without this fix, an error handler invoked on pml_ucx request would
segfault while trying to dereference requests[i]->req_mpi_object.comm
(picked from master f36eeef)
Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
The feature of persistent collectives is approved in the Sept. 2018
MPI Forum meeting and 2018 Draft Specification of the MPI standard is
published during SC18.
Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
(cherry picked from commit 5f0fcf0f45)
* Needed to properly read PMIx job data like the following
- `OPAL_PMIX_LOCALLDR`
- `OPAL_PMIX_RANK`
- `OPAL_PMIX_GLOBAL_RANK`
- `OPAL_PMIX_APPLDR`
- `OPAL_PMIX_APP_RANK`
Signed-off-by: Joshua Hursey <jhursey@us.ibm.com>
(cherry picked from commit a557c4130c)
ompi/mpiext/cuda/c/mpiext_cuda_c.h is automatically generated from
ompi/mpiext/cuda/c/mpiext_cuda_c.h.in at configure time.
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
(cherry picked from commit open-mpi/ompi@f8318f0a8f)
(cherry picked from commit open-mpi/ompi@b3ce25af95)
Follow on to 430c659908: clarify the help message and fix one typo.
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
(cherry picked from commit e9bf318dcb)
Update the show_help message for when there are not enough slots to
run an application.
Also, remove a bunch of copies of this message in various show_help
text files that aren't used/referred to anywhere in the code.
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
(cherry picked from commit 430c659908)
Per feedback from https://github.com/open-mpi/ompi/pull/6028, remove
"+ob1" from the sentence to emphasize that it's only IB usage through
openib that is deprecated/superceded (i.e., ob1 is definitely not
deprecated).
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
(cherry picked from commit 6cb4159826)
Move the UCX and MXM text up to flow better with the rest of the
text+content. Also emphasize that MXM is deprecated.
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
(cherry picked from commit 4ec8e6fe22)
Several names are now no longer returned by MPI_Type_get_envelope.
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
(cherry picked from commit 65eb118e08)
It seems in some cases (gcc older than v6.0.0) the __atomic_thread_fence is a
no-op with __ATOMIC_ACQUIRE. This appears to be the case with X86_64 so go
ahead and use __ATOMIC_SEQ_CST for the x86_64 read memory barrier. This should
not cause any performance issues as it is equivalent to the memory barrier
in the hand-written atomics.
References #6014
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
(cherry picked from commit 30119ee339)
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
Commit 89da9651b inadvertantly #if'ed out both deprecated *and*
removed items from mpi.h. The intent was only to #if out items that
have been *removed* from the MPI specification and leave all items
that are merely deprecated.
This commit also re-orders the deleted typedef+functions to be in the
same order as they are listed in MPI-3.1 chapter 17, just to make
verifying/checking the code easier.
Note that --enable-mpi1-compatibility can still be used to restore
prototypes for the items that have been removed from the MPI
specification (e.g., MPI_Address()).
Signed-off-by: Geoffrey Paulsen <gpaulsen@us.ibm.com>
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
(cherry picked from commit b03a39d359)
Under certain circumstances, ibv_exp_query_device was
returning an error due to uninitialized fields in the
extended attributes struct.
Fixes: #5810Fixes: #5914
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
(cherry picked from commit 8126779a35)
- added <cr> to split API groups to simplify human processing
Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
(cherry picked from commit 6e78102089)
- added missing file to profile makefile
- constants SHMEM_CTX_* are shifted into public header
Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
(cherry picked from commit 4a3e83780c)
PR #5450 addresses MPI_IN_PLACE processing for basic collective algorithms.
But in conjunction with that, we need to check for MPI_IN_PLACE in tuned paths
as well before calling ompi_datatype_type_size() as otherwise we segfault.
MPI spec also stipulates to ignore sendcount and sendtype for Alltoall and
Allgatherv operations. So, extending the check to these algorithms as well.
Signed-off-by: Aravind Gopalakrishnan <Aravind.Gopalakrishnan@intel.com>
(cherry picked from commit 88d781056f)
mca_scoll_basic_alltoall() passed (pSync + 1) to barrier function, but
the value of _SHMEM_ALLTOALL_SYNC_SIZE is 1, which made the barrier
function use an invalid memory location. In particular, this location
was not initialized to _SHMEM_SYNC_VALUE, which broke the barrier
algorithm and it did not complete: One PE could read 0 from its peer and
assume the peer already started the barrier, and then write 1 to the
peer. Then, the peer entered the barrier and overwrote the 1 with 0, and
then it waited forever to see '1' in its pSync.
Found with shmem_verifier test suite.
(picked from master 6754bf1)
Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
Only default to the external component if its version is
greater or equal than the internal libevent (2.0.22)
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
(cherry picked from commit b205039205)
