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Автор SHA1 Сообщение Дата
Mike Dubman
55e35e0f6e OSHMEM: Fix issue with incorrect mca variables registration 
Few components had wrong mca variables registration procedure
List of them:
- atomic basic and mxm
- spml yoda and ikrit
Two mca variables as runtime_api_verbose and runtime_lock_recursive change
names to oshmem_api_verbose and oshmem_lock_recursive otherwise they
were not shown by oshmem_info tool.

fixed by Igor, reviewed by Miked
cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31962.
 2014-06-06 17:36:47 +00:00
Oscar Vega-Gisbert
cc219218a7 Java: update javadoc's install locations 
This commit was SVN r31914.
 2014-06-01 15:40:14 +00:00
Oscar Vega-Gisbert
748d02e963 Java-oshmem: remove some 'len' parameters, new 'slice' methods, new class PSync 
This commit was SVN r31912.
 2014-06-01 15:06:35 +00:00
Mike Dubman
f2b4e5b156 OSHMEM: add compat to prev mxm version 
fixed by ROman, reviewed by MikeD

Refs: #4672

This commit was SVN r31881.
 2014-05-22 10:03:02 +00:00
Mike Dubman
d9d5dd701b OSHMEM: fix - use real mkey for atomics for rc/dc 
fixed by Roman, reviewed by Vasily

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31878.
 2014-05-22 05:58:22 +00:00
Mike Dubman
5dd4c68a0f OSHMEM: use bulk connect/disconnect API 
fixed by Yossi, reviewed by MikeD

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31856.
 2014-05-21 08:00:21 +00:00
Oscar Vega-Gisbert
1f017344ad Java-oshmem: replace Addr.offset/duplicate by slice 
This commit was SVN r31843.
 2014-05-20 21:12:39 +00:00
Oscar Vega-Gisbert
d42f03eb1f OSHMEM: rename atomic fetch&inc from 'pshmem_*' to 'shmem_*' 
This commit was SVN r31842.
 2014-05-20 20:45:07 +00:00
Mike Dubman
a7cec59ec3 OSHMEM: missing APIs are back and can be used. 
fixed by Roman, reviewed by MikeD

This commit was SVN r31840.
 2014-05-20 20:11:41 +00:00
Jeff Squyres
f8e37be1a9 oshmem/java: Add missing file to Makefile.am 
cmr=v1.8.2:reviewer=osvegis

This commit was SVN r31837.
 2014-05-20 16:32:41 +00:00
Mike Dubman
6839f08159 OSHMEM: fix warning 
fixed by Igor, reviewed by MikeD

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31832.
 2014-05-20 05:52:31 +00:00
Mike Dubman
7c1eb0aad9 OSHMEM: fix for devices which do not support sharedmr 
disqualify itself and use next allocator

fixed by Igor, reviewed by MikeD

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31823.
 2014-05-19 17:59:49 +00:00
Mike Dubman
5d76d30550 OSHMEM: add missing prototypes and remove unused functions 
fixed by Roman, reviewed by MikeD

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31819.
 2014-05-19 13:34:53 +00:00
Mike Dubman
1f972737d4 OSHMEM: optimize print to spend less of formatting when not needed 
fixed by Roman, reviewed by Miked
cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31818.
 2014-05-19 13:32:32 +00:00
Mike Dubman
d531a2ccad OSHMEM: Fix deadlock for collect operation using various data sizes. 
Deadlock when using the shmem_collect32()/shmem_collect64() routines and any of the non-root PEs pass 0 as the number of elements.
Algorithm in _algorithm_central_collector() does use 0 as a special value, and thus does not break out of the loop.

fixed by IgorI, reviewed by MikeD

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31814.
 2014-05-19 06:17:53 +00:00
Ralph Castain
63d7ba6b25 Missed one instance of top_builddir 
This commit was SVN r31812.
 2014-05-19 04:18:29 +00:00
Ralph Castain
6f1320d5cd Cleanup the mess from r31810 - no way that could compile or avoid breaking the trunk. The Makefile's had to be added to oshmem_config_files.m4, and the Makefile.am's had not been updated to the new srcdir/builddir conventions. Also add svn:ignores 
This commit was SVN r31811.

The following SVN revision numbers were found above:
  r31810 --> open-mpi/ompi@83bdebbf81
 2014-05-19 04:14:54 +00:00
Oscar Vega-Gisbert
83bdebbf81 Java bindings for OSHMEM. 
This commit was SVN r31810.
 2014-05-18 21:48:09 +00:00
Mike Dubman
747ad77a97 OSHMEM: refactor to fully comply to the OpenSHMEM spec and fix some proto 
fixed by Roman, reviewed by Miked

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31808.
 2014-05-17 19:47:30 +00:00
Mike Dubman
95e637f5ba OSHMEM: fix error message when aborting on OOM 
fixed by Roman, reviewed by Miked

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31752.
 2014-05-14 13:45:16 +00:00
Mike Dubman
644aa6f737 OSHMEM: add missing profiling API for shmem_finalize 
fixed by Roman, reviewed by Miked
cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31751.
 2014-05-14 13:13:30 +00:00
Ralph Castain
5602156a1c Use the correct abstraction layer name for the data dirs 
This commit was SVN r31684.
 2014-05-08 14:32:24 +00:00
Ralph Castain
11faab1091 The final step of the RFC: convert the <foo>libdir and friends to fit their respective code areas, and equate them all at the top. Note that we can't entirely separate things as the opal_install_dirs framework can't handle separated locations for the various trees. 
This commit was SVN r31679.
 2014-05-08 02:01:35 +00:00
Ralph Castain
a8e2d6c3a6 The bulk of the remaining renaming changes, in one final glorious "blob". Thanks to Jeff for some help chasing down a few spots. Per chat with Jeff, we decided to cleanup a few things that were historical in nature: 
top_ompi_srcdir  ->  OMPI_TOP_SRCDIR
top_ompi_builddir -> OMPI_TOP_BUILDDIR

We also split the srcdir/builddir flags according to their local tree (e.g., OPAL_TOP_SRCDIR), and tied them all together in configure.ac. Renamed ompi_ignore and ompi_unignore to be opal_<foo> as these are agnostic markers.

Only thing left is ompilibdir being treated similar to what we dif for srcdir/builddir. Coming soon.

This commit was SVN r31678.
 2014-05-07 21:48:53 +00:00
Ralph Castain
27faf2684a Update architecture names in OSHMEM branch 
This commit was SVN r31673.
 2014-05-07 14:40:49 +00:00
Mike Dubman
cd1f64b941 OSHMEM: Adding missing include for OSHMEM changes necessary to support Java bindings 
fixed by Roman, reviewed by Mike

This commit was SVN r31672.
 2014-05-07 11:53:18 +00:00
Alex Mikheev
253f2d51ef OSHMEM: use request pool for ondemand mkey exchange 
Use pool of 16 requests instead of single one
cmr=v1.8.2:reviewer=ompi-rm1.8
reviewed by miked

This commit was SVN r31628.
 2014-05-04 14:28:56 +00:00
Alex Mikheev
c29d426153 OSHMEM: fixes mxm rc transport mkey ecxhange 
cmr=v1.8.2:reviewer=ompi-rm1.8
reviewed by miked

This commit was SVN r31627.
 2014-05-04 14:26:54 +00:00
Joshua Ladd
7b97da5163 Adding missing include for OSHMEM changes necessary to support Java bindings. 
This commit was SVN r31605.
 2014-05-02 16:14:05 +00:00
Mike Dubman
e369e5f49b OSHMEM: fix compiler warn 
fixed by Roman, reviewed by Miked

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31565.
 2014-04-30 12:05:03 +00:00
Mike Dubman
ff42999037 OSHMEM: Added missing API for Java bindings (int16/32/64 stuff) 
fixed by Roman, reviewed by Mike

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31564.
 2014-04-30 12:03:23 +00:00
Mike Dubman
0cba0b95b8 OSHMEM: fortran profiling API added 
for spec compliance 

fixed by Roman, reviewed by Igor/Miked

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31510.
 2014-04-23 18:56:37 +00:00
Mike Dubman
7c47aab927 OSHMEM: fix segv with new OFED 
new OFED changed struct layout and static assignment caused segv.
detect struct new layout and use dynamic assignment

fixed by AlexM, reviewed by Miked

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31502.
 2014-04-23 11:38:44 +00:00
Mike Dubman
8e4cea59da OSHMEM: bug fix for hca selection from list 
fixed by AlexM, reviewed by Miked

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31501.
 2014-04-23 11:32:52 +00:00
Mike Dubman
18f9a282d5 OSHMEM: fix clang warnings 
fixed by Roman, reviewed by Miked

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31486.
 2014-04-22 16:49:20 +00:00
Mike Dubman
471652f2bf OSHMEM: some autogenerated files should be static 
fixed by Roman, reviewed by Igor/Mike

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31451.
 2014-04-19 05:23:04 +00:00
Mike Dubman
faaaac3194 OSHMEM: compilation fix for pathscale 5.0 and pshmem API 
fixed by Roman, reviewed by Igor/Mike

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r31450.
 2014-04-19 05:09:07 +00:00
Mike Dubman
f9e813a003 OSHMEM: revert r31412, it did not pass jenkins 
This commit was SVN r31414.

The following SVN revision numbers were found above:
  r31412 --> open-mpi/ompi@b0ade11ae4
 2014-04-16 20:00:34 +00:00
Mike Dubman
b354dc92f2 OSHMEM: align with OSHMEM SPEC v1.0 
- add some missing APIs
- change signature od shmem_finalize to comply with SGI spec

fixed by Roman, reviewed by Igor/Miked

Refs trac:4520

This commit was SVN r31413.

The following Trac tickets were found above:
  Ticket 4520 --> https://svn.open-mpi.org/trac/ompi/ticket/4520
 2014-04-16 18:01:17 +00:00
Mike Dubman
b0ade11ae4 OSHMEM: fix compilation error with pathscale 
Thanks to  Ake Sandgren for patch

reviewed by Roman/Miked

cmr=v1.8.1:reviewer=ompi-rm1.8

This commit was SVN r31412.
 2014-04-16 17:58:22 +00:00
Mike Dubman
f06953236e OSHMEM: added missing files to changeset r31390 
This commit was SVN r31392.

The following SVN revision numbers were found above:
  r31390 --> open-mpi/ompi@a3f83616fc
 2014-04-15 07:23:39 +00:00
Mike Dubman
a3f83616fc OSHMEM: align profiling interface with SPEC 1.0 
Now we should be full compliant to OSHMEM SPEC 1.0

fixed by Roman reviewed by Miked

cmr=v1.8.1:reviewer=ompi-rm1.8

This commit was SVN r31390.
 2014-04-14 20:51:06 +00:00
Mike Dubman
325f4e0449 OSHMEM: sshmem verbs: ofed api changes 
Use only contig allocator if shared_mr() is not supported
Fixes ibv_exp_reg_mr() parameters passing.
Fixes incorrect handling of sshmem_verbs_hca_name option.

fixed by AlexM, reviewed by Mike

cmr=v1.8.1:reviewer=ompi-rm1.8

This commit was SVN r31379.
 2014-04-13 16:54:18 +00:00
Mike Dubman
db44e23f72 OSHMEM: fix profiling API compilation 
Refs trac:4495

This commit was SVN r31334.

The following Trac tickets were found above:
  Ticket 4495 --> https://svn.open-mpi.org/trac/ompi/ticket/4495
 2014-04-08 10:48:10 +00:00
Mike Dubman
490d28e2d4 OSHMEM: usability fix for 32bit systems 
set default memheap start address to use one returned from memallocator
on 32bit system kernel may have issue because of this:

 CONFIG_STRICT_DEVMEM kernel option which "prevents user space access to physical memory above 1MB"

fixed by Roman, reviewed by Igor/Miked

cmr=v1.8.1:reviewer=ompi-rm1.8

This commit was SVN r31331.
 2014-04-07 23:04:25 +00:00
Mike Dubman
b20de8ae34 OSHMEM: add support for profiling API 
use weak symbols, based on http://www.open-mpi.org/community/lists/devel/2014/03/14429.php
fixed by Roman, reviewed by Igor/Miked

cmr=v1.8.1:reviewer=ompi-rm1.8

This commit was SVN r31330.
 2014-04-07 22:55:21 +00:00
Mike Dubman
1e37dcf976 oshmem: use correct define name 
fixed by Roman, reviewed by Mike

cmr=v1.8.1:reviewer=ompi-rm1.8

This commit was SVN r31306.
 2014-04-02 17:57:37 +00:00
Jeff Squyres
173c046617 build: add Automake-like silent/verbose macros for "ln -s ..." operations 
Also, since I put some of the macros for these silent/verbose rules up
in the top-level Makefile.man-page-rules file, I renamed it to
Makefile.ompi-rules.

I've had this sitting around for a while; now seems like as good a
time as any to commit it.

This commit was SVN r31271.
 2014-03-28 18:24:32 +00:00
Jeff Squyres
50a705f247 Fix #4465: spall Quadrics correctly. 
Many thanks to Jeff Hammond for noticing.

cmr=v1.8:reviewer=ompi-rm1.8

This commit was SVN r31256.
 2014-03-27 17:52:43 +00:00
Mike Dubman
be3fc7bf20 OSHMEM: better error messages when failing 
Provide users with right fail reason.

fixes trac:4433

This commit was SVN r31202.

The following Trac tickets were found above:
  Ticket 4433 --> https://svn.open-mpi.org/trac/ompi/ticket/4433
 2014-03-25 15:27:13 +00:00