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Gilles Gouaillardet
4918fc4455 Revert "fortran/mpif-h: keep include path for extension short" 
This reverts commit open-mpi/ompi@848a868f7b.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
 2018-12-06 15:39:59 +09:00
Gilles Gouaillardet
ccbdc8fd58 Revert "c: keep include path for extension short" 
This reverts commit open-mpi/ompi@27c25fa721.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
 2018-12-06 15:39:54 +09:00
Gilles Gouaillardet
a21602d993
Merge pull request #6156 from ggouaillardet/topic/ORTE_WANT_REPO_REV 
cleanup: remove the unused (and unexpanded) {ORTE,OMPI}_WANT_REPO_REV macro
 2018-12-06 13:59:26 +09:00
Gilles Gouaillardet
a152aa215e cleanup: remove the unused (and unexpanded) {ORTE,OMPI}_WANT_REPO_REV macro 
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
 2018-12-06 13:13:13 +09:00
Gilles Gouaillardet
fccb3e7514
Merge pull request #6137 from ggouaillardet/topic/ucx_warning 
btl/openib: delay UCX warning to add_procs()
 2018-12-05 11:50:10 +09:00
Matias Cabral
abd34620f4
Merge pull request #5972 from aravindksg/ofi_sep_master 
MTL/OFI: Add OFI Scalable Endpoint support
 2018-12-04 13:07:44 -08:00
Nathan Hjelm
3113d20988
Merge pull request #6144 from yosefe/topic/ucx-components-add-owner-txt 
ucx: add owner.txt for components
 2018-12-03 10:58:56 -07:00
Aravind Gopalakrishnan
109d0569ff MTL/OFI: Add OFI Scalable Endpoint support 
OFI MTL supports OFI Scalable Endpoints feature as means to improve
multi-threaded application throughput and message rate. Currently the feature
is designed to utilize multiple TX/RX contexts exposed by the OFI provider in
conjunction with a multi-communicator MPI application model. For more
information, refer to README under mtl/ofi.

Reviewed-by: Matias Cabral <matias.a.cabral@intel.com>
Reviewed-by: Neil Spruit <neil.r.spruit@intel.com>
Signed-off-by: Aravind Gopalakrishnan <Aravind.Gopalakrishnan@intel.com>
 2018-12-03 09:56:52 -08:00
Yossi Itigin
09e13ad7b0 sshmem_ucx: add owner.txt 
Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
 2018-12-02 11:25:30 +02:00
Yossi Itigin
83cca9d52a ucx: add owner.txt for components 
Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
 2018-12-01 17:14:03 +02:00
Matias Cabral
f784ce3459
Merge pull request #6142 from matcabral/remove_lower_ofi_p 
MTL/OFI: revert PR 6082
 2018-11-30 14:50:28 -08:00
matcabral
6a15712df5 MTL/OFI: revert PR 6082 
Revert to avoid issues with dynamic processes.

Signed-off-by: matcabral <matias.a.cabral@intel.com>
 2018-11-30 13:44:39 -08:00
Matias Cabral
ef5db1b752
Merge pull request #6082 from matcabral/lower_mtl_ofi_p 
MTL/OFI: Lower priority when all procs are local
 2018-11-30 12:05:40 -08:00
Ralph Castain
6c166e202d
Merge pull request #6138 from rhc54/topic/rmap 
Fix typo for rmaps_base_oversubscribe
 2018-11-29 08:35:39 -08:00
Ralph Castain
c86fede9df Fix typo for rmaps_base_oversubscribe 
Causes the MCA param to be ignored, while the cmd line option still
works.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2018-11-29 07:27:46 -08:00
Gilles Gouaillardet
0a2ce58040 btl/openib: delay UCX warning to add_procs() 
If UCX is available, then pml/ucx will be used instead of
pml/ob1 + btl/openib, so there is no need to warn about
btl/openib not supporting Infiniband.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
 2018-11-29 16:20:55 +09:00
Jeff Squyres
c5292a0094
Merge pull request #6133 from jsquyres/readme-fix-typo 
README: Fix a typo
 2018-11-28 17:51:24 -05:00
Jeff Squyres
e6241eaf6b README: Fix a typo 
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
 2018-11-28 14:01:09 -08:00
Ralph Castain
52c455f16e
Merge pull request #6125 from rhc54/topic/pset 
Support process set names and update ignores
 2018-11-27 12:21:36 -08:00
Ralph Castain
791bf3c2cd Update ignores 
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2018-11-27 11:09:02 -08:00
Ralph Castain
f609542bbf Implement process set name support 
Add the --pset option for app_contexts so the user can provide a string
name for each app_context. Use the new PMIx pset attribute to store the
names in the PMIx local storage for retrieval

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
 2018-11-27 11:07:58 -08:00
Nathan Hjelm
5ebcbe444e
Merge pull request #6083 from devreal/rdma-plug-memleak 
Plug two memory leaks in rdma osc
 2018-11-27 09:56:19 -07:00
Nathan Hjelm
27084c60c9
Merge pull request #6123 from hoopoepg/topic/osc-ucx-max-level-60 
OSC/UCX: set max level value to 60
 2018-11-27 09:51:09 -07:00
Sergey Oblomov
2d230b3aac OSC/UCX: set max level value to 60 
Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
 2018-11-27 14:20:28 +02:00
KAWASHIMA Takahiro
291d7654c5
Merge pull request #6030 from ggouaillardet/topic/mpiext_short_path 
mpiext: keep include path for extension short
 2018-11-27 20:59:01 +09:00
Yossi Itigin
39daf7a436
Merge pull request #6104 from hoopoepg/topic/oshmem-zero-len-coll 
OSHMEM: added processing of zero-length collectives
 2018-11-27 13:28:41 +02:00
Gilles Gouaillardet
cd199d0e12
Merge pull request #6122 from ggouaillardet/topic/MPI_XYZ_FN 
mpi/c: add back (some more) deprecated subroutines
 2018-11-27 14:44:28 +09:00
Gilles Gouaillardet
5a968306d6 mpi/c: add back (some more) deprecated subroutines 
- MPI_NULL_DELETE_FN
 - MPI_NULL_COPY_FN
 - MPI_DUP_FN

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
 2018-11-27 13:56:03 +09:00
Gilles Gouaillardet
27c25fa721 c: keep include path for extension short 
move openmpi/ompi/mpiext/FOO/c/mpiext_FOO_c.h to
openmpi/ompi/mpiext/FOO_c.h in order to use consistent
paths with mpif.h extensions

Refs. open-mpi/ompi#6019

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
 2018-11-27 11:21:05 +09:00
Gilles Gouaillardet
848a868f7b fortran/mpif-h: keep include path for extension short 
in order to cope with the 72 characters per line limit, move
openmpi/ompi/mpiext/FOO/mpif-h/mpiext_FOO_mpifh.h to
openmpi/ompi/mpiext/FOO_mpifh.h

Refs. open-mpi/ompi#6019

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
 2018-11-27 09:39:09 +09:00
Jeff Squyres
7be8a075ed
Merge pull request #6109 from ggouaillardet/topic/ompi_ext_fortran 
configury: fix auto-generated mpi-[f08-]ext-module.F90
 2018-11-26 18:11:25 -05:00
Jeff Squyres
8459d29738
Merge pull request #5979 from mkurnosov/coll-libnbc-cleanup 
coll/libnbc: remove debug output
 2018-11-26 18:10:10 -05:00
Jeff Squyres
dbe064af97
Merge pull request #5653 from bmwiedemann/userhost 
Allow to override build user and host
 2018-11-26 17:48:37 -05:00
Nathan Hjelm
5f1d956fe7
Merge pull request #6118 from bertwesarg/readd-depr-mpi20-symbols 
Re-add removed deprecate-only MPI-2.0 symbols
 2018-11-26 09:30:05 -07:00
Sergey Oblomov
c93927e27a OSHMEM/COLL/BCAST: removed unnecessary bcast call 
- removed unnecessary bcast call on zero-length request

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
 2018-11-26 16:53:48 +02:00
Bert Wesarg
b3f3281290 Re-add removed deprecate-only MPI-2.0 symbols 
See #6114

Signed-off-by: Bert Wesarg <bert.wesarg@tu-dresden.de>
 2018-11-26 14:00:05 +01:00
Yossi Itigin
e98ce2b36b
Merge pull request #6108 from yosefe/topic/pml-ucx-init-req_mpi_object 
pml_ucx: initialize req_mpi_object.comm for error handler
 2018-11-26 11:54:10 +02:00
KAWASHIMA Takahiro
829e4e78f7
Merge pull request #6111 from kawashima-fj/pr/update-pcoll-doc 
README & man: Update pcollreq documentation
 2018-11-26 18:26:58 +09:00
Sergey Oblomov
ff2fd0679e OSHMEM/COLL: optimization on zero-length ops 
- removed barrier call on zero-length operations

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
 2018-11-26 10:41:33 +02:00
KAWASHIMA Takahiro
5f0fcf0f45 README & man: Update pcollreq documentation 
The feature of persistent collectives is approved in the Sept. 2018
MPI Forum meeting and 2018 Draft Specification of the MPI standard is
published during SC18.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
 2018-11-26 17:27:43 +09:00
Gilles Gouaillardet
475d0355d7 configury: fix auto-generated mpi-[f08-]ext-module.F90 
prefer #include vs include in order to correctly handle long Fortran lines.
We use the full path, and it can be very long, this is why
it cannot be passed to the Fortran compiler.

Thanks Igor Andriyash and Axel Huebl for reporting this issue.

Refs open-mpi/ompi#6106

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
 2018-11-26 10:25:08 +09:00
Yossi Itigin
f36eeef4c5 pml_ucx: initialize req_mpi_object.comm for error handler 
without this fix, an error handler invoked on pml_ucx request would
segfault while trying to dereference requests[i]->req_mpi_object.comm

Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
 2018-11-25 19:37:54 +02:00
Sergey Oblomov
9de128afaf OSHMEM: added processing of zero-length collectives 
- according spec 1.4, annex C shmem collectives should process
  calls where number of elements is zero independently from pointer
  value
- added zero-count processing - it just call barrier to
  sync ranks

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
 2018-11-23 14:34:46 +02:00
Yossi Itigin
f05ebe82d3
Merge pull request #6096 from hoopoepg/topic/amo-int32-64-datatypes 
OSHMEM/AMO: added int/uint/32/64 atomics calls
 2018-11-22 11:21:17 +02:00
Yossi Itigin
ed967d867b
Merge pull request #6073 from hoopoepg/topic/set-osc-ucx-level-200 
OSC: set UCX module used by default
 2018-11-22 10:53:37 +02:00
Sergey Oblomov
4c071da565 OSHMEM/AMO: added int/uint/32/64 atomics calls 
- added int/uint/32/64 atomics calls
- added SHMEM_SYNC_SIZE macro

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
 2018-11-22 10:18:16 +02:00
Josh Hursey
3339e2aa33
Merge pull request #5986 from jjhursey/vpid-unpack 
Add OPAL_VPID to unpacking
 2018-11-21 11:42:02 -06:00
Jeff Squyres
748d8b6b4b
Merge pull request #6092 from jsquyres/pr/readme-updates 
README updates
 2018-11-20 13:25:19 -05:00
KAWASHIMA Takahiro
303d7842d9
Merge pull request #6074 from kawashima-fj/pr/remove-c99-type-check 
Remove `#if HAVE_[TYPE]` for types available in C99
 2018-11-20 11:42:13 +09:00
Jeff Squyres
ff44ca3fd2 README: Add a "quick start" section. 
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
 2018-11-17 03:28:39 -08:00