1
1

30015 Коммитов

Автор SHA1 Сообщение Дата
guserav
56c3d9a238 common/ofi: Set HPE as owner of component
Signed-off-by: guserav <erik.zeiske@web.de>
2019-08-20 10:13:02 -07:00
guserav
8a67a95c99 common/ofi: Fix open-mpi/ompi#2519
As discussed in open-mpi/ompi#2519 the common component does not depend
on libfabric yet. This commit introduces this dependency by just calling
fi_version().

Signed-off-by: guserav <erik.zeiske@hpe.com>
2019-08-12 16:17:59 -07:00
guserav
0e25c95eae common/ofi: Fix check for OFI in build files
The changes made in f5e1a672ccd5db127e85e1e8f6bcfeb8a8b04527
have been done after the common/ofi component was removed and thus the
component doesn't reflect the changes made their.

Namely f5e1a672ccd5db127e85e1e8f6bcfeb8a8b04527 changed:
- How to call OPAL_CHECK_OFI (It sets opal_ofi_happy to yes now)
- Dropped the common part in the build flags for ofi

Signed-off-by: guserav <erik.zeiske@web.de>
2019-08-12 16:15:23 -07:00
guserav
4ad78aaa15 Revert "Remove opal/mca/common/ofi."
This reverts commit dd20174532928e0c9cdbe7b206868e6e4bea9d0b.

Signed-off-by: guserav <erik.zeiske@web.de>
2019-08-09 10:33:21 -07:00
Ralph Castain
6159afc07a
Merge pull request #6872 from rhc54/topic/lsf2
Fix typos
2019-08-07 07:07:25 -07:00
Ralph Castain
bd5a1765ee
Fix typos
Provide a missing header and paren

Thanks to @zerothi for the assistance

Signed-off-by: Ralph Castain <rhc@pmix.org>
2019-08-07 05:47:12 -07:00
Yossi Itigin
ec9def1406
Merge pull request #6864 from hoopoepg/topic/ucx-ppn-hint
UCX: added PPN hint for UCX context
2019-08-07 13:45:38 +03:00
Ralph Castain
0b3fe2136e
Merge pull request #6869 from rhc54/topic/lsf
Allow individual jobs to set their map/rank/bind policies
2019-08-06 08:52:37 -07:00
Ralph Castain
ea0dfc3218
Allow individual jobs to set their map/rank/bind policies
Override the defaults when provided. Ignore LSF binding file if user
overrides by specifying a policy.

Fixes #6631

Signed-off-by: Ralph Castain <rhc@pmix.org>
2019-08-06 07:48:58 -07:00
Edgar Gabriel
9bb1e16dc1
Merge pull request #6867 from edgargabriel/pr/file_seek_fix
io_ompio_file_open: fix offset calculation with SEEK_END
2019-08-06 06:29:31 -05:00
Brian Barrett
827a2bcc3d
Merge pull request #6852 from wckzhang/opalifnamesize
opal/util: Change opal/util/if.h macro IF_NAMESIZE to OPAL_IF_NAMESIZE
2019-08-05 16:16:05 -07:00
Edgar Gabriel
34b06dc8bd io_ompio_file_open: fix offset calculation with SEEK_END
and SEEK_CUR. fixes an issue reported by Wei-keng Liao

Fixes Issue #6858

Signed-off-by: Edgar Gabriel <egabriel@central.uh.edu>
2019-08-05 15:56:25 -05:00
Ralph Castain
385da4eb45
Merge pull request #6866 from rhc54/topic/cov
Silence Coverity warning
2019-08-05 09:57:04 -07:00
Ralph Castain
0e878c1ac3
Silence Coverity warning
Signed-off-by: Ralph Castain <rhc@pmix.org>
2019-08-05 09:20:54 -07:00
Sergey Oblomov
43186e494b UCX: added PPN hint for UCX context
- added PPN hint for UCX context init

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2019-08-05 18:07:06 +03:00
Jeff Squyres
ddfef3078a
Merge pull request #6861 from ggouaillardet/topic/usempif08_sentinel
fortran/use-mpi-f08: slurp missing code
2019-08-05 06:23:59 -04:00
Gilles Gouaillardet
01fe53d531 fortran/use-mpi-f08: slurp missing code
Split the sentinel library in ompi/mpi/fortran/use-mpi-f08 into
 - the real sentinel that contains no code (only used to build the .mod files)
 - an internal library that does contain some code
and have libmpi_usempif08.la slurp the latter.

This fixes a regression introduced in open-mpi/ompi@5de5e751ed

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-08-04 17:06:33 +09:00
Gilles Gouaillardet
68ef097f1d
Merge pull request #6811 from ggouaillardet/topic/usempif08_sentinel
fortran/use-mpi-f08: do not slurp the sentinel module files
2019-08-01 10:45:47 +09:00
William Zhang
4ebb37a26c opal/util: Change opal/util/if.h macro IF_NAMESIZE to OPAL_IF_NAMESIZE
Due to IF_NAMESIZE being a reused and conditionally defined macro,
issues could arise from macro mismatches. In particular, in cases where
opal/util/if.h is included, but net/if.h is not, IF_NAMESIZE will be 32.
If net/if.h is included on Linux systems, IF_NAMESIZE will be 16. This
can cause a mismatch when using the same macro on a system. Thus
different parts of the code can have differring ideas on the size of a
structure containing a char name[IF_NAMESIZE]. To avoid this error case,
we avoid reusing the IF_NAMESIZE macro and instead define our own as
OPAL_IF_NAMESIZE.

Signed-off-by: William Zhang <wilzhang@amazon.com>
2019-07-29 21:24:39 +00:00
Ralph Castain
7b7ad5e354
Merge pull request #6851 from rhc54/topic/pmix
Update to PMIx master
2019-07-29 13:51:46 -07:00
Ralph Castain
c5c93e3391
Update to PMIx master
Signed-off-by: Ralph Castain <rhc@pmix.org>
2019-07-29 12:20:20 -07:00
Nysal Jan K A
3c45542c51
Merge pull request #6840 from nysal/ucx_accumulate_fix
osc/ucx: Fix data corruption with non-contiguous accumulates
2019-07-25 22:11:52 +05:30
Yossi Itigin
98d0ecfe14
Merge pull request #6814 from brminich/tuned_all2all_select
COLL/TUNED: Update alltoall selection rule for mellanox platform
2019-07-25 17:51:55 +03:00
Jeff Squyres
888f3ece78
Merge pull request #6828 from awlauria/mpir_breakpoint_noop_fix
Try to prevent the compiler from optimizing out MPIR_Breakpoint().
2019-07-24 13:49:33 -04:00
Austen Lauria
00106f5ac9 Try to prevent the compiler from optimizing out MPIR_Breakpoint().
Signed-off-by: Austen Lauria <awlauria@us.ibm.com>
2019-07-24 09:16:54 -04:00
Mikhail Brinskii
65618f8db8 COLL/TUNED: Minor var names/comments fixes
Signed-off-by: Mikhail Brinskii <mikhailb@mellanox.com>
2019-07-24 10:23:38 +00:00
Nysal Jan K.A
3529d44702 osc/ucx: Fix data corruption with non-contiguous accumulates
Signed-off-by: Nysal Jan K.A <jnysal@in.ibm.com>
2019-07-24 13:07:59 +05:30
bosilca
94f26f5a51
Merge pull request #6695 from bosilca/fix/vector_stride_0
A big refresh of the datatype engine
2019-07-23 15:20:14 -04:00
Ralph Castain
8f32a59304
Merge pull request #6830 from rhc54/topic/dpm
Provide locality for all procs on node
2019-07-23 08:10:57 -07:00
Nysal Jan K A
20dd06c151
Merge pull request #6826 from nysal/ucx_nolocks_infokey
osc/ucx: Add support for the no_locks info key
2019-07-23 15:33:39 +05:30
Gilles Gouaillardet
102a46e28a
Merge pull request #6812 from ggouaillardet/topic/mpifh_c_ierr
fortran/mpif-h: fix C to Fortran error code conversion
2019-07-23 17:07:26 +09:00
Gilles Gouaillardet
2a78aa87b6
Merge pull request #6832 from kawashima-fj/pr/alltoallw-init-binding
pcollreq/mpif-h: fix MPIX_Alltoallw_init() binding
2019-07-23 12:53:01 +09:00
KAWASHIMA Takahiro
facf8c5e98 pcollreq/mpif-h: fix MPIX_Alltoallw_init() binding
These issues were introduced in the recent commit b71af0eca0.
This commit fixes Coverity CID 1451661 and 1451660.

Though `c_info` part was an actual bug, the `c_sendtypes` part was not.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2019-07-23 08:45:17 +09:00
Ralph Castain
d202e10c14
Provide locality for all procs on node
Update PMIx to latest master to get supporting updates. For
connect/accept (part of comm_spawn as well), lookup locality for all
participating procs on the node and compute the relative locality so it
can be used for MPI operations.

Signed-off-by: Ralph Castain <rhc@pmix.org>
2019-07-22 09:23:38 -07:00
Nysal Jan K.A
14808922cf osc/ucx: Add support for the no_locks info key
Signed-off-by: Nysal Jan K.A <jnysal@in.ibm.com>
2019-07-18 17:29:01 +05:30
Gilles Gouaillardet
5bd90ee548
Merge pull request #6824 from ggouaillardet/topic/alltoallw_cid
fortran/mpif-h: fix MPI_Alltoallw and friends bindings
2019-07-17 12:59:07 +09:00
Gilles Gouaillardet
b71af0eca0 pcollreq/mpif-h: fix MPIX_Alltoallw_init() binding
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-07-17 11:58:18 +09:00
Gilles Gouaillardet
ed703bec1b fortran/mpif-h: fix [i]alltoallw bindings
Fix a regression introduced in open-mpi/ompi@cdaed89d04

Fixes CID 1451610, 1451611 and 1451612

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-07-17 11:14:35 +09:00
Brian Barrett
41c2007af5
Merge pull request #6820 from wckzhang/cleanup
btl tcp: Fix error path memory leak
2019-07-16 15:50:32 -07:00
Gilles Gouaillardet
06c6325bc8
Merge pull request #6822 from ggouaillardet/topic/pmix_refresh
pmix/pmix4x: refresh to the latest PMIx master
2019-07-16 12:56:31 +09:00
Gilles Gouaillardet
4510711e95 pmix/pmix4x: refresh to the latest PMIx master
refresh to pmix/pmix@03a8b5daab

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-07-16 11:31:20 +09:00
William Zhang
8c3b8a87c5 btl tcp: Fix error path memory leak
After the OPAL_MODEX_RECV call, remote_addrs was not freed in the error
path. Moved the free call into cleanup to ensure we always free this
memory before leaving the function.

Signed-off-by: William Zhang <wilzhang@amazon.com>
2019-07-15 22:35:04 +00:00
Jeff Squyres
0df0e5c364
Merge pull request #6813 from ggouaillardet/topic/alltoallw_inplace_mpifh
fortran/mpif-h: fix MPI_Alltoallw() binding
2019-07-15 11:47:22 -04:00
Mikhail Brinskii
404c480068 COLL/TUNED: Update alltoall selection rule for mlx
Use linear with sync alltoall algorithm for certain message/comm size
ranges. Does not affect default fixed decision, unless HPCX (with its
custom parameters) is used or corresponding mca is set.

Signed-off-by: Mikhail Brinskii <mikhailb@mellanox.com>
2019-07-13 23:27:40 +03:00
Gilles Gouaillardet
cdaed89d04 fortran/mpif-h: fix MPI_[I]Alltoallw() binding
- ignore sendcounts, sendispls and sendtypes arguments when MPI_IN_PLACE is used
 - use the right size when an inter-communicator is used.

Thanks Markus Geimer for reporting this.

Refs. open-mpi/ompi#5459

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-07-13 22:34:30 +09:00
Gilles Gouaillardet
223e6cc537 fortran/mpif-h: fix C to Fortran error code conversion
- remove incorrect use of OMPI_INT_2_FINT()
 - use homogenous syntax (e.g. c_ierr = PMPI_...())

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-07-13 18:36:12 +09:00
Gilles Gouaillardet
5de5e751ed fortran/use-mpi-f08: do not slurp the sentinel module files
A sentinel is only an internal Fortran module and hence should not
be slurped into libmpi_usempif08.so

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-07-13 16:50:55 +09:00
Gilles Gouaillardet
020a5918af
Merge pull request #2154 from ggouaillardet/topic/retain_op_and_datatypes
non-blocking collectives: retain MPI_op and MPI_Datatype(s)
2019-07-13 10:20:36 +09:00
Jeff Squyres
a985a0d7d1
Merge pull request #6809 from wkliao/man_vector
man page of MPI_Type_vector
2019-07-12 21:04:04 -04:00
Geoff Paulsen
4b696dca5b
Merge pull request #6660 from gpaulsen/task/master/revert-mpi1-removal-commits
Add --enable-mpi1-compatibility configure option back
2019-07-12 14:42:28 -05:00