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Автор SHA1 Сообщение Дата
Joshua Hursey
29b49351af ras/lsf: Fix affinity for MPMD jobs running under LSF 2016-04-22 11:18:34 -05:00
Ralph Castain
c2c59db49c Add Mark Santcroos to AUTHORS - welcome, Mark! 2016-04-21 10:54:40 -07:00
Jeff Squyres
5892020238 Merge pull request #1568 from jsquyres/pr/make-symbol-check-only-on-git-clones 
Makefile.am: only check for common symbols on dev builds
 2016-04-20 17:13:25 -04:00
Jeff Squyres
62c45e4a09 Makefile.am: only check for common symbols on dev builds 
Only run "find_common_syms" in the install-exec-hook when a .git
directory is present in the source dir.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
 2016-04-20 12:58:16 -07:00
Jeff Squyres
68c1a5eb6c Merge pull request #1567 from jsquyres/pr/fix-ompi-to-opal-name-conversion 
m4: rename OMPI_SUMMARY_* macros to OPAL_SUMMARY_*
 2016-04-20 13:10:06 -04:00
Nathan Hjelm
a40018c639 Merge pull request #1566 from hjelmn/new_hooks_update 
memory/patcher: do not hook madvise if the syscall doesn't exist
 2016-04-20 10:35:44 -06:00
Jeff Squyres
6800ef9ec0 m4: rename OMPI_SUMMARY_* macros to OPAL_SUMMARY_* 
These macros should really be named OPAL_SUMMARY_*; they're used in
all projects, and therefore should be in the lowest later project (OPAL).

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
 2016-04-20 08:40:00 -07:00
Nathan Hjelm
db854c368a memory/patcher: do not hook madvise if the syscall doesn't exist 
Fixes open-mpi/ompi#1565

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2016-04-20 09:18:31 -06:00
Joshua Ladd
0d5a57d9d3 Merge pull request #1558 from vspetrov/hcoll_complex_dtype_support 
Adds mapping to hcoll complex data type
 2016-04-20 08:35:33 -04:00
Gilles Gouaillardet
490b538ad6 ompi/datatype: fix MPI_LONG_LONG_INT type name 
MPI_LONG_LONG_INT is a named predefined datatype, so its name is now MPI_LONG_LONG_INT
MPI_LONG_LONG is a synonym of MPI_LONG_LONG_INT, and its name is also MPI_LONG_LONG_INT
 2016-04-20 09:34:20 +09:00
Nathan Hjelm
fdd1ff7c29 Merge pull request #1562 from hjelmn/opal_coverity 
mca/base: fix coverity issue
 2016-04-19 14:29:05 -06:00
Nathan Hjelm
3f15d442de Merge pull request #1561 from hjelmn/mpool_rewrite 
rcache/base: add missing file to tarball
 2016-04-19 12:00:06 -06:00
Nathan Hjelm
b3abd5380b Merge pull request #1560 from hjelmn/new_hooks_update 
Patcher hooks bug fixes
 2016-04-19 11:39:30 -06:00
Nathan Hjelm
16c28399cd rcache/base: add missing file to tarball 
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2016-04-19 11:03:38 -06:00
Nathan Hjelm
d981a9fc7d patcher/overwrite: fix compile error on x86 
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2016-04-19 10:16:39 -06:00
Nathan Hjelm
5bc9d9d1f8 patcher/linux: fix compiler warnings 
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2016-04-19 10:16:20 -06:00
Nathan Hjelm
1147fb3dd1 patcher/linux: ensure component is only enabled on Linux 
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2016-04-19 10:16:00 -06:00
Valentin Petrov
21f1c572c0 Adds mapping to hcoll complex dte 2016-04-19 14:14:28 +03:00
Nathan Hjelm
178c97b406 Merge pull request #1557 from hjelmn/new_hooks_update 
memory/patcher: munmap hook could be called from within a malloc() implementation
 2016-04-18 17:29:05 -06:00
Nathan Hjelm
a8e90e8796 memory/patcher: munmap hook could be called from within a malloc() implementation 
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2016-04-18 15:00:07 -06:00
Nathan Hjelm
95c06cf959 Merge pull request #1556 from hjelmn/opal_coverity 
memory/patcher: fix coverity warning
 2016-04-18 14:55:28 -06:00
Joshua Ladd
1c6218804b Merge pull request #1542 from igor-ivanov/pr/oshmem-spec1.3 
Pr/oshmem spec1.3
 2016-04-18 15:22:48 -04:00
Nathan Hjelm
7f271171f6 memory/patcher: fix coverity warning 
Fix CID 1358512:  Error handling issues  (NEGATIVE_RETURNS):

C libraries usually handle read (-1, ...) fine but it is safer to
avoid calling read with a negative handle. Added negative file
descriptor check.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2016-04-18 11:29:20 -06:00
Igor Ivanov
75050b44a2 oshmem: Align OSHMEM API with spec v1.3 (extension api changes) 
openshmem.org specification does not mention about extension api
but there is an agreemnet to do these changes for related ex api too.
see
Annex G:
Version 1.3
Added const to every read-only pointer argument
 2016-04-18 19:38:16 +03:00
Igor Ivanov
157f81b699 oshmem: Align OSHMEM API with spec v1.3 (Added const to every read-only pointer argument) 
Annex G:
Version 1.3
Added const to every read-only pointer argument
 2016-04-18 19:25:31 +03:00
Igor Ivanov
c02d0b7161 oshmem: Align OSHMEM API with spec v1.3 (shmem_lock change signature) 
Annex G:
Version 1.3
Added volatile to remotely accessible pointer argument in
SHMEM_LOCK
See Sections 8.9.1
 2016-04-18 19:25:18 +03:00
Igor Ivanov
a52b0797fc oshmem: Align OSHMEM API with spec v1.3 (shmem_wait change signature) 
Annex G:
Version 1.3
Added volatile to remotely accessible pointer argument in SHMEM_WAIT
See Sections 8.7.1
 2016-04-18 19:24:55 +03:00
Gilles Gouaillardet
d96919638f pmix: remote autogenerated file and update .gitignore 
removed: opal/mca/pmix/pmix114/pmix/src/include/private/autogen/config.h.in
 2016-04-18 12:57:41 +09:00
rhc54
2be790447a Merge pull request #1554 from rhc54/topic/114update 
Roll to PMIx 1.1.4rc2 - replaces some code that was incorrectly remov…
 2016-04-16 19:35:38 -07:00
Ralph Castain
b009e58d25 Roll to PMIx 1.1.4rc2 - replaces some code that was incorrectly removed in prior update 2016-04-16 18:24:24 -07:00
rhc54
8cce6df688 Merge pull request #1553 from rhc54/topic/114update 
Update to official PMIx 1.1.4rc1
 2016-04-16 17:31:19 -07:00
Ralph Castain
8ff114e668 Update to official PMIx 1.1.4rc1 2016-04-15 21:47:46 -07:00
rhc54
fde5183f90 Merge pull request #1550 from rhc54/topic/jeff 
Per request from Jeff, aggregate all help messages during MPI_Init th…
 2016-04-15 16:50:13 -07:00
Ralph Castain
7829fbdc29 Per request from Jeff, aggregate all help messages during MPI_Init thru MPI_Finalize as long as the RTE is available 2016-04-15 13:37:22 -07:00
rhc54
6b38c0e1ef Merge pull request #1548 from rhc54/topic/pmix114 
Roll to PMIx 1.1.4rc1 and remove the PMIx 1.2.0 directory...
 2016-04-15 12:55:15 -07:00
Ralph Castain
449ec41532 Roll to PMIx 1.1.4rc1 and remove the PMIx 1.2.0 directory as the community has decided to not do that release version. This incorporates a number of bug fixes that have been identified and repaired in the PMIx and OMPI code bases. Also includes several minor corrections to the PMIx code so it now supports run-thru without hanging on collectives involving a process that exits 2016-04-15 10:11:11 -07:00
KAWASHIMA Takahiro
e854404570 fortran: Change the line order of #pragma 
No code change.
These lines were introduced in my recent commit 17d32ac.
I had a editing mistake and the order is different from
other lines/files.
 2016-04-15 12:49:03 +09:00
Nathan Hjelm
3245428e82 Merge pull request #1535 from kawashima-fj/pr/osc-pt2pt-header-fix 
osc/pt2pt: Fix a struct name typo
 2016-04-14 15:55:25 -06:00
Jeff Squyres
4566286b9a Merge pull request #1538 from kawashima-fj/pr/fortran-binding-fix 
fortran: Fix many Fortran binding bugs
 2016-04-14 17:18:59 -04:00
Nathan Hjelm
330302c4b4 Merge pull request #1534 from kawashima-fj/pr/parallel-rma-fix 
osc/pt2pt: Fix tag conflicts on parallel RMA communications
 2016-04-14 15:13:32 -06:00
Jeff Squyres
fdf33674b3 Merge pull request #1532 from kmroz/wip-hindexed-cleanup-1 
romio,java: cleanup deprecated hindexed call
 2016-04-14 17:07:31 -04:00
Jeff Squyres
2374d8fcf7 Merge pull request #1536 from kawashima-fj/pr/inplace-fix 
mpi/c, mpi/fortran: Fix `MPI_IN_PLACE`-related bugs
 2016-04-14 15:56:55 -04:00
Nathan Hjelm
b4e5b5c09e Merge pull request #1531 from hjelmn/bml 
bml: always enable the bml
 2016-04-14 10:22:33 -06:00
Nathan Hjelm
4d9c047f04 Merge pull request #1546 from hjelmn/mpool_rewrite 
rcache: add missing file
 2016-04-14 10:22:09 -06:00
Nathan Hjelm
9046424be5 rcache: add missing file 
Fixes #1545

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2016-04-14 09:21:09 -06:00
rhc54
d76f0ba2a8 Merge pull request #1543 from rhc54/topic/oversub 
Ensure that we exit with a non-zero status when oversubscribe fails
 2016-04-14 07:11:24 -07:00
Ralph Castain
4b3995dd27 Trivial change to silence warning 2016-04-14 05:54:02 -07:00
Ralph Castain
1fa236b26c Ensure that we exit with a non-zero status when oversubscribe fails 2016-04-14 05:51:10 -07:00
Nathan Hjelm
1e6b4f2f55 Merge pull request #1495 from hjelmn/new_hooks 
Add new patcher memory hooks
 2016-04-13 18:19:23 -06:00
Nathan Hjelm
c2b6fbb124 opal/memory: move initialization to first rcache creation 
Because of the removal of the linux memory component it is no longer
necessary to initialize the memory component in opal_init(). This
commit moves the initialization to the creation of the first rcache
component.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2016-04-13 17:21:46 -06:00