ports/openmpi
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Ralph Castain
63a23f1f90 Get the event lib built correctly - missing the OMPI-specific pieces from Makefile.am! 
Copmlete the symbol renaming to cover new symbols in the updated version.

This commit was SVN r26486.
 2012-05-24 00:27:41 +00:00
Ralph Castain
1d41c6bb80 Some more libevent configure fixes. Ensure -levent gets added to the wrapper flags as the LANL machines can't seem to find it otherwise. Remove the duplicate evaluation of --visibility in the libevent area as it was already done by opal for everyone. Set some more ignores. 
This commit was SVN r26485.
 2012-05-23 21:26:54 +00:00
Ralph Castain
31beff6362 Oops - if we don't want the Java bindings, then we really shouldn't be building them :-/ 
Also ensure we don't try to build them if no Java support was found, and error out if the user requests the bindings and we didn't find Java support.

Add a configure flag to skip the Java tests and just force-set the Java support to "disabled"

This commit was SVN r26484.
 2012-05-23 19:51:27 +00:00
Ralph Castain
88d5e6f2b4 Update ignores 
This commit was SVN r26483.
 2012-05-23 18:42:31 +00:00
Ralph Castain
5821e63e27 Remove built files and update ignores 
This commit was SVN r26482.
 2012-05-23 18:17:29 +00:00
Ralph Castain
8a2ca3d96f Delete built files 
This commit was SVN r26481.
 2012-05-23 18:14:26 +00:00
Ralph Castain
7fb49b1559 Silence warning 
This commit was SVN r26480.
 2012-05-23 13:59:41 +00:00
Ralph Castain
da28a4b0e6 Silence warning 
This commit was SVN r26479.
 2012-05-23 13:59:22 +00:00
Jeff Squyres
7969faf372 Fixes trac:3057: minor update to the man page to state that slot locations 
in rankfiles use ''physical'' device indexes (vs. logical indexes).

This commit was SVN r26478.

The following Trac tickets were found above:
  Ticket 3057 --> https://svn.open-mpi.org/trac/ompi/ticket/3057
 2012-05-23 11:43:33 +00:00
Matthias Jurenz
54d67f3957 Changes to VT: 
- corrected Fortran MPI lib. name for OMPI 1.7 (-lmpi_f77 -> -lmpi_mpifh)

This commit was SVN r26477.
 2012-05-23 09:06:22 +00:00
Matthias Jurenz
bf7e00b787 - corrected underlying compiler command for mpifort-vt (@FC@ -> vtf90) 
- removed useless mpi<f77|f90>-vt-wrapper-data.txt

This commit was SVN r26474.
 2012-05-23 08:55:00 +00:00
Jeff Squyres
5d878f0644 Update svn:ignore 
This commit was SVN r26473.
 2012-05-23 00:10:06 +00:00
Nathan Hjelm
b9959a95cd ack! one more 
This commit was SVN r26472.
 2012-05-22 20:52:52 +00:00
Nathan Hjelm
f2d4e95429 doh! add missing include 
This commit was SVN r26471.
 2012-05-22 20:49:13 +00:00
Nathan Hjelm
cdc3c87ba6 move pmi init/finalize into a common component 
This commit was SVN r26470.
 2012-05-22 15:15:39 +00:00
Nathan Hjelm
78b8b3cf76 bug fix: actually close ess components 
This commit was SVN r26469.
 2012-05-22 15:09:18 +00:00
Ralph Castain
b217124bd8 Symlink instead of copy 
This commit was SVN r26464.
 2012-05-21 23:07:48 +00:00
Ralph Castain
da3873af6f Rename the mapreduce tool to "mr+" per the marketing types 
This commit was SVN r26463.
 2012-05-21 21:17:44 +00:00
Nathan Hjelm
6eeca66475 add an option to enable static ports. diabled by default 
This commit was SVN r26462.
 2012-05-21 19:56:15 +00:00
George Bosilca
e890a8379b Various minor cleanups. 
This commit was SVN r26461.
 2012-05-21 13:15:24 +00:00
Ralph Castain
11d5a31b1e Update ignores, remove build result file from repo 
This commit was SVN r26460.
 2012-05-21 00:59:04 +00:00
Ralph Castain
40317c0290 Remove the old event lib version - new one seems to be working just fine. 
This commit was SVN r26459.
 2012-05-21 00:57:47 +00:00
Brian Barrett
25693363e9 * Fix internal accounting error regarding number of available credits 
* Use a single MD covering all of address space for put transfers, rather
 than a per-send MD.

This commit was SVN r26458.
 2012-05-20 23:42:26 +00:00
Ralph Castain
83d69b6c95 Enable the ORTE progress thread for apps (not needed in the tools as they already continuously loop in the event lib). This appears to be working, at least for MPI apps that only use shared memory (a simple "hello"). More testing is required to identify where problems will occur - this is only intended to allow further development. 
In order to use the progress thread, you must configure with:

--enable-orte-progress-threads --enable-event-thread-support

This commit was SVN r26457.
 2012-05-20 15:14:43 +00:00
Ralph Castain
c4f8043064 Per Nathan, with a little cleanup by me: update the PMI support to aggregate modex info, thus reducing the number of keys required so it fits within Cray default constraints 
This commit was SVN r26456.
 2012-05-19 16:12:52 +00:00
Ralph Castain
1ce59d08b5 Continue cleaning up the libevent ignores 
This commit was SVN r26455.
 2012-05-19 16:11:24 +00:00
Ralph Castain
a526afae92 Ensure we always cleanup local procs, no matter how we exited. 
This commit was SVN r26454.
 2012-05-18 23:37:40 +00:00
Ralph Castain
12ebc0e269 Don't need this to be a bin program as the class is captured in the jar 
This commit was SVN r26453.
 2012-05-18 23:37:18 +00:00
Ralph Castain
6d6faca871 Add ignores 
This commit was SVN r26452.
 2012-05-18 22:42:16 +00:00
Vishwanath Venkatesan
8d4bb65bd4 Modifying the explicit operations to make it absolute 
This commit was SVN r26451.
 2012-05-18 21:43:34 +00:00
Vishwanath Venkatesan
cbad31cc88 1. Freeing the displs array after allgatherv to avoid segmentation faults in dynamic segmentation 
2. Checking for 0 bytes datatypes  and sending only when data available to avoid 0 byte messages being sent and received. 
3. Changing timing extraction to support calculating, min, max and avg communication costs + min and avg write costs

This commit was SVN r26450.
 2012-05-18 21:39:58 +00:00
Ralph Castain
b16e43f489 Silence a warning on Mac 
This commit was SVN r26449.
 2012-05-18 15:27:04 +00:00
Ralph Castain
ca1b325738 Tweak the java setup so it works better on Mac. Only build mapreduce and allocators if hadoop support was requested. 
This commit was SVN r26448.
 2012-05-18 01:02:01 +00:00
Rolf vandeVaart
f8ace21366 Rename a few things for clarity. Add a stream. 
This commit was SVN r26447.
 2012-05-17 18:10:59 +00:00
Jeff Squyres
5fb48bafda Fixes trac:3093: when cleaning up, only reset items in the 
ompi_mpi_errcodes array to NULL if the index is not MPI_UNDEFINED.
Thanks to Alexey Bayduraev for the patch.

This commit was SVN r26446.

The following Trac tickets were found above:
  Ticket 3093 --> https://svn.open-mpi.org/trac/ompi/ticket/3093
 2012-05-16 15:26:32 +00:00
Jeff Squyres
cab31eafce Revert r26413: it was causing too much confusion. When an MPI proc 
exits with status 77, the whole job will be killed, but mpirun will
still return an exit status of 77, so MTT will report it as a skip
anyway. 

This commit was SVN r26445.

The following SVN revision numbers were found above:
  r26413 --> open-mpi/ompi@02aa36f2e5
 2012-05-16 14:45:58 +00:00
Jeff Squyres
2cf8b874d5 Oops -- forgot to include file_get_position_shared in r26439. 
This commit was SVN r26442.

The following SVN revision numbers were found above:
  r26439 --> open-mpi/ompi@d74795b299
 2012-05-15 19:51:15 +00:00
Jeff Squyres
dab7d36a81 Fix location of the default hostfile. Thanks to Götz Waschk for 
identifying the problem.

This commit was SVN r26441.
 2012-05-15 16:13:39 +00:00
Rolf vandeVaart
c228bd2311 Fix broken compile. Keep in sync with sm btl. 
This commit was SVN r26440.
 2012-05-15 15:32:33 +00:00
Jeff Squyres
d74795b299 Fix #3094: do the correct cast for the right integer size. 
This commit was SVN r26439.
 2012-05-15 15:15:33 +00:00
Jeff Squyres
8c209ca32a Oops -- Tiger is 10.4, not 10.3. 
This commit was SVN r26435.
 2012-05-14 14:12:55 +00:00
Yevgeny Kliteynik
d59b8d5dc4 Fixing malformed error message 
This commit was SVN r26434.
 2012-05-12 21:13:42 +00:00
Ralph Castain
1826b513ee Add missing windows file 
This commit was SVN r26433.
 2012-05-12 02:05:25 +00:00
Mike Dubman
98c2c749fb fix define name to BTL_OPENIB_MALLOC_HOOKS_ENABLED 
Thanks to Ludovic.Hablot@ext.bull.net  for pointing this out

This commit was SVN r26432.
 2012-05-11 18:30:45 +00:00
Ralph Castain
09f413025b As per the RFC, upgrade OMPI to libevent 2.0.19. Leave the 2.0.13 release in the system, but inactive, for now in case we discover a need to rollback. 
This commit was SVN r26431.
 2012-05-11 01:05:36 +00:00
Brian Barrett
2e52374847 * Split send and receive eq sizes 
* Need to look at slot count before flowcontrol for sending to prevent
  race in restart
* Need to free pending request fragments when done with the request
* A number of branch prediction optimizations for error conditions

This commit was SVN r26430.
 2012-05-10 21:43:48 +00:00
Jeff Squyres
2d78728d38 Fix the macro name in the comment: it's EXTRA_DIST, not EXTRA_SOURCES. 
This commit was SVN r26429.
 2012-05-10 14:07:36 +00:00
Jeff Squyres
ddcdc20640 Reconcile NEWS with 1.6 branch 
This commit was SVN r26428.
 2012-05-10 14:04:48 +00:00
Jeff Squyres
b325c17c72 It's a little weird to put in a blank _SOURCES line for the 
HDFSFileFinder PROGRAM, but if we don't put in a _SOURCES line at all,
Automake will default to "HDFSFileFinter_class_SOURCES =
HDFSFileFinder.c", which clearly will cause problems.  

But we don't want to put the .java file in _SOURCES, either, because
we haven't configured Automake to handle Java (because current
versions of Automake only have GCJ, not other Java compilers).  So set
HDFSFileFinder_class_SOURCES to blank and list the .java file in
EXTRA_SOURCES (so that they get picked up for "make dist").

This commit was SVN r26424.
 2012-05-10 13:54:51 +00:00
Yevgeny Kliteynik
244d66d95b Fixed FDR link speed details, added EDR. 
This commit was SVN r26423.
 2012-05-10 13:44:18 +00:00