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Joshua Ladd
b3c6b0629c Clean up sshmem/mmap error messages. This should be added to
cmr=v1.7.5:ticket=4432

This commit was SVN r31180.

The following Trac tickets were found above:
  Ticket 4432 --> https://svn.open-mpi.org/trac/ompi/ticket/4432
2014-03-20 18:22:12 +00:00
Mike Dubman
aa4775b021 OSHMEM: better error handling for sshmem/mmap
Refs trac:4399

fixed by Roman, reviewed by Miked

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r31179.

The following Trac tickets were found above:
  Ticket 4399 --> https://svn.open-mpi.org/trac/ompi/ticket/4399
2014-03-20 16:47:42 +00:00
Jeff Squyres
e5504859d2 Follow on to r31172: improve the help message
* Show the help message for all errors, not just EINVAL
* Put the help message in the correct helpfile
* Fix grammar and spelling, and expand the help message

cmr=v1.7.5:ticket=trac:4431

This commit was SVN r31173.

The following SVN revision numbers were found above:
  r31172 --> open-mpi/ompi@3e51d28b97

The following Trac tickets were found above:
  Ticket 4431 --> https://svn.open-mpi.org/trac/ompi/ticket/4431
2014-03-20 14:51:56 +00:00
Joshua Ladd
3e51d28b97 This commit adds a help message when system limitations prevent setting up OSHMEM's symmetric heap. This fixes trac:4399 and should be added to
cmr=v1.7.5:reviewer=jsquyres

This commit was SVN r31172.

The following Trac tickets were found above:
  Ticket 4399 --> https://svn.open-mpi.org/trac/ompi/ticket/4399
2014-03-20 14:42:25 +00:00
Mike Dubman
d8288fa39d OSHMEM: Fix call prepare_src with a NULL endpoint
see issue: https://svn.open-mpi.org/trac/ompi/ticket/4399

Refs trac:4399

fixed by Igor, reviewed by Alex
cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r31168.

The following Trac tickets were found above:
  Ticket 4399 --> https://svn.open-mpi.org/trac/ompi/ticket/4399
2014-03-20 13:11:25 +00:00
Mike Dubman
9314e9f0a3 OSHMEM: Fix mmap compatibility issue
Using MAP_ANONYMOUS brings different interpretation of fd, offset arguuments of mmap()
Linux:
The mapping is not backed by any file; the fd and offset arguments are ignored.
Mac:
Map anonymous memory not associated with any specific file.  The offset argument is
ignored.  Mac OS X specific: the file descriptor used for creating MAP_ANON regions
can be used to pass some Mach VM flags, and can be specified as -1 if no such flags
are associated with the region
FreeBSD:
Map anonymous memory not associated with any specific file.  The file
descriptor used for creating MAP_ANON must be -1.  The offset   argument must be 0.

fixed by Igor, reviewed by Mike

Refs trac:4399

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r31140.

The following Trac tickets were found above:
  Ticket 4399 --> https://svn.open-mpi.org/trac/ompi/ticket/4399
2014-03-19 07:05:40 +00:00
Mike Dubman
84a6330b27 OSHMEM: SHMEM_API_ macro fix
The verbose level was initialized too early
group shmem mca params together

fixed by Roman, reviewed by Igor/Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r31107.
2014-03-18 15:07:04 +00:00
Jeff Squyres
616e62bb9e Fix --enable|disable-oshmem configure switch
* Fixed the AC_ARG_ENABLE for the oshmem option.
* Fixed the AM_CONDITIONALs values for the projects.
* Re-added (and slightly simplified) the use of PROJECT_OSHMEM in
  various Makefile.am's to disable building OSHMEM stuff

Submitted by Jeff, reviewed and approved by Ralph.

cmr=v1.7.5:reviewer=ompi-gk1.7

This commit was SVN r31062.
2014-03-13 21:23:04 +00:00
Jeff Squyres
16cab57ec5 Fix some set-but-not-used compiler warnings.
cmr=v1.8:reviewer=miked

This commit was SVN r31061.
2014-03-13 21:20:36 +00:00
Ralph Castain
7869402f5f Sigh - looks like I did too good a job of turning things off. Back some of it out in favor of trying again when more time is available
Refs trac:4368

This commit was SVN r31017.

The following Trac tickets were found above:
  Ticket 4368 --> https://svn.open-mpi.org/trac/ompi/ticket/4368
2014-03-12 02:10:35 +00:00
Ralph Castain
9c66c4f439 Correctly implement --disable-oshmem and --without-orte so we don't build the disabled section of code. Fix a bunch of code rot in the PMI rte component, and add several missing headers when building --without-orte.
NOTE: I transferred the oshmem-disabled-by-default from the 1.7 branch to the trunk to minimize future disruption if/when we change that option.

cmr=v1.8:reviewer=jsquyres

This commit was SVN r31006.
2014-03-11 22:02:40 +00:00
Jeff Squyres
6c5c125e28 Per discussion with Josh Ladd, remove this dead man page code.
The code is not used anywhere, so let's remove it until there are some
man pages to install.

Submitted by Jeff Squyres, reviewed by Josh Ladd.

cmr=v1.7.5:reviewer=ompi-gk1.7:subject=remove oshmem dead man page code

This commit was SVN r31002.
2014-03-11 20:47:43 +00:00
Mike Dubman
c195118959 OSHMEM: Fix issue 'OSHMEM passing endpoint==NULL to BTL prepare_src()'
fixed by Igor, reviewed by Miked

fixes trac:4359

This commit was SVN r30996.

The following Trac tickets were found above:
  Ticket 4359 --> https://svn.open-mpi.org/trac/ompi/ticket/4359
2014-03-11 18:00:32 +00:00
Mike Dubman
ec3957ddde OSHMEM: fix cleanup
add proper cleanup for sysv shmem segments
fixed by Igor, reviewed by Miked

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30987.
2014-03-11 13:19:37 +00:00
Mike Dubman
c784aab7d8 OSHMEM: scoll fix corner cases
- fix segv
- proper enable/disable and prio handling

fixed by Elena, reviewed by Igor/Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30962.
2014-03-07 12:31:29 +00:00
Mike Dubman
2828afddce OSHMEM: fix output, lower prio for scoll/mpi
fixed by Roman/Elena, reviewed by Igor/Mike

cmr=v1.7.5:revewer=ompi-rm1.7

This commit was SVN r30957.
2014-03-06 16:17:58 +00:00
Mike Dubman
1657d6047c OSHMEM: fix warnings
Thanks to Jeff for spotting.

fixed by Igor, reviewed by Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30951.
2014-03-06 11:14:00 +00:00
Mike Dubman
361f15d5d7 OSHMEM: fix use of opal_verbose
fixed by Roman, reviewed by Igor/Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30943.
2014-03-05 08:49:14 +00:00
Mike Dubman
1f69e2d588 OSHMEM: fix warn in macro
fixed by Elena, reviewed by Igor/Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30897.
2014-03-01 07:54:48 +00:00
Mike Dubman
d584869dda OSHMEM: memheap mkey exchange fix
fix situations where cluster nodes can have different btls

Fixed by Roman, reviewed by Igor, Mike
cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30877.
2014-02-27 14:02:30 +00:00
Mike Dubman
e466fee747 OSHMEM: memheap framework fix warn, remove verbs deps
fixed by Igor, reviewed by Miked

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30874.
2014-02-27 07:22:57 +00:00
Joshua Ladd
d1baf3f00c Stop linking in verbs stuff in oshmem/mca/memheap/base now that we have the sshmem framework.
Refs trac:4261

This commit was SVN r30858.

The following Trac tickets were found above:
  Ticket 4261 --> https://svn.open-mpi.org/trac/ompi/ticket/4261
2014-02-26 20:28:47 +00:00
Mike Dubman
4572bd58e5 OSHMEM: fix bug in scoll/mpi, add fortran support
dtypes support to oshmem scoll mpi. added comment to
oshmem scoll mpi component regarding casting size_t to int.

Fixed by Elena, Reviewed by Igor/Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30856.
2014-02-26 17:06:44 +00:00
Mike Dubman
323e4418b9 OSHMEM: extract memheap allocate methods into separate framework
- similar to opal/shmem
- next step is some refactoring and merge into opal/shmem
 Developed by Igor, reviewed by AlexM, MikeD

This commit fixes trac:4261.

This commit was SVN r30855.

The following Trac tickets were found above:
  Ticket 4261 --> https://svn.open-mpi.org/trac/ompi/ticket/4261
2014-02-26 16:32:23 +00:00
Ralph Castain
fbeb0cac10 Silence warning
cmr=v1.7.5:reviewer=ompi-gk1.7

This commit was SVN r30828.
2014-02-25 23:50:12 +00:00
Joshua Ladd
a0a850a77b Fixing warnings in oshmem/mca/scoll/mpi.
Refs trac:4302

This commit was SVN r30824.

The following Trac tickets were found above:
  Ticket 4302 --> https://svn.open-mpi.org/trac/ompi/ticket/4302
2014-02-25 21:24:15 +00:00
Mike Dubman
202bf90287 OSHMEM: ikrit optimization
no need pre-register heap if MXM/ud is used
fixed by Alex, reviewed by Miked

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30809.
2014-02-25 15:03:53 +00:00
Mike Dubman
180e4f06bf OSHMEM: add support for MPI collectives
oshmem collective can select MPI collectives modules as provider.

Developed by Elena, reviewed by Miked

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30808.
2014-02-25 15:01:10 +00:00
Mike Dubman
5ed50793d5 OSHMEM: misc ikrit/mxm enhancements
- fix mxm/tl selection logic
- do not require memory registration if mxm/ud was selected

fixed by Alex, reviewed by Miked

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30802.
2014-02-24 07:06:57 +00:00
Mike Dubman
ffee1e0424 oshmem: roll back scoll/fca use shmem barrir
have issue, rolling back

fixed by Elena, reviewed by Miked

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30788.
2014-02-21 11:40:31 +00:00
Mike Dubman
684e78e669 OSHMEM: OOM in yoda
fix: do not fail on blm allocation error, wait for some puts to complete and retry

fixed by Roman, reviewed by Mike/Alex
cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30779.
2014-02-20 09:53:32 +00:00
Mike Dubman
49ee63f4b8 MXM: do not enforce version check
- MXM uses libtool versioning scheme which is enough, no need additional in OMPI

reviewed by yossi

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30768.
2014-02-18 19:44:37 +00:00
Mike Dubman
982149d8c8 OSHMEM: various fixes
1. fix in oshmem scoll component: basic algorithms should
   call basic collectives since their implementation
   incompatible with others (fca, hcoll).

2. Set OPAL_EVLOOP_ONCE flag ON for libevent in the case 
   of yoda smpl. Otherwise there is possible deadlock in 
   atomic_basic_lock call

fixed by Val, Igor, reviewed by Miked

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30762.
2014-02-18 15:07:03 +00:00
Mike Dubman
fe692eb107 OSHMEM: remove unused code, rename mca param
- remove old, unused code
- rename mca param for oshmem preconnect to match mpi naming scheme.

fixed by Alex, reviewed by Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30748.
2014-02-17 14:57:12 +00:00
Mike Dubman
96142b31bd shmem: remove unused defines
fixed by Roman, reviewed by MikeD
cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30735.
2014-02-15 06:43:08 +00:00
Mike Dubman
608269ed72 fca: support relocation of fca packages to opal_prefix/../fca
reviewed by AlexM
cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30728.
2014-02-14 14:49:41 +00:00
Ralph Castain
f7abaee8c4 Some windows cleanups - thanks to Marco Atzeri for the patch
cmr=v1.7.5:reviewer=miked

This commit was SVN r30720.
2014-02-13 23:59:39 +00:00
Mike Dubman
732f108ae4 OSHMEM: fix segv on finalize with spml/yoda
avoid double call to bml
fixed by AlexMa, reviewed by AlexM and MikeD

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30715.
2014-02-13 04:42:19 +00:00
Jeff Squyres
b4effd200f Remove num_pes,my_pe declarations from shmem.fh.
The openshmem test suite
(http://bongo.cs.uh.edu/site/sites/default/site_files/openshmem-test-suite-release-1.0d.tar.bz2)
declares num_pes and my_pe in each Fortran test file -- it apparently
doesn't expect shmem.fh to declare these functions.  Sigh.

cmr=v1.7.5:reviewer=miked:subject=the openshmem community is crazy

This commit was SVN r30660.
2014-02-11 01:36:26 +00:00
Mike Dubman
28949efcaf OSHMEM: MXM2: a2a perf improvement on large scale
Allow only limited number of coonections to have 'puts'
that do not require remote completion ack. That will
greatly improve performance of shmem_fence()/shmem_quiet()
and shmem_barrier() when there are many active connections.

fixed by Alex, reviewed by Miked

Refs trac:3763

This commit was SVN r30573.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-02-06 08:42:45 +00:00
Mike Dubman
27a763c86c OSHMEM: finalization fixes
Fixes mxm endpoint destruction and hung during
SHMEM finalization.

Add a barrier between spml del procs and finalization.
Not having it caused hungs because ikrit spml can not properly
disconnect if its peer already finizalized.

Refs trac:3763

This commit was SVN r30572.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-02-06 08:40:43 +00:00
Jeff Squyres
b7d10b3499 Remove some unused AC_DEFINE's, and also remove a redundant AC_DEFINE
This commit was SVN r30564.
2014-02-05 12:24:02 +00:00
Mike Dubman
7e5031374e OSHMEM: Apply Jeff`s comments to fortran configure logic
Refs trac:3763

This commit was SVN r30530.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-02-03 09:47:56 +00:00
George Bosilca
489f093b59 It didn't compile. Cleanup a little the headers inclusion.
This commit was SVN r30473.
2014-01-29 14:30:55 +00:00
Mike Dubman
30e1e49a9e OSHMEM: refactoring to reuse common functions from different components.
This is preparation for moving verbs dependent code out from memheap/base component

Refs: #3763

This commit was SVN r30454.
2014-01-28 07:30:36 +00:00
Mike Dubman
ffe662c98e OSHMEM: use shmem barrier instead of internal
Refs: 3763

This commit was SVN r30427.
2014-01-25 07:49:56 +00:00
Mike Dubman
59d4bb662c OSHMEM: rework fortran support detection
fix the case, to enable oshmem-fortran when "with-shmem" was specified and "ompi-fortran" was enabled and happy.

fixed by Roman, reviewed by Miked

Refs trac:3763

This commit was SVN r30391.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-23 07:49:13 +00:00
Mike Dubman
0d8424e0a6 OSHMEM: Fixes issue with recent segfault in finalize related to mca_base_group_unselect.
We need to explicitly call mca_base_group_unselect in finalize
for each group that are not freed with oshmem_group_cache_list_free before we unloading scoll framework.

Refs trac:3763

This commit was SVN r30311.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-17 16:57:12 +00:00
Mike Dubman
b7750ccbf4 OSHMEM: bml initialization is moved into ompi_init
it fixes race of mca_var segfault in finalization of shmem

based on this thread:
http://www.open-mpi.org/community/lists/devel/2014/01/13778.php

Refs trac:3763

fixed by Igor, reviewed by Brian

This commit was SVN r30304.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-17 06:09:29 +00:00
Mike Dubman
9f5abfb233 OSHMEM: fix fortran selection logic and refactoring
refactoring inspired by this thread: http://www.open-mpi.org/community/lists/devel/2014/01/13744.php
fix oshmem fortran selection logic, Thanks to Paul for info
Refs trac:3763

This commit was SVN r30286.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-14 13:23:44 +00:00