogus MPI_ERROR
is read

This commit was SVN r13401.
2007-01-31 21:40:14 +00:00
Brian Barrett
039a3d8c17 add comment about why there's no status update here, since I always forget
This commit was SVN r13400.
2007-01-31 21:39:20 +00:00
Brian Barrett
846eed84f1 When receiving a message, need to account for the fact that the displacement
of the first entry might not be the start of the user's buffer.  This is
similar to what ompi_convertor_unpack does.  This is the solution for
the test case attached to ticket #690.

Refs trac:690

This commit was SVN r13397.

The following Trac tickets were found above:
  Ticket 690 --> https://svn.open-mpi.org/trac/ompi/ticket/690
2007-01-31 18:18:19 +00:00
Brian Barrett
65b07140c0 clean up some of the printf warnings caused by the attribute code
This commit was SVN r13395.
2007-01-31 17:11:06 +00:00
Pak Lui
289fbd08de * Fix the MPI::Datatype::Create_keyval() & MPI::Win::Create_keyval()
not being able to take C function pointers for either of the 
	copy or the delete fn. Fix by overloading the Create_keyval methods. 
    Fix trac #737, #738. Reviewed by jsquyres.
  *	A couple of cxx tests in ompi-tests (winkeyval.cc & typekeyval.cc) 
	will be re-enabled to regression test for this fix.

This commit was SVN r13391.
2007-01-31 15:00:41 +00:00
George Bosilca
a02d1c7c8d No more warnings.
This commit was SVN r13382.
2007-01-31 04:27:41 +00:00
George Bosilca
8cb4024903 Assert in debug mode before segfault.
This commit was SVN r13380.
2007-01-31 04:08:13 +00:00
Brian Barrett
ee753694e0 Print out the memlock limit when we can't allocate memory
This commit was SVN r13372.
2007-01-30 21:22:56 +00:00
Rainer Keller
061ba05439 - Fixes uncovered with the format attribute to
opal_output and opal_output_verbose

This commit was SVN r13371.
2007-01-30 20:56:31 +00:00
Rainer Keller
01ba38661d - First usage of the some of the attributes
This commit was SVN r13370.
2007-01-30 20:54:06 +00:00
Jeff Squyres
86f8c66a27 Turns out that the leave_pinned stuff isn't used in these BTLs at
all.  So just remove it.

This commit was SVN r13360.
2007-01-30 15:39:49 +00:00
Rainer Keller
3669e8921e - Fix further compiler warnings regarding initialization
and shadowing variables.

This commit was SVN r13358.
2007-01-30 06:34:38 +00:00
Jeff Squyres
e90b3e415b * Before this commit, if we called ompi_mpi_abort() before MPI_INIT
completed successfully, Bad Things(tm) could happen.
 * Now we explicitly check orte_initialized (a new global in ORTE
   indicating whether we are between orte_init() and orte_finalize()
   or not), and if so, react accordingly.
 * If ORTE is initialized, use orte_system_info.nodename; otherwise,
   use gethostname().
 * Add loop protection to ensure that ompi_mpi_abort() is not invoked
   multiple times recursively.

This commit was SVN r13354.
2007-01-29 22:01:28 +00:00
Jeff Squyres
a45e8bea05 Fixes trac:830. Put in argument checking for MPI_INIT_THREAD.
This commit was SVN r13353.

The following Trac tickets were found above:
  Ticket 830 --> https://svn.open-mpi.org/trac/ompi/ticket/830
2007-01-29 21:56:15 +00:00
Jeff Squyres
0ce78f22fa Compliments r13351 -- use the new field on the ompi_proc_t struct to
know what my local rank is, and therefore set my paffinity ID as
appropriate.  Specifically, we're no longer relying on the
special/secret mpi_paffinity_processor MCA parameter that the orted
would set for us.

This allows processor affinity to be used in environments where the
orted is not used (e.g., bproc, and someday in the hopefully not
too-distant future, SLURM).

This commit was SVN r13352.

The following SVN revision numbers were found above:
  r13351 --> open-mpi/ompi@a338b7e533
2007-01-29 21:53:04 +00:00
Ralph Castain
a338b7e533 Update the proc system to compute and store the number of local procs and my local relative rank during the callback at STG1. This info will be used to locally compute and set the processor affinity and sched_yield (for oversubscribed conditions).
Over to Jeff now for modifying mpi_init accordingly.

Until Jeff makes his changes, nobody should see anything different as the new info just isn't used by anything!

This commit was SVN r13351.
2007-01-29 20:54:55 +00:00
Jeff Squyres
c9f072b84f Strike down a few more stray places that were registering
mpi_leave_pinned and replace them with the one central global
variable.

This commit was SVN r13349.
2007-01-29 20:24:31 +00:00
Brian Barrett
93a2f31932 Use a recursive halving communication algorithm similar to the one used by
MPICH2 for "small" commutative operations in the reduce_scatter basic
implementation.  "small" is currently pretty big, as it doesn't take
much to beat reduce/scatterv.  Need to do much more than this for
better all around performance of MPI_Reduce_scatter, but this was enough
to solve the problems I was having.

This commit was SVN r13348.
2007-01-29 19:29:35 +00:00
Jeff Squyres
61bc9fed3c Duh. Free the temp array when we're done with it. While we're making
this switch, use a clear variable name, too.

This commit was SVN r13347.
2007-01-29 19:04:57 +00:00
Jeff Squyres
e6a0069e95 Fix from an as-yet uncommitted test that Pak will commit shortly.
Found another places that we were incorrectly casting a C++ MPI handle
array to the corresponding C array type and hoping for the best (which
won't work at all).  This commit fixes things so that we now do the
proper conversion between C<-->C++ handles.

This commit was SVN r13346.
2007-01-29 18:44:46 +00:00
Rainer Keller
ca35881cd0 - Minor bugfixes and removed compiler warnings
This commit was SVN r13343.
2007-01-28 19:52:09 +00:00
Jeff Squyres
3c5c8c3c4c Refinement of Rainer's r13227 and r13228 (worked with Rainer, Ralph,
and George on these refinements):

 * Rename the static OBJ initializer macro to be
   OPAL_OBJ_STATIC_INIT(class)
 * Ensure that all static OBJ initializations get a refcount of 1
   (doesn't ''really'' matter, since they're static, it should never
   get to the point where the OBJ is DESTRUCTed, but more correct
   nonetheless)
 * Add a "magic number" to the OBJ when compiling with debug support.
   The magic number does some rudimentary support to ensure that
   you're operating on a valid OBJ (and fails an assertion if you're
   not).  Check to ensure that the memory contains the magic number
   when performing actions of OBJ's.  Also remove the magic number
   when DESTRUCTing OBJs, so that if, for example, an OBJ is
   DESTRUCTed more than once, we'll fail the magic number assert.

This commit was SVN r13338.

The following SVN revision numbers were found above:
  r13227 --> open-mpi/ompi@96030de97b
  r13228 --> open-mpi/ompi@c2e9075d29
2007-01-27 13:44:03 +00:00
Jelena Pjesivac-Grbovic
33dcb4f810 Minor change to linear alltoall algorithm:
- post isends in reverse order of posting irecvs.
if the messages arrive approximately in order, this should 
minimize the time spent in matching the requests.

I did not see any performance difference over MX up to 64 nodes, but 
the change makes sense and may have some impact when we have (many) 
more nodes.

This commit was SVN r13337.
2007-01-26 21:59:31 +00:00
Brian Barrett
385a435813 Start long message send as soon as possible, to minimze ack time for the receive,
greatly increasing mid-range bandwidth

This commit was SVN r13317.
2007-01-25 23:07:03 +00:00
Rich Graham
1c20feb52b Take into account constants that in the cray headers are defined different than in the portals spec.
This commit was SVN r13311.
2007-01-25 18:32:47 +00:00
Jeff Squyres
7b6ed64c7b Add in the hostname to the BTL_* output macros so that you can tell on
which node an event occurred.

This commit was SVN r13302.
2007-01-25 14:02:54 +00:00
George Bosilca
f9a3bbfd7a Don't miss the ODLS component from the output.
This commit was SVN r13299.
2007-01-25 08:37:36 +00:00
Jeff Squyres
b9120aed6d Always make sure to create $(includedir)/openmpi, even if we were
configured with --disable-mpi-cxx so that the default -I flags in the
wrapper compilers don't point to a directory that doesn't exist.
Thanks to Martin Audet for identifying the problem.

This commit was SVN r13296.
2007-01-25 01:59:22 +00:00
Jeff Squyres
6fea000e5f Oops -- get the right function name (copy-n-paste error).
This commit was SVN r13290.
2007-01-24 22:31:13 +00:00
Jeff Squyres
6b69ea664d Make a much, much better error message for a not-uncommon failure
scenario (user/sysadmin forgot to set the memlock limits high
enough).

This commit was SVN r13289.
2007-01-24 22:25:40 +00:00
Patrick Geoffray
b252cb82c8 oops, ".", not "->", copy error...
This commit was SVN r13287.
2007-01-24 19:16:46 +00:00
Patrick Geoffray
d58f6b2451 Free memory in synchronous send case if free_after requires it.
Fixes memory leak using synchronous sends and custom data types.

This commit was SVN r13286.
2007-01-24 19:10:38 +00:00
George Bosilca
d19a4f4740 Cast it to make cl happy.
This commit was SVN r13267.
2007-01-24 00:51:01 +00:00
George Bosilca
790f175d4e Explicit conversions to make the code Windows friendly.
This commit was SVN r13266.
2007-01-24 00:50:24 +00:00
George Bosilca
a4488ff8d2 Add explicit conversions.
This commit was SVN r13265.
2007-01-24 00:49:08 +00:00
George Bosilca
6f720f0d26 Add all required explicit conversions in order to be able
to build on Windows.

This commit was SVN r13264.
2007-01-24 00:48:16 +00:00
Jeff Squyres
c9fe68c406 Better patch from Gleb to do the per-port (endpoint) specification of
whether to use eager RDMA or not

This commit was SVN r13262.
2007-01-23 22:40:59 +00:00
Jelena Pjesivac-Grbovic
5cbcf42dc3 Removing yet another unsed variable (missed it in previous submit).
This commit was SVN r13259.
2007-01-23 21:30:57 +00:00
Jelena Pjesivac-Grbovic
afbd032ff9 Removing compiler warnings about comparison of unsigned values to signed ones, and
unused variables.

This commit was SVN r13258.
2007-01-23 21:10:07 +00:00
Jelena Pjesivac-Grbovic
568477ade8 Adding new Allreduce algorithms, updating allreduce decision function, and cleaning up util.
- Allreduce algorithms:
  - Recursive doubling is used for small messages (up to 10KB) and can be used for 
    both commutative and non-commutative operations.  
	 Recursive doubling passed OCC, IMB-3.2, Intel (Allreduce_c, Allreduce_loc_c, and
	 Allreduce_user_c), mpi_test_suite (Allreduce MIN/MAX, and Allreduce MIN/MAX with 
	 MPI_IN_PLACE) tests on TCP up to 36 nodes and MX up to 64 nodes.
  - Ring algorithms performs well for larger messages but cannot be used for 
    non-commutative operations.  It passed the same tests as recursive doubling, except
	 some of the non-commutative tests in Intel benchmarks Allreduce_loc_c and Allreduce_user_c
	 (which was expected).
- MPI_Allreduce with new decision function passed all of the tests mentioned above.
- Cleaning up coll_tuned_util.  Moving isendrecv to static inline just like sendrecv. 

This commit was SVN r13252.
2007-01-23 01:19:11 +00:00
Jeff Squyres
3389a523e9 Arrgh. That printf should not have been in there!
This commit was SVN r13243.
2007-01-22 18:52:49 +00:00
Jeff Squyres
a24f3c0886 Move the "use eager RDMA" flag to the individual openib BTL modules,
not the component.  This potentially allows for a mix of HCAs that
support eager RDMA and those who do not on a port-by-port basis.

This commit was SVN r13242.
2007-01-22 18:49:32 +00:00
Jeff Squyres
91b855c2f4 Minor fixes in the help messages
* If the text to cite where the problem occurred is "\n", prettyprint
   somethign a little nicer so that it's clear that we're talking
   about the end of line
 * Add a missing help message ("ini file:unknown field"), and display
   it a little better (i.e., show the erroneous field, not a
   misleading "end of line" marker)
 * It's "OpenIB", not "Open IB"

This commit was SVN r13241.
2007-01-22 18:45:43 +00:00
George Bosilca
242292673a sendrecv is a static inline.
This commit was SVN r13237.
2007-01-22 05:50:23 +00:00
George Bosilca
c0b22678a7 OMPI_ENABLE_DEBUG is always defined. Remove all warnings when compiled in
non debug mode.

This commit was SVN r13230.
2007-01-21 18:14:06 +00:00
Rainer Keller
c2e9075d29 - Define a OPAL_CLASS_EMPTY to be used for initialization.
Similar within the dt_module for the predefined datatypes.

This commit was SVN r13228.
2007-01-21 15:52:06 +00:00
Rainer Keller
96030de97b - Initialize the size of the opal_object class.
- Use the OBJ_CLASS_INSTANCE macro to initialize classes.
   This also gets rid of several missing initialization errors.

This commit was SVN r13227.
2007-01-21 14:24:29 +00:00
Jeff Squyres
52ca6cf86c The mpi_leave_pinned and mpi_leave_pinned_pipeline MCA parameters were
needlessly registered in multiple different places, and none of them
had a good help string.  There was also an inconsistent check for
setting both mpi_leave_pinned and mpi_leave_pinned_pipeline (i.e., it
was only in ob1).  This commit moves the registration of these params
to one central place (ompi/runtime/ompi_mpi_params.c, with all other
mpi_* MCA params) and uses globals to propagate the values as
relevant.  The error check was also moved to the central location to
ensure that we can consistency everywhere.

This commit was SVN r13226.
2007-01-21 14:02:06 +00:00
Jeff Squyres
32bfbfc735 Correct a filename that would prevent show_help messages from
appearing properly.

This commit was SVN r13225.
2007-01-21 13:56:16 +00:00
Rainer Keller
3f397f3848 - Do not convert the cart_comm -- its intent is out.
This commit was SVN r13224.
2007-01-21 13:00:23 +00:00
Rainer Keller
235f87fd14 - Small cleanups, getting rid of variables, using
index early, etc.

This commit was SVN r13222.
2007-01-19 23:28:04 +00:00
Rainer Keller
125ba1acfa - Reduce the amount of warnings with -Wshadow -- mainly due to
usage of index and abs in inline-fcts in header files.

This commit was SVN r13217.
2007-01-19 19:48:06 +00:00
Jeff Squyres
e934272f3e Commit data supplied by Christian Bell at QLogic for their vendor and
part ID's.

This commit was SVN r13216.
2007-01-19 19:46:29 +00:00
Sven Stork
862dcb1a34 - fix compiler warning in ia64
This commit was SVN r13212.
2007-01-19 14:48:47 +00:00
Rolf vandeVaart
6a260e4a9a Fix two problems. For MPI_Buffer_detach, do not attempt to
return the buffer address from Fortran. It is not expected
behavior.  For MPI_Buffer_attach, adjust the address of
the buffer handed in so it is always aligned.  

Refs trac:750
Buffer detach reviewed by Jeff Squyres
Buffer attach alignment reviewed by George Bosilca

This commit was SVN r13205.

The following Trac tickets were found above:
  Ticket 750 --> https://svn.open-mpi.org/trac/ompi/ticket/750
2007-01-18 23:32:39 +00:00
Ralph Castain
4ef4cbb5ad Fix a compiler warning about comparing signed/unsigned values
This commit was SVN r13190.
2007-01-18 17:14:06 +00:00
Gleb Natapov
4c7dbd36c7 Balance RDMA operation in round robin fashion between all available RDMA BTLs.
OB1 always use first element from array of BTLs available for RDMA. The patch
change the array creation algorithm, it puts different BTL in the first element
in round robin fashion.

This commit was SVN r13174.
2007-01-18 09:15:18 +00:00
Jeff Squyres
53c4bcccd5 Fix a problem noted by Tim Campbell: the type of the first parameter
to the F90 binding for MPI_INITIALIZED was wrong (should have been
logical, not integer).

Fixes trac:782.

This commit was SVN r13170.

The following Trac tickets were found above:
  Ticket 782 --> https://svn.open-mpi.org/trac/ompi/ticket/782
2007-01-17 22:44:47 +00:00
Jeff Squyres
a3aae09ca3 Since we've found a few MPI_Fint/MPI_Aint problems in the F77 bindings
recently, I went through and took a closer look this afternoon and
fixed a bunch more places where this problem occurred.

This commit was SVN r13166.
2007-01-17 22:17:34 +00:00
Brian Barrett
860fd63710 lower priority of rdma one-sided component so that pt2pt is preferred for most
people, so that it gets more testing

This commit was SVN r13163.
2007-01-17 22:01:03 +00:00
Jelena Pjesivac-Grbovic
85192c01b0 Modifying util functionality:
- removing static qualification on ompi_coll_tuned_sendrecv 
- adding ompi_coll_tuned_isendrecv function which posts isend and irecv requests
These changes are separate from but necessary for new algorithms I am working on.

This commit was SVN r13161.
2007-01-17 21:29:13 +00:00
Brian Barrett
95c0a17b9a Send the unlock request before starting the requests. We won't unlock until we get an ack from the remote side,
so there's no longer a race there (I used to do the unlock request last, after local completion of all the
requests completed, to try to avoid having the passive side reply to the active side, but I don't do that
anymore).  The unlock side will not "unlock" the window until it actually receives the correct number of results,
so we're good there.

This fixes an issue where we would receive data on the remote side we weren't expecting that could cause
us to release a lock before it really should have been released to the requesting peer.  It could also
cause a deadlock if one of the processes trying to unlock was "self", as that would result in the active
unlock never sending the unlock request, even though it sent the payload, which could cause a counter
that should always be positive to hit -1, causing an infinite loop that could only be solved by
popping up the stack, which was an impossibility.

Refs trac:785

This commit was SVN r13160.

The following Trac tickets were found above:
  Ticket 785 --> https://svn.open-mpi.org/trac/ompi/ticket/785
2007-01-17 21:13:12 +00:00
Brian Barrett
c1be97199b Fix an issue with recursive calls into the component progress caused by btls sometimes calling opal_progress()
during their send calls by dropping the loop through the list of pending control messages if any are marked
as completed.

Refs trac:784

This commit was SVN r13159.

The following Trac tickets were found above:
  Ticket 784 --> https://svn.open-mpi.org/trac/ompi/ticket/784
2007-01-17 20:48:35 +00:00
Jeff Squyres
52e8089600 Fix compiler warning.
This commit was SVN r13148.
2007-01-17 14:23:46 +00:00
Jeff Squyres
9073b9cd3c Ensure to use datatype_index consistently. Only a problem for
compilers where the MPI_Fint representation is not the same as int,
but still...

This commit was SVN r13141.
2007-01-17 12:34:30 +00:00
Brian Barrett
32bdc47816 Fix a number of places where MPI_Fint was used where the standard specifies
MPI_Aint.  On 64-bit big endian machines, these can have some unpleasent
issues.

Refs trac:734

This commit was SVN r13140.

The following Trac tickets were found above:
  Ticket 734 --> https://svn.open-mpi.org/trac/ompi/ticket/734
2007-01-17 06:41:53 +00:00
Brian Barrett
35c57457c6 Don't call ompi_request_test() if the request isn't likely to finish.
Otherwise, we end up recursively calling into the progress functions
and corrupting a list that doesn't like to be corrupted.

Refs trac:561

This commit was SVN r13138.

The following Trac tickets were found above:
  Ticket 561 --> https://svn.open-mpi.org/trac/ompi/ticket/561
2007-01-17 02:30:11 +00:00
Jeff Squyres
754042f1fc Fix a compiler warning.
This commit was SVN r13134.
2007-01-16 23:03:17 +00:00
Jeff Squyres
fbeaf0919d Fixes trac:732.
The 2nd parameter in MPI_WIN_CREATE is actually an address integer,
not a regular integer.  The F77 prototype for this function was wrong,
causing Bad Things on some 64 bit platforms (on other 64 bit
platforms, we just got lucky).

This commit was SVN r13133.

The following Trac tickets were found above:
  Ticket 732 --> https://svn.open-mpi.org/trac/ompi/ticket/732
2007-01-16 22:22:08 +00:00
George Bosilca
3a07982ae7 This file is just a left over from a dark past.
This commit was SVN r13132.
2007-01-16 22:02:13 +00:00
Brian Barrett
f03ffb3a62 Send reply from the passive side of an unlock request back to the active
side and only let MPI_WIN_UNLOCK return when the passive side has actively
replied that the window is unlocked.

Refs trac:761

This commit was SVN r13118.

The following Trac tickets were found above:
  Ticket 761 --> https://svn.open-mpi.org/trac/ompi/ticket/761
2007-01-14 22:08:38 +00:00
Brian Barrett
ba8c8ce92c Improve checking of origin and target datatypes when using MPI_ACCUMULATE
to pass some of the tests provided by Sun.  These will, of course, greatly
slow down calls to MPI_ACCUMULATE, but there's no way to pass the test
suite without them :/.

Refs trac:760

This commit was SVN r13117.

The following Trac tickets were found above:
  Ticket 760 --> https://svn.open-mpi.org/trac/ompi/ticket/760
2007-01-14 21:42:25 +00:00
Brian Barrett
e93eaa0790 Remote pointers are always in .lval, not .pval, so need to read the .lval
and convert it to a pointer when finding the destination addr.

Refs trac:587

This commit was SVN r13116.

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2007-01-14 20:34:41 +00:00
Jeff Squyres
d5404f21a3 Make the trunk openib btl compile again.
This commit was SVN r13110.
2007-01-13 14:22:42 +00:00
Galen Shipman
4a6ad30440 remove unused macro calls..
This commit was SVN r13107.
2007-01-12 23:17:17 +00:00
Galen Shipman
2097d174f6 heterogeneous fixes to the OpenIB BTL. This includes work by nysal, brian and
I. 

This commit was SVN r13106.
2007-01-12 23:14:45 +00:00
Galen Shipman
df099a4731 call it what it is...
we are looking at subnet_id's and we are counting active ports per subnet. 
move subnet count out of procs loop,, no need to do it there... 

This commit was SVN r13105.
2007-01-12 22:42:20 +00:00
Brian Barrett
075161afa9 Enable MX wireup in heterogeneous situations.
Refs trac:587

This commit was SVN r13095.

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2007-01-12 15:44:58 +00:00
Donald Kerr
ed097d17c1 fix for bug #749, though I can not confirm without a linux compiler
This commit was SVN r13090.
2007-01-11 22:25:13 +00:00
Donald Kerr
80f2cbb498 add udapl rdma capabilities into the udapl btl
This commit was SVN r13082.
2007-01-11 15:22:08 +00:00
Jeff Squyres
e5205657cf A much better fix for #739. No configure test -- just do a simple
memcpy() instead of assigning the struct's by value.

Fixes trac:739.

This commit was SVN r13081.

The following Trac tickets were found above:
  Ticket 739 --> https://svn.open-mpi.org/trac/ompi/ticket/739
2007-01-11 14:30:32 +00:00
Jeff Squyres
add3909096 Back out 13076 and 13077 in favor of a much simpler approach.
Sorry for the configure change -- hopefully it's early enough in the
morning that it won't affect people... (new approach won't have a
configure change).

Refs trac:739.

This commit was SVN r13080.

The following Trac tickets were found above:
  Ticket 739 --> https://svn.open-mpi.org/trac/ompi/ticket/739
2007-01-11 14:07:15 +00:00
George Bosilca
53d87897c8 Once we start the C requests we have to put back their f_to_c index
in the fortran array, as we might get new C requests from the startall
function.

This commit was SVN r13079.
2007-01-11 08:39:42 +00:00
George Bosilca
ceb5d436d8 Missing an include.
This commit was SVN r13078.
2007-01-11 05:45:13 +00:00
George Bosilca
24a91fad1d OPAL_BOOL_STRUCT_COPY or OMPI_BOOL_STRUCT_COPY that's the question!
Let's minimize the disturbances and say that the configure system is right.
From now on it's OPAL_BOOL_STRUCT_COPY. This one is related to r13076 and
has to follow when r13076 goes in the 1.2.

This commit was SVN r13077.

The following SVN revision numbers were found above:
  r13076 --> open-mpi/ompi@f0932a0701
2007-01-11 05:44:48 +00:00
Jeff Squyres
f0932a0701 A workaround for a bug in the PGI 6.2 compiler series. This bug has
been fixed in the 7.0 PGI series, but is unlikely to be fixed in the
6.2 series:

 * Add a configure test looking for the bad behavior (the PGI compiler
   chokes on C code where structs containing bool's are copied by
   value)
 * Set OMPI_BOOL_STRUCT_COPY to 1 if it's ok, 0 if it's not (i.e., PGI
   6.2 series will have this value set to 0)
 * In two places in the code base -- orte-clean and btl_openib_ini.h,
   we have a struct that contains a bool that is copied by value.  In
   these two places, check OMPI_BOOL_STRUCT_COPY and if it's 1, use
   the "int" type instead of "bool".

Fixes trac:739

This commit was SVN r13076.

The following Trac tickets were found above:
  Ticket 739 --> https://svn.open-mpi.org/trac/ompi/ticket/739
2007-01-11 02:21:26 +00:00
Jelena Pjesivac-Grbovic
d2921a9d42 Cleanup of Barrier implementation:
- utilizing coll_tuned_util functions
- setting line length to 80.

This implementation uses standard send messages (instead of synchronous ones).
The change improved our performance over MX multiple number of times, however,
there exists a small potential that last message to be sent can be delayed 
(until next mpi call, which means potentially infinitely).

If this shows to be a problem, I will modify the algorithms to use synchronous
send as last operation (which will incur performance penalty again).

This commit was SVN r13071.
2007-01-10 22:49:43 +00:00
Jelena Pjesivac-Grbovic
ccc3ee0b6b Minor changes to allgather implementation with some clean-up of util code.
- in allgather algorithms I replaces irecv-isend-waitall sequence with 
  call to ompi_coll_tuned_sendrecv
- most of the functions in util code and allgather decision function conform to 80 character line width.
- 

This commit was SVN r13069.
2007-01-10 21:56:59 +00:00
Josh Hursey
93208445fd Make sure we wireup the 'verbose' MCA parameter for the BTL's.
This commit was SVN r13067.
2007-01-10 21:24:35 +00:00
Pak Lui
ff1dd4f16d * fixes ticket #730 for supporting both of the pre-errata argument set and
post-errata argument set of MPI::Win::Get_attr

This commit was SVN r13063.
2007-01-10 16:41:21 +00:00
Pak Lui
de51464aad * fix #730 for removing an extra argument from MPI::Win::Get_attr as being
corrected in the MPI 2.0 errata.
 * initialized some variables to make our sensitive sun compiler not to 
   not warn about them when user apps are compiling.

This commit was SVN r13058.
2007-01-09 23:48:39 +00:00
Gleb Natapov
624f139bd8 This commit fixes trac:729. Initialize pointer to registration to NULL. Otherwise
it may contain garbage and we will try to unregister it later in btl_free().

This commit was SVN r13054.

The following Trac tickets were found above:
  Ticket 729 --> https://svn.open-mpi.org/trac/ompi/ticket/729
2007-01-09 10:29:20 +00:00
Gleb Natapov
d3ac56272a Prevent access to openib_btl after free().
This commit was SVN r13052.
2007-01-09 09:07:32 +00:00
George Bosilca
87ff2b5ce8 Cast to the correct type.
This commit was SVN r13046.
2007-01-08 22:04:01 +00:00
George Bosilca
f419960c7f All files have to include ompi_config.h before anything else.
This commit was SVN r13045.
2007-01-08 22:03:16 +00:00
George Bosilca
53ddbe8446 Nothing relevant.
This commit was SVN r13044.
2007-01-08 22:02:17 +00:00
George Bosilca
e72b0c1044 Some compilers (VC) don't like conversions between int and bool.
This commit was SVN r13043.
2007-01-08 22:00:49 +00:00
Brian Barrett
e130f18cc2 Fix some compiler warnings that have slipped in lately...
This commit was SVN r13037.
2007-01-08 17:20:09 +00:00
Brian Barrett
a34e67d743 Remove unneeded PARAM_INIT_FILE variable in configure.params files used by
components that use configure.m4 for configuration or are always built. 
The macro has not been needed since moving to configure types other than
configure.stub

Fixes trac:590

This commit was SVN r13031.

The following Trac tickets were found above:
  Ticket 590 --> https://svn.open-mpi.org/trac/ompi/ticket/590
2007-01-08 03:44:22 +00:00
Brian Barrett
b8413fb1d5 Just cast the pointer to a uintptr_t then to the match bits, instead of abusing the ompi_ptr_t interface. Not critical for v1.2, as there are no portals platforms that are big endian, so the code in v1.2 will work well enough for now
This commit was SVN r13024.
2007-01-07 03:11:27 +00:00
Brian Barrett
8900d3ae43 Second take at fixing the issues with using ompi_ptr_t. Add helper functions for converting from .pval to .lval and vice-versa. Users of ompi_ptr_t types should only use one of the fields in the union unless using the helper conversion functions. For the BTLs, local pointers will always be stored in the .pval field and remote pointers always stored in the .lval field.
George wrote the initial patch, I extended it slightly and am responsible for all bugs found.

Refs trac:587

This commit was SVN r13023.

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2007-01-07 01:48:57 +00:00
Jelena Pjesivac-Grbovic
eae3df4904 Updated broadcast decision function based on MX results up to 64 nodes.
(The previous decision function did not consider binomial algorithm (since we did not have it at the time)).

This commit was SVN r13007.
2007-01-06 00:37:40 +00:00
Jeff Squyres
1bdf883277 Oops --- don't need those header files.
This commit was SVN r13000.
2007-01-05 00:08:16 +00:00
Jeff Squyres
fc3637a7c6 Take out the checks for NULL and STATUS[ES]_IGNORE -- it turns out
that a) STATUS[ES]_IGNORE *is* NULL, and b) ROMIO blindly sends its
status through to STATUS_SET_ELEMENTS, even if the status is IGNORE.
So we have some legal cases where IGNORE can be passed through here.

Well, that's what we get for trying to do good error checking.  :-(

This commit was SVN r12999.
2007-01-04 23:03:36 +00:00
Jeff Squyres
75df4ca602 Minor fixes for MPI-level aborting:
- Fix some fpritnf's in ompi_mpi_abort() that incorrectly assumed that
  we were always being invoked from MPI_ABORT (ompi_mpi_abort() may be
  invoked from a bunch of different places)
- Also try to opal_backtrace_print() if opal_bactrace_buffer() is not
  supported. 
- Print a message in MPI_ABORT if we're aborting.

This commit was SVN r12998.
2007-01-04 22:30:28 +00:00
Brian Barrett
48ec0b2071 Revert out r12974, 12976, and 12991 as George has provided a less intrusive fix
for now...

This commit was SVN r12997.

The following SVN revision numbers were found above:
  r12974 --> open-mpi/ompi@27cea44a9c
2007-01-04 22:07:37 +00:00
Galen Shipman
d207a6c988 endpoint should use a uint64_t for subnet, as everyone else does.. makes bad
things happen when packing into a 64 bit buffer... 

Misc cleanup.. 

This commit was SVN r12993.
2007-01-04 20:25:28 +00:00
Brian Barrett
936fdd2ae1 remove some code that accidently came in with r12974. Refs trac:587
This commit was SVN r12991.

The following SVN revision numbers were found above:
  r12974 --> open-mpi/ompi@27cea44a9c

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2007-01-04 20:17:07 +00:00
Galen Shipman
931a389c4f fix deadlock on rendezvous protocol..
This commit was SVN r12982.
2007-01-04 03:46:11 +00:00
Galen Shipman
f12bbe0591 Handle different subnets correctly and multiple nic endpoint negotiation
This is somewhat limited currently for expample,  if you have 3 ports on Node A and 5 ports
on Node B then the peers will use 3 ports to communicate with each other. 
This is on a subnet basis, so for any pair of nodes we take the
intersection of the available ports within a subnet.

We use subnets to determine reachability for lazy connection establishment. So
if Node A and Node B each have two HCA's (on seperate networks) then the
subnet's must be distinct, otherwise we will try to wire up HCA's on seperate
networks.  

This commit was SVN r12978.
2007-01-03 22:35:41 +00:00
Brian Barrett
7cac26d240 * fix some typos that slipped in with r12974. Refs trac:587
This commit was SVN r12976.

The following SVN revision numbers were found above:
  r12974 --> open-mpi/ompi@27cea44a9c

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2007-01-03 20:14:45 +00:00
George Bosilca
1be60e802f Add the DECLSPEC.
This commit was SVN r12975.
2007-01-03 19:59:18 +00:00
Brian Barrett
27cea44a9c Fix a number of issues with the ompi_ptr_t:
* Make sure that the pval always writes to the correct portion of the
    lval.  This only matters on 32 bit big endian machines.
  * On 32 bit machines when assigning to pval, the other 4 bytes of lval
    weren't being written, which could lead to bogus data

We use macros so that there aren't casts all over the code and the pval
assignment can occur to the correct 4 bytes.  Refs trac:587

This commit was SVN r12974.

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2007-01-03 19:47:48 +00:00
Gleb Natapov
a6127fd8ce Increase req_bytes_delivered atomically.
This commit was SVN r12971.
2007-01-03 15:19:34 +00:00
Gleb Natapov
79202561f6 Don't check req_pipeline_depth on frag completion. Checking of
req_bytes_delivered should be enough.

This commit was SVN r12967.
2007-01-03 14:44:20 +00:00
Gleb Natapov
1ad6c41735 Sender can start scheduling send fragments immediately after receiving ACK. No
need to wait for RNDV completion.

This commit was SVN r12965.
2007-01-03 12:37:11 +00:00
Rich Graham
8a9da02063 change code to conform with coding standard.
Handle error condition where shared memory file is not created.

This commit was SVN r12964.
2007-01-03 00:06:02 +00:00
Donald Kerr
899297c8f4 udapl btl was not compiling after r12878 on 12/17/2006, some minor changes to allow btl to compile
This commit was SVN r12963.

The following SVN revision numbers were found above:
  r12878 --> open-mpi/ompi@190e7a27cd
2007-01-02 21:44:12 +00:00
Jeff Squyres
ea2d49e55d Because of r12712, we actually need to allocate one ''more'' item than
the value of __n holds.  This is not a problem in the first case
because sizeof(int) == sizeof(MPI_Flogical), so no alloc is actually
performed (which is most compilers, and why we haven't been bitten by
this yet).  But the second case -- where sizeof(int) !=
sizeof(MPI_Flogical) -- is definitely a problem and needs the "+1" in
the alloc, or Bad Things will happen.

This commit was SVN r12953.

The following SVN revision numbers were found above:
  r12712 --> open-mpi/ompi@3e11c76d4c
2007-01-02 16:16:29 +00:00
George Bosilca
3cde822d98 Add missing headers.
This commit was SVN r12951.
2007-01-02 08:04:34 +00:00
George Bosilca
d8dee3a740 If the MX driver was unable to load correctly, or if the endpoint was not
created then don't try to call the MX endpoint close function.

This commit was SVN r12950.
2007-01-02 00:01:50 +00:00
Rich Graham
6cb2377015 Change the allocation of the shared memory backing file. The file
is allocated on a per comm_world instance, with the lowest rank
in comm_world on the given host creating and initializing the file,
and then notifying the remaining files via the OOB.

Reviewed: Ralph Castain, Brian Barrett
Addressing ticket #674.

This commit was SVN r12949.
2007-01-01 02:39:02 +00:00
George Bosilca
e223b27268 A fragment is marked completed by the PML when the peer signal the
completion of the RDMA operation associated with the fragment. The
PML will call the BML free which in turn will call the BTL free. The MX 
BTL will not release the fragment if it not tagged with 0xff.

This commit was SVN r12947.
2006-12-31 03:17:47 +00:00
Brian Barrett
2951586b43 Fix type casting issue with MPI_ERRCODES_IGNORE that would cause
errors when using a C++ compiler.  

This commit was SVN r12946.
2006-12-31 02:51:13 +00:00
Brian Barrett
1ba97181dc A number of MPI-2 compliance fixes for the C++ bindings:
* Added Create_errhandler for MPI::File
  * Make errors_throw_exceptions a first-class predefined exception
    handler, and make it work for Comm, File, and Win
  * Deal with error handlers and attributes for Files, Types, and Wins
    like we do with Comms - can't just cast the callbacks from C++
    signatures to C signatures.  Callbacks will then fire with the
    C object, not the C++ object.  That's bad.

Refs trac:455

This commit was SVN r12945.

The following Trac tickets were found above:
  Ticket 455 --> https://svn.open-mpi.org/trac/ompi/ticket/455
2006-12-30 23:41:42 +00:00
George Bosilca
47601e315e Allow the MX BTL to select at runtime if the unexpected handler will
be activated or not.

This commit was SVN r12944.
2006-12-30 20:57:50 +00:00
Brian Barrett
4e157380bf Heterogeneous support changes:
* Add line about heterogeneous support to ompi_info output
  * Print warning and abort if heterogeneous detected and 
    no heterogeneous support available.

Refs trac:587

This commit was SVN r12943.

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2006-12-30 17:13:18 +00:00
Brian Barrett
99c0a29602 Disable CM and DR PMLs in heterogeneous situtations as neither are
heterogeneous safe.

Refs trac:587

This commit was SVN r12942.

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2006-12-30 16:17:56 +00:00
George Bosilca
d401a65975 Minor cleanups. Don't set the fields that will never be used.
This commit was SVN r12941.
2006-12-29 07:55:17 +00:00
George Bosilca
0b5d879a63 ompi_convertor_pack do not return errors (all checkings are done when the
convertor is created).

This commit was SVN r12940.
2006-12-29 07:40:02 +00:00
George Bosilca
d8db9e49f3 Set the bml_btl to NULL or segfault !!!
This commit was SVN r12939.
2006-12-29 07:38:24 +00:00
Brian Barrett
c010119667 If a BTL isn't needed due to exclusivity ranking, need to call a matching
inuse decrement for the increment that was at the start of the procs loop.
Otherwise, the inuse count can end up higher than it actually is and a btl
can end up in the progress loop when it isn't active to any peer.

Refs trac:543

This commit was SVN r12938.

The following Trac tickets were found above:
  Ticket 543 --> https://svn.open-mpi.org/trac/ompi/ticket/543
2006-12-29 02:22:40 +00:00
George Bosilca
416e5b5f6a Enable the MX extensions if and only if the mx_extensions.h header
is installed on the system.

This commit was SVN r12937.
2006-12-29 00:31:32 +00:00
George Bosilca
d7bc180a90 The max allocated tag is not 16. Use the define instead.
This commit was SVN r12936.
2006-12-28 22:48:58 +00:00
George Bosilca
3eeecc3838 Add support for faster small messages. While sending a message, we check if
the data was buffered by the MX library. If it's the case then we declare
the send as completed and disable the completion event for the mx request.

This commit was SVN r12935.
2006-12-28 22:34:24 +00:00
Brian Barrett
f191a042f6 Fix compile errors in heterogeneous code when not building heterogeneous
support.

Refs trac:701

This commit was SVN r12932.

The following Trac tickets were found above:
  Ticket 701 --> https://svn.open-mpi.org/trac/ompi/ticket/701
2006-12-28 20:28:14 +00:00
George Bosilca
b996c00d1a Set the limits for the MX fragments to 4K. Add code to dump the state of the MX
hardware (not activated).

This commit was SVN r12931.
2006-12-28 08:40:37 +00:00
George Bosilca
3903009b8b Add a check for the unexpected handler. If enabled, allow the zero-copy
protocol over the MX BTL. Now, we have only one matching, the one in Open
MPI.

The problem is that when the unexpected handler is triggered, not all the
message is on the host memory. In the best case we get one MX fragment (internal
MX fragment), in the worst we get NULL. The only way to fit this with the
design of the PML is to force the eager protocol at the MX internal fragment
size, and to limit the send/receive protocol at the same size. Tests show
the outcome is not far from optimal (if the pipeline depth is increased
a little bit).

Set MX_PIPELINE_LOG in order to allow MX to use internal fragments of 4K.

This commit was SVN r12930.
2006-12-28 03:35:41 +00:00
George Bosilca
ff2319dcb7 Complete the OUT protocol. Small latency improvements. Some minor cleanups.
Create some macros, reorder some functions. Make sure all fragments are
correctly released at the end.

This commit was SVN r12926.
2006-12-26 18:15:24 +00:00
George Bosilca
75a35ed7ee Implement the PUT protocol over MX. The send/receive approach give the best
performance on a 2G Myrinet card, as it look like pipelining the messages
by 1M is faster than a simple send/receive. However, when using a 10G card
the send/receive will limit the maximum bandwidth to 2.5Gbs. The reason is
the scarce bus resources that have to be shared between the Myrinet hardware
and the memcpy operation. The PUT protocol remove the memcpy, we now have a 
true zero-copy mechanism. But, there is no pipelining yet as it look like the
RDMA pipeline somehow disappeared from the OB1 PML ...

This commit was SVN r12925.
2006-12-24 22:52:46 +00:00
George Bosilca
e8bd985870 Add more output when calls to the MX library fails.
Move the connection status from theproc into the endpoint.

This commit was SVN r12924.
2006-12-24 22:34:48 +00:00
George Bosilca
14dc72f595 Allow the user to change the MX flags.
This commit was SVN r12923.
2006-12-24 22:21:00 +00:00
George Bosilca
dbe2798638 Allow MX to handle shared memory and self communications. By default these features
are disabled (btl_mx_shared_mem respectively btl_mx_self have to be set in order
to activate them).

This commit was SVN r12922.
2006-12-24 22:18:41 +00:00
Jelena Pjesivac-Grbovic
3494e1bb05 - Updated decision function for Alltoall collective.
Fixes "jump" for intermediate sizes message on 24+ number of nodes
    (at least on Grig cluster).

This commit was SVN r12920.
2006-12-22 19:59:17 +00:00
George Bosilca
b1725e02d4 No more warnings plus some code reordering.
This commit was SVN r12919.
2006-12-21 22:42:15 +00:00
Edgar Gabriel
dc532577db Adding more accurate checking of the input parameters for the
add_error_class and add_error_code files. Also fixed the update of the
lastusedcode attribute, all of work according to my tests pretty fine.

Please note: the testcode attached to the bug 683 still reports some bugs. I
am however pretty sure that the testcode is wrong at that points:
 - the standard says that the attribute MPI_LASTUSEDCODE has to be updated for
 a new error_class or a new error_code. The test currently assumes, that only
 the add_error_code call changes the attribute value.
 - you have to comment out the two lines 73 and 74 in order to make the
 test finish, since these lines check for the error string of non-existent
 codes.
- line 126 the error-string of MPI_ERR_ARG is not "invalid argument" but a
little bit more, so the test thinks the output is wrong. So probably the test
has to be update to match the according error string of MPI_ERR_ARG.

Fixes trac:682

This commit was SVN r12913.

The following Trac tickets were found above:
  Ticket 682 --> https://svn.open-mpi.org/trac/ompi/ticket/682
2006-12-21 19:36:31 +00:00
Jelena Pjesivac-Grbovic
f1aec23507 Adding tuned allgather implementation.
It contains four algorithms: 
Bruck (ciel(logP) steps), Recursive Doubling (log(P) for power-of-2 processes), Ring (P-1 steps),
and Neighbor Exchange (P/2 steps for even number of processes).

All algorithms passed occ, IMB-2.3, and intel verification tests from ompi-tests/ for up to 56 processes.
The fixed decision function is based on results collected over MX on the Grig cluster at 
the University of Tennessee at Knoxville.  
I have also added (and commented out) copy of MPICH2 decision function for allgather
(from their IJHPCA 2005 paper).

This commit was SVN r12910.
2006-12-21 18:40:02 +00:00
Brian Barrett
7880353fcc Need to close every endpoint we open, or the MX progress thread doesn't die,
which can cause segfaults on shutdown.  Calling mx_finalize() isn't enough
to shutdown the thread, so must close endpoints as well.

Refs trac:513

This commit was SVN r12908.

The following Trac tickets were found above:
  Ticket 513 --> https://svn.open-mpi.org/trac/ompi/ticket/513
2006-12-21 18:13:22 +00:00
Galen Shipman
faa0bafa96 modify preconnect to use a rotating ring algorithm, OOB connections are
brought up lazily so we want to be a bit less agressive. 

This commit was SVN r12906.
2006-12-21 01:36:57 +00:00
Gleb Natapov
484c6a2c1a Use OPAL_ALIGN() macro to align length. Return address from mpool_alloc is now
properly aligned so no need to align it once more.

This commit was SVN r12899.
2006-12-19 08:34:48 +00:00
Brian Barrett
2ab65eb521 Remove some debugging output that was #if 0'ed out but shouldn't have been
committed into the trunk anyway

This commit was SVN r12897.
2006-12-19 02:34:41 +00:00
Gleb Natapov
b910d10a81 Add general functions for alignment and change rdma_mpool_align to always
honor an alignment event if posix_memalign() is not available.

This commit was SVN r12892.
2006-12-18 10:52:18 +00:00
Brian Barrett
c554638446 Support systems without malloc.h or posix_memalign (ie, pretty much every
one we support that isn't Linux)

This commit was SVN r12880.
2006-12-17 17:28:59 +00:00
Brian Barrett
b448b4e47e More heterogeneous fixes. Don't set reachability bit on a remote proc
if the remote architecture differs from the local architecture and the
btl doesn't support heterogeneous transport.

Refs trac:587

This commit was SVN r12879.

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2006-12-17 17:27:08 +00:00
Gleb Natapov
190e7a27cd Merge with gleb-mpool branch. All RDMA components use same mpool now (rdma).
udapl/openib/vapi/gm mpools a deprecated. rdma mpool has parameter that allows
to limit its size mpool_rdma_rcache_size_limit (default is 0 - unlimited).

This commit was SVN r12878.
2006-12-17 12:26:41 +00:00
Brian Barrett
f1fdd7c041 Handle case where remote process is of different architecture than the local
process when creating a datatype from an internal description.

Refs trac:640

This commit was SVN r12877.

The following Trac tickets were found above:
  Ticket 640 --> https://svn.open-mpi.org/trac/ompi/ticket/640
2006-12-17 04:39:16 +00:00
Brian Barrett
0653dc3f24 Pad headers to eliminate heterogeneous issues. Add conversion functions
for switching endianness of headers.  Galen is going to add the code to
use the endian stuff...

This commit was SVN r12876.
2006-12-17 00:50:59 +00:00
Brian Barrett
01e8fc5f91 Redo of r12871, without the preconnect code change:
Move the req_mtl structure back to the end of each of the structures in 
the CM PML. The req_mtl structure is cast into a mtl_*_request_structure 
for each MTL, which is larger than the req_mtl itself. The cast will cause
the *_request to overwrite parts of the heavy requests if the req_mtl
isn't the *LAST* thing on each structure (hence the comment). This was 
moved as an optimization at some point, which caused buffer sends to fail...

Refs trac:669

This commit was SVN r12873.

The following SVN revision numbers were found above:
  r12871 --> open-mpi/ompi@597598b712

The following Trac tickets were found above:
  Ticket 669 --> https://svn.open-mpi.org/trac/ompi/ticket/669
2006-12-15 17:54:14 +00:00
Brian Barrett
bdf0b231b2 Undo r12871, as it contained some code in ompi/runtime that shouldn't have been
committed

Refs trac:669

This commit was SVN r12872.

The following SVN revision numbers were found above:
  r12871 --> open-mpi/ompi@597598b712

The following Trac tickets were found above:
  Ticket 669 --> https://svn.open-mpi.org/trac/ompi/ticket/669
2006-12-15 17:52:13 +00:00
Brian Barrett
597598b712 Move the req_mtl structure back to the end of each of the structures in the
CM PML.  The req_mtl structure is cast into a mtl_*_request_structure for
each MTL, which is larger than the req_mtl itself.  The cast will cause
the *_request to overwrite parts of the heavy requests if the req_mtl
isn't the *LAST* thing on each structure (hence the comment).  This was
moved as an optimization at some point, which caused buffer sends to
fail...

Refs trac:669

This commit was SVN r12871.

The following Trac tickets were found above:
  Ticket 669 --> https://svn.open-mpi.org/trac/ompi/ticket/669
2006-12-15 17:46:53 +00:00
Rainer Keller
b99e5a71d1 - Help message in case of MPI-application with two init or
calling init functions after finalize.

This commit was SVN r12858.
2006-12-14 19:58:04 +00:00
Brad Benton
18da4c40d3 Set the QP's static rate from the associated MCA parameter, rather
than just defaulting to 0.

Fixes trac:675

This commit was SVN r12855.

The following Trac tickets were found above:
  Ticket 675 --> https://svn.open-mpi.org/trac/ompi/ticket/675
2006-12-14 19:42:24 +00:00
Brian Barrett
38c2e43ac2 Print out error string rather than errno for TCP-related errors, making it easier for both the user and us to debug issues with BTL and OOB issues...
This commit was SVN r12852.
2006-12-14 18:20:43 +00:00
Jeff Squyres
0ca8cb35b7 Fixes trac:366
Add ability for ini files to recognize "use_eager_rdma" flag.  Set the
default to "no" (because we should assume that HCAs cannot support the
property necessary for using RDMA for eager messages -- that the last
byte of the message is guaranteed to be written to memory last --
unless proven otherwise.  For example, iWARP cards apparently do not
provide this guarantee), and then set all Mellanox and IBM HCAs to
override the default to enable this behavior on these cards.

This commit was SVN r12851.

The following Trac tickets were found above:
  Ticket 366 --> https://svn.open-mpi.org/trac/ompi/ticket/366
2006-12-14 15:52:13 +00:00
Dan Lacher
e3f749acc4 Ticket: #673
Submitted by: Dan Lacher

This commit was SVN r12844.
2006-12-13 20:01:16 +00:00
George Bosilca
80bc0c8868 Allow the MX to survive if we are unable to connect to a peer. The PML will
try to find another route.

This commit was SVN r12837.
2006-12-13 01:12:07 +00:00
Mohamad Chaarawi
cae083dec6 replaced the old CID allocation algorithm with the blocked algorithm. The
impace in the communicator directory is still not great since the interface
for allocating a Cid has not changed..

This commit was SVN r12836.
2006-12-12 22:01:39 +00:00
Brian Barrett
10af8ab454 Corrections for when threading is enabled.
Refs trac:564

This commit was SVN r12830.

The following Trac tickets were found above:
  Ticket 564 --> https://svn.open-mpi.org/trac/ompi/ticket/564
2006-12-12 18:48:42 +00:00
Brad Benton
337116d5fd Added IBM eHCA vendor and part id info
This commit was SVN r12827.
2006-12-12 14:12:39 +00:00
Brian Barrett
cf196ce420 Instead of an unknown proc list that requires ownership transfer of data (which, in turn, requires a complex series of locks to be held during the transfer), use a modex backing store with backpointers from the proc to the backing store. The proc structures no longer own the modex data, which greatly simplifies locking when an unknown proc suddenly becomes known.
Refs trac:564

This commit was SVN r12822.

The following Trac tickets were found above:
  Ticket 564 --> https://svn.open-mpi.org/trac/ompi/ticket/564
2006-12-11 21:27:30 +00:00
Ralph Castain
0a5d41857a Complete next round of message size reduction: "strip" the descriptive info from the returned values. I have now added a flag to the gpr address mode (ORTE_GPR_STRIPPED) that instructs the gpr to not include segment names or tokens in the returned gpr_value_t objects.
I found only two places that were looking at the tokens:

1. the odls - we used the tokens to separately process the globals container data from everything else. In this case, I left the subscription that returned the globals data alone, but "stripped" the subscription that returned the launch data for the procs. These subscriptions have nothing to do with the xcast message.

2. the pml_base_modex - the callback function was getting process names from the returned tokens. Actually, this function was doing a very bad thing - it was assuming that the first token returned was *always* the process name. This is currently true, but is one of those assumptions that someone could have easily changed - and suddenly found the system inexplicably failing. I modified the function to (a) get the name sent back to us, (b) "stripped" the value structures of tokens and segment strings, and (c) correctly obtained process names from the returned values. I also reindented the heck out of the code so it was legible (at least, to my old eyes).

This commit was SVN r12813.
2006-12-09 23:10:25 +00:00
Jeff Squyres
e70ef98ea6 Update the help message to be a bit more specific and refer to the web
FAQ.

This commit was SVN r12812.
2006-12-09 15:13:03 +00:00
Jeff Squyres
c7282855e7 Fixes trac:659
This commit fixes several aspects regarding MPI conformance of requests.

 * Eliminate the last argument of ompi_errhandler_request_invoke(); we
   ''always'' want to invoke the back-end exception handler with the
   real error code.
 * Make it clear in comments that we only invoke the ''first''
   exception in a given array of requests, even if there's more than
   one request with a non-MPI_SUCCESS value for MPI_ERROR.
 * Defer the freeing of requests upon exception in the back-end
   functions to MPI_WAIT* and MPI_TEST* until later; the requests are
   kept so that we know what handler to invoke when we actually invoke
   the exception.  After figuring that out, ''then'' we free requests
   with pending exceptions on them.
 * Clean up return codes from the back-end MPI_TEST* and MPI_WAIT*
   functions.
 * Slightly modify ompi_errcode_get_mpi_code() to return unity if it
   receives an MPI error code (vs. an OMPI error code).

This commit was SVN r12810.

The following Trac tickets were found above:
  Ticket 659 --> https://svn.open-mpi.org/trac/ompi/ticket/659
2006-12-09 14:20:08 +00:00
Patrick Geoffray
58c6f8c8e1 Copyright update. Thanks to Jeff to remind me.
This commit was SVN r12803.
2006-12-07 23:55:00 +00:00
Patrick Geoffray
6e09b0c23f lval is not defined when pval is assigned on 32 bit systems. this
usually is ok on little-endian systems, as the upper 32 bits will likely
be ignored, but on 32-bit big-endian systems, lval is complete junk.
Use ival if 32 bit mode, lval if 64.

Mixing of 32 and 64 bit architectures won't work without more changes.

This commit was SVN r12802.
2006-12-07 23:34:04 +00:00
Brian Barrett
98884e45e4 Clean up the way procs are added to the global process list after MPI_INIT:
* Do not add new procs to the global list during modex callback or
    when sharing orte names during accept/connect.  For modex, we
    cache the modex info for later, in case that proc ever does get
    added to the global proc list.  For accept/connect orte name
    exchange between the roots, we only need the orte name, so no
    need to add a proc structure anyway.  The procs will be added
    to the global process list during the proc exchange later in 
    the wireup process
  * Rename proc_get_namebuf and proc_get_proclist to proc_pack
    and proc_unpack and extend them to include all information
    needed to build that proc struct on a remote node (which
    includes ORTE name, architecture, and hostname).  Change
    unpack to call pml_add_procs for the entire list of new
    procs at once, rather than one at a time.
  * Remove ompi_proc_find_and_add from the public proc
    interface and make it a private function.  This function
    would add a half-created proc to the global proc list, so
    making it harder to call is a good thing.

This means that there's only two ways to add new procs into the global proc list at this time: During MPI_INIT via the call to ompi_proc_init, where my job is added to the list and via ompi_proc_unpack using a buffer from a packed proc list sent to us by someone else.  Currently, this is enough to implement MPI semantics.  We can extend the interface more if we like, but that may require HNP communication to get the remote proc information and I wanted to avoid that if at all possible.

Refs trac:564

This commit was SVN r12798.

The following Trac tickets were found above:
  Ticket 564 --> https://svn.open-mpi.org/trac/ompi/ticket/564
2006-12-07 19:56:54 +00:00
Brian Barrett
b07dfa7841 * remove unused variable in ompi_comm_get_rprocs
* don't load data into a buffer until we have the data, as
    the data contains some header information needed to
    properly load the data

This commit was SVN r12792.
2006-12-07 16:19:44 +00:00