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Граф коммитов

803 Коммитов

Автор SHA1 Сообщение Дата
Jeff Squyres
1cf197d771 coll_basic_barrier: guard against opal_hibit() returning -1
This was CID 1196606 and 1196607
2015-02-24 15:24:08 -05:00
Howard Pritchard
c9e81b54fb Merge pull request #412 from hppritcha/topic/owner_files
add owner files to opa/ompi/orte mca directories
2015-02-23 09:48:20 -07:00
Howard Pritchard
61fb62499a hcoll belongs to MLNX and is active 2015-02-23 09:14:03 -07:00
Gilles Gouaillardet
004160f8da coll/tuned: silence CID 1269934 2015-02-23 13:45:23 +09:00
Howard Pritchard
bf89131f9e add owner files to opa/ompi/orte mca directories
This commit adds an owner file in each of the component directories
for each framework.  This allows for a simple script to parse
the contents of the files and generate, among other things, tables
to be used on the project's wiki page.  Currently there are two
"fields" in the file, an owner and a status.  A tool to parse
the files and generate tables for the wiki page will be added
in a subsequent commit.
2015-02-22 15:10:23 -07:00
Igor Ivanov
010dce307a Fix set of coverity issues
List of CIDs (scan.coverity.com):
oshmem:
1269787, 1269907, 1270161, 1270162, 1270977, 1270978
ompi:
1270170, 1270172, 1270173

Signed-off-by: Igor Ivanov <Igor.Ivanov@itseez.com>
2015-02-20 17:45:46 +04:00
Gilles Gouaillardet
bda8058f39 coll/tuned: fix memory leaks and misc issues
as reported by Coverity with CIDs
70132, 70265, 70267, 70268, 70322, 70400, 70580, 70615,
1269934, 1269944, 1269968, 1269982, 1269983
2015-02-18 16:29:42 +09:00
Jeff Squyres
27a783b1c3 coll_sm_barrier: remove dead code
This was CID 1269978.
2015-02-12 10:24:02 -08:00
Rolf vandeVaart
1f749b0224 Bump priority of coll cuda component so it is higher than self.
Otherwise, get some odd interactions with coll self in CUDA-aware
builds.
2015-02-12 12:29:03 -05:00
Jeff Squyres
a1c521f968 We're .opal_ignore these days, not .ompi_ignore. :-) 2015-02-03 13:56:53 -08:00
Jeff Squyres
30f05bc966 Makefiles: remove unused macros 2015-01-31 04:51:25 -08:00
George Bosilca
7adf74c617 As discussed on the devel mailing list in
http://www.open-mpi.org/community/lists/devel/2015/01/16820.php,
coll ML has two pending issues: a deadlock and a performance critical
on every communicator creation. After confirmation over IM from
Pasha, the ML collective module will be disabled until it is
fixed. Token to Pasha.
2015-01-27 16:27:12 -05:00
Jeff Squyres
2d5b92157f hierarch: with Edgar's blessing, remove the coll hierarch module 2015-01-27 13:25:27 -06:00
Devendar Bureddy
036e687d9c HCOLL: Do not block hcoll progress in finalize 2015-01-27 17:01:00 +02:00
Gilles Gouaillardet
8c1698ae4a coll/libnbc: enhance fix for MPI_Ireduce_scatter on single task communicator
this improves open-mpi/ompi@b9349d2eb9
2015-01-09 13:44:01 +09:00
Devendar Bureddy
e732152304 HCOLL: Fix hcoll supported datatype checks corretcly 2015-01-02 21:18:12 +02:00
Gilles Gouaillardet
b9349d2eb9 coll/libnbc: fix MPI_Ireduce_scatter for single task communicator
when MPI_IN_PLACE is not used.

that commit fixes a regression introduced
open-mpi/ompi@49e79a9ade
2014-12-24 12:12:58 +09:00
Devendar Bureddy
e398ad6619 HCOLL: Fix OMPI to HCOLL predefined datatypes, Ops mapping 2014-12-23 22:30:29 +02:00
Rolf vandeVaart
3ec9685ee0 Add missing file to sources. Without this, tarball build does not work 2014-12-18 07:17:28 -08:00
George Bosilca
d622db783d Based on https://github.com/open-mpi/ompi/pull/262, we should use
true_lb while computing the lower bound.
2014-11-21 19:16:05 +09:00
Gilles Gouaillardet
705147e98b coll/tuned: fix allgather bruck algorithm 2014-11-21 19:16:05 +09:00
Ralph Castain
780c93ee57 Per the PR and discussion on today's telecon, extend the process name definition as a two-field struct of uint32_t's down to the OPAL layer. This resolves issues created by prior commits that impacted both heterogeneous and SPARC support. This also simplifies the OMPI code base by removing the need for frequent memcpy's when transitioning between the OMPI/ORTE layers and OPAL.
We recognize that this means other users of OPAL will need to "wrap" the opal_process_name_t if they desire to abstract it in some fashion. This is regrettable, and we are looking at possible alternatives that might mitigate that requirement. Meantime, however, we have to put the needs of the OMPI community first, and are taking this step to restore hetero and SPARC support.
2014-11-11 17:00:42 -08:00
bosilca
e7c59e3adb Merge pull request #227 from ggouaillardet/rfc/coll_basic_neighbor
RFC/coll basic neighbor
2014-11-07 11:33:25 -05:00
Gilles Gouaillardet
64c18686b7 fix ompi_request_wait vs ompi_request_wait_all and
MPI_STATUS_IGNORE vs MPI_STATUSES_IGNORE
2014-11-04 12:16:30 +09:00
Jeff Squyres
c22e1ae33b configury: new OPAL_SET_LIB_PREFIX/ORTE_SET_LIB_PREFIX macros
These two macros set the prefix for the OPAL and ORTE libraries,
respectively.  Specifically, the OPAL library will be named
libPREFIXopen-pal.la and the ORTE library will be named
libPREFIXopen-rte.la.

These macros must be called, even if the prefix argument is empty.

The intent is that Open MPI will call these macros with an empty
prefix, but other projects (such as ORCM) will call these macros with
a non-empty prefix.  For example, ORCM libraries can be named
liborcm-open-pal.la and liborcm-open-rte.la.

This scheme is necessary to allow running Open MPI applications under
systems that use their own versions of ORTE and OPAL.  For example,
when running MPI applications under ORTE, if the ORTE and OPAL
libraries between OMPI and ORCM are not identical (which, because they
are released at different times, are likely to be different), we need
to ensure that the OMPI applications link against their ORTE and OPAL
libraries, but the ORCM executables link against their ORTE and OPAL
libraries.
2014-10-22 10:32:19 -07:00
bosilca
d819939841 Merge pull request #233 from ggouaillardet/rfc/coll_module_disable
Provide a symmetric behavior for the activation/deactivation of collective modules.
2014-10-16 09:22:04 -04:00
George Bosilca
7541c03b4c Mark all instances where atomic operations are used but their return value is unnecessary 2014-10-15 21:47:32 -04:00
Gilles Gouaillardet
e3f74aca1c Correctly mote the pointer back by the true_lb.
Fixes #231
2014-10-14 16:26:54 +09:00
Gilles Gouaillardet
0f983d5a4f add a disable function for coll module 2014-10-14 14:46:36 +09:00
Devendar Bureddy
7a6b4c36b0 HCOLL: Update the proc structure dereference
Update the proc structure dereference to reflect the new opal_proc_t
super field
2014-10-13 20:49:19 +03:00
Devendar Bureddy
b8d2a15be9 HCOLL: by default off 2014-10-13 20:49:09 +03:00
Gilles Gouaillardet
8eb2d62919 coll/sm: fix an other memory leak 2014-10-10 19:54:45 +09:00
Gilles Gouaillardet
27e4389259 * comment on communicator creation in mca_topo_base_dist_graph_create(...)
* use accesors to retrieve topo info
2014-10-10 16:07:20 +09:00
Gilles Gouaillardet
5d44a30111 coll/sm: fix minor memory leaks
port 4488.1.patch attached in #196 to master
2014-10-10 14:21:34 +09:00
Gilles Gouaillardet
76204dfafe coll/basic: fix segmentation fault in neighborhood collectives if the degree
of the topology is higher than the communicator size

It is possible to have a topology degree higher than the size of the communicator.
For example, a periodic cartesian communicator on MPI_COMM_SELF. This will leave
the neighborhood collectives with a request buffer that is too small.

This commits introduces a semantic change :
from now, c_topo must be set before invoking coll_select
2014-10-10 11:56:04 +09:00
Gilles Gouaillardet
2f67f29b85 Revert "coll/basic: fix segmentation fault in neighborhood collectives if the degree"
This reverts commit 9c788ff940.
2014-10-10 11:29:06 +09:00
Howard Pritchard
bb65835816 Fix iallgather problem with intercommunicators
A problem was found with the libnbc MPI_Iallgather
routine when using intercommunicators.  Special
thanks to Takahiro Kawashima(Fujitsu) for the patch
and a test case.  Verified master fails without the
patch and the test passes with the patch applied.

fixes #219
2014-10-02 11:45:17 -06:00
Howard Pritchard
0f74467264 switch to ompi_mpi_thread_provided for ts check
Use ompi_mpi_thread_provided rather than opal_using_threads macro
to check whether MPI_THREAD_MULTIPLE is being used.

This commit was SVN r32815.
2014-09-29 22:20:35 +00:00
Howard Pritchard
7069f2361a disqualify coll ml for MPI_THREAD_MULTIPLE
This commit was SVN r32814.
2014-09-29 21:02:15 +00:00
George Bosilca
49e79a9ade Fix the case of a single process.
This commit was SVN r32807.
2014-09-28 22:06:39 +00:00
Nathan Hjelm
9c788ff940 coll/basic: fix segmentation fault in neighborhood collectives if the degree
of the topology is higher than the communicator size

It is possible to have a topology degree higher than the size of the communicator.
For example, a periodic cartesian communicator on MPI_COMM_SELF. This will leave
the neighborhood collectives with a request buffer that is too small. This commit
adds a call that will dynamically increase the size of the request buffer if it
is too small.

A better fix would be to create the topology *before* calling the coll_select
routine on a communicator. This will take some discussion and the solution will
not likely be ready anytime soon.

Thanks to Lisandro Dalcin for reporting this.

Original thread: http://www.open-mpi.org/community/lists/devel/2014/08/15713.php

cmr=v1.8.3:reviewer=jsquyres

This commit was SVN r32796.
2014-09-25 17:43:29 +00:00
Rolf vandeVaart
5c73101a72 Fix typo.
This commit was SVN r32755.
2014-09-18 13:58:54 +00:00
Vasily Filipov
c7c63fe73e COLL/TUNED: alltoall - return previous default values of algorithm choosing decision thresholds (were changed by r32735)
reviewed by miked
    cmr=v1.8.3:reviewer=ompi-rm1.8

This commit was SVN r32753.

The following SVN revision numbers were found above:
  r32735 --> open-mpi/ompi@5fecf65daf
2014-09-18 08:07:51 +00:00
Rolf vandeVaart
8db1f89dd1 Small change to allow CUDA-aware to work with non-reduction nonblocking collectives.
Only used when CUDA-aware feature compiled in.

This commit was SVN r32750.
2014-09-17 16:55:01 +00:00
Vasily Filipov
ff10b25e7d warnings (caused by commit r32735) fix.
reviewed by miked
    cmr=v1.8.3:reviewer=ompi-rm1.8 

This commit was SVN r32740.

The following SVN revision numbers were found above:
  r32735 --> open-mpi/ompi@5fecf65daf
2014-09-16 06:33:49 +00:00
Vasily Filipov
5fecf65daf OMPI/COLL/Tuned: add command line params for thresholds to decide if small/intermediate MSGs alltoall algorithm will be used.
cmr=v1.8.3:reviewer=miked

This commit was SVN r32735.
2014-09-15 12:34:21 +00:00
Gilles Gouaillardet
edfbeba7bf coll/ml: better error handling
when CHECK_AND_RECYCLE detects an error, a message is displayed
if the error occurs on an intrinsic communicator, then abort
the program (instead of trying to free the communicator)

cmr=v1.8.3:reviewer=hjelmn

This commit was SVN r32659.
2014-09-01 10:00:49 +00:00
Ralph Castain
b554cd7d86 Turn off the coll/ml component if --without-hwloc was given
cmr=v1.8.3:reviewer=jsquyres

This commit was SVN r32621.
2014-08-27 20:25:39 +00:00
Rolf vandeVaart
8709071819 Fix missing help file.
This commit was SVN r32550.
2014-08-18 21:52:31 +00:00
Gilles Gouaillardet
22cb8a1834 check-help-strings cleanup
This commit was SVN r32497.
2014-08-11 03:27:45 +00:00