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Граф коммитов

25006 Коммитов

Автор SHA1 Сообщение Дата
Ralph Castain
58dd41facf Repair the processing of cmd line options that mapped to MCA params. This was responsible for breaking things like map-by <foo>.
Remove debug, let orterun send terminate cmd to DVM

Recover the DVM support
2016-05-06 13:14:03 -07:00
Edgar Gabriel
7c92acaa78 Merge pull request #1637 from edgargabriel/pr/netbsd-compilation-problems
fs/lustre and fs/pvfs2: fix netbsd compilation problems
2016-05-06 08:05:36 -05:00
Josh Hursey
35ae7e33d7 Merge pull request #1639 from jjhursey/topic/dl-open-null-fname
dl/dlopen/libltdl: Allow opal_dl_open to take a NULL filename.
2016-05-05 22:15:46 -05:00
Ralph Castain
8ec1891d11 Silence warning 2016-05-05 20:04:10 -07:00
Jeff Squyres
810db734c4 Merge pull request #1640 from jsquyres/pr/mpir-cleanup
debuggers: remove some useless code
2016-05-05 21:23:30 -04:00
Gilles Gouaillardet
6c9d65c0ca coll/libnbc: fix MPI_Ireduce_scatter_block for one task communicator
Thanks Lisandro Dalcin for the report

Fixes open-mpi/ompi#248
2016-05-06 09:43:29 +09:00
rhc54
7a9b0bbf9f Merge pull request #1641 from rhc54/topic/cleanse
Some minor cleanups of warnings from gcc 6.0.0. Update s1/s2 pmix to …
2016-05-05 16:23:07 -07:00
Ralph Castain
08022d7af1 Some minor cleanups of warnings from gcc 6.0.0. Update s1/s2 pmix to get max_procs as required. 2016-05-05 15:28:13 -07:00
Jeff Squyres
83c2d04aa3 debuggers: remove some useless code
MPIR-1.0 specifies that the following symbols are only relevant in the
starter process:

- MPIR_Breakpoint
- MPIR_being_debugged
- MPIR_debug_state
- MPIR_debug_abort_string

I.e., the code filling in values in these various symbols was useless
/ never used.

MPIR-1.1 will define that MPIR_being_debugged *is* relevant in MPI
processes.  That symbol is currently defined in libopen-rte (which is
currently causing a duplicate symbol error for static builds -- this
commit fixes that error), and is therefore still available for MPI
processes.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2016-05-05 14:22:55 -07:00
Joshua Hursey
677178f206 dl/dlopen/libltdl: Allow opal_dl_open to take a NULL filename. 2016-05-05 17:07:26 -04:00
Jeff Squyres
f6fd676cad Merge pull request #1638 from jsquyres/pr/ompi-file-info-fix
ompio: always return valid info from FILE_GET_INFO
2016-05-05 16:08:07 -04:00
Jeff Squyres
f167be1c91 ompio: always return valid info from FILE_GET_INFO
MPI-3.1 says that even if no info keys are set on the file, we need to
return a new, empty info.

Thanks to Lisandro Dalcin for identifying the issue.

Fixes open-mpi/ompi#1630

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2016-05-05 12:03:29 -07:00
Aurélien Bouteiller
4899c89731 Fix a race condition when multiple threads try to create a bml endpoint simultaneously. 2016-05-05 10:49:30 -04:00
Aurélien Bouteiller
627a89bf71 Fix a race condition when multiple threads do the "first send" to an endpoint simultaneously. 2016-05-05 09:04:10 -04:00
Nathan Hjelm
80f45925bc Merge pull request #1629 from hjelmn/new_hooks_update
New hooks update
2016-05-04 18:53:25 -06:00
Joshua Hursey
788cf1a9fe asm/powerpc: Fix empty colon list in asm for XL compiler on power
Thanks to Paul Hargrove for reporting the problem, and submitting patch.
 * https://www.open-mpi.org/community/lists/devel/2016/05/18886.php
2016-05-04 14:14:33 -05:00
Nathan Hjelm
ff2a54bd37 patcher/linux: code cleanup
Update based on cleanup made to the upstream version on OpenUCX.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-04 12:53:45 -06:00
Nathan Hjelm
6c9a0e1c55 patcher/overwrite: disable ia64 support for now
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-04 12:53:24 -06:00
Nathan Hjelm
6ad68da407 patcher/linux: disable the linux patcher component
This commit disables the linux patcher component due to a limitation
in loader patching. While this component is effective in patching
calls made within Open MPI and by the application it fails to hook
calls made within glibc. This means the munmap call made by free is
not correctly hooked. Until this problem can be resolved this
component will remain disabled. If it can't be resolved this component
should probably be removed.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-04 12:50:51 -06:00
Nathan Hjelm
71be36d380 patcher: fix ppc32 support
The table of contents (TOC) code only appears to only apply to
ppc64. The code was incorrectly assuming the existence of the TOC on
ppc32. This commit updates the necessary code to only apply to ppc64.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-04 12:50:32 -06:00
Nathan Hjelm
41f00b7465 memory/patcher: initialize patcher framework when needed
This commit moves the patcher framework initialization to the
memory/patcher component.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-04 12:46:42 -06:00
Joshua Ladd
4771c9ece6 Merge pull request #1617 from jladd-mlnx/topic/disable-hcoll-barrier-in-finalize-ompi-trunk
HCOLL: fix hang in hcoll barrier called from finalize for MXM/yalla
2016-05-04 10:12:34 -04:00
Nathan Hjelm
0f54a95408 Merge pull request #1626 from hjelmn/vader_32
btl/vader: fix compilation on 32-bit systems
2016-05-03 16:39:46 -06:00
rhc54
ff8518853e Merge pull request #1604 from rhc54/topic/psm2
Improve the transport key print statement to ensure that we don't get…
2016-05-03 13:43:10 -07:00
Nathan Hjelm
4a740e9f27 Merge pull request #1619 from hjelmn/ext_verbs_fix
btl/openib: fix check for exp verbs struct members
2016-05-03 14:16:17 -06:00
Nathan Hjelm
c110d96687 Merge pull request #1622 from hjelmn/asm_fix
patcher: do not clobber ebx
2016-05-03 10:58:47 -06:00
Nathan Hjelm
e7ccbdee27 btl/vader: fix compilation on 32-bit systems
This commit fixes a compile/link issue caused by vader. The vader btl
was using OPAL_THREAD_ADD64 to increment a counter which may not be
available on 32-bit systems. Changed to use OPAL_THREAD_ADD_SIZE_T
which will be 64-bit or 32-bit depending on the system.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-03 10:14:44 -06:00
Aurélien Bouteiller
8344d00418 use-mpi extensions do not have a .la lib, so the fortran module should not depend on them. 2016-05-03 11:54:35 -04:00
Edgar Gabriel
78fa8bb2c4 remove some unused variables that can cause compilation problems on netbsd 2016-05-03 10:25:15 -05:00
Todd Kordenbrock
3498bed650 Merge pull request #1555 from shawone/check_reduce_ret
coll-portals4: check return value from reduce kary tree functions
2016-05-03 10:17:23 -05:00
Jeff Squyres
33dd8ca81e osc_rdma_peer: properly include ompi_config.h
Thanks to Paul Hargrove for reporting.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2016-05-03 07:39:55 -07:00
Nathan Hjelm
2d0e2b6233 patcher: do not clobber ebx
ebx can not be clobbered when using -fPIC so save and restore the
register instead of allowing it to be clobbered.

Signed-off-by: Nathan Hjelm <hjelmn@me.com>
2016-05-03 08:24:33 -06:00
Jeff Squyres
cd6ab54fdf opal_mca.m4: fix help message typo
Thanks to Paul Hargrove for reporting.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2016-05-03 07:24:06 -07:00
Jeff Squyres
cc53feaa66 Merge pull request #1621 from bgoglin/hwloc-for-2.0
linux: actually enable libudev based on the result of AC_CHECK_LIB
2016-05-03 06:34:44 -04:00
Brice Goglin
a2a721f961 linux: actually enable libudev based on the result of AC_CHECK_LIB
instead of doing AC_CHECK_HEADERS+AC_CHECK_LIB and only using the result of the former.

Thanks to Paul Hargrove for reporting the issue (OMPI build with -m32).

(cherry picked from open-mpi/hwloc@9549fd59af)
2016-05-03 10:00:40 +02:00
Nathan Hjelm
da695a6ce6 Merge pull request #1618 from hjelmn/new_hooks_update
More hook updates
2016-05-02 18:12:50 -06:00
Nathan Hjelm
566850e4b5 Merge pull request #1616 from hjelmn/rdma_fixes
osc/rdma: clear all_sync object when obtaining a lock
2016-05-02 17:58:43 -06:00
Nathan Hjelm
a65af6d079 btl/openib: fix check for exp verbs struct members
This commit fixes a compilation issue with some versions of exp
verbs. In some cases struct ibv_exp_device_attr does not have either
the exp_atom or exp_atomic_cap fields. It is fine to drop one check
and fall back to the non-exp attribute check on the other.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-02 17:13:33 -06:00
Nathan Hjelm
1ff79656dd patcher: remove debug fprintf
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-02 17:11:00 -06:00
Nathan Hjelm
581e47c271 patcher: check for clflush
Add a feature check for clflush before trying to use the clflush
instruction. As far as I can tell there is no equivalent before the
SSE2 instruction set.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-02 17:10:42 -06:00
Nathan Hjelm
67fd6fa6eb Merge pull request #1615 from hjelmn/new_hooks_update
memory/patcher: add #if check for MREMAP_FIXED
2016-05-02 16:26:58 -06:00
Devendar Bureddy
cafd55f18c HCOLL: fix hang in hcoll barrier called from finalize for MXM/yalla
tear down

HCOLL barrier may not complete if HCOLL progress is not called periodically.
which is the case in HCOLL teardown progress in the finalize.
(cherry picked from commit 793244d75dd94d1d5e0243bcccf6d04318750f3f)
2016-05-03 00:49:57 +03:00
Nathan Hjelm
d3d779f6d9 osc/rdma: clear all_sync object when obtaining a lock
This commit fixes a bad synchronization detection bug that occurs when
mixing MPI_Win_fence() and MPI_Win_lock(). If no communication has
occurred in the fence epoch it is safe to just clear the all_sync
object (it was set up by fence).

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-02 15:28:47 -06:00
Nathan Hjelm
eb14b34f04 memory/patcher: fix compilation on BSDs
The function signature of mremap on BSD (NetBSD, FreeBSD) differs from
the linux version. Added support for the BSD style of mremap.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-02 14:54:08 -06:00
Nathan Hjelm
52edb43bdc memory/patcher: check for linux/mman.h
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-02 14:29:46 -06:00
Nathan Hjelm
f8b3be6236 patcher/overwrite: fix ia64 compilation
Fixed a couple of typos in ia64 code.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-02 14:10:34 -06:00
Nathan Hjelm
14c34ae9f0 memory/patcher: add #if check for MREMAP_FIXED
This commit fixes a compile error when the system has mremap but not
MREMAP_FIXED. In this case we do not care about the value of
new_address as the argument does not exist.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-02 13:58:51 -06:00
Jeff Squyres
f3e3b800e9 opal_check_pmi.m4: remove stale code and comments
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2016-05-02 12:51:01 -04:00
rhc54
648043597a Merge pull request #1612 from ggouaillardet/poc/pmix_external_configury
pmix/external: revamp external pmix package detection
2016-05-02 09:46:05 -07:00
Jeff Squyres
8e0167422e NEWS: improve bullet about MPI_THREAD_MULTIPLE
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2016-05-02 10:24:19 -04:00