via the visibility feature that is provided by some compilers.
Per default this feature is disabled, to enable it you need to
configure with --enable-visibility and obviously you need a compiler
with visibility support. Please refer to the wiki for more information.
https://svn.open-mpi.org/trac/ompi/wiki/Visibility
This commit was SVN r14582.
development trees since last year (had to wait for some intel tests to
run yesterday, so I finally took the time to finish this work):
* Improve MPI API argument checking by also checking for NULL values
(especially helps when invalid Fortran MPI handles are passed,
because the various MPI_*f2c functions are supposed to return an
"invalid" MPI handle [meaning NULL] when this happens). So now
OMPI will generate an MPI exception rather than a segv.
* Removed a few redundant DATATYPE_NULL checks.
* Also check for some other forms of "invalid" handles (e.g., already
been freed, etc.) in some cases. We could probably be a bit more
stringent in this regard if we really wanted to.
* Change MPI_Get_processor_name to zero out the string up to
MPI_MAX_PROCESSOR_NAME characters, because the MPI spec says that
the string must be at least that long. We were already passing
that length to gethostname(), anyway.
This commit was SVN r14100.
This merge adds Checkpoint/Restart support to Open MPI. The initial
frameworks and components support a LAM/MPI-like implementation.
This commit follows the risk assessment presented to the Open MPI core
development group on Feb. 22, 2007.
This commit closes trac:158
More details to follow.
This commit was SVN r14051.
The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
r13912
The following Trac tickets were found above:
Ticket 158 --> https://svn.open-mpi.org/trac/ompi/ticket/158
test, Sun's darray test, and an internal LANL test code. I would not
assume it will work properly on other codes, as I'm still not sure I
completely understand what the standard says this function is supposed to
do.
Refs trac:65
This commit was SVN r13967.
The following Trac tickets were found above:
Ticket 65 --> https://svn.open-mpi.org/trac/ompi/ticket/65
create a duplicate type, because any duplicate type lose the PREDEFINED flag.
An MPI_LB (respectively MPI_UB) without the PREDEFINED tag is useless, as it's
not the a marker anymore. The solution is to return the same pointer, but once
the reference count has been increased. In order for this to work, I allowed
the destruction to check for the reference count of an object before complaining
about destroying a predefined type.
This fixed ticket #317.
This commit was SVN r13942.
* Update exactly how we handle MPI exceptions, particularly with
respect to MPI-1 section 3.2.5, and how error handlers are only
invoked for the ''first'' request that generates an exception.
* Update the "see also" section to be consistent across all 8
MPI_Test* and MPI_Wait* functions.
* Fixes trac:560
This commit was SVN r13619.
The following Trac tickets were found above:
Ticket 560 --> https://svn.open-mpi.org/trac/ompi/ticket/560
The C++ bindings were not tracking keyvals properly -- they were
freeing some internal meta data when Free_keyval() was called, not
when the keyval was actually destroyed (keyvals are refcounted in the
C layer, just like all other MPI objects, because they can live for
long after their corresponding Free call is invoked). This commit
fixes this problem and several other things:
* Add infrastructure on the ompi_attribute_keyval_t for an "extra"
destructor pointer that will be invoked during the "real"
constructor (i.e., when OBJ_RELEASE puts the refcount to 0). This
allows calling back into the C++ layer to release meta data
associated with the keyval.
* Adjust all cases where keyvals are created to pass in relevant
destructors (NULL or the C++ destructor).
* Do essentially the same for MPI::Comm, MPI::Win, and MPI:Datatype:
* Move several functions out of the .cc file into the _inln.h file
since they no longer require locks
* Make the 4 Create_keyval() functions call a common back-end
keyval creation function that does the Right Thing depending on
whether C or C++ function pointers were used for the keyval
functions. The back-end function does not call the corresponding
C MPI_*_create_keyval function, but rather does the work itself
so that it can associate a "destructor" callback for the C++
bindings for when the keyval is actually destroyed.
* Change a few type names to be more indicative of what they are
(mostly dealing with keyvals [not "keys"]).
* Add the 3 missing bindings for MPI::Comm::Create_keyval().
* Remove MPI::Comm::comm_map (and associated types) because it's no
longer necessary in the intercepts -- it was a by-product of being
a portable C++ bindings layer. Now we can just query the C layer
directly to figure out what type a communicator is. This solves
some logistics / callback issues, too.
* Rename several types, variables, and fix many comments in the
back-end C attribute implementation to make the names really
reflect what they are (keyvals vs. attributes). The previous names
heavily overloaded the name "key" and were ''extremely''
confusing.
This commit was SVN r13565.
The following Trac tickets were found above:
Ticket 817 --> https://svn.open-mpi.org/trac/ompi/ticket/817
a protection against creating subarrays with MPI_LB and MPI_UB. But, I don't
think the MPI standard state anything about this.
This commit was SVN r13504.
not being able to take C function pointers for either of the
copy or the delete fn. Fix by overloading the Create_keyval methods.
Fix trac #737, #738. Reviewed by jsquyres.
* A couple of cxx tests in ompi-tests (winkeyval.cc & typekeyval.cc)
will be re-enabled to regression test for this fix.
This commit was SVN r13391.
Found another places that we were incorrectly casting a C++ MPI handle
array to the corresponding C array type and hoping for the best (which
won't work at all). This commit fixes things so that we now do the
proper conversion between C<-->C++ handles.
This commit was SVN r13346.
configured with --disable-mpi-cxx so that the default -I flags in the
wrapper compilers don't point to a directory that doesn't exist.
Thanks to Martin Audet for identifying the problem.
This commit was SVN r13296.
return the buffer address from Fortran. It is not expected
behavior. For MPI_Buffer_attach, adjust the address of
the buffer handed in so it is always aligned.
Refs trac:750
Buffer detach reviewed by Jeff Squyres
Buffer attach alignment reviewed by George Bosilca
This commit was SVN r13205.
The following Trac tickets were found above:
Ticket 750 --> https://svn.open-mpi.org/trac/ompi/ticket/750
to the F90 binding for MPI_INITIALIZED was wrong (should have been
logical, not integer).
Fixes trac:782.
This commit was SVN r13170.
The following Trac tickets were found above:
Ticket 782 --> https://svn.open-mpi.org/trac/ompi/ticket/782
MPI_Aint. On 64-bit big endian machines, these can have some unpleasent
issues.
Refs trac:734
This commit was SVN r13140.
The following Trac tickets were found above:
Ticket 734 --> https://svn.open-mpi.org/trac/ompi/ticket/734
The 2nd parameter in MPI_WIN_CREATE is actually an address integer,
not a regular integer. The F77 prototype for this function was wrong,
causing Bad Things on some 64 bit platforms (on other 64 bit
platforms, we just got lucky).
This commit was SVN r13133.
The following Trac tickets were found above:
Ticket 732 --> https://svn.open-mpi.org/trac/ompi/ticket/732
to pass some of the tests provided by Sun. These will, of course, greatly
slow down calls to MPI_ACCUMULATE, but there's no way to pass the test
suite without them :/.
Refs trac:760
This commit was SVN r13117.
The following Trac tickets were found above:
Ticket 760 --> https://svn.open-mpi.org/trac/ompi/ticket/760
corrected in the MPI 2.0 errata.
* initialized some variables to make our sensitive sun compiler not to
not warn about them when user apps are compiling.
This commit was SVN r13058.
that a) STATUS[ES]_IGNORE *is* NULL, and b) ROMIO blindly sends its
status through to STATUS_SET_ELEMENTS, even if the status is IGNORE.
So we have some legal cases where IGNORE can be passed through here.
Well, that's what we get for trying to do good error checking. :-(
This commit was SVN r12999.
- Fix some fpritnf's in ompi_mpi_abort() that incorrectly assumed that
we were always being invoked from MPI_ABORT (ompi_mpi_abort() may be
invoked from a bunch of different places)
- Also try to opal_backtrace_print() if opal_bactrace_buffer() is not
supported.
- Print a message in MPI_ABORT if we're aborting.
This commit was SVN r12998.
the value of __n holds. This is not a problem in the first case
because sizeof(int) == sizeof(MPI_Flogical), so no alloc is actually
performed (which is most compilers, and why we haven't been bitten by
this yet). But the second case -- where sizeof(int) !=
sizeof(MPI_Flogical) -- is definitely a problem and needs the "+1" in
the alloc, or Bad Things will happen.
This commit was SVN r12953.
The following SVN revision numbers were found above:
r12712 --> open-mpi/ompi@3e11c76d4c
* Added Create_errhandler for MPI::File
* Make errors_throw_exceptions a first-class predefined exception
handler, and make it work for Comm, File, and Win
* Deal with error handlers and attributes for Files, Types, and Wins
like we do with Comms - can't just cast the callbacks from C++
signatures to C signatures. Callbacks will then fire with the
C object, not the C++ object. That's bad.
Refs trac:455
This commit was SVN r12945.
The following Trac tickets were found above:
Ticket 455 --> https://svn.open-mpi.org/trac/ompi/ticket/455
add_error_class and add_error_code files. Also fixed the update of the
lastusedcode attribute, all of work according to my tests pretty fine.
Please note: the testcode attached to the bug 683 still reports some bugs. I
am however pretty sure that the testcode is wrong at that points:
- the standard says that the attribute MPI_LASTUSEDCODE has to be updated for
a new error_class or a new error_code. The test currently assumes, that only
the add_error_code call changes the attribute value.
- you have to comment out the two lines 73 and 74 in order to make the
test finish, since these lines check for the error string of non-existent
codes.
- line 126 the error-string of MPI_ERR_ARG is not "invalid argument" but a
little bit more, so the test thinks the output is wrong. So probably the test
has to be update to match the according error string of MPI_ERR_ARG.
Fixes trac:682
This commit was SVN r12913.
The following Trac tickets were found above:
Ticket 682 --> https://svn.open-mpi.org/trac/ompi/ticket/682
This commit fixes several aspects regarding MPI conformance of requests.
* Eliminate the last argument of ompi_errhandler_request_invoke(); we
''always'' want to invoke the back-end exception handler with the
real error code.
* Make it clear in comments that we only invoke the ''first''
exception in a given array of requests, even if there's more than
one request with a non-MPI_SUCCESS value for MPI_ERROR.
* Defer the freeing of requests upon exception in the back-end
functions to MPI_WAIT* and MPI_TEST* until later; the requests are
kept so that we know what handler to invoke when we actually invoke
the exception. After figuring that out, ''then'' we free requests
with pending exceptions on them.
* Clean up return codes from the back-end MPI_TEST* and MPI_WAIT*
functions.
* Slightly modify ompi_errcode_get_mpi_code() to return unity if it
receives an MPI error code (vs. an OMPI error code).
This commit was SVN r12810.
The following Trac tickets were found above:
Ticket 659 --> https://svn.open-mpi.org/trac/ompi/ticket/659
- we have to be able to attach a string to an error class, not just to an
error code
- according to MPI-2 the attribute MPI_LASTUSEDCODE has to be updated
everytime you add a new code or a new class. Thus, you have to have single
list for both.
Thus, we got rid of the error_class structure. In the error-code structure, we
can distinguish whether we are dealing with an error code or an error class by
looking at the err->code element of the structure. In case its value is
MPI_UNDEFINED, the according entry is a class, else it is an error code. All
predefined error codes have the code and the class field set to the same
value.
The test MPI_Add_error_class1 passes now.
Fixes trac:418
This commit was SVN r12764.
The following Trac tickets were found above:
Ticket 418 --> https://svn.open-mpi.org/trac/ompi/ticket/418
* Always invoke the error handler on MPI_COMM_WORLD for
invalid windows (except in win_create, which should
instead be on the given communicator).
* Allow get_errhandler in addition to set_errhandler
on MPI_WIN_NULL
Refs trac:647
This commit was SVN r12718.
The following Trac tickets were found above:
Ticket 647 --> https://svn.open-mpi.org/trac/ompi/ticket/647
OMPI_ARRAY_INT_2_LOGICAL had an array bounds error - fixed this and the
analogous error in OMPI_ARRAY_LOGICAL_2_INT.
This commit was SVN r12712.
The following Trac tickets were found above:
Ticket 482 --> https://svn.open-mpi.org/trac/ompi/ticket/482
case where sizeof(INTEGER) > sizeof(int).
This commit was SVN r12707.
The following SVN revision numbers were found above:
r12684 --> open-mpi/ompi@e2c605f32a
* use one-sided datatype check instead of send/receive and check both
the origin and target datatypes
* allow error handler to be set on MPI_WIN_NULL, per standard
* Allow recursive calls into the pt2pt osc component's progress
function
* Fix an uninitialized variable problem in the unlock header
This commit was SVN r12667.
Ensure that the new predefined MPI-2 attribute callback functions take
the proper types (INTEGER, kind=MPI_ADDRESS_KIND instead of just
INTEGER).
This commit was SVN r12639.
The following Trac tickets were found above:
Ticket 624 --> https://svn.open-mpi.org/trac/ompi/ticket/624
(all versions up to and including 20060925). The issue has been
reported to Intel, along with a small [non-MPI] test program that
reproduces the problem (the test program and the OMPI C++ bindings
work fine with Intel C++ 9.0 and many other C++ compilers).
In short, a static initializer for a global variable (i.e., its
constructor is fired before main()) that takes as an argument a
reference to a typedef'd type will simply get the wrong value in the
argument. Specifically:
{{{
namespace MPI {
Intracomm COMM_WORLD(MPI_COMM_WORLD);
}
}}}
The constructor for MPI::Intracomm should get the value of
&ompi_mpi_comm_world. It does not; it seems to get a random value.
As mandated by MPI-2, annex B.13.4, for C/C++ interoperability, the
prototype for this constructor is:
{{{
class Intracomm {
public:
Intracomm(const MPI_Comm& data);
};
}}}
Experiments with icpc 9.1/20060925 have shown that removing the
reference from the prototype makes it work (!). After lots of
discussions about this issue with a C++ expert (Doug Gregor from IU),
we decided the following (cut-n-paste from an e-mail):
-----
> So here's my question: given that OMPI's MPI_<CLASS> types are all
> pointers, is there any legal MPI program that adheres to the above
> bindings that would fail to compile or work properly if we simply
> removed the "&" from the second binding, above?
I don't know of any way that a program could detect this change. FWIW,
the C++ committee has agreed that implementation of the C++ standard
library are allowed to decide arbitrarily between const& and by-value.
If they don't care, MPI users won't care.
When you remove the '&', I suggest also removing the "const". It is
redundant, but can trigger some strange name mangling in Sun's C++
compiler.
-----
So with this change:
* we now work again with the Intel 9.1 compiler
* our C++ bindings do not exactly conform to the MPI-2 spec, but
valid/legal MPI C++ apps cannot tell the difference (i.e., the
functionality is the same)
This commit was SVN r12514.
* Add MPI::Status methods Set_elements() and Set_cancelled()
* Added a bunch of comments in various places in the MPI C++ bindings
implementatio just to explain what's going on (because C++ can hide
a lot from you)
* Insert C++ callbacks for the MPI_Grequest callback functions
registered by MPI::Grequest::Start(). These callbacks keep a
little meta-data (created by Grequest::Start()) that allow the
proper callback signatures from C (i.e., from ompi_grequest_<foo>()
in libmpi.a -- C code), translate arguments as required, and then
invoke the callbacks with proper C++ signatures (i.e., call
user-defined callbacks with C++ function signatures).
This commit was SVN r12446.
The following Trac tickets were found above:
Ticket 580 --> https://svn.open-mpi.org/trac/ompi/ticket/580
size of the complex type as determined by configure; not the size of
the next larger complex type (i.e., a complex*N is 2 real*(N/2)'s, not
2 real*N's).
This commit was SVN r12421.
* Add some more error checking to GREQUEST_START
* Move the error checking in GREQUEST_COMPLETE up to inside the
MPI_PARAM_CHECK block, where it belongs
* Invoke the gen request query_fn in all the Right spots (per MPI-2:8.2)
* Distinguish between grequests created from C and Fortran
* Use the OBJ system to reference count to release the grequest at
the Right time and invoke the grequest free_fn properly (see
lengthy comment in grequest.c above the destructor)
* Have ompi_grequest_complete() call ompi_request_complete() rather
than [poorly] copy the contents of ompi_request_complete()
* Fix Fortran function callback pointer typedefs to use proper
Fortran types
* Edit ompi_request_test* and ompi_request_wait* to properly handle
generalized requests. This adds an "if" statement in the critical
path for all the back-end test* and wait* functions :-(,
but fortunately George took out two "if" statements from the
critical path last week. So we're still ahead. :-)
* Move ompi_request_test() out of request.h and into request.c (all
other test* and wait* functions were already in the .c file -- and
ompi_request_test() was too long to be statically inlined anyway)
This commit was SVN r12402.
The following Trac tickets were found above:
Ticket 496 --> https://svn.open-mpi.org/trac/ompi/ticket/496
Had group discussion about this on the weekly call. The decision was
that we should pass the real error code to the back-end exception
handler because it's pretty useless to pass MPI_ERR_IN_STATUS to the
back-end exception handler (because exception handlers don't have
access to the request or the status - this has potential issues for
fault tolerance kinds of scenarios). So in TESTALL, TESTSOME,
WAITALL, and WAITSOME, we examine the error code and if it's not
MPI_SUCCESS, return MPI_ERR_IN_STATUS.
This commit was SVN r12389.
The following Trac tickets were found above:
Ticket 549 --> https://svn.open-mpi.org/trac/ompi/ticket/549
Have no idea why this function always returns a failure. It should
always return SUCCESS (provided the status is value).
This commit was SVN r12364.
The following Trac tickets were found above:
Ticket 496 --> https://svn.open-mpi.org/trac/ompi/ticket/496
* For MPI_TEST, MPI_TESTANY, MPI_WAIT, and MPI_WAITANY (i.e., the
TEST/WAIT functions that return up to exactly one completed
request), return the actual error code.
* For MPI_TESTALL, MPI_TESTSOME, MPI_WAITALL, MPI_WAITSOME, (i.e.,
the TEST/WAIT functions that can return more than one completed
request), return MPI_ERR_IN_STATUS.
This commit was SVN r12355.
The following Trac tickets were found above:
Ticket 549 --> https://svn.open-mpi.org/trac/ompi/ticket/549
This commit essentially caches the invoking comm/win/file on the
ompi_request_t. This, paired with the req_type field, allows us to
retrieve the invoking MPI object and invoke the proper errhandler.
The patch is missing most updates for the MPI-2 one-sided stuff (i.e.,
the patch mainly fixes comms and files); I didn't really understand
that code and didn't want to hazard trying to figure it out when Brian
can probably do it much more quickly.
So #250 will still stay open, pending MPI-2 one-sided updates for this
stuff.
This commit was SVN r12339.
The following Trac tickets were found above:
Ticket 250 --> https://svn.open-mpi.org/trac/ompi/ticket/250
* Create a new request type: NOOP (described below)
* For all MPI_*_INIT functions, OBJ_NEW an ompi_request_t and set its
type to NOOP
* Ensure that the NOOP requests are OBJ_RELEASE'd when they are done
* MPI_START looks at the request type; if NOOP, just return success. If
not, call the PML start() function
* MPI_STARTALL always pass the entire array of requests back to the PML
(see next point)
* Make the PMLs only process PML requests (i.e., ignore/skip anything
that isn't of type PML -- such as the NOOP requests)
* Add a little more param error checking in STARTALL
This commit was SVN r12338.
The following Trac tickets were found above:
Ticket 529 --> https://svn.open-mpi.org/trac/ompi/ticket/529
allocation logic is completely done outside the data-type engine (in the PML) there is
no need for any special case inside the data-type engine. There is less arguments for
the ompi_convertor_pack and ompi_convertor_unpack as well (the last field free_after is
not required anymore as there is no memory allocated in the engine itself). This change
affect all components using datatypes. I test most of them, but it might happens that I
miss some ... If it's the case please let me know (don't shoot the pianist!!).
This commit was SVN r12331.
all platforms. The only exceptions (and I will not deal with them
anytime soon) are on Windows:
- the write functions which require the length to be an int when it's
a size_t on all UNIX variants.
- all iovec manipulation functions where the iov_len is again an int
when it's a size_t on most of the UNIXes.
As these only happens on Windows, so I think we're set for now :)
This commit was SVN r12215.
size and diplacement of data-type. After this patch all data can contain size_t bytes
and the displacements are defined as ptrdiff_t. All of the files I was able to compile
have been modified to match this requirement.
This commit was SVN r12146.
* Update comments in some MPI_FILE_* functions to reflect that the
MPI specs have different page numbers in the ps and pdf (woof!).
* Update comments to say "Retain" where we meant retain (not "return)
* Add a check in MPI_ERRHANDLER_FREE to raise an MPI exception if the
user attempts to free an intrinsic errhandler *and* the refcount is
1 (meaning that it would actually free the intrinsic). This
protects erroneous programs from segv'ing.
* Remove lengthy comment from comm_get_errhandler.c which is no
longer valid (because of the MPI-2 errata that says that users *do*
have to call MPI_ERRHANDLER_FREE).
This commit was SVN r12128.
The following SVN revision numbers were found above:
r12122 --> open-mpi/ompi@407b3cb788
The following Trac tickets were found above:
Ticket 502 --> https://svn.open-mpi.org/trac/ompi/ticket/502
MPI::SEEK_* because iostreams (well, ios_base, but I don't think that
should be included directly) can use SEEK_* as values in an enum, which
means that 'const int' is bad for them.
* Remove now useless comments in the cxx example programs
* include iostream after mpi.h so that our examples work with other MPI
implementations that don't try to be as friendly with the constants.
Refs trac:387
This commit was SVN r12125.
The following Trac tickets were found above:
Ticket 387 --> https://svn.open-mpi.org/trac/ompi/ticket/387
* Fix MPI-2 page number in comments for a specific reference in the
spec
* Allow getting/setting the errhandler on MPI_FILE_NULL
* Allow freeing of intrinsic errhandlers, per MPI-2 errata (if you GET
an errhandler on a communicator, you must be able to FREE it, even
if it's an intrinsic).
Thanks to Lisandro Dalcin for reporting these problems.
This commit was SVN r12122.
some issues with the C #defines SEEK_{SET, END, POS}. The workaround
involves some hackery that should work in almost every common use case
for the C stdio constants (and all the legal issues of the MPI constants).
The one issue is that the C stdio constants are now const ints instead
of #defines, which means that #ifdef checks will fail for the constants.
Behavior can be disabled at either configure time or build time.
Refs trac:387
This commit was SVN r12121.
The following Trac tickets were found above:
Ticket 387 --> https://svn.open-mpi.org/trac/ompi/ticket/387
