1
1
Граф коммитов

1138 Коммитов

Автор SHA1 Сообщение Дата
Ralph Castain
45af6cf59e The move of the orte_db framework to opal required that we create an opaque opal_identifier_t type as OPAL cannot know anything about the ORTE process name. However, passing a value down to opal and then having the db components reference it causes alignment issues on Solaris Sparc platforms. So pass the pointer instead and do the old "memcpy" trick to avoid the problem.
This commit was SVN r28308.
2013-04-08 23:34:16 +00:00
Ralph Castain
4dbc468c3c Remove stale file
This commit was SVN r28299.
2013-04-07 13:52:48 +00:00
Ralph Castain
c121a784ae Remove some weird code around opal_db_close and cleanup that framework's open/close operation
This commit was SVN r28298.
2013-04-07 13:52:28 +00:00
Ralph Castain
10257b8b43 Add missing include
This commit was SVN r28297.
2013-04-07 01:32:08 +00:00
Ralph Castain
1067b1f5ee Add a little debug
This commit was SVN r28295.
2013-04-06 15:24:35 +00:00
Ralph Castain
3bfa53eb91 Cleanup (again) the solaris topology code in hwloc...sigh.
This commit was SVN r28294.
2013-04-06 14:45:32 +00:00
Ralph Castain
ec00fa3132 Fix missing variable declaration in hwloc 1.5.2
This commit was SVN r28293.
2013-04-05 17:43:34 +00:00
Ralph Castain
39a4e93e44 Correct the includes so that compiling with devel headers works
This commit was SVN r28267.
2013-03-30 16:25:24 +00:00
Ralph Castain
d12eed0703 Silence warning
This commit was SVN r28249.
2013-03-27 22:07:29 +00:00
Nathan Hjelm
3b3506717e de-deprecate mca_base_param_init mca_base_param_finalize as they will be needed until the mca_base_param shim layer goes away
This commit was SVN r28248.
2013-03-27 22:07:23 +00:00
Ralph Castain
95cf39b224 Fix non-updated opal_output channel
This commit was SVN r28245.
2013-03-27 21:57:24 +00:00
Nathan Hjelm
c041156f60 Update ORTE frameworks to use the MCA framework system.
This commit was SVN r28240.
2013-03-27 21:14:43 +00:00
Nathan Hjelm
365cf48db5 Update OPAL frameworks to use the MCA framework system.
This commit was SVN r28239.
2013-03-27 21:11:47 +00:00
Nathan Hjelm
020b9991a4 Introduce the MCA framework system. This formalizes the interface frameworks must provide.
Other changes:
 - Added a flag to the MCA variable system to indicate a variable should go away
   when its group does. Both mca_base_framework_var_register() and
   mca_base_component_var_register() set this flag.

Notes:
 - mca_base_components_open is deprecated. It will be removed in a future commit.
 - All frameworks should use MCA_BASE_FRAMEWORK_DECLARE to declare their
   framework structure.
 - All calls to framework open/close functions should be changed to use the
   mca_base_framework_* functions.
 - Instead of special-casing installdirs a flag was added to prevent calling
   into the variable system when opening a framework.
 - Ralph: Clarify the functional definition of the "register" function in the
   MCA framework object - it had the same name as another function that does a
   totally different thing.
 - As per discussion with Ralph the behavior of mca_base_framework_register()
   is to always call mca_base_framework_components_register() if the framework's
   register function was successful. This removed the need for frameworks to
   have to call this function directly.

This commit was SVN r28237.
2013-03-27 21:10:18 +00:00
Nathan Hjelm
cf377db823 MCA/base: Add new MCA variable system
Features:
 - Support for an override parameter file (openmpi-mca-param-override.conf).
   Variable values in this file can not be overridden by any file or environment
   value.
 - Support for boolean, unsigned, and unsigned long long variables.
 - Support for true/false values.
 - Support for enumerations on integer variables.
 - Support for MPIT scope, verbosity, and binding.
 - Support for command line source.
 - Support for setting variable source via the environment using
   OMPI_MCA_SOURCE_<var name>=source (either command or file:filename)
 - Cleaner API.
 - Support for variable groups (equivalent to MPIT categories).

Notes:
 - Variables must be created with a backing store (char **, int *, or bool *)
   that must live at least as long as the variable.
 - Creating a variable with the MCA_BASE_VAR_FLAG_SETTABLE enables the use of
   mca_base_var_set_value() to change the value.
 - String values are duplicated when the variable is registered. It is up to
   the caller to free the original value if necessary. The new value will be
   freed by the mca_base_var system and must not be freed by the user.
 - Variables with constant scope may not be settable.
 - Variable groups (and all associated variables) are deregistered when the
   component is closed or the component repository item is freed. This
   prevents a segmentation fault from accessing a variable after its component
   is unloaded.
 - After some discussion we decided we should remove the automatic registration
   of component priority variables. Few component actually made use of this
   feature.
 - The enumerator interface was updated to be general enough to handle
   future uses of the interface.
 - The code to generate ompi_info output has been moved into the MCA variable
   system. See mca_base_var_dump().

opal: update core and components to mca_base_var system
orte: update core and components to mca_base_var system
ompi: update core and components to mca_base_var system

This commit also modifies the rmaps framework. The following variables were
moved from ppr and lama: rmaps_base_pernode, rmaps_base_n_pernode,
rmaps_base_n_persocket. Both lama and ppr create synonyms for these variables.

This commit was SVN r28236.
2013-03-27 21:09:41 +00:00
Jeff Squyres
1a048d6ee6 Remove a duplicate variable declaration.
This commit was SVN r28224.
2013-03-27 01:15:27 +00:00
Ralph Castain
317915225c Finish the binding cleanup by removing the no-longer-used binding level scheme. This proved to be fallible as there is no guarantee that the hierarchy it used matched physical reality of the machine (e.g., is L3 "above" the socket or not). Still have to complete the ppr update, but get the rest of it correct.
This commit was SVN r28223.
2013-03-26 20:09:49 +00:00
Ralph Castain
6ee32767d4 Restore the cpus-per-proc option for byslot and bynode mapping. Remove the bind_idx (which recorded the index of the hwloc object where the proc was bound) as this would no longer be unique, and just use the bitmap as the standard reference for location. Update the relative locality computation to take bitmaps as its argument.
This commit was SVN r28219.
2013-03-26 18:27:50 +00:00
Jeff Squyres
6c8d0450a3 Update the post-hwloc-1.5.2 patch list.
This commit was SVN r28218.
2013-03-26 16:18:52 +00:00
Jeff Squyres
f79716dfd4 Include <hwloc.h> so that the symbols in this file are subject to the
<hwloc/rename.h> renaming.

This commit was SVN r28215.
2013-03-26 15:49:52 +00:00
George Bosilca
a856f926de Remove a bunch of unused variables.
This commit was SVN r28213.
2013-03-26 14:34:29 +00:00
Jeff Squyres
6695b5e17a Re-apply r28040 from Eugene: a post-hwloc release fix for Solaris
binding.  This fix was included in the upstream 1.6 series, but not
the upstream 1.5 series, and was therefore missed when we brought
1.5.2 to OMPI.

This commit was SVN r28212.

The following SVN revision numbers were found above:
  r28040 --> open-mpi/ompi@3d44f97572
2013-03-26 13:27:23 +00:00
Ralph Castain
8a79d37ac2 Fix a few bugs in the hwloc integration code. The "set binding policy" macro should flag that the policy was indeed set. Some systems don't report sockets, so the print functions need to check for that condition.
cmr:v1.7

This commit was SVN r28209.
2013-03-25 17:51:45 +00:00
Brian Barrett
bc3ca9e009 Make the linux memory component do the failure path if it was disabled.
This commit was SVN r28206.
2013-03-22 16:56:09 +00:00
Brian Barrett
6c3f986d79 * Fix issue with duplicate symbol for the initialize hook due to it existing in both libmpi and libopen-pal by removing the one for libopen-pal. This won't work if we eventually need registration caching in opal/orte, but I'm hoping that by that point, OFED will have gotten off its butt and properly integrated ummunotify into the verbs layer so that this code can go away.
At the same time, fix a minor issue where the init hook was being called twice, once by the libc malloc and once by our malloc by removing the call from our malloc.

This commit was SVN r28202.
2013-03-21 23:05:54 +00:00
Jeff Squyres
e5838e6121 Don't mandate PCI support, because this will make builds on platforms
that don't have libpciaccess fail (e.g., OS X, or any machine without
libpciaccess).

This commit was SVN r28181.
2013-03-19 16:20:08 +00:00
Jeff Squyres
90802410a8 Update hwloc from 1.5.1 to 1.5.2. Re-enable hwloc PCI support by
default, since it will now use libpciaccess (if available).

This commit was SVN r28178.
2013-03-18 23:02:56 +00:00
Jeff Squyres
f8bbfacf65 Fix CID 967922: minor memory leak possibility.
This commit was SVN r28175.
2013-03-15 17:59:00 +00:00
Brian Barrett
fc2b3b8d46 Ugh. Work around an issue with memory hooks and the change from one big
library to multiple libraries that are implicitly sucked into the executable
as a dependency of libmpi.  The initialize hook isn't visible to libc on some
linux distributions when it's in libopal and libopal isn't explicity linked
into the executable.  The fix is to have a duplicate initialize hook in
libmpi as well as libopal.  *sigh*.

This commit was SVN r28164.
2013-03-11 19:22:24 +00:00
Ralph Castain
a4b6fb241f Remove all remaining vestiges of the Windows integration
This commit was SVN r28137.
2013-02-28 17:31:47 +00:00
Ralph Castain
8d2fa3693b First cut at removing the native Windows support. Remove all the Windows-specific components, and the .windows files sprinkled around. Remove the Windows platform files and MTT scripts. Update the NEWS to point Windows users to the cygwin package.
This commit was SVN r28116.
2013-02-26 20:44:56 +00:00
Ralph Castain
9479635e31 Missing include here too...
This commit was SVN r28115.
2013-02-26 20:21:10 +00:00
Ralph Castain
8b8333da3e Add missing include
This commit was SVN r28114.
2013-02-26 19:56:05 +00:00
Ralph Castain
e413596705 Add the loopexit API to the opal_event definitions
This commit was SVN r28113.
2013-02-26 19:27:26 +00:00
Ralph Castain
bd9265c560 Per the meeting on moving the BTLs to OPAL, move the ORTE database "db" framework to OPAL so the relocated BTLs can access it. Because the data is indexed by process, this requires that we define a new "opal_identifier_t" that corresponds to the orte_process_name_t struct. In order to support multiple run-times, this is defined in opal/mca/db/db_types.h as a uint64_t without identifying the meaning of any part of that data.
A few changes were required to support this move:

1. the PMI component used to identify rte-related data (e.g., host name, bind level) and package them as a unit to reduce the number of PMI keys. This code was moved up to the ORTE layer as the OPAL layer has no understanding of these concepts. In addition, the component locally stored data based on process jobid/vpid - this could no longer be supported (see below for the solution).

2. the hash component was updated to use the new opal_identifier_t instead of orte_process_name_t as its index for storing data in the hash tables. Previously, we did a hash on the vpid and stored the data in a 32-bit hash table. In the revised system, we don't see a separate "vpid" field - we only have a 64-bit opaque value. The orte_process_name_t hash turned out to do nothing useful, so we now store the data in a 64-bit hash table. Preliminary tests didn't show any identifiable change in behavior or performance, but we'll have to see if a move back to the 32-bit table is required at some later time.

3. the db framework was a "select one" system. However, since the PMI component could no longer use its internal storage system, the framework has now been changed to a "select many" mode of operation. This allows the hash component to handle all internal storage, while the PMI component only handles pushing/pulling things from the PMI system. This was something we had planned for some time - when fetching data, we first check internal storage to see if we already have it, and then automatically go to the global system to look for it if we don't. Accordingly, the framework was provided with a custom query function used during "select" that lets you seperately specify the "store" and "fetch" ordering.

4. the ORTE grpcomm and ess/pmi components, and the nidmap code,  were updated to work with the new db framework and to specify internal/global storage options.

No changes were made to the MPI layer, except for modifying the ORTE component of the OMPI/rte framework to support the new db framework.

This commit was SVN r28112.
2013-02-26 17:50:04 +00:00
Brian Barrett
7c3e42a689 Work around issue shown in #3505 by not linking against libpci by default.
This commit was SVN r28076.
2013-02-19 16:19:33 +00:00
Jeff Squyres
acefc1588e Patch for Cygwin support: Use S_IRWXU for shmget() and include
<sys/stat.h>.  Thanks to Marco Atzeri for reporting the issue and
providing an initial patch.

This commit was SVN r28060.
2013-02-15 14:31:58 +00:00
Ralph Castain
037918e7b4 Correctly parse the rank file slot_list when given "S:C" - the first position holds the socket, so start looking for cores at posn=1
This commit was SVN r28054.
2013-02-13 13:06:03 +00:00
Eugene Loh
3d44f97572 Fix hwloc get-cpubind routine for Solaris. FIRST, check
processor_bind to see if we're bound to a single core.
If not, THEN check lgroup affinity.  Already CMR'ed to
v1.6 (trac 3507) and fixed upstream in hwloc (r5295).

This commit was SVN r28040.

The following SVN revision numbers were found above:
  r5295 --> open-mpi/ompi@6df8cb0f02
2013-02-10 04:02:19 +00:00
Nathan Hjelm
05a8958bb0 shmem_RUNTIME_QUERY_hint is not really read_only as it is set from the environment not the default value
This commit was SVN r28005.
2013-01-31 23:41:00 +00:00
Brian Barrett
b8442ba505 Revamp the handling of wrapper compiler flags. The user flags, main configure
flags, and mca flags are kept seperate until the very end.  The main configure
wrapper flags should now be modified by using the OPAL_WRAPPER_FLAGS_ADD
macro.  MCA components should either let <framework>_<component>_{LIBS,LDFLAGS}
be copied over OR set <framework>_<component>_WRAPPER_EXTRA_{LIBS,LDFLAGS}.
The situations in which WRAPPER CPPFLAGS can be set by MCA components was
made very small to match the one use case where it makes sense.

This commit was SVN r27950.
2013-01-29 00:00:43 +00:00
Ralph Castain
f6b4db0b79 Fix rank_file operations. We changed the syntax to use semi-colons between multiple slot assignments so that we could use the comma to separate specific cores, but somehow the flex definitions didn't get updated to accept that character. We also incorrectly zero'd the bitmap between slot assignment sections, and so multiple slot assignments only wound up making the last one in the list.
This commit was SVN r27908.
2013-01-25 18:33:25 +00:00
Brian Barrett
cdf0325589 Keep libevent headers from being installed in the wrong place. The top level
Makefile.am gets them installed in the right place already

This commit was SVN r27903.
2013-01-24 22:23:51 +00:00
Brian Barrett
4f41f5ce5b OPAL_WRAPPER_EXTRA_CPPFLAGS is the wrong variable, want to set
WRAPPER_EXTRA_CPPFLAGS

This commit was SVN r27886.
2013-01-21 23:37:35 +00:00
Ralph Castain
92e297d1fa Pack/unpack the disk and net stats so they get passed along
This commit was SVN r27844.
2013-01-16 21:54:48 +00:00
Samuel Gutierrez
cba06776f1 Fix copy and paste error in linux memory component debug output.
This commit was SVN r27842.
2013-01-16 18:27:57 +00:00
Ralph Castain
f29f1b731c Extend the node statistics to include disk and network traffic data.
This commit was SVN r27834.
2013-01-15 22:42:36 +00:00
Ralph Castain
2379b7369f Hey Jeff - AC_HELP_STRING takes *two* arguments, dude!
This commit was SVN r27820.
2013-01-15 15:25:58 +00:00
Jeff Squyres
e30d9a2bfb The "external" hwloc component didn't have the same fixes applied to
it that the others did: move the "I won!" code up into the POST_CONFIG
macro.  Also, fix a long-standing typo when restoring the $CPPFLAGS (!).

This commit was SVN r27813.
2013-01-14 21:44:47 +00:00
Jeff Squyres
423208932e HWLOC_DO_AM_CONDITIONALS must be run unconditionally.
This commit was SVN r27812.
2013-01-14 21:43:16 +00:00
Jeff Squyres
c17ec83de3 Add some post-v1.5.1 release hwloc bug fixes
This commit was SVN r27805.
2013-01-14 16:25:21 +00:00
Jeff Squyres
c7cb363da9 Remove some more generated files.
This commit was SVN r27800.
2013-01-12 03:30:43 +00:00
Jeff Squyres
4d6f026941 Fix a typo.
This commit was SVN r27799.
2013-01-12 03:30:29 +00:00
Ralph Castain
4d43585a1e Cleanup new hwloc install - remove build products that were accidentally included in the commit, remove non-existent file from Makefile.am
This commit was SVN r27798.
2013-01-12 03:21:53 +00:00
Jeff Squyres
3ce170d463 Update the embedded hwloc from v1.4.2 to v1.5.1.
This commit was SVN r27797.
2013-01-12 02:08:04 +00:00
Jeff Squyres
427c154800 Similar to r27794, simplify the hwloc framework by changing it to
STOP_AT_FIRST.  And move the side-effect-inducing code in
hwloc142/configure.m4 up to POST_CONFIG.

Also change the priority of the external hwloc component to 90 so that
it is evaluated before the internal component (as a direct result of
changing to STOP_AT_FIRST).

This commit was SVN r27796.

The following SVN revision numbers were found above:
  r27794 --> open-mpi/ompi@569a60c2de
2013-01-12 01:48:53 +00:00
Jeff Squyres
a0874b61e6 Remove debugging message.
This commit was SVN r27795.
2013-01-12 01:33:54 +00:00
Jeff Squyres
569a60c2de In short: this commit removes a bunch of code by switching the opal
event framework to STOP_AT_FIRST, and then moves a bunch of
side-effect-inducing code in the libevent2019 configure.m4 up to
POST_CONFIG.

== More detail ==

Change the event framework from STOP_AT_FIRST_PRIORITY to
STOP_AT_FIRST.  This means that only one component can win (vs. all
STOP_AT_FIRST_PRIORITY, in which multiple components of the same
priority can all win).

You still need to ensure that there are no side-effects from the
winner, however, so check for winning during POST_CONFIG, and set
things like the base_include there.

This simplifies the configury quite a bit -- you don't have to assume
that mulitple components can win: zero or one components will win.

Also change the libevent 2019 priority to 50 so that some other
(developer-specific/local) component could win, if it wanted to.

This commit was SVN r27794.
2013-01-12 01:28:37 +00:00
Jeff Squyres
b2d5d1e348 Along with the Automake 1.13.x changes in r27790, rename these third
party configure.in scripts to be configure.ac so that Automake stops
complaining about them.

This commit was SVN r27791.

The following SVN revision numbers were found above:
  r27790 --> open-mpi/ompi@675a2f5c48
2013-01-11 20:26:19 +00:00
Jeff Squyres
675a2f5c48 Updates for Automake 1.13.x. Without these changes, Automake 1.13.x
will error out, due to use of the
previously-deprecated-and-now-removed AM_CONFIG_HEADER macro.

This commit was SVN r27790.
2013-01-11 20:20:02 +00:00
Samuel Gutierrez
4c28c8cbd0 New sm BTL initialization take two. This approach is pretty simple. Instead of
using the modex or RML to share sm initialization information, have node rank 0
create a file containing initialization information in a well-known place. Then
during add_procs, the rest of the node processes requiring sm BTL initialization
will just read from that file to complete their initialization.

This commit was SVN r27789.
2013-01-11 16:24:56 +00:00
Jeff Squyres
e9ae2567f0 Based on a bug report and suggested fix from Darshan maintainer Phil
Carns, change to use access(.., F_OK) instead of stat() to check for
the presence of files.

Also remove redundant check for FAKEROOTKEY, and update all comments
to match.

This commit was SVN r27785.
2013-01-10 14:43:07 +00:00
Ralph Castain
4834fb7e6d Minor change to the way we record test data
This commit was SVN r27749.
2013-01-05 06:31:20 +00:00
Samuel Gutierrez
c4acd20eb9 Backout r27739.
This commit was SVN r27745.

The following SVN revision numbers were found above:
  r27739 --> open-mpi/ompi@a159bfaf25
2013-01-05 01:54:23 +00:00
Samuel Gutierrez
a159bfaf25 sm BTL initialization via modex, as discussed at last year's meeting.
This commit was SVN r27739.
2013-01-03 21:52:20 +00:00
Ralph Castain
cada035f38 Fix the segfault problem in the orteds - turns out it only occurred with progress threads enabled. Ensure the thread gets started at the right time (at the end of init), although the event base gets created earlier. Remove the finalize event as we can instead use the loopbreak call to exit the event loop.
This commit was SVN r27721.
2012-12-25 19:30:18 +00:00
Jeff Squyres
b29b852281 Consolidate all the opal/orte/ompi .m4 files back to the top-level
config/ directory.  We split them apart a while ago in the hopes that
it would simplify things, but it didn't really (e.g., because there
were still some ompi/opal .m4 files in the top-level config/
directory, resulting in developer confusion where any given m4 macro
was defined).

So this commit consolidates them back into the top-level directory for
simplicity.  

There's still (at least) two changes that would be nice to make:

 1. Split any generated .m4 file (e.g., autogen-generated .m4 files)
    into a separate directory somewhere so that a top-level -Iconfig/
    will only get our explicitly defined macros, not the autogen stuff
    (e.g., with libevent2019 needing to get the visibility macro, but
    NOT all the autogen-generated inclusion of component configure.m4
    files).
 1. Change configure to be of the form:
{{{
# ...a small amount of preamble/setup...
OPAL_SETUP
m4_ifdef([project_orte], [ORTE_SETUP])
m4_ifdef([project_ompi], [OMPI_SETUP])
# ...a small amount of finishing stuff...
}}}

I doubt we'll ever get anything as clean as that, but that would be
the goal to shoot for.

This commit was SVN r27704.
2012-12-19 00:00:36 +00:00
Nathan Hjelm
5449c45444 Per RFC: Make mca_base_param_deregister usable by changing its behavior to create a hole in the parameter array instead of deleting the parameter.
The old behavior of mca_base_param_deregister could cause the indices of other mca parameters to change. This could potentially cause problems if a mca user saves and later references an affected index.

This commit was SVN r27633.
2012-11-26 20:55:02 +00:00
Nathan Hjelm
87e5f97400 add missing #include of opal/util/output.h
This commit was SVN r27599.
2012-11-13 07:14:41 +00:00
Nathan Hjelm
bdedd8b0d3 Per RFC modify the behavior of mca_base_components_close to NOT close the output. Modify frameworks to always close their output and set to -1.
Reasoning: The old behavior was a little confusing. mca_base_components_open does not open an output stream so it is a little unexpected that mca_base_components_close does. To add to this several frameworks (that don't use mca_base_components_close) failed to close their output in the framework close function and others closed their output a second time. This change is an improvement to the symantics of mca_base_components_open/close as they are now symetric in their functionality.

This commit was SVN r27570.
2012-11-06 19:09:26 +00:00
Nathan Hjelm
f3ce12e71a Per RFC fix several leaks in opal and ompi. Details below.
pml/v:
  - If vprotocol is not being used vprotocol_include_list is leaked. Assume vprotocol never takes ownership (see below) and always free the string.

coll/ml:
  - (patch verified) calling mca_base_param_lookup_string after mca_base_param_reg_string is unnecessary. The call to mca_base_param_lookup_string causes the value returned by mca_base_param_reg_string to be leaked.
  - Need to free mca_coll_ml_component.config_file_name on component close.

btl/openib:
  - calling mca_base_param_lookup_string after mca_base_param_reg_string is unnecessary. The call to mca_base_param_lookup_string causes the value returned by mca_base_param_reg_string to be leaked.

vprotocol/base:
  - There was no way for pml/v to determine if vprotocol took ownership of vprotocol_include_list. Fix by always never ownership (use strdup).

mca/base:
  - param_lookup will result in storage->stringval to be a newly allocated string if the mca parameter has a string value. ensure this string is always freed.

cmr:v1.7

This commit was SVN r27569.
2012-11-06 18:57:46 +00:00
Nathan Hjelm
906e29ed96 Fix leaks in the opal if posix code. Error paths were not calling OBJ_RELEASE on an opal_if_t created with OBJ_NEW.
This affects both trunk and 1.7 and might affect 1.6.

cmr:v1.7

This commit was SVN r27562.
2012-11-05 20:51:10 +00:00
Ralph Castain
bc54976f13 Silence warnings when threads are enabled
This commit was SVN r27550.
2012-11-01 03:34:51 +00:00
Nathan Hjelm
2acd0f83de Revert "Revert r27451 and r27456 - the cmd line parser is incorrectly marking the application as an MCA parameter".
It appears the problem was not with the command line parser but the rsh plm. I don't know why this problem was not occuring before the command line parser changes but it appears to be resolved now.

This commit was SVN r27527.

The following SVN revision numbers were found above:
  r27451 --> open-mpi/ompi@d59034e6ef
  r27456 --> open-mpi/ompi@ecdbf34937
2012-10-30 19:45:18 +00:00
Ralph Castain
6aac54b02e Revert r27510, r27509, and r27508.
Not sure what happened here, but the resulting trunk wouldn't even configure. After spending time fixing that problem, I found it wouldn't compile due to multiple syntax errors that had been introduced in both the OPAL and OMPI layer. This raised questions as to the completeness of the work.

Given that the author is departing, I pinged Jeff about it and we agreed to revert this for now. Hopefully, it can either be fixed by the author prior to actual departure, or someone else can pick it up (now that it is in the history) and fix it.

This commit was SVN r27511.

The following SVN revision numbers were found above:
  r27508 --> open-mpi/ompi@12c3c743de
  r27509 --> open-mpi/ompi@79e4a8ca38
  r27510 --> open-mpi/ompi@1ad5ff625a
2012-10-27 16:43:45 +00:00
Shiqing Fan
12c3c743de Per the MemPin RFC, submit the component source files, and update the memchecker macros.
This commit was SVN r27508.
2012-10-27 02:48:20 +00:00
Ralph Castain
e6014bf2e1 Revert r27451 and r27456 - the cmd line parser is incorrectly marking the application as an MCA parameter
This commit was SVN r27477.

The following SVN revision numbers were found above:
  r27451 --> open-mpi/ompi@d59034e6ef
  r27456 --> open-mpi/ompi@ecdbf34937
2012-10-24 18:38:44 +00:00
Nathan Hjelm
d59034e6ef MCA: remove deprecated mca_base_param functions (mca_base_param_register_int, mca_base_param_register_string, mca_base_param_environ_variable). Remove all uses of deprecated functions.
cmr:v1.7

This commit was SVN r27451.
2012-10-17 20:17:37 +00:00
Samuel Gutierrez
1f24f1d305 Update the data types used in opaldf to minimize the chance of overflow when
determining the amount of available space. Thanks to Eugene for pointing out the
issue.

This commit was SVN r27436.
2012-10-11 16:11:23 +00:00
Samuel Gutierrez
21be553e21 Add Windows support to opaldf and shmem/windows -- thanks Shiqing. Next commit
will fix issues found by Eugene.

This commit was SVN r27435.
2012-10-11 14:49:41 +00:00
Samuel Gutierrez
dcd4493f54 Properly report the amount of free space on failure.
This commit was SVN r27434.
2012-10-10 19:49:52 +00:00
Samuel Gutierrez
0461826a4b Fix bus errors caused by an inadequate amount of space during
opal_shmem_segment_create by testing whether or not the target mount has enough
space to accommodate the shared-memory backing store. Fixes trac:2827. Will work
with Shiqing to add Windows support (if required).

This commit was SVN r27433.

The following Trac tickets were found above:
  Ticket 2827 --> https://svn.open-mpi.org/trac/ompi/ticket/2827
2012-10-09 20:48:04 +00:00
Jeff Squyres
6af6809dc2 * Fix some comments.
* Use the hwloc logical index, not the os_index.  Fixes problems with
   opal_hwloc_base_cset2str() output (e.g., --report-bindings output)
   on machines where the os_index is not tightly packed in the range
   ![0, n-1]

This commit was SVN r27394.
2012-10-03 09:33:40 +00:00
Ralph Castain
36679e19df Add a convenient macro for debugging process binding that shows the current binding pattern - helps when trying to figure out when a process got bound, and to where
This commit was SVN r27387.
2012-10-01 15:06:15 +00:00
Ralph Castain
5639d1617f Move missing piece to required visibility
This commit was SVN r27380.
2012-09-27 01:43:54 +00:00
Ralph Castain
54db4c35eb Get the trunk to build again when --without-hwloc is specified. Move a couple of key type definitions and utilities out from under the HAVE_HWLOC test so they are always available as they don't really depend on hwloc's presence. Tell two compnents not to build if hwloc is disabled:
ompi/mca/sbgp/basesmsocket
orte/mca/rmaps/lama

Remove stale configure.params files from the sbgp framework as the OMPI build system no longer looks at those files.

This commit was SVN r27377.
2012-09-26 23:24:27 +00:00
Pavel Shamis
4935b9d930 Fixing compilation error. Adding missing output.h.
This commit was SVN r27375.
2012-09-26 15:52:09 +00:00
Brian Barrett
cb6831830a Remove the TSD_HACKS macro. The TSD hack is only for non-glibc libraries
and we only build the linux memory component on glibc, so this shouldn't
be needed.

This commit was SVN r27371.
2012-09-26 07:42:43 +00:00
Ralph Castain
01504239e6 Enable some debugging in the if discovery code
This commit was SVN r27367.
2012-09-25 20:23:37 +00:00
Ralph Castain
662bc05aa6 Refs trac:3322
Cannot start the data clearing at the root object level as the root object has a different struct attached to userdata.

This commit was SVN r27357.

The following Trac tickets were found above:
  Ticket 3322 --> https://svn.open-mpi.org/trac/ompi/ticket/3322
2012-09-20 23:30:32 +00:00
Ralph Castain
d95025f53a Ensure we clear the usage numbers when binding on multiple nodes so we don't "carry over" info from one node to the next. Use the same tracking mechanism for binding upwards and in-place to avoid doing a bunch of mallocs.
Refs trac:3322

This commit was SVN r27356.

The following Trac tickets were found above:
  Ticket 3322 --> https://svn.open-mpi.org/trac/ompi/ticket/3322
2012-09-20 15:16:06 +00:00
Ralph Castain
a3060cdd15 Fix the bind_downward code - it was incorrectly looking across the entire node instead of only looking below the locale to which the proc had been assigned. In other words, if the proc was mapped to a core, then the only hwthreads that should be considered for binding are those directly below that core. The binding algo was incorrectly looking at ALL hwthreads in that scenario, causing the proc to be bound to an HT outside of the mapped location.
This now results in the procs being bound within their assigned location. It also causes us to use only the 0th HT on a core unless --use-hwthread-cpus has been specified (in which case, we use all the HTs in a core). Bind to core binds you to all HTs regardless - the --use-hwthread-cpus only impacts the oversubscribed determination and when binding to HT.

cmr:v1.7

This commit was SVN r27342.
2012-09-14 22:01:19 +00:00
Jeff Squyres
fb2e543a57 Refs trac:3275.
We ran into a case where the OMPI SVN trunk grew a new acceptable MCA
parameter value, but this new value was not accepted on the v1.6
branch (hwloc_base_mem_bind_failure_action -- on the trunk it accepts
the value "silent", but on the older v1.6 branch, it doesn't).  If you
set "hwloc_base_mem_bind_failure_action=silent" in the default MCA
params file and then accidentally ran with the v1.6 branch, every OMPI
executable (including ompi_info) just failed because hwloc_base_open()
would say "hey, 'silent' is not a valid value for
hwloc_base_mem_bind_failure_action!".  Kaboom.

The only problem is that it didn't give you any indication of where
this value was being set.  Quite maddening, from a user perspective.

So we changed the ompi_info handles this case.  If any framework open
function return OMPI_ERR_BAD_PARAM (either because its base MCA params
got a bad value or because one of its component register/open
functions return OMPI_ERR_BAD_PARAM), ompi_info will stop, print out
a warning that it received and error, and then dump out the parameters
that it has received so far in the framework that had a problem.

At a minimum, this will show the user the MCA param that had an error
(it's usually the last one), and ''where it was set from'' (so that
they can go fix it).  

We updated ompi_info to check for O???_ERR_BAD_PARAM from each from
the framework opens.  Also updated the doxygen docs in mca.h for this
O???_BAD_PARAM behavior.  And we noticed that mca.h had MCA_SUCCESS
and MCA_ERR_??? codes.  Why?  I think we used them in exactly one
place in the code base (mca_base_components_open.c).  So we deleted
those and just used the normal OPAL_* codes instead.

While we were doing this, we also cleaned up a little memory
management during ompi_info/orte-info/opal-info finalization.
Valgrind still reports a truckload of memory still in use at ompi_info
termination, but they mostly look to be components not freeing
memory/resources properly (and outside the scope of this fix).

This commit was SVN r27306.

The following Trac tickets were found above:
  Ticket 3275 --> https://svn.open-mpi.org/trac/ompi/ticket/3275
2012-09-11 20:47:24 +00:00
Jeff Squyres
8076cf8089 Abort configure if --enable-memchecker was specified, but then no
memchecker components were able to configure successfully.

This commit was SVN r27267.
2012-09-07 16:08:43 +00:00
Ralph Castain
67f34c3be6 Record the bind_level recvd by the daemon for each job so it can be correctly sent to the procs. Add test in get_relative_locality to avoid descending into an infinite loop if the level is NODE (==0).
This commit was SVN r27252.
2012-09-06 20:50:07 +00:00
Shiqing Fan
0326e88c51 As opal_hwloc_topo_data_t has to create a class instance in orte, its definition has to be exported. Otherwise, there will be unresolved variable error on Windows.
This commit was SVN r27227.
2012-09-04 13:52:29 +00:00
Jeff Squyres
dd5bd99942 Clean up the error message names from the hwloc base, and add a
missing error message.

This commit was SVN r27180.
2012-08-29 16:40:46 +00:00
Ralph Castain
ad4cdd1a64 Sigh - add a continuation character so we don't lose required files
This commit was SVN r27004.
2012-08-11 16:19:29 +00:00
Ralph Castain
85af056090 GARRR...Remove the stupid dot <sigh>
This commit was SVN r27003.
2012-08-11 15:49:31 +00:00
Ralph Castain
acaaadb7a1 Correct file names for Windows events
This commit was SVN r27002.
2012-08-11 15:28:28 +00:00