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Ralph Castain
4d186e6402 Properly protect the MCA parameters being registered by the OOB/TCP component when IPv6 is enabled 
cmr=v1.8.3:reviewer=jsquyres

This commit was SVN r32662.
 2014-09-02 14:53:00 +00:00
Ralph Castain
1c4870357b Per patch submitted by J. Randall, add missing library to LSF integration 
cmr=v1.8.3:reviewer=rhc

This commit was SVN r32661.
 2014-09-02 00:38:07 +00:00
Ralph Castain
f2b26bde4c Resolve a race condition that could cause us to hang during abnormal terminations due to multi-counting num_terminated 
This commit was SVN r32660.
 2014-09-02 00:32:52 +00:00
Gilles Gouaillardet
edfbeba7bf coll/ml: better error handling 
when CHECK_AND_RECYCLE detects an error, a message is displayed
if the error occurs on an intrinsic communicator, then abort
the program (instead of trying to free the communicator)

cmr=v1.8.3:reviewer=hjelmn

This commit was SVN r32659.
 2014-09-01 10:00:49 +00:00
Gilles Gouaillardet
c2bcda518f oshmem: shpalloc returns the errcode as described in OpenSHMEM 1.1 api 
cmr=v1.8.3:reviewer=jladd

This commit was SVN r32658.
 2014-09-01 08:14:13 +00:00
Ralph Castain
aae1bb4f44 Silence warning 
This commit was SVN r32657.
 2014-08-31 08:10:35 +00:00
Ralph Castain
d13fb37ef9 Add array types to opal_value_t 
This commit was SVN r32656.
 2014-08-31 08:07:03 +00:00
Ralph Castain
9500939042 Fix abstraction violation 
This commit was SVN r32655.
 2014-08-31 08:06:35 +00:00
Mike Dubman
4497dada00 build: add "-verok" flag to ignore autotools version check and continue anyway. 
This commit was SVN r32654.
 2014-08-31 07:27:34 +00:00
MPI Team
f5905c7111 Update git/hg ignore files 
This commit was SVN r32653.
 2014-08-31 05:00:20 +00:00
Ralph Castain
60eb7124ab Upgrade to hwloc 1.9.1 
This commit was SVN r32652.
 2014-08-31 03:13:06 +00:00
Ralph Castain
e49ca05f11 Remove unused variable 
This commit was SVN r32651.
 2014-08-31 03:11:50 +00:00
Ralph Castain
5cdbc00136 Re-enable the usock oob component. Ensure the TCP component promotes messages for other procs to the OOB base so that other components have a chance to send the relay. Seems to be passing MTT, so let's see how it works for others. 
This commit was SVN r32650.
 2014-08-30 19:33:46 +00:00
Ralph Castain
a2085a5916 Fix the PSM transport key generator to match prior releases 
This commit was SVN r32649.
 2014-08-30 00:48:25 +00:00
Ralph Castain
9ac75451ff Nathan had requested this before as he needs to know the #procs in the job to optimize the UGNI btl. Add the fetch for that data - the native pmix component already provides it, but ensure the Slurm PMI-1 support does too. If not found, fall back to the non-optimized number 
This commit was SVN r32648.
 2014-08-29 22:53:35 +00:00
Ralph Castain
cb0739dfd4 Update the regex to resolve a bug 
This commit was SVN r32647.
 2014-08-29 22:24:20 +00:00
Ralph Castain
f865ef61ab Need local_size returned by the Slurm components 
This commit was SVN r32646.
 2014-08-29 22:23:27 +00:00
Howard Pritchard
9a2891f2d6 handle PMIX_LOCAL_SIZE attr arg in cray pmix 
This commit was SVN r32645.
 2014-08-29 21:18:02 +00:00
Ralph Castain
8faabed2cd Add some further initialization and protection for zero-byte messages 
This commit was SVN r32644.
 2014-08-29 17:24:55 +00:00
Ralph Castain
2b225e3776 Cleanup a race condition regarding marking that waitpid_fired. We should always mark it as fired when we enter the wait_local_proc routine, and also mark it as no longer alive if iof_complete has also been found. If other places in the code also update those flags, there is no harm done. 
This commit was SVN r32643.
 2014-08-29 17:03:31 +00:00
Gilles Gouaillardet
6916bfc368 btl/openib: fix use of mca_btl_openib_component.default_recv_qps 
- do not have mca_btl_openib_component.default_recv_qps point to the stack
- do not reset mca_btl_openib_component.default_recv_qps in btl_openib_component_open

cmr=v1.8.3:reviewer=miked

This commit was SVN r32642.
 2014-08-29 04:41:34 +00:00
Gilles Gouaillardet
b8a2e90f2d btl/openib: fix a typo 
cmr=v1.8.3:reviewer=miked

This commit was SVN r32639.
 2014-08-29 04:23:42 +00:00
Ralph Castain
730e28349e Some minor uninitialized variable cleanups 
This commit was SVN r32629.
 2014-08-29 02:21:13 +00:00
Jeff Squyres
733316372b usnic: remove suggestion of enabling no-drop in the fabric 
Reviewed by Reese Faucette

cmr=v1.8.3:reviewer=ompi-rm1.8

This commit was SVN r32628.
 2014-08-28 23:56:56 +00:00
Jeff Squyres
f4238d65a5 fortran: also provide PMPI variants for MPI_Alloc_mem_cptr 
r32622 was the first half of the fix -- we need the PMPI variants as well.

Refs trac:4882

This commit was SVN r32627.

The following SVN revision numbers were found above:
  r32622 --> open-mpi/ompi@cf0f734a98

The following Trac tickets were found above:
  Ticket 4882 --> https://svn.open-mpi.org/trac/ompi/ticket/4882
 2014-08-28 23:47:38 +00:00
Howard Pritchard
2a12fd833d Fix compile problem from pmix merge 
This commit was SVN r32626.
 2014-08-28 22:14:12 +00:00
Howard Pritchard
51c73f116b switch check for ugni to use pkg-config 
deprecate with-ugni in lanl/cray_xe6 platform file

This commit was SVN r32625.
 2014-08-28 22:03:41 +00:00
Ralph Castain
fafdbeec0c Cleanup and enable the new daemon collective modules for more scalable operations. Thanks to Nadezhda Kogteva (Mellanox) for doing them. 
This commit was SVN r32624.
 2014-08-28 20:35:35 +00:00
Jeff Squyres
008454a4a8 make_dist_tarball: check for a dirty source tree 
Have the make_dist_tarball script check to ensure that the source tree
is clean before continuing.  This ensures that we don't accidentally
build a distribution tarball with something that is not committed in
the repo.

There is a --dirtyok option to override this check, and if you access
this script via the "make_tarball" link, --dirtyok is added to the
default set of options.

cmr=v1.8.3:reviewer=rhc

This commit was SVN r32623.
 2014-08-28 13:26:33 +00:00
Gilles Gouaillardet
cf0f734a98 Fortran: add mpi_alloc_mem_cptr like bindings when configured with --without-weak-symbols 
cmr=v1.8.3:reviewer=jsquyres

This commit was SVN r32622.
 2014-08-28 09:34:54 +00:00
Ralph Castain
b554cd7d86 Turn off the coll/ml component if --without-hwloc was given 
cmr=v1.8.3:reviewer=jsquyres

This commit was SVN r32621.
 2014-08-27 20:25:39 +00:00
Ralph Castain
731a878ff3 Add a bunch of debug to help track down the problem, and eventually find another place where comparison of signatures was incorrectly performed - use the dss compare operation to be consistent and safe 
This commit was SVN r32620.
 2014-08-27 19:52:20 +00:00
Ralph Castain
5fb7c7d23b Don't explicitly add the hostname to the data fetch when we already cached a remote blob 
This commit was SVN r32619.
 2014-08-27 16:18:05 +00:00
Ralph Castain
3c24770bce Protect debug printing on backend nodes 
This commit was SVN r32618.
 2014-08-27 16:17:28 +00:00
Ralph Castain
b87b69e977 Ensure the nodes get added to the job map on the remote nodes, add some debug to grpcomm daemon array construction 
This commit was SVN r32617.
 2014-08-27 16:16:46 +00:00
Ralph Castain
842aaf6167 Correctly end mapping oversubscribed nodes round-robin byslot 
cmr=v1.8.3:reviewer=rhc

This commit was SVN r32616.
 2014-08-27 16:15:18 +00:00
Jeff Squyres
d85527701a Fix MPI_COMM_SPLIT_TYPE with MPI_UNDEFINED 
Thanks to Lisandro Dalcin for identifying the problem.

Fixes trac:4876

Submitted by George Boscila, reviewed by Jeff Squyres.

cmr=v1.8.3:reviewer=ompi-rm1.8

This commit was SVN r32615.

The following Trac tickets were found above:
  Ticket 4876 --> https://svn.open-mpi.org/trac/ompi/ticket/4876
 2014-08-27 12:17:33 +00:00
Gilles Gouaillardet
7e3784e0b7 MPI_Type_create_indexed_block.3: fix a typo in the man page 
cmr=v1.8.3:reviewer=jsquyres

This commit was SVN r32614.
 2014-08-27 03:48:03 +00:00
George Bosilca
8de93982d5 Correctly build the args for the hindexed_block datatype. 
cmr=v1.8.3:reviewer=jsquyres

This commit was SVN r32613.
 2014-08-27 03:45:07 +00:00
Gilles Gouaillardet
2679629a12 pmix: fix compilation when configured with --without-hwloc 
This commit was SVN r32604.
 2014-08-26 08:31:05 +00:00
Edgar Gabriel
46de730059 fix a typo 
This commit was SVN r32603.
 2014-08-25 20:53:19 +00:00
Edgar Gabriel
52eac0146d cleanup of the fbtl interfaces: remove the *sorted optimization flag, since it 
was not used anyway in the last two years. Simplifies the code significantly.

This commit was SVN r32602.
 2014-08-25 18:04:24 +00:00
Ralph Castain
9b95de1b62 Update the script to handle git as well as svn repos 
This commit was SVN r32598.
 2014-08-25 17:04:13 +00:00
Todd Kordenbrock
6a3225d800 Fix invalid symbols left by the PMIx merge. 
This commit was SVN r32597.
 2014-08-25 16:30:26 +00:00
Ralph Castain
1221e8a96f Compare the full signature - thanks to Gilles for identifying the problem 
This commit was SVN r32595.
 2014-08-25 14:52:06 +00:00
Gilles Gouaillardet
d440ee80a4 oshmem configury: fix a test 
Fix a test in r32590

Refs trac:4868

This commit was SVN r32594.

The following SVN revision numbers were found above:
  r32590 --> open-mpi/ompi@36b315db2d

The following Trac tickets were found above:
  Ticket 4868 --> https://svn.open-mpi.org/trac/ompi/ticket/4868
 2014-08-25 06:57:30 +00:00
Gilles Gouaillardet
df8baf685f oshmem configury: fix a typo 
Fix a typo in r32590

Refs trac:4868

This commit was SVN r32593.

The following SVN revision numbers were found above:
  r32590 --> open-mpi/ompi@36b315db2d

The following Trac tickets were found above:
  Ticket 4868 --> https://svn.open-mpi.org/trac/ompi/ticket/4868
 2014-08-25 04:41:56 +00:00
Gilles Gouaillardet
d743da18bf pmix: fix process name parsing on 32 bits systems 
opal_process_name_t is an uint64_t which is not equivalent to
an unsigned long on 32 bits systems.
this is now parsed as an unsigned long long.

This commit was SVN r32592.
 2014-08-25 03:08:02 +00:00
Jeff Squyres
e8eb07ad87 ompi_common_dll.c: the topo mtc union offset must be saved 
Since the union contains pointers -- not instances -- we need to save
the mtc offset to get to the pointers later.

This commit was SVN r32591.
 2014-08-23 15:42:44 +00:00
Jeff Squyres
36b315db2d oshmem configury: tighten up the pshmem checks 
Make the checks for macro weak symbols be equivalent to the checks for
weak symbols.

Also fix up several OSHMEM configure checks:

* fix an errant AC_MSG_REQUEST
* don't check for profiling ability during configure options checks.
  Instead, defer it to later, when we have weak symbol check results.
* don't directly call _FOO macros from the top level
* make setting up OSHMEM profiling similar to MPI profiling: create
  OSHMEM_SETUP_PROFILING macro
* cache the results of checking for macro weak symbols (for parity
  with the weak symbol check -- although we should really
  revisit/audit the whole cache-checking scheme throughout all m4
  code; it may well be inconsistently used)
* add some more [] m4 quoting, even in the original C weak symbols test
* style: fix some whitespace errors

Refs trac:4868

This commit was SVN r32590.

The following Trac tickets were found above:
  Ticket 4868 --> https://svn.open-mpi.org/trac/ompi/ticket/4868
 2014-08-23 10:50:14 +00:00