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533 Коммитов

Автор SHA1 Сообщение Дата
Terry Dontje
266e663091 Add opal_tree class. This will be used in the future by sysinfo to store hw maps to be used by rmaps for the new affinity code.
This commit was SVN r24594.
2011-03-30 08:05:28 +00:00
Eugene Loh
2770a12beb Continue clean up of thread options started in r22841, 22842, and 22849.
No need for any CMRs to 1.5... that was already done in CMR 2728.

This commit was SVN r24545.

The following SVN revision numbers were found above:
  r22841 --> open-mpi/ompi@b400b84162
2011-03-18 21:36:35 +00:00
Ralph Castain
d5dfe05521 Remove stale code associated with OPAL_THREADS_HAVE_DIFFERENT_PIDS. In the past, we have supported the case of really, really old Linux kernels where threads have different pids. However, when we updated the event library, we didn't also update that support code. In addition, when we dropped progress thread support, we didn't remove areas of the code that could no longer be compiled (i.e., were protected by "if progress thread && if have different pids).
There was no compelling reason to support such old kernels. Accordingly, convert the test to print a nice error message indicating we no longer support old kernels (but indicate that earlier OMPI versions do) and error out. Remove all code that was protected by "if have different pids" since it can no longer be compiled.

This commit was SVN r24531.
2011-03-15 21:05:03 +00:00
Jeff Squyres
ddcbfa6af0 Fix some fairly-important typos (!)
This commit was SVN r24328.
2011-02-01 13:18:01 +00:00
Jeff Squyres
f015f885f6 Fix datatype variable names so that PGI builds stop failing in MTT.
This commit was SVN r24327.
2011-01-31 19:12:33 +00:00
George Bosilca
fc9133cc7f Correctly initialize the convertor to be used.
Don't forget to initialize the OPAL datatype module.

This commit was SVN r24279.
2011-01-20 20:05:21 +00:00
George Bosilca
29c7f2fba5 Update the tests to match the new datatype engine.
This commit was SVN r24252.
2011-01-14 07:58:50 +00:00
Shiqing Fan
f43862420c Convert the bad dos line endings to unix style for all windows related files.
This commit was SVN r24137.
2010-12-02 12:08:08 +00:00
Ralph Castain
86c7365e8e Clean up a few initialization issues - don't think these are impacting the shared memory situation as it didn't fix the problem.
Setup the event API to support multiple bases in preparation for splitting the OMPI and ORTE events. Holding here pending shared memory resolution.

This commit was SVN r23943.
2010-10-26 02:41:42 +00:00
Ralph Castain
fceabb2498 Update libevent to the 2.0 series, currently at 2.0.7rc. We will update to their final release when it becomes available. Currently known errors exist in unused portions of the libevent code. This revision passes the IBM test suite on a Linux machine and on a standalone Mac.
This is a fairly intrusive change, but outside of the moving of opal/event to opal/mca/event, the only changes involved (a) changing all calls to opal_event functions to reflect the new framework instead, and (b) ensuring that all opal_event_t objects are properly constructed since they are now true opal_objects.

Note: Shiqing has just returned from vacation and has not yet had a chance to complete the Windows integration. Thus, this commit almost certainly breaks Windows support on the trunk. However, I want this to have a chance to soak for as long as possible before I become less available a week from today (going to be at a class for 5 days, and thus will only be sparingly available) so we can find and fix any problems.

Biggest change is moving the libevent code from opal/event to a new opal/mca/event framework. This was done to make it much easier to update libevent in the future. New versions can be inserted as a new component and tested in parallel with the current version until validated, then we can remove the earlier version if we so choose. This is a statically built framework ala installdirs, so only one component will build at a time. There is no selection logic - the sole compiled component simply loads its function pointers into the opal_event struct.

I have gone thru the code base and converted all the libevent calls I could find. However, I cannot compile nor test every environment. It is therefore quite likely that errors remain in the system. Please keep an eye open for two things:

1. compile-time errors: these will be obvious as calls to the old functions (e.g., opal_evtimer_new) must be replaced by the new framework APIs (e.g., opal_event.evtimer_new)

2. run-time errors: these will likely show up as segfaults due to missing constructors on opal_event_t objects. It appears that it became a typical practice for people to "init" an opal_event_t by simply using memset to zero it out. This will no longer work - you must either OBJ_NEW or OBJ_CONSTRUCT an opal_event_t. I tried to catch these cases, but may have missed some. Believe me, you'll know when you hit it.

There is also the issue of the new libevent "no recursion" behavior. As I described on a recent email, we will have to discuss this and figure out what, if anything, we need to do.

This commit was SVN r23925.
2010-10-24 18:35:54 +00:00
Brad Benton
09c4f4d95c Added copyright notices for the files modified in r23669.
This commit was SVN r23687.

The following SVN revision numbers were found above:
  r23669 --> open-mpi/ompi@271cfa8c9a
2010-08-30 17:46:47 +00:00
Nysal Jan
271cfa8c9a Fix the the opal_path_nfs test for GPFS. Reported by Paul H. Hargrove
This commit was SVN r23669.
2010-08-26 10:10:16 +00:00
Jeff Squyres
c59743d7e3 Move the predefined gap test to ompi/debuggers (we already have the
dlopen_test there, so why not put the other debugger test there with
it?).

This commit was SVN r23527.
2010-07-28 16:22:10 +00:00
Jeff Squyres
49b8008986 Remove the peruse test from any possibility of being run during "make
check" (it's been deactivated for 2+ years now, anyway).  It needs to
be launched via "mpirun" and needs >= 2 processes, so it wasn't a good
candidate for "make check", anyway.

The test itself has moved to OMPI's internal testing suites.

This commit was SVN r23526.
2010-07-28 16:04:18 +00:00
Jeff Squyres
f5c3c2c0ac s/ompi/opal/gi in all of these files because they're really OPAL
tests, not OMPI tests.

This allows us to "make distcheck" with "./autogen.sh -no-ompi"
trees (i.e., these tests will now still work even if the OMPI layer is
not present -- because they're OPAL tests and we should treat them
that way).

This commit was SVN r23524.
2010-07-28 14:20:58 +00:00
Jeff Squyres
953e2ace35 s/ompi/opal/g throughout the file, because this is really an OPAL
test, not an OMPI test.

Also fix a case where if you haven't run "make install", then
opal_show_help_string() will (rightfully) return NULL.  So be sure to
handle that case and not segv.

This commit was SVN r23522.
2010-07-28 14:18:16 +00:00
Jeff Squyres
ce186723a7 * Only link in the top-most library that is necessary; it is no
longer necessary to link in libopen-rte if you link in libmpi (for
   example) because of the fact that libmpi now completely slurps in
   libopen-rte (ditto with libopen-rte and libopen-pal).
 * Only build ompi_rb_tree if we have the OMPI layer.

This commit was SVN r23521.
2010-07-28 14:17:08 +00:00
Jeff Squyres
a6915364e9 Only build this test if we've enabled the OMPI layer.
This commit was SVN r23520.
2010-07-28 14:14:22 +00:00
Jeff Squyres
a25d5ffbfc Er... make sure to close the comment.
This commit was SVN r23486.
2010-07-23 13:24:15 +00:00
Jeff Squyres
3241a6f414 This test currently only works on linux. Simply returning 77 from
everywhere and compiling the rest of the test out helps reduce some
MTT stderr chatter.

This commit was SVN r23485.
2010-07-23 13:15:24 +00:00
Jeff Squyres
7fa92d0f22 Fix a missed _count -> ucount update.
This commit was SVN r23479.
2010-07-23 01:06:16 +00:00
Jeff Squyres
c8bb7537e7 Remove include/opal/sys/cache.h -- its only purpose in life was to
#define CACHE_LINE_SIZE to 128.  This name has a conflict on NetBSD,
and it seems kinda odd to have a header file that ''only'' defines a
single value.  Also, we'll soon be raising hwloc to be a first-class
item, so having this file around seemed kinda weird.

Therefore, I replaced CACHE_LINE_SIZE with opal_cache_line_size, an
int (in opal/runtime/opal_init.c and opal/runtime/opal.h) on the
rationale that we can fill this in at runtime with hwloc info (trunk
and v1.5/beyond, only).  The only place we ''needed'' a compile-time
CACHE_LINE_SIZE was in the BTL SM (for struct padding), so I made a
new BTL_SM_ preprocessor macro with the old CACHE_LINE_SIZE value
(128).  That use isn't suitable for run-time hwloc information,
anyway.

This commit was SVN r23349.
2010-07-06 14:33:36 +00:00
Josh Hursey
77532c9f44 minor test fix, found my MTT
This commit was SVN r23176.
2010-05-19 17:02:13 +00:00
Abhishek Kulkarni
afbe3e99c6 * Wrap all the direct error-code checks of the form (OMPI_ERR_* == ret) with
(OMPI_ERR_* = OPAL_SOS_GET_ERR_CODE(ret)), since the return value could be a
 SOS-encoded error. The OPAL_SOS_GET_ERR_CODE() takes in a SOS error and returns
 back the native error code.

* Since OPAL_SUCCESS is preserved by SOS, also change all calls of the form
  (OPAL_ERROR == ret) to (OPAL_SUCCESS != ret). We thus avoid having to
  decode 'ret' to get the native error code.

This commit was SVN r23162.
2010-05-17 23:08:56 +00:00
Abhishek Kulkarni
4e33e6aeaa Merge OPAL SOS into the trunk.
The OPAL SOS framework tries to meet the following objectives:

 * reduce the cascading error messages and the amount of code needed to print an error message.
 * build and aggregate stacks of encountered errors and associate related individual errors with each other.
 * allow registration of custom callbacks to intercept error events.

For more information, refer to
https://svn.open-mpi.org/trac/ompi/wiki/ErrorMessages

This commit was SVN r23158.
2010-05-17 22:51:52 +00:00
Rainer Keller
8dd87def77 - Keep only the _LAST_ entry when reading in output from mount:
On Jaguar / is NFS-mounted over the initially mounted ROOTFS...

This commit was SVN r22662.
2010-02-18 18:05:55 +00:00
Rainer Keller
ecbd530a77 - Well well, that's what one gets when turning on all kinds of old
tests ;-)) Turn them off again, didn't have time to look into them
   Also, the test-program on eddie.osl.iu.edu, detects the rpc_pipefs
   mounted on /var/lib/nfs/rpc_pipefs, required for NFS.

This commit was SVN r22607.
2010-02-11 22:07:07 +00:00
Rainer Keller
ea4de16561 - Check whether file is opened on network file-system.
If file does not exist, check the directory it lives in...
   Maybe used by caller, trying to open mmap() on NFS, Lustre or
   Panasas (thanks Sam).
   For now, this is used to warn about the usage of mmap on such FS.

   Please note, that Ralph mentioned the orte_no_session_dir parameter.
   The help message includes a reference to this.

   Tested on NFS and Lustre on Linux on
     smoky: mpirun --mca orte_tmpdir_base $HOME/tmp -np 2 ./mpi_stub
     jaguar: mpirun ... --mca orte_tmpdir_base /tmp/work/$USER ...

   Fixes trac:1354

   This should   cmr:v1.5   once it has soaked and is shown to work on
   Solaris

This commit was SVN r22604.

The following Trac tickets were found above:
  Ticket 1354 --> https://svn.open-mpi.org/trac/ompi/ticket/1354
2010-02-10 23:18:29 +00:00
Rainer Keller
583bb42739 - Adapt for changed opal_init() arguments -- takes argc&argv
It's orte/constants.h not orte/orte_constants.h

This commit was SVN r22594.
2010-02-10 18:29:01 +00:00
Rainer Keller
c161cf5fa4 - These orte tests refer to include files not available anymore, call
functions not in the orte-tree, so disable for now.

This commit was SVN r22593.
2010-02-10 18:21:04 +00:00
Ralph Castain
30056c77cf Grrr...remove debug
This commit was SVN r22546.
2010-02-03 21:02:30 +00:00
Ralph Castain
1b5e4b4ac9 Update the opal_bitmap test
This commit was SVN r22545.
2010-02-03 20:56:48 +00:00
Shiqing Fan
872a4047ba Fix the bug that caused by ADD_DEPENDENCIES() from different version of CMake.
In CMake 2.6 and earlier, this function add dependencies for targets and also link the target libraries automatically, but in CMake 2.8,this behavior has been changed, i.e. it will only add the dependencies but no link, which will cause linking errors at compilation time.

This commit was SVN r22405.
2010-01-14 18:10:20 +00:00
Josh Hursey
0ba58cfcce One more argv/argc fix in tests
This commit was SVN r22270.
2009-12-07 14:40:38 +00:00
Jeff Squyres
a7ca4050b5 Doh! Missed these when adding &argc,&argv.
This commit was SVN r22261.
2009-12-04 02:30:34 +00:00
Brian Barrett
fd39f466ce Remove elements previously removed from the real structures...
This commit was SVN r22241.
2009-11-30 00:36:26 +00:00
Rainer Keller
63e540366b - Include the datatype tests again
make distcheck works
   contrib/dist/make_tarball succeeds too
   make checks shows all 5 tests passing.

This commit was SVN r22163.
2009-10-28 23:19:04 +00:00
Ralph Castain
214e26b539 Per Jeff (this work was done on a branch of mine, so I will do the commit):
Re-enable "./autogen.sh -no-ompi" again. If you -no-ompi, the entire OMPI
configury is skipped and the entire ompi/ subtree is not built. There's
some simple m4-isms that prune out the relevant parts.

I added ompi/config/, orte/config/, and opal/config/ directories. I moved a
bunch of m4 files from the top-level config/ dir into ompi/config/, and a few
into orte/config/.

Note that all 3 <project>/config directories have a config_files.m4 file. This
file contains the AC_CONFIG_FILES list for that project. The AC_CONFIG_FILES
call cannot be in an AC_DEFUN macro and conditionally called -- if it is
included at all, Autoconf will process it. Hence, these config_files.m4 files
don't AC_DEFUN -- they just have AC_CONFIG_FILES. m4_ifdef() is used to
conditionally include the files or not.

I moved a bunch of obvious OMPI-only m4 files from config/ to ompi/config/,
but I'm sure that there's more that could go. A ticket will be filed with
thoughts on future work in this area.

This commit was SVN r22113.
2009-10-20 23:44:20 +00:00
Ralph Castain
9b47a46ed9 Eliminate the datatype test until someone can fix it so that make_tarball can work
This commit was SVN r21933.
2009-09-03 16:40:05 +00:00
Rainer Keller
8e1b23779f - Replace combinations of
#if defined (c_plusplus)
          defined (__cplusplus)
   followed by
      extern "C" {
   and the closing counterpart by BEGIN_C_DECLS and END_C_DECLS.

   Notable exceptions are:
    - opal/include/opal_config_bottom.h:
      This is our generated code, that itself defines BEGIN_C_DECL and
      END_C_DECL
    - ompi/mpi/cxx/mpicxx.h:
      Here we do not include opal_config_bottom.h:                                 
    - Belongs to external code:                                                    
      opal/mca/backtrace/darwin/MoreBacktrace/MoreDebugging/MoreBacktrace.c        
      opal/mca/backtrace/darwin/MoreBacktrace/MoreDebugging/MoreBacktrace.h        
    - opal/include/opal/prefetch.h:
      Has C++ specific macros that are protected:                                  

    - Had #if ... } #endif  _and_ END_C_DECLS (aka end up with 2x
      END_C_DECLS)
      ompi/mca/btl/openib/btl_openib.h
    - opal/event/event.h has #ifdef __cplusplus as BEGIN_C_DECLS...
    - opal/win32/ompi_process.h: had extern "C"\n {...
      opal/win32/ompi_process.h: dito
    - ompi/mca/btl/pcie/btl_pcie_lex.l: needed to add *_C_DECLS
      ompi/mpi/f90/test/align_c.c: dito
    - ompi/debuggers/msgq_interface.h: used #ifdef __cplusplus
    - ompi/mpi/f90/xml/common-C.xsl: Amend

   Tested on linux using --with-openib and --with-mx

   The following do not contain either opal_config.h, orte_config.h or
   ompi_config.h
   (but possibly other header files, that include one of the above):
      ompi/mca/bml/r2/bml_r2_ft.h
      ompi/mca/btl/gm/btl_gm_endpoint.h
      ompi/mca/btl/gm/btl_gm_proc.h
      ompi/mca/btl/mx/btl_mx_endpoint.h
      ompi/mca/btl/ofud/btl_ofud_endpoint.h
      ompi/mca/btl/ofud/btl_ofud_frag.h
      ompi/mca/btl/ofud/btl_ofud_proc.h
      ompi/mca/btl/openib/btl_openib_mca.h
      ompi/mca/btl/portals/btl_portals_endpoint.h
      ompi/mca/btl/portals/btl_portals_frag.h
      ompi/mca/btl/sctp/btl_sctp_endpoint.h
      ompi/mca/btl/sctp/btl_sctp_proc.h
      ompi/mca/btl/tcp/btl_tcp_endpoint.h
      ompi/mca/btl/tcp/btl_tcp_ft.h
      ompi/mca/btl/tcp/btl_tcp_proc.h
      ompi/mca/btl/template/btl_template_endpoint.h
      ompi/mca/btl/template/btl_template_proc.h
      ompi/mca/btl/udapl/btl_udapl_eager_rdma.h
      ompi/mca/btl/udapl/btl_udapl_endpoint.h
      ompi/mca/btl/udapl/btl_udapl_mca.h
      ompi/mca/btl/udapl/btl_udapl_proc.h
      ompi/mca/mtl/mx/mtl_mx_endpoint.h
      ompi/mca/mtl/mx/mtl_mx.h
      ompi/mca/mtl/psm/mtl_psm_endpoint.h
      ompi/mca/mtl/psm/mtl_psm.h
      ompi/mca/pml/cm/pml_cm_component.h
      ompi/mca/pml/csum/pml_csum_comm.h
      ompi/mca/pml/dr/pml_dr_comm.h
      ompi/mca/pml/dr/pml_dr_component.h
      ompi/mca/pml/dr/pml_dr_endpoint.h
      ompi/mca/pml/dr/pml_dr_recvfrag.h
      ompi/mca/pml/example/pml_example.h
      ompi/mca/pml/ob1/pml_ob1_comm.h
      ompi/mca/pml/ob1/pml_ob1_component.h
      ompi/mca/pml/ob1/pml_ob1_endpoint.h
      ompi/mca/pml/ob1/pml_ob1_rdmafrag.h
      ompi/mca/pml/ob1/pml_ob1_recvfrag.h
      ompi/mca/pml/v/pml_v_output.h
      opal/include/opal/prefetch.h
      opal/mca/timer/aix/timer_aix.h
      opal/util/qsort.h
      test/support/components.h

This commit was SVN r21855.

The following SVN revision numbers were found above:
  r2 --> open-mpi/ompi@58fdc18855
2009-08-20 11:42:18 +00:00
Rainer Keller
ddaee48680 - Hmm, make check ran, but make distcheck did not know about opal_ddt_lib.c.
This commit was SVN r21665.
2009-07-14 14:45:55 +00:00
Rainer Keller
6c5532072a - Split the datatype engine into two parts: an MPI specific part in
OMPI
   and a language agnostic part in OPAL. The convertor is completely
   moved into OPAL.  This offers several benefits as described in RFC
   http://www.open-mpi.org/community/lists/devel/2009/07/6387.php
   namely:
    - Fewer basic types (int* and float* types, boolean and wchar
    - Fixing naming scheme to ompi-nomenclature.
    - Usability outside of the ompi-layer.
 - Due to the fixed nature of simple opal types, their information is
   completely
   known at compile time and therefore constified
 - With fewer datatypes (22), the actual sizes of bit-field types may be
   reduced
   from 64 to 32 bits, allowing reorganizing the opal_datatype
   structure, eliminating holes and keeping data required in convertor
   (upon send/recv) in one cacheline...
   This has implications to the convertor-datastructure and other parts
   of the code.
 - Several performance tests have been run, the netpipe latency does not
   change with
   this patch on Linux/x86-64 on the smoky cluster.
 - Extensive tests have been done to verify correctness (no new
   regressions) using:
   1. mpi_test_suite on linux/x86-64 using clean ompi-trunk and
    ompi-ddt:
    a. running both trunk and ompi-ddt resulted in no differences
       (except for MPI_SHORT_INT and MPI_TYPE_MIX_LB_UB do now run
       correctly).
    b. with --enable-memchecker and running under valgrind (one buglet
       when run with static found in test-suite, commited)
   2. ibm testsuite on linux/x86-64 using clean ompi-trunk and ompi-ddt:
      all passed (except for the dynamic/ tests failed!! as trunk/MTT)
   3. compilation and usage of HDF5 tests on Jaguar using PGI and
      PathScale compilers.
   4. compilation and usage on Scicortex.
 - Please note, that for the heterogeneous case, (-m32 compiled
   binaries/ompi), neither
   ompi-trunk, nor ompi-ddt branch would successfully launch.

This commit was SVN r21641.
2009-07-13 04:56:31 +00:00
Ralph Castain
f966d9f972 Fix visibility issues with opal_graph functions.
Fix the carto test so it can compile - need to update input file so it can run

This commit was SVN r21403.
2009-06-09 15:02:57 +00:00
Rainer Keller
fc65875542 - As in r21238, do not use printf %z for size_t...
This commit was SVN r21239.

The following SVN revision numbers were found above:
  r21238 --> open-mpi/ompi@b2f8095ba7
2009-05-14 14:11:31 +00:00
Greg Koenig
60485ff95f This is a very large change to rename several #define values from
OMPI_* to OPAL_*.  This allows opal layer to be used more independent
from the whole of ompi.

NOTE: 9 "svn mv" operations immediately follow this commit.

This commit was SVN r21180.
2009-05-06 20:11:28 +00:00
Rainer Keller
7663fb47f0 - In the included headers, the string.h is missing.
- For size_t, Posix offers %z length modifier, get rid
   of warning (or need to cast...)

This commit was SVN r21165.
2009-05-05 15:42:31 +00:00
Ralph Castain
e1673778be Replace missing headers
This commit was SVN r21136.
2009-05-01 15:09:10 +00:00
Jeff Squyres
80a1ae45ba Add missing header
This commit was SVN r21122.
2009-04-30 11:36:35 +00:00
Rainer Keller
221fb9dbca ... Delayed due to notifier commits earlier this day ...
- Delete unnecessary header files using
   contrib/check_unnecessary_headers.sh after applying
   patches, that include headers, being "lost" due to
   inclusion in one of the now deleted headers...

   In total 817 files are touched.
   In ompi/mpi/c/ header files are moved up into the actual c-file,
   where necessary (these are the only additional #include),
   otherwise it is only deletions of #include (apart from the above
   additions required due to notifier...)

 - To get different MCAs (OpenIB, TM, ALPS), an earlier version was
   successfully compiled (yesterday) on:
   Linux locally using intel-11, gcc-4.3.2 and gcc-SVN + warnings enabled
   Smoky cluster (x86-64 running Linux) using PGI-8.0.2 + warnings enabled
   Lens cluster (x86-64 running Linux) using Pathscale-3.2 + warnings enabled

This commit was SVN r21096.
2009-04-29 01:32:14 +00:00
Shiqing Fan
3d4e0472d6 Add windows support files into the tarball, including .windows, CMakeLists.txt files, and CMake modules. Thanks to Jeff for testing it on Linux.
This commit was SVN r21069.
2009-04-24 16:39:33 +00:00