ports/openmpi
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Автор SHA1 Сообщение Дата
Ralph Castain
683efcb850 Rename the current opal_event_base to opal_sync_event_base in preparation for adding an async progress thread to opal. No functional changes made here - just a simple rename. 2015-07-11 10:08:19 -07:00
Ralph Castain
eb582b8276 Minor whitespace cleanups 2015-07-06 09:38:33 -07:00
Ralph Castain
836f49597d There is no reason for tools to have an async progress thread as they can loop the event library themselves. This has the added benefit of causing the tool to "block" while waiting for events so they don't use cpu. 
Also, fix orte-submit so it appropriately handles --help option
 2015-07-05 10:45:28 -07:00
Nathan Hjelm
4d92c9989e more c99 updates 
This commit does two things. It removes checks for C99 required
headers (stdlib.h, string.h, signal.h, etc). Additionally it removes
definitions for required C99 types (intptr_t, int64_t, int32_t, etc).

Signed-off-by: Nathan Hjelm <hjelmn@me.com>
 2015-06-25 10:14:13 -06:00
Ralph Castain
869041f770 Purge whitespace from the repo 2015-06-23 20:59:57 -07:00
Gilles Gouaillardet
e77d3057d6 orte-submit: fix a misc memory leak 
as reported by Coverity with CID 710651
 2015-06-17 11:17:54 +09:00
Gilles Gouaillardet
a80fda25d8 orte: rename the global variable component_map into orte_component_map 
Thanks @goodell for pointing this !
 2015-05-08 10:11:59 +09:00
Gilles Gouaillardet
2e384a3b65 initialize common symbols from orte 
A few uninitialized common symbols are remaining (generated by flex) :
 * orte/mca/rmaps/rank_file/rmaps_rank_file_lex.c: orte_rmaps_rank_file_leng
 * orte/mca/rmaps/rank_file/rmaps_rank_file_lex.c: orte_rmaps_rank_file_text
 * orte/util/hostfile/hostfile_lex.c: orte_util_hostfile_leng
 * orte/util/hostfile/hostfile_lex.c: orte_util_hostfile_text
 2015-05-08 10:11:58 +09:00
Ralph Castain
e8387fcf88 Protect tools that can never run in distributed mode from getting confused by PMI. 2015-04-20 15:42:57 -07:00
Ralph Castain
0e23f76eee Fix comment 2015-04-15 20:09:14 -06:00
Jeff Squyres
99754afd25 orterun.c: re-justify the output message text 
The type-A personality / english lit major in me compells me to
re-justify the text.  :-)
 2015-04-01 10:57:23 -07:00
Mike Dubman
58d002098b Merge pull request #474 from elenash/master 
Introduce -tune command line option to set env vars and mca params from ...
 2015-04-01 08:23:34 +03:00
Ralph Castain
b468f6a503 Okay, Jeff - use opal_setenv 2015-03-31 20:34:02 -07:00
Ralph Castain
e5d96417e7 Update warnings for run-as-root 2015-03-31 17:55:28 -07:00
Ralph Castain
41dd65d6cd Per Jeff's request, tone down the comments and "standardize" the warning 2015-03-31 17:54:54 -07:00
Ralph Castain
f04eb6a9c0 Extend the root-user protection to some more ORTE tools 2015-03-31 10:34:35 -07:00
Ralph Castain
f863147b05 Per the telecon and chat with Jeff, let root only do the version option without warning. Otherwise, require that the user specifically indicate allow-use-as-root 2015-03-31 10:34:35 -07:00
Ralph Castain
2fa56fb329 Ensure that orte-submit picks the correct ess module as it is -never- allowed to be used as a distributed tool 
Thanks to Mark Santcroos for diagnosing this one.
 2015-03-30 18:08:34 -07:00
Ralph Castain
2f365720b0 Allow root to request the version and help from mpirun without having to override the run-as-root protection. 
Thanks to Robert McLay for pointing this out
 2015-03-28 08:17:44 -07:00
Elena
90f5b2bb84 Introduce -tune command line option to set env vars and mca params from file 2015-03-26 18:33:53 +02:00
Ralph Castain
a013f3059f For scalability reasons, and to make life easier for the poor Cray-ites, don't bang on the system for the username - we'll just use the uid. 2015-03-19 21:24:13 -07:00
Jeff Squyres
a026456bef (orte|ompi|oshmem)*info tools: convert to opal_dl interface 
Noe that this commit removes option:lt_dladvise from the various
"info" tools output.  This technically breaks our CLI "ABI" because
we're not deprecating it / replacing it with an alias to some other
"into" tool output.

Although the dl/libltdl component contains an "have_lt_dladvise" MCA
var that contains the same information, the "option:lt_dladvise"
output from the various "info" tools is *not* an MCA var, and
therefore we can't alias it.  So it just has to die.
 2015-03-09 08:18:13 -07:00
Gilles Gouaillardet
4c0eb11e08 orterun: fix misc errors 
as reported by Coverity with CIDs 70700, 71039, 710651
 2015-03-09 11:57:18 +09:00
Gilles Gouaillardet
33841361c0 orte-clean: use pclose instead of fclose 
as reported by Coverity with CID 1287029
 2015-03-09 11:17:59 +09:00
Gilles Gouaillardet
4e7b5240e4 orte/tools: fix misc memory leaks 
as reported by Coverity with CIDs 70700, 71039, 71854, 72384 and 710651
 2015-03-05 14:06:18 +09:00
Jeff Squyres
4f54fedf05 orterun: ensure to set used_num_procs=true after finding that token 
This was CID 71687.
 2015-02-24 15:25:39 -05:00
Jeff Squyres
15be948d79 wrappers: *_EXTRA_INCLUDES does not exist any more 
There were a few places where *_EXTRA_INCLUDES (and derivates) were
still being used.  This commit removes all of them.
 2015-02-20 08:43:25 -08:00
Jeff Squyres
9b716d946e wrappers: fix errant @{libdir} reference in pkg-config files 
The RPATH support added a @{libdir} token into
<package>_WRAPPER_EXTRA_LDFLAGS.  However, these flags are also
substituted into the pkg-config data files, and they don't understand
the @{foo} notation.  So convert @{libdir} into ${libdir}, which
pkg-config *does* understand.

Thanks to Christoph Junghans (@junghans) for notifying us of the issue.

Fixes #406.
 2015-02-20 08:43:19 -08:00
Gilles Gouaillardet
8dc4f30fae orte/tools: fix NULL pointer dereference 
as reported by Coverity with CIDs 1196671 and 1196824
 2015-02-17 15:45:06 +09:00
Gilles Gouaillardet
8fe8079080 Fix a build failure when configure'd with --without-hwloc 
see http://mtt.open-mpi.org/index.php?do_redir=2235
 2015-02-16 10:31:09 +09:00
Jeff Squyres
3ac1d0dae5 *-info: add "lt_dladvise support" lines 2015-02-11 12:25:20 -08:00
Ralph Castain
ce56c0a2cf Oops - remove debug/exit 2015-02-11 10:14:06 -08:00
Ralph Castain
46fb850bb0 Continue adding support for options on orte-submit - still need to shift some of the MCA params to job object attributes 2015-02-10 13:56:14 -08:00
Ralph Castain
116fcaff2c Start adding support for cmd line options to orte-submit 2015-02-10 12:13:21 -08:00
rhc54
cf3f4def48 Merge pull request #386 from marksantcroos/master 
Add debug option to orte-dvm.

Looks fine - thanks
 2015-02-10 11:38:52 -08:00
Ralph Castain
df2cd96772 Display the local/global attribute flag more prominently. Mark the attributes as global in orte-submit so they will be communicated 2015-02-10 10:47:32 -08:00
Mark Santcroos
ff6a69a68d Add debug option to orte-dvm. 2015-02-10 13:02:23 -05:00
Ralph Castain
063e4c9989 Cleanup the pretty-print of odls cmds as some were missing. Add a new cmd to terminate the DVM, which the HNP will use to trun around and issue an xcast to the DVM. 2015-02-10 08:27:13 -08:00
Ralph Castain
3ae3b96c17 Fix master compilation - a buried header dependency must have been removed. 2015-02-10 07:22:10 -08:00
Ralph Castain
3478def791 Ensure that nodes get included in the nidmap when spawning a new DVM job - we really only need to do this once, but for now we do it for every job until we work out how to avoid the duplication. Remove debug from orte-dvm tool 2015-02-09 23:47:46 -05:00
Ralph Castain
ef13ba7db3 Add debug-daemons option to orte-dvm 2015-02-09 11:08:45 -05:00
Ralph Castain
2b0b012460 Continue refinement of the DVM operations. Send the spawn request to the right place (it helps) as it isn't a comm_spawn request and has to be treated a little differently. Ensure IO gets forwarded back to the tool. Ensure the tool outputs show_help locally as there is no place to send it. 2015-02-04 06:21:54 -08:00
Ralph Castain
7299cc3ab9 Cleanup the communications handshake so that orte-submit properly terminates upon job completion, and properly sends the terminate command to orte-dvm 2015-02-03 07:25:43 -08:00
Ralph Castain
4dba298e6e Update orte-submit manpage, add the ompi-* versions of orte-dvm and orte-submit manpages 2015-02-01 15:46:40 -08:00
Ralph Castain
e303a9b1d6 Provide an orte-dvm man page. Provide an option to orte-submit for terminating the DVM 2015-02-01 12:14:44 -08:00
Ralph Castain
ec5ccb76cf Enable persistent ORTE DVM so users can execute multiple OMPI jobs within an allocation without restarting the DVM every time. 2015-01-30 11:00:43 -08:00
Ralph Castain
028b00154d Complete implementation of the schizo framework to support OMPI component 2015-01-27 09:29:42 -06:00
Gilles Gouaillardet
661c35ca67 cleanup dead code caused by the removal of the --with-threads configure option 2015-01-16 19:13:59 +09:00
Mike Dubman
f83d6045aa ORTE: undeprecate -x var=val in mpirun 
mpirun -x var=val is back, actually it is useful alias for -mca mca_base_env_list "var=val"
 2014-11-12 10:51:15 +02:00
Ralph Castain
d0704ef118 Restore handling of physical processors in rankfiles. Note that the prior implementation was likely incorrect as it falsely assumed that physical core indices were unique, which isn't always true. Stipulate that physical rankfiles can only include PU numbers, and bind the result to the core that contains that physical PU. Update the mpirun man page to cover the new use-case. 2014-11-10 14:00:40 -08:00