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Автор SHA1 Сообщение Дата
Yael Dayan
b3b8a2a23a function mca_btl_openib_endpoint_post_send can return 3 statuses:
- OMPI_SUCCESS
- OMPI_ERROR
- OMPI_ERR_RESOURCE_BUSY

If an "OMPI_ERR_OUT_OF_RESOURCE" occurs, the request is added to the pending list, and will be handled later. An error message 
should not be printed to the user in this case. This is not an error, but rather a notification of a possible valid condition.
Only in the case of "OMPI_ERROR" should it be printed to the user.

This commit was SVN r27065.
2012-08-16 07:04:40 +00:00
Christopher Yeoh
cc091f4979 Adds synchronisation between main thread and service thread in
btl_openib_connect_udcm when notifying not to listen to an fd to ensure
that the main thread does not continue until the service thread has
processed the message

Adds ability to send message to openib async thread to tell it to
ignore the ERR state on a specific QP. Adds this call to udcm_module_finalize
so when we set the error state on the QP it doesn't cause the 
openib async thread to abort the mpi program prematurely

Fixes trac:3161

This commit was SVN r27064.

The following Trac tickets were found above:
  Ticket 3161 --> https://svn.open-mpi.org/trac/ompi/ticket/3161
2012-08-16 03:56:21 +00:00
Samuel Gutierrez
7867330dcc Fix the PSM MTL in trunk by gathering node locality information differently.
This commit was SVN r27063.
2012-08-16 00:50:24 +00:00
Jeff Squyres
6e463c4ef1 Remove extra semicolon. Thanks to John Foster for pointing out the
issue. 

This commit was SVN r27052.
2012-08-15 18:36:59 +00:00
Jeff Squyres
0ef6782b0b * Fix some comments to update to the new Fortran binding directory
structure
 * Minor optimization: if MPI_Test returns flags==.FALSE., don't copy
   over the request/status to the OUT variables
 * Update comments about .TRUE./.FALSE. compiler values

This commit was SVN r27041.
2012-08-14 23:13:32 +00:00
Jeff Squyres
4e3b02e836 This is an amazingly long-lived bug; AFAICT, this has been around
forever.  

Don't copy a value back to the user's buffer unless the FLAG was set
to .TRUE. (i.e., indicating that we found the key).

This commit was SVN r27040.
2012-08-14 23:10:21 +00:00
Jeff Squyres
5594c90fce * Minor touch-ups to ompi/info/info.c to distinguish between keys and
vals.
 * Note that the pre-defined Info objects don't need to have fortran
   indexes assigned; they should already be assigned in the
   constructor.  So add an assert() to ensure that this really happens
   properly. 
 * Add MPI_ENV_INFO to the Fortran interfaces

This commit was SVN r27039.
2012-08-14 23:05:41 +00:00
Jeff Squyres
7a4d6f05cf It is valid to call MPI_Init(NULL, NULL), so be sure to handle the
case where the passed-in argv is NULL.

This commit was SVN r27029.
2012-08-14 16:33:53 +00:00
Ralph Castain
589acf550c Improve the new MPI_INFO_ENV to better handle Java applications and to correctly report the info for singletons.
This commit was SVN r27025.
2012-08-13 22:13:49 +00:00
Ralph Castain
360dcd5f50 Protect ompi_info_init from java's sad behavior of removing the cmd from argv
This commit was SVN r27020.
2012-08-13 18:59:38 +00:00
Nathan Hjelm
4bde7f3efe silence warning
This commit was SVN r27019.
2012-08-13 17:43:36 +00:00
Nathan Hjelm
702e6d5a68 pml/ob1: fix bugs in mca_pml_ob1_recv_request_progress_rget
This commit was SVN r27018.
2012-08-13 16:26:06 +00:00
Jeff Squyres
02e2c88224 Back out r26869 (i.e., put back a single per-peer QP in the default
receive queues value) so that we don't break the use of RDMA CM, and
therefore break RoCE.

This commit was SVN r27017.

The following SVN revision numbers were found above:
  r26869 --> open-mpi/ompi@fe0e7f81df
2012-08-13 15:57:21 +00:00
Ralph Castain
c90b7380c1 Sigh - of course, they changed the name of the silly MPI_Info object in the final standard, but not in the proposal. So change to the new MPI_INFO_ENV name. Also, don't set unknown values to "N/A", but just leave them unset.
This commit was SVN r27012.
2012-08-12 05:00:57 +00:00
Ralph Castain
cb48fd52d4 Implement the MPI_Info part of MPI-3 Ticket 313. Add an MPI_info object MPI_INFO_GET_ENV that contains a number of run-time related pieces of info. This includes all the required ones in the ticket, plus a few that specifically address recent user questions:
"num_app_ctx" - the number of app_contexts in the job
"first_rank" - the MPI rank of the first process in each app_context
"np" - the number of procs in each app_context

Still need clarification on the MPI_Init portion of the ticket. Specifically, does the ticket call for returning an error is someone calls MPI_Init more than once in a program? We set a flag to tell us that we have been initialized, but currently never check it.

This commit was SVN r27005.
2012-08-12 01:28:23 +00:00
Samuel Gutierrez
6188d97e1a Getting out of bed this morning was a bad idea... Reverting the sm update once more because it breaks direct launch. Will address this issue and commit the update once it has all been tested. Sorry everyone!
This commit was SVN r27001.
2012-08-10 22:20:38 +00:00
Jeff Squyres
7b0af8a760 Fix bad copyright comment
This commit was SVN r26999.
2012-08-10 21:53:17 +00:00
Jeff Squyres
7390ab8a23 Many updates and bug fixes for the Fortran bindings. Sorry these
aren't separated out into individual commits; they represent a few
months of work in the Mercurial branch, and it seemed error-prone to
try to break them up into multiple SVN commits.

 * Remove 2nd overloaded interfaces for MPI_TESTALL, MPI_TESTSOME,
   MPI_WAITALL, and MPI_WAITSOME in the "mpi" module implementations
   (because we're not allowed to have them, anyway -- it causes
   complications in the profiling interface).  This forced an MPI-2.2
   errata in the MPI Forum; we applied the errata here (the array of
   statuses parameter could not have a specific dimension specified in
   the dummy argument).  Fixes trac:3166.
 * Similarly, fix type for MPI_ARGVS_NULL in Fortran
 * Add MPI_3.0 function MPI_F_SYNC_REG (Fortran interfaces only).
 * Add MPI-3.0 MPI_MESSAGE_NO_PROC in the mpi_f08 module.
 * Added mpi_f08 handle comparison operators, per MPI-3.0 addendum to
   the F08 proposal at the last Forum meeting.  
 * Added missing type(MPI_File) and type(Message) in mpi_f08 module.
 * Fix --disable-mpi-io configure switch with all Fortran interfaces
 * Re-factor the Fortran header files to be fundamentally simpler and
   easier to maintain.  Fortran constant values in the header files
   are now generated by a script named mpif-values.pl during
   autogen.pl (they were previously generated by mpif-common.pl, but
   it was quite a bit more subtle/complex).  A second commit will
   follow this one to update svn:ignore values (just to ensure we
   don't muck up the first commit with the SVN client getting confused
   by the changed ignore values and new/changed files).
 * Fix some dependencies for compile ordering in
   ompi/mpi/fortran/use-mpi-ignore-tkr/Makefile.am. 
 * Fix bad wording in several places (.m4 file name, ompi_info output,
   etc.): we previoulsy said "F08 assumed shape" when we really meant
   "F08 assumed rank" (for Fortran gurus, those are very different
   things). 
 * Removed the GREEK/SVN version string from mpif.h.  It really had no
   purpose being there.

Still to be done:

 * Handling of 2D array of strings in MPI_COMM_SPAWN_MULTIPLE still
   isn't right yet.  Not sure how many people really care about this
   :-), but it is still broken.

This commit was SVN r26997.

The following Trac tickets were found above:
  Ticket 3166 --> https://svn.open-mpi.org/trac/ompi/ticket/3166
2012-08-10 21:19:47 +00:00
Samuel Gutierrez
159bd2e62e Let's try this again: sm BTL initialization via modex.
This commit was SVN r26989.
2012-08-10 20:12:36 +00:00
Samuel Gutierrez
6a70063812 Yikes - that's not right! Back out 26987. I'll try again in a bit... Sorry!
This commit was SVN r26988.
2012-08-10 19:57:51 +00:00
Samuel Gutierrez
2c80273246 sm BTL initialization via modex.
This commit was SVN r26987.
2012-08-10 19:51:41 +00:00
Jeff Squyres
c339131b1e Do NOT remove all the source files in "make distclean" -- that's a
holdover from when these files were generated.

This commit was SVN r26982.
2012-08-10 02:04:50 +00:00
Jeff Squyres
555c09f568 Also add -g to FCFLAGS if --enable-debug is specified
This commit was SVN r26980.
2012-08-10 01:57:46 +00:00
Yael Dayan
79e6b9c91d Adapt OMPI to use newer version of MXM.
This commit was SVN r26974.
2012-08-08 15:29:38 +00:00
Yael Dayan
954bcdc0a5 adapt the way to find amount of local processes to OMPI trunk.
This commit was SVN r26973.
2012-08-08 15:26:28 +00:00
Jeff Squyres
2f136023f0 Some Fortran fixes to r26967.
This commit was SVN r26968.

The following SVN revision numbers were found above:
  r26967 --> open-mpi/ompi@083938cc10
2012-08-08 13:46:15 +00:00
George Bosilca
083938cc10 It is now almost impossible to add a new function to the MPI interface
without messing the Fortran part.

This commit was SVN r26967.
2012-08-08 13:17:57 +00:00
George Bosilca
6c39d16319 It is not redundant once the typo is corrected.
This commit was SVN r26965.
2012-08-08 11:28:36 +00:00
Jeff Squyres
7af34b1557 Remove redundant parameter declaration for MPI_COMBINER_INDEXED_BLOCK
This commit was SVN r26964.
2012-08-08 11:20:35 +00:00
Jeff Squyres
da219e6ab6 Remove the use of mpi_f08_interfaces -- it shouldn't be there.
Thanks to Nathan for spotting this.

This commit was SVN r26963.
2012-08-07 20:04:01 +00:00
George Bosilca
113b45b4e6 Add support for the new MPI_Type_create_hindexed_block (MPI 3.0).
This commit was SVN r26962.
2012-08-07 12:48:30 +00:00
George Bosilca
3e288aaef6 Indentation.
This commit was SVN r26961.
2012-08-07 12:46:47 +00:00
Shiqing Fan
2f442799f8 fix several typecasts
This commit was SVN r26957.
2012-08-07 10:41:53 +00:00
Yael Dayan
7895cd1114 adding a fragmentation mechanism to the Get flow in function mca_pml_ob1_recv_request_progress_rget
This commit was SVN r26956.
2012-08-07 07:15:21 +00:00
Vasily Filipov
fc712182db MTL MXM: make MXM use MXM_VERSION macro for MXM version checking.
This commit was SVN r26952.
2012-08-06 06:35:57 +00:00
Ralph Castain
89f3754559 Bring in the rest of MPI-3 Ticket #125 changes, including changes to mpi.h, function param lists, and associated documentation.
This commit was SVN r26944.
2012-08-03 01:09:59 +00:00
Ralph Castain
bf701f6c55 Make PMPI match MPI defs
This commit was SVN r26942.
2012-08-02 16:58:04 +00:00
Ralph Castain
8b595ddf84 Complete changes specified in MPI-3 Ticket #125. Still holding on proposed change to MPI_Init as it remains under discussion (and is just plain uuuugly). No action taken on changing string arrays as that part of #125 was not included in the final pdf text.
This commit was SVN r26939.
2012-08-02 16:31:02 +00:00
Ralph Castain
05845214b8 Add missing include file
This commit was SVN r26934.
2012-08-01 04:08:47 +00:00
Matthias Jurenz
79a065290c Changes to OTF:
- general:
		- incremented version number to 1.11.2openmpi
	- lib OTFAUX:
		- speed-up messages matching, if no snapshots should be generated

Changes to VT:
	- general:
		- incremented version number to 5.13.1openmpi
	- compiler wrappers:
		- vtnvcc:
			- add path to cuda.h to the PDT parser command
			- exclude *.cu source files from instrumenting with PDT/TAU; the PDT parser is not (yet) able to handle CUDA statements and kernels
	- vtunify:
		- fixed timestamp boundary check for merging asynchronous plugin counters (i.e. async. timestamp must >= process' start timestamp)
		- fixed timestamp conversion from local to global
		- print percentage of message matching bumps (unmatched or reversed messages)
		- inlined key-value list "record handler"
		- minor optimizations in hook for merging async. events:
			- search async. source manager only once per stream
			- don't call writeRecHook_Event() if no async. source key is defined

This commit was SVN r26925.
2012-07-31 08:45:37 +00:00
Vasily Filipov
c386847d9a MTL MXM: Adding MXM version protect for Mprobe, Mrecv resources.
This commit was SVN r26922.
2012-07-31 07:57:25 +00:00
Vishwanath Venkatesan
dccfd18481 1. Removing two-phase support functions
2. Moving nbc headers to a seperate header file and modifying
io_ompio_nbc.c accordingly.

This commit was SVN r26921.
2012-07-31 04:39:13 +00:00
Vishwanath Venkatesan
539571171b Moving support functions of two-phase to the two_phase component.
This commit was SVN r26920.
2012-07-31 04:37:04 +00:00
Edgar Gabriel
fb64322dc3 this code section was supposed to be commented out...
This commit was SVN r26918.
2012-07-30 20:46:07 +00:00
Edgar Gabriel
1078f13ad2 set status->_ucount correctly for collective read and write operations in the module
This commit was SVN r26916.
2012-07-30 20:14:36 +00:00
Edgar Gabriel
91c8577d9d fix in the offset calculation for explicit offset operations.
This commit was SVN r26915.
2012-07-30 20:08:00 +00:00
Edgar Gabriel
81a050add9 simplify the individual fcoll module by just calling the
mca_io_ompio_file_read/write functions directly. Avoid replicating the code in 
both places.

This commit was SVN r26909.
2012-07-30 15:44:22 +00:00
Edgar Gabriel
66c5a80dfd - get rid of a warning about an unused variable
- return MPI_ERR_OTHER instead of MPI_SUCCESS for the functions that are not
  yet implemented 
- add another field to the mca_io_ompio_file_t structure to point back to the
  ompi_file_t structure.

This commit was SVN r26908.
2012-07-30 15:29:59 +00:00
Jeff Squyres
9f8265eccb The files for automake to generate are specified via AC_CONFIG_FILES
in the */configure.m4 files.  configure.params files are obsolete.

This commit was SVN r26897.
2012-07-27 14:33:17 +00:00
Shiqing Fan
42dfbc7d2f Another CMake scripts update for:
correctly generate hwloc library
automatically define OMPI/OPAL/ORTE_OMPORTS for user applications
update the f77 bindings

This commit was SVN r26893.
2012-07-27 11:49:09 +00:00
Yevgeny Kliteynik
a6458da4ba Using 8K as a minimal CQ length
- For now we'll use 8192 as a base value
 - We leave the adjust_cq() as is
 - For the long term we can work on an appropriate setting to expose through the INI file.

8K CQEs are 512K per process, which is 8MB for ppn=16

This commit was SVN r26877.
2012-07-26 21:06:18 +00:00
Nathan Hjelm
8736953c7f btl/openib/connect improve the help message printed when a queue pair can not be created
This commit was SVN r26876.
2012-07-26 20:36:46 +00:00
Shiqing Fan
204fbfe4b1 update the wv btl component.
This commit was SVN r26872.
2012-07-26 15:35:01 +00:00
George Bosilca
3a8478827b Fix the MPI_Cancel issue identified by Fujitsu. And a typo.
This commit was SVN r26871.
2012-07-26 14:06:24 +00:00
Vasily Filipov
4e66ff030b MTL MXM Mrecv: adding missed return message to a free list.
This commit was SVN r26870.
2012-07-26 11:22:22 +00:00
Nathan Hjelm
fe0e7f81df btl/openib: as discussed remove the per-peer queue pair from the default configuration
This commit was SVN r26869.
2012-07-25 22:53:58 +00:00
Jeff Squyres
5ec6a65a72 After I spent a while looking in libibverbs for
ibv_get_device_list_compat() and not finding it, I finally realized
that it was a function in OMPI.  So let's name it with a proper ompi_
prefix, not an ibv_ prefix.

This commit was SVN r26867.
2012-07-25 16:32:51 +00:00
Vasily Filipov
ef9bd8e4cb MTL MXM: MPI_Mprobe, MPI_Mrecv implementation for MXM adding.
This commit was SVN r26866.
2012-07-25 13:26:40 +00:00
George Bosilca
118e30a2ac Typo.
This commit was SVN r26865.
2012-07-25 12:42:31 +00:00
George Bosilca
b6f4bc9656 size_t not int everywhere. Correctly compute with size_t (don't initialize
it to a negative number). Get rid of the multiplication in the critical
path, and keep the functions as simple as possible.

This commit was SVN r26864.
2012-07-25 12:41:53 +00:00
Yael Dayan
8cad1d6481 while working on a fix for the Get flow in pml, I've encountered a problem in "mca_pml_ob1_compute_segment_length" function, at pml_ob1.h file.
The return value from this function was truncated from size_t to int. This fix changes the return value to type size_t.

This commit was SVN r26863.
2012-07-25 12:08:41 +00:00
George Bosilca
b0e2dc7ae3 Fix the darray issue where the UB was not computed correctly. The
old version of the code tried to use the MPI_UB marker, but this
failed if the old marker (the one set in the cyclic function) had
a larger value. Replace the hardcore markers MPI_LB and MPI_UB by
their softer counterparts (using the _resize function).

This commit was SVN r26862.
2012-07-24 22:24:54 +00:00
Jeff Squyres
9cb3f31b50 Odd; this compiled on OS X without needing #include "opal_stdint.h".
Linux appears to need it.  Shrug.

This commit was SVN r26858.
2012-07-24 13:47:24 +00:00
Jeff Squyres
6f5fd6245f Add missing %d
This commit was SVN r26857.
2012-07-24 13:33:11 +00:00
Jeff Squyres
0b4a659683 Stomp some compiler warnings; use proper printf sequences for uint64_t.
This commit was SVN r26856.
2012-07-24 13:03:55 +00:00
Jeff Squyres
e66d386441 Add a new missing field to the template BTL module that was causing a
bunch of compiler warnings.

This commit was SVN r26855.
2012-07-24 12:55:12 +00:00
Mike Dubman
4784253f5c revert commit, breaks backwards compatability, will be revised
This commit was SVN r26852.
2012-07-24 11:48:18 +00:00
Shiqing Fan
5d81c27282 Update the CMake files for Fortran 77 bindings, get ready for F90 bindings.
Change several variable names and update the macros.

This commit was SVN r26851.
2012-07-24 08:49:34 +00:00
Vasily Filipov
99bd5977bd MTL MXM: small fix in the mxm_req_probe func interface.
This commit was SVN r26850.
2012-07-24 08:46:38 +00:00
George Bosilca
6ebbacb054 Complete the dump function for the SM BTL. Now we can see all fragments in all
the queues as long as the BTL is dump-friendly (only SM right now).

This commit was SVN r26849.
2012-07-24 00:22:22 +00:00
George Bosilca
55bc3c4763 Fix the copyright.
This commit was SVN r26848.
2012-07-24 00:20:24 +00:00
George Bosilca
1ad6c82015 Implement the dump function for the PML OB1.
This commit was SVN r26847.
2012-07-24 00:19:18 +00:00
Samuel Gutierrez
76d94bf9bf Plug leak. Thanks, Nathan.
This commit was SVN r26846.
2012-07-23 21:11:21 +00:00
Samuel Gutierrez
8096852a16 Towards RML-less shared-memory initialization (primarily for eventual BTL
move).  Extended common sm API with: mca_common_sm_module_create and
mca_common_sm_module_attach. Please note that the new routines aren't currently
used -- but will be...

This commit was SVN r26845.
2012-07-23 19:38:13 +00:00
Matthias Jurenz
e5614013cf Changes to VT:
- configure:
		- added option --with[out]-liberty to enable/disable symbol demangling with libiberty; default: disabled, because many systems don't provide a PIC version of libiberty
		- fixed compiler flags for building Fortran MPI wrapper library

This commit was SVN r26839.
2012-07-23 13:21:19 +00:00
Matthias Jurenz
45dfa0d0b1 Changes to VT:
- added CUDA stream reuse for both, CUDA tracing with CUPTI and CUDART wrapper
	- removed CUDA stream number from thread name, when CUDA stream reuse is enabled
	- disable tracking of MPI communicators, requests, windows, etc. if MPI is initialized with MPI_THREAD_SERIALIZED or MPI_THREAD_MULTIPLE (only MPI function enter/leave events will be recorded)
	- configure:
		- fixed detection of compiler instrumentation type on Cray platforms using the cc compiler wrapper
	- compiler wrappers:
		- fixed preprocessing source files to be parsed by OPARI (add path to empty omp.h to the preprocessor flags to avoid multiple declarations of OpenMP functions, types, etc.)
		- vtnvcc: Remove 'compinst' instrumentation type, if VT is configured with a non-GNU compiler instrumentation support (Fixed "unrecognized option" error)
	- vtdyn:
		- added support for instrumenting outer- and inner loops and its iterations (outer=loops within a function, inner=loops within outer loops)
		- try to get the full prototype of functions to be instrumented
		- consider default filter rules also if no filter file is given
		- fixed potential segfault if adding a filter rule w/o stack bounds
		- print verbose messages on stdout if vtdyn is started from the Dyninst attach library (libvt-dynatt)
	- vtunify:
		- print verbose messages on stderr if vtunify is started automatically from the VT library

This commit was SVN r26836.
2012-07-23 10:15:22 +00:00
Shiqing Fan
4bbddf6875 Fix another typecast
This commit was SVN r26817.
2012-07-20 12:11:47 +00:00
Shiqing Fan
0f6184985d correct a few typecasts
This commit was SVN r26816.
2012-07-20 12:10:00 +00:00
Eugene Loh
10e3dc396b Add a missing return value.
This commit was SVN r26815.
2012-07-20 01:32:06 +00:00
Brian Barrett
2518014037 Fix a number of issues with IN_PLACE
This commit was SVN r26814.
2012-07-19 21:29:43 +00:00
Brian Barrett
c6cf561a17 remove unneeded rank
This commit was SVN r26813.
2012-07-19 21:29:18 +00:00
Brian Barrett
7f2296eb39 need count for memcheck...
This commit was SVN r26812.
2012-07-19 21:28:47 +00:00
Nathan Hjelm
cd2cbdca09 btl/openib: limit each process to a ppn fraction of the available registered memory when using mellanox hardware (mlx4 and mthca). fixed
This commit was SVN r26811.
2012-07-19 17:52:21 +00:00
Ralph Castain
66fe57f746 Revert r26804 so openib can build again
This commit was SVN r26810.

The following SVN revision numbers were found above:
  r26804 --> open-mpi/ompi@610be870f9
2012-07-19 16:16:38 +00:00
Ralph Castain
071c5fc85c Silence warnings
This commit was SVN r26809.
2012-07-19 14:29:47 +00:00
Ralph Castain
44bd855717 Silence warnings
This commit was SVN r26808.
2012-07-19 14:29:32 +00:00
Vasily Filipov
597a422272 MTL: make MXM work with read (in blocking send case) call-backs.
This commit was SVN r26807.
2012-07-19 13:28:06 +00:00
George Bosilca
0db06c57a1 Remove the duplicated prototype of PMPI_Reduce_scatter.
This commit was SVN r26806.
2012-07-19 13:12:42 +00:00
Ralph Castain
f3c312310d Revert r26801 so the trunk can build again
This commit was SVN r26805.

The following SVN revision numbers were found above:
  r26801 --> open-mpi/ompi@8f0525a8cc
2012-07-19 12:29:22 +00:00
Nathan Hjelm
610be870f9 btl/openib: limit each process to a ppn fraction of the available registered memory when using mellanox hardware (mlx4 and mthca)
This commit was SVN r26804.
2012-07-18 17:29:48 +00:00
Nathan Hjelm
4a97ecbdd2 btl/openib: remove tab characters
This commit was SVN r26803.
2012-07-18 17:29:37 +00:00
Eugene Loh
a3e02fdaff With non-blocking collectives, a "round schedule" could fall on any address
alignment, which typically causes problems on SPARC.  Further, the pointer
manipulation to access elements in a round schedule was clumsy.  This change
introduces macros to facilitate addressing and make it more portable.

This commit was SVN r26802.
2012-07-18 17:08:24 +00:00
George Bosilca
8f0525a8cc Fix the non-blocking collective prototypes.
This commit was SVN r26801.
2012-07-18 14:23:23 +00:00
Nathan Hjelm
771b427027 udcm: unmonitor the fd BEFORE tearing down the listen qp
This commit was SVN r26800.
2012-07-18 14:22:45 +00:00
Nathan Hjelm
35de50b823 remove the elan btl
This commit was SVN r26798.
2012-07-17 14:51:41 +00:00
Nathan Hjelm
fc1b295606 udcm: evict from the lru of the openib device's grdma mpool if a qp can not be created. Note: there doesn't appear to be a standard way to differentiate between ibv_create_qp failing because the node is out of registered memory and failing because no more qps are available
This commit was SVN r26797.
2012-07-14 01:58:29 +00:00
Nathan Hjelm
3798f38386 do not print out an error message if ibv_reg_mr fails
This commit was SVN r26796.
2012-07-14 01:35:45 +00:00
Abhishek Kulkarni
1878f276cd Replace the pattern while(flag) { opal_progress() }; in the C/R code
with the ORTE_WAIT_FOR_COMPLETION macro.

This commit was SVN r26794.
2012-07-13 23:31:56 +00:00
Nathan Hjelm
4d1920ee87 Fix a bug on 32-bit systems introduced by r26626. This fix ensures that all supported btls (with exception of wv-- shiqing will need to help bring that one up to date with r26626) set the lval in prepare_src/dst when preparing a put or get segment. This fix also ensures a consistent use of lval in put and get for both local and remote segments.
This commit was SVN r26793.

The following SVN revision numbers were found above:
  r26626 --> open-mpi/ompi@249066e06d
2012-07-13 21:19:16 +00:00
Nathan Hjelm
344fe61616 remove assertion in udcm
This commit was SVN r26790.
2012-07-13 15:14:48 +00:00
Jeff Squyres
e719d6ab78 It turns out that "sppp" on the Oracle Mx000 series of servers (where x =
{3, 4, 5, 9}, SPARC VI-based machines) is not a 127.x.y.z interface,
so it needs to stay in the exclude list.

This commit was SVN r26789.
2012-07-13 12:11:41 +00:00
Jeff Squyres
196bc0a53e Update the TCP BTL MCA param btl_tcp_if_exclude default value to use
CIDR notation 127.0.0.1/8 to ignore localhost devices instead of the
imprecise (and not always correct!) "lo,sppp".

This commit was SVN r26788.
2012-07-12 15:13:08 +00:00
Brian Barrett
40fd943fa0 Need to pass the right module in for ireduce_scatter_block.
This commit was SVN r26787.
2012-07-12 13:24:20 +00:00
Edgar Gabriel
92271c571d set the status field for collective read and write operations.
This commit was SVN r26786.
2012-07-12 10:26:27 +00:00
Nathan Hjelm
b79a61a360 move btl_vader.c to btl_vader_module.c
This commit was SVN r26785.
2012-07-11 20:14:19 +00:00
Brian Barrett
eb3c6546c2 Remove shortcut optimizations from non-blocking collectives. We need to call
into the collectives module even in the shortcutable cases to get the requests
created.

This commit was SVN r26784.
2012-07-11 16:03:55 +00:00
Terry Dontje
6f3195faca add some missing casts
This commit was SVN r26779.
2012-07-10 18:03:29 +00:00
Nathan Hjelm
05c5c1f412 remove unused i_initiate function from udcm
This commit was SVN r26778.
2012-07-10 17:22:19 +00:00
Jeff Squyres
bb13e21538 Roll back r26730, but bump the default CQ length base up to 1500, not
1000.  Refs trac:3154.

IB/iWarp vendors need to get together to figure out a real fix.

This commit was SVN r26777.

The following SVN revision numbers were found above:
  r26730 --> open-mpi/ompi@5315c91baf

The following Trac tickets were found above:
  Ticket 3154 --> https://svn.open-mpi.org/trac/ompi/ticket/3154
2012-07-10 16:53:27 +00:00
Nathan Hjelm
4c0c937953 Remove use of ompi_ptr_ltop in BTLs. This fixes a crash seen on big-endian 32-bit platforms with MPI one-sided.
This commit was SVN r26776.
2012-07-10 16:18:53 +00:00
George Bosilca
7d6006a5a6 Fix various compiler warnings.
This commit was SVN r26774.
2012-07-10 15:57:15 +00:00
Abhishek Kulkarni
2ca8292f46 Fix a typo in the sm btl (related to CMA support).
This commit was SVN r26772.
2012-07-10 00:12:05 +00:00
Jeff Squyres
88512c712f Fix a really outdated comment (it dated back to when all the OMPI
source code was under src/ !).

This commit was SVN r26771.
2012-07-10 00:06:00 +00:00
Abhishek Kulkarni
5c58a1c9c1 Fix C/R support in the trunk.
Among other things, this patch deals with the following issues:
* fix ompi-checkpoint argument parsing
* ompi-restart -showme prints an extraneous "Restarted child with PID" 
  message. Move around the debug statement to avoid this.
* fixes for the state machine changes

This commit was SVN r26770.
2012-07-09 23:34:13 +00:00
Jeff Squyres
f3f970673c Remove debug
This commit was SVN r26768.
2012-07-09 20:29:33 +00:00
Terry Dontje
43314776ae add cast to correct a type mismatch warning
This commit was SVN r26767.
2012-07-09 18:32:39 +00:00
Edgar Gabriel
d18dad7109 remove the file io_ompio_coll_offset. These routines were the predecessors of
the routines in io_ompio_coll_array. No need to keep both versions around.

This commit was SVN r26766.
2012-07-09 17:12:46 +00:00
Edgar Gabriel
8ae22cacc1 - remove two functions that were not used anymore
- change the location where we mark the file view as contiguous and the
  condition on how it is determined to be contiguous
- remove the unnecessary include statements

This commit was SVN r26763.
2012-07-08 12:57:17 +00:00
George Bosilca
46e808c940 Release the lock a little later.
This commit was SVN r26762.
2012-07-08 12:57:00 +00:00
George Bosilca
ee1410a8d2 A size_t variable should not start at a negative value.
This commit was SVN r26761.
2012-07-08 12:56:33 +00:00
George Bosilca
4326537fe9 Remove compiler warning about uninitialized variable.
This commit was SVN r26760.
2012-07-08 00:07:52 +00:00
George Bosilca
57f08ec2c8 Make it compile!
This commit was SVN r26759.
2012-07-08 00:06:13 +00:00
Brian Barrett
58413fa1e4 * properly setup communication infrastructure for libnbc.
* Prevent infinite recursion in progress loop.

Should fix improper barrier eugene was seeing.

This commit was SVN r26758.
2012-07-06 13:59:03 +00:00
Brian Barrett
e0ceabd486 Need to set MPI_ERROR in the status before calling ompi_request_complete.
This commit was SVN r26757.
2012-07-06 01:14:35 +00:00
Brian Barrett
27d45ad550 Implement reduce_scatter_block and ireduce_scatter_block, although possibly
not nearly as optimal as they should be.

This commit was SVN r26756.
2012-07-05 22:11:48 +00:00
Terry Dontje
025b42bbb7 corrected the change of pval to lval introduced in r26626
This commit was SVN r26751.

The following SVN revision numbers were found above:
  r26626 --> open-mpi/ompi@249066e06d
2012-07-05 13:31:24 +00:00
Matthias Jurenz
a1c6ab7c08 Changes to OTF:
- fixed RBuffer_searchTime() for compressed files

Changes to VT:
	- rebuild HTML+PDF version of VT user manual
	- fixed compiler instr. entry in configure summary (was empty if no compiler instr. found)

This commit was SVN r26750.
2012-07-05 12:56:07 +00:00
George Bosilca
ec760454a6 Cleaning ...
This commit was SVN r26747.
2012-07-04 21:22:13 +00:00
George Bosilca
63278df92d Prevent the coll SM from looking for information about remote procs
during the init phase. This information is only available at a 
later stage.

This commit was SVN r26746.
2012-07-04 21:15:40 +00:00
Matthias Jurenz
42d54e7bf7 Pass option --with-openmpi-inside=1.7 to VT's configure to select the correct Fortran MPI lib. (libmpi_mpifh instead of libmpi_f77)
This commit was SVN r26744.
2012-07-04 12:53:38 +00:00
Matthias Jurenz
a579b74ebc Upgraded VT version to 5.13
This commit was SVN r26743.
2012-07-04 12:46:53 +00:00
Jeff Squyres
a1da2776ff Per RFC timeout (#3129), remove the non-standard name MPI_MAX_NAME_LEN.
This commit was SVN r26737.
2012-07-03 19:43:18 +00:00
Terry Dontje
95a3b4a423 corrected the change of pval to lval introduced in r26626
This commit was SVN r26732.

The following SVN revision numbers were found above:
  r26626 --> open-mpi/ompi@249066e06d
2012-07-03 18:52:18 +00:00
Terry Dontje
1895ca2bc4 corrected a typo (lval instead of pval) introduced in r26626
This commit was SVN r26731.

The following SVN revision numbers were found above:
  r26626 --> open-mpi/ompi@249066e06d
2012-07-03 17:46:43 +00:00
Jeff Squyres
5315c91baf Fixes trac:3152: slightly more advanced than the patch on the ticket:
* If the MCA param btl_openib_cq_size is set to 0 (which is the
   default), use the device CQ max size. Otherwise, use the MCA param
   value (and never adjust it again).
 * Remove the CQ size adjustment code. Since we default to max CQ
   size, there really isn't much point in having it any more. I think
   people setting an absolute CQ size is going to be rare, so let's
   not do anything fancy with it.
 * If the MCA param value is larger than what the device supports,
   print a warning (only once per process) and default to using the
   device max
 * Add a BTL_VERBOSE displaying which CQ size we used

This commit was SVN r26730.

The following Trac tickets were found above:
  Ticket 3152 --> https://svn.open-mpi.org/trac/ompi/ticket/3152
2012-07-03 16:49:59 +00:00
Jeff Squyres
4ccf94c734 Fixes trac:3148. Ensure that MPI_2INTEGER uses MPI_INTEGER as its
underlying type, not MPI_INT.

This commit was SVN r26726.

The following Trac tickets were found above:
  Ticket 3148 --> https://svn.open-mpi.org/trac/ompi/ticket/3148
2012-07-03 11:23:02 +00:00
Nathan Hjelm
9f3717959e remove sync step from udcm as it really isn't necessary
This commit was SVN r26724.
2012-07-02 22:54:44 +00:00
Jeff Squyres
f96fa5ee2a Fixes trac:3146: fix faulty configure tests (that were introduced with the
new Fortran revamp a few months ago) that failed when you compiled
with "ifort -i8".

The secret: "test $foo -eq 0" fails when $foo is sufficiently large.
So instead, use "test "$foo" = "0"".  expr does work with large
integers, though, so one "test -lt" was replaced with expr.

This commit was SVN r26715.

The following Trac tickets were found above:
  Ticket 3146 --> https://svn.open-mpi.org/trac/ompi/ticket/3146
2012-07-02 20:33:11 +00:00
Brian Barrett
d56de80b5d * Properly initialize handle variable as a request (since the coll_libnbc_request contains everything an NBC_Handle used to contain). Not sure how this slipped through...
This commit was SVN r26710.
2012-07-02 16:39:42 +00:00
Jeff Squyres
bcca259302 Fix some Fortran typos.
This commit was SVN r26709.
2012-07-02 16:15:44 +00:00
Brian Barrett
7e67bfa175 Use OMPI's ops instead of the libnbc ops.
This commit was SVN r26708.
2012-07-02 15:47:22 +00:00
Pavel Shamis
f7664b3814 1. Adding 2 new components:
ofacm - generic connection manager for IB interconnects.
ofautils - IB common utilities and compatibility code

2. Updating OpenIB configure code

- ORNL & Mellanox Teams 

This commit was SVN r26707.
2012-07-02 15:20:12 +00:00
Yevgeny Kliteynik
0e28fa984b Remove dead code that was related to ticket #2971
This commit was SVN r26701.
2012-07-02 11:19:09 +00:00
Nathan Hjelm
a847df9ba5 ugni: fix eager get
This commit was SVN r26699.
2012-06-29 15:43:29 +00:00
Jeff Squyres
5d030278e1 Refs trac:3130: Per comment 8 on the ticket, this MX patch fixes the cases
where the MX BTL and MTL are stepping on each other regarding the
mpool.  Thanks to Yong Qin for assistance in tracking this down.

This commit was SVN r26698.

The following Trac tickets were found above:
  Ticket 3130 --> https://svn.open-mpi.org/trac/ompi/ticket/3130
2012-06-29 13:52:40 +00:00
Jeff Squyres
b936229b54 Refs trac:3130: fix the openib BTL to properly set the memalign malloc
hook early in the setup, but ''not'' during the component register
function.  And then properly unset it if was set.

This commit was SVN r26697.

The following Trac tickets were found above:
  Ticket 3130 --> https://svn.open-mpi.org/trac/ompi/ticket/3130
2012-06-29 13:51:36 +00:00
Jeff Squyres
f3a8722360 Fix comment.
This commit was SVN r26696.
2012-06-29 01:38:04 +00:00
Ralph Castain
e335de3564 Refactor ompi_info, splitting it into parts according to the layer involved. Thus, we call down to the opal layer to get those frameworks and components, and down to the orte layer to get those. Still some abstraction breaks, but they mostly involve renaming of OMPI_foo labels that have been around since before we split the build system by layer.
This commit was SVN r26695.
2012-06-28 18:23:34 +00:00
Brian Barrett
0b887ab5a1 * Remove unneeded prototype that was causing compile issues anyway
* Use proper tag space (the negatives below the blocking communicators)
  instead of the point-to-point space
* Use the PML interface instead of the MPI interface, since the MPI
  interface 1) shouldn't be used by components and 2) doesn't like
  negative tags

This commit was SVN r26693.
2012-06-28 16:52:03 +00:00
Edgar Gabriel
b0954a6a3e set the internal OMPIO file pointer to the end of the file if file has been
opened using the APPEND mode.

This commit was SVN r26692.
2012-06-28 15:15:47 +00:00
Edgar Gabriel
32b0dfed31 * set the status _ucount field correctly for individual read and write
operations
* removing a lingering reference to the ylib fcoll component, which will not
be part of the 1.7 branch.

This commit was SVN r26691.
2012-06-28 14:43:56 +00:00
Edgar Gabriel
be6ea52bb4 some further cleanup of resources in case of an error.
This commit was SVN r26690.
2012-06-28 13:58:23 +00:00
Ralph Castain
a1344bc5c0 Add missing header to tarball
This commit was SVN r26689.
2012-06-28 13:07:18 +00:00
Brian Barrett
32e70b691a Re-enable non-blocking collectives in libnbc after finding issue with the definition of
NBC_CACHE_SCHEDULE not being propogated to all uses.

This commit was SVN r26686.
2012-06-27 22:08:19 +00:00
Edgar Gabriel
b7a72feb1d minor code cleanup and make the MPI_MODE_DELETE_ON_CLOSE work
This commit was SVN r26685.
2012-06-27 20:54:58 +00:00
Brian Barrett
d85fdd2605 temporarily back out r26682 and r26683 until I can figure out why they cause crashes during shutdown
This commit was SVN r26684.

The following SVN revision numbers were found above:
  r26682 --> open-mpi/ompi@15a30af11f
  r26683 --> open-mpi/ompi@f6ea4b7234
2012-06-27 19:32:53 +00:00
Brian Barrett
f6ea4b7234 Remove now unneeded header file
This commit was SVN r26683.
2012-06-27 18:43:40 +00:00
Brian Barrett
15a30af11f Turn on all the non-blocking collectives provided by libnbc...
This commit was SVN r26682.
2012-06-27 18:32:57 +00:00
Jeff Squyres
9d87857c25 Warning squash: explicitly ignore the return value from asprintf.
This commit was SVN r26681.
2012-06-27 17:40:24 +00:00
Brian Barrett
3933d0a8f0 Ibarrier works! :)
This commit was SVN r26680.
2012-06-27 15:58:17 +00:00
Terry Dontje
2e014a5226 add mpif-all-common.h to the group of files to be copied as a part of a dist.
This commit was SVN r26679.
2012-06-27 15:16:44 +00:00
Ralph Castain
0dfe29b1a6 Roll in the rest of the modex change. Eliminate all non-modex API access of RTE info from the MPI layer - in some cases, the info was already present (either in the ompi_proc_t or in the orte_process_info struct) and no call was necessary. This removes all calls to orte_ess from the MPI layer. Calls to orte_grpcomm remain required.
Update all the orte ess components to remove their associated APIs for retrieving proc data. Update the grpcomm API to reflect transfer of set/get modex info to the db framework.

Note that this doesn't recreate the old GPR. This is strictly a local db storage that may (at some point) obtain any missing data from the local daemon as part of an async methodology. The framework allows us to experiment with such methods without perturbing the default one.

This commit was SVN r26678.
2012-06-27 14:53:55 +00:00
Josh Hursey
28681deffa Backout the ORCA commit. :(
There is a linking issue on Mac OSX that needs to be addressed before this is able to come back into the trunk.

This commit was SVN r26676.
2012-06-27 01:28:28 +00:00
Josh Hursey
32050f026f protect the ORTE_CHECK_PMI define in the OMPI layer for --no-orte builds
This commit was SVN r26674.
2012-06-27 00:28:37 +00:00
Josh Hursey
eac4913fc6 lorca to lopen-rca
This commit was SVN r26671.
2012-06-26 21:48:02 +00:00
Josh Hursey
542330e3a7 Commit of ORCA: Open MPI Runtime Collaborative Abstraction
This is a runtime interposition project that sits between the OMPI and ORTE layers in Open MPI.

The project is described on the wiki:
  https://svn.open-mpi.org/trac/ompi/wiki/Runtime_Interposition

And on this email thread:
  http://www.open-mpi.org/community/lists/devel/2012/06/11109.php

This commit was SVN r26670.
2012-06-26 21:42:16 +00:00
Jeff Squyres
d7787b625e Fix memchecker usage in these functions -- these variables are not
used.  They're just copy-n-paste errors from the MPI_Reduce_scatter
variants. 

This commit was SVN r26669.
2012-06-26 21:24:45 +00:00
Edgar Gabriel
288d044097 get rid of the fcache framework. It was not being used as originally intended.
This commit was SVN r26668.
2012-06-26 19:53:26 +00:00
Nathan Hjelm
086000ce8d remove mpool/rdma
This commit was SVN r26665.
2012-06-26 15:56:07 +00:00
Nathan Hjelm
37c624ee43 prepare to delete mpool/rdma
This commit was SVN r26664.
2012-06-26 15:55:23 +00:00
Jeff Squyres
ff5cb81faa Fix copy-n-paste error: the 2nd declarations of
PMPI_[Ir|R]educe_scatter should really have been for
PMPI_[Ir|R]educe_scatter_block.  

This commit was SVN r26663.
2012-06-26 14:05:33 +00:00
Jeff Squyres
d55e94678e Fix the names of the profiled versions of wtick/wtime so that the
Fortran compiler knows the return type of the functions.

This commit was SVN r26662.
2012-06-26 13:38:19 +00:00
Jeff Squyres
2ec29ba8d6 Add missing file from r26652.
This commit was SVN r26661.

The following SVN revision numbers were found above:
  r26652 --> open-mpi/ompi@1923f89170
2012-06-26 13:37:49 +00:00
Brian Barrett
7bdeafb772 Start bringing in libnbc. .ompi_ignored, as there's still a long way to go
This commit was SVN r26658.
2012-06-25 22:38:06 +00:00
Edgar Gabriel
6a2dd16ee3 cleaning up the usage of CFLAGS vs. CPPFLAGS. Thanks Jeff for helping with
that!

This commit was SVN r26655.
2012-06-25 20:32:58 +00:00
Edgar Gabriel
7a374c828a leave the wrapper flags as they are, not required to compile the components or
later for an application afterwards. Fixes the configure problem that we faced
on some lustre file systems. 

This commit was SVN r26653.
2012-06-25 20:01:06 +00:00
Jeff Squyres
1923f89170 Limit the types that we import when building the PMPI interfaces (we
already did this for the MPI interfaces).

This commit was SVN r26652.
2012-06-25 20:00:09 +00:00
Jeff Squyres
654259154d Ensure that [P]MPI_Iscan is compiled into the mpifh library on
weak-symbol-supporting systems.

This commit was SVN r26650.
2012-06-25 15:37:08 +00:00
Jeff Squyres
dd70f84e3d Fix some linker problems with MPI_[Ir|R]educe_scatter_block:
* Ensure the profiling version is linked in
 * Ensure that PMPI variants are prototyped in mpi.h
 * Ensure weak symbols are set correctly

This commit was SVN r26649.
2012-06-25 15:26:14 +00:00
Nathan Hjelm
2dbe630138 fix more udapl warnings/errors
This commit was SVN r26648.
2012-06-25 15:18:50 +00:00
Jeff Squyres
b979fe7baf Make a bunch of scripts be executable.
This commit was SVN r26642.
2012-06-22 22:02:45 +00:00
Brian Barrett
b9e8e4aeb9 * Initial merge of the non-blocking collectives interface. No implementation of
the back-end yet, coming real soon now, need to solve some tag issues first.

This commit was SVN r26641.
2012-06-22 20:54:12 +00:00
Jeff Squyres
148ae6d6e3 This commit unifies the configury of some verbs-lovin' components.
* Add new configure command line options and deprecate some old ones:
   * --with-verbs replaces --with-openib
   * --with-verbs-libdir replaces --with-openib-libdir
 * If you specify --with-openib[-libdir] without
   --with-verbs[-libdir], you'll get a "these options have been
   deprecated!" warning, but then they'll act just like
   --with-verbs[--libdir]. 

  '''Sidenote:''' Note that we are not renaming any components at this
  time, nor are we renaming the top-level OMPI_CHECK_OPENIB m4 macro
  (which is pretty strongly tied to the openib BTL and is bastaridzed
  by the ofud BTL).  Note that there will likely be more changes in
  this area coming soon (next week?) when some long-standing changes
  move to the SVN trunk: some openib BTL infrastructure will move to
  ompi/mca/common, and its configury gets split up / refactored.

We extend our philosophy of other --with-<foo> configure options of
--with-verbs to ''all'' verbs-lovin components:

 * If you specify --with-verbs, then all verbs-lovin' components must
   configure successfully (or abort).  This currently means: OOB ud,
   BTL ofud, BTL openib.
 * If you specify --with-verbs=DIR, then all verbs-lovin' component
   must configure successfully (or abort), and will use DIR to find
   verbs headers and libraries.
 * If you specify --without-verbs, then all verbs-lovin' components
   will be ignored.

This commit also fixes a problem where the --with-openib=DIR form
would not use DIR for ''all'' verbs-lovin' components (I think only
BTL openib and BTL ofud used that DIR).  Now all of them do, as does
hwloc (because hwloc has some !OpenFabrics helper functions that
require ibv types from verbs.h).

There's a little new m4 infrastructure worth mentioning:

 * If you create a new verbs-lovin' component (i.e., a component that
   need verbs), your configure.m4 should
   AC_REQUIRE([OPAL_CHECK_VERBS_DIR]). 
 * You can then use three global shell variables: $opal_want_verbs,
   $opal_verbs_dir, $opal_verbs_libdir, which will be set as follows:
   * opal_want_verbs will be "yes" and opal_verbs_dir and
     opal_verbs_libdir will both be set to directory values, '''OR'''
   * opal_want_verbs will be "no" and opal_verbs_dir and
     opal_verbs_libdir will both be set empty

This commit was SVN r26640.
2012-06-22 19:53:56 +00:00
Nathan Hjelm
6a0ccf41e6 one more file
This commit was SVN r26638.
2012-06-22 18:21:57 +00:00
Ralph Castain
e6f3586415 Remove the orte notifier framework, per discussion at the devel meeting and follow-up with Jeff (who took the action item)
This commit was SVN r26637.
2012-06-22 18:09:23 +00:00
Nathan Hjelm
03f00c42b8 fix udapl compile problems from r26626
This commit was SVN r26635.

The following SVN revision numbers were found above:
  r26626 --> open-mpi/ompi@249066e06d
2012-06-22 14:20:45 +00:00
Nathan Hjelm
77f7171186 remove hdr_segkey from OMPI_OSC_RDMA_BASE_HDR_NTOH and OMPI_OSC_RDMA_BASE_HDR_HTON
This commit was SVN r26634.
2012-06-22 14:15:26 +00:00
Nathan Hjelm
249066e06d Timeout! Per RFC update the BTL interface to hide segment keys. All BTLs (with the exception of wv), all relevant PMLs, and osc/rdma have been updated for the new interface.
This commit was SVN r26626.
2012-06-21 17:09:12 +00:00
Brian Barrett
9af72072a3 Use MKDIR_P instead of mkdir_p in Makefiles, as MKDIR_P is the only one
defined in recent versions of AC/AM.

This commit was SVN r26625.
2012-06-21 16:52:37 +00:00
Ralph Castain
1e1c755fbc Remove non-existant windows file
This commit was SVN r26624.
2012-06-21 01:37:36 +00:00
Nathan Hjelm
e3bc6c0f73 btl/ugni: use grdma mpool to take advantage of shared lru
This commit was SVN r26623.
2012-06-20 23:03:59 +00:00
Nathan Hjelm
3d86b5055e btl/ugni: don't call opal_convertor_pack if there is nothing to pack
This commit was SVN r26622.
2012-06-20 23:01:37 +00:00
Nathan Hjelm
f5fd87a446 mpool/grdma: temporarily remove support for remote (local) process eviction and remove ignore.
This commit was SVN r26621.
2012-06-20 23:00:25 +00:00
Terry Dontje
0343dfee77 Add library check for libosmcomp when openib dynamic SL is enabled.
This commit was SVN r26619.
2012-06-19 17:45:56 +00:00
Ralph Castain
0a713cd27e Add database framework to ORTE and refactor modex code to utilize it. Create the "hash" db component from the prior modex db code. Leave the other components ignored for now - will activate them later.
Modex is still a blocking operation at this point.

This commit was SVN r26618.
2012-06-19 13:38:42 +00:00
Yevgeny Kliteynik
df783c0472 Precise speed of FDR and EDR
This commit was SVN r26614.
2012-06-17 07:06:37 +00:00
Ralph Castain
9e0bb6ae28 Revert r26600 and r26601 for a couple of reasons:
1. they modified the OMPI-ORTE interface, which is something I promised to avoid doing unless absolutely necessary, and

2. the framework ident is already in the component name key provided to the modex db. What is missing is the project ident, but as Jeff and I discussed last week, we really need to add that field to the component struct anyway to avoid multi-project collisions on framework names. That will be done over the next couple of weeks as a separate effort.

This commit was SVN r26613.

The following SVN revision numbers were found above:
  r26600 --> open-mpi/ompi@5ba4deff07
  r26601 --> open-mpi/ompi@0e3094c318
2012-06-16 09:11:03 +00:00
Nathan Hjelm
fbd1636ea4 fix seg fault when size == 0
This commit was SVN r26612.
2012-06-15 16:58:23 +00:00
Rolf vandeVaart
d6881f3a4f Rename one function. Add some new functions that can support asynchronous CUDA copies.
This commit was SVN r26611.
2012-06-15 16:56:30 +00:00
Brian Barrett
defaefd59e Clean up resources from flowcontrol on shutdown
This commit was SVN r26605.
2012-06-14 22:38:35 +00:00
Brian Barrett
946ec4cd97 * Update usage of PtlHandleIsEqual to match new semantic
* Properly set message to MPI_MESSAGE_NULL in the right places
* Fix double free of buffer for non-contiguous blocking sends
* Remove useless debugging output

This commit was SVN r26604.
2012-06-14 22:24:23 +00:00
Nathan Hjelm
0d13cbf11c ob1: bug fix. put fallback on send never actually worked. fixed.
This commit was SVN r26602.
2012-06-14 17:29:58 +00:00
Ralph Castain
5ba4deff07 Extend the modex database to support multiple projects and frameworks that might have duplicate component names. No visible API change in the BTL's as it was executed solely in the ompi modex code.
This commit was SVN r26600.
2012-06-14 02:55:06 +00:00
Terry Dontje
634fc278d9 Fix issue with sctp config scripts not detecting netinet/in.h dependency. Also removing tabs from sctp m4 file
This commit was SVN r26599.
2012-06-13 10:38:28 +00:00
Nathan Hjelm
a809881f78 ob1: reset the converter after a failed sendi before trying send
This commit was SVN r26597.
2012-06-12 15:44:47 +00:00
Ralph Castain
269cb2b8d9 Some cleanup to remove calls to opal_progress when running with orte progress threads, and to ensure that all orte-related events are in the orte event base.
This commit was SVN r26591.
2012-06-11 19:59:53 +00:00
Brian Barrett
31279eb641 Fix segfault with long expected messages when using the rndv protocol. We were
freeing the ME before the get to grab the long part of the message.

This commit was SVN r26589.
2012-06-11 16:37:01 +00:00
Brian Barrett
7406ef1241 Make all the PMI components depend on the common pmi library and properly
install the common pmi library

This commit was SVN r26588.
2012-06-11 15:58:09 +00:00
Jeff Squyres
13707ec0af Remove this comment: it turns out that the benefit was to make
multiple SM ''modules'', not multiple SM ''mpools''.

This commit was SVN r26584.
2012-06-08 22:37:26 +00:00
Jeff Squyres
5451ee46bd Per r26575, the sync coll module is no longer necessary!
(the crowd goes wild)

This commit was SVN r26583.

The following SVN revision numbers were found above:
  r26575 --> open-mpi/ompi@59e529cf1d
2012-06-08 19:19:19 +00:00
Ralph Castain
1c246f28f3 Make the "mpi_preconnect_mpi" param invisible as it is only to be used for rare, poorly behaved applications
This commit was SVN r26581.
2012-06-08 00:38:38 +00:00
Nathan Hjelm
59e529cf1d ob1: as per developer discussion disable rdma retries. the failure path currently suffers from live-lock
This commit was SVN r26575.
2012-06-07 23:31:20 +00:00
Nathan Hjelm
4c6be00de2 fix erroneous commit in rdma mpool
This commit was SVN r26572.
2012-06-07 20:01:44 +00:00
Nathan Hjelm
ceee4bcb0d libevent2019: libevent_pthreads.la is never built. don't include it
This commit was SVN r26570.
2012-06-07 19:22:45 +00:00
Jeff Squyres
56a537a5f5 This component wasn't even in 1.5.0; no one has had a GM network in
forever.  There is no point in carrying this component forward.

This commit was SVN r26563.
2012-06-06 21:43:54 +00:00
Shiqing Fan
aa6cde9886 Change f77 to fortran for the rest of windows build files.
This commit was SVN r26558.
2012-06-06 14:09:51 +00:00
Mike Dubman
10831e111a detect num of local procs
This commit was SVN r26555.
2012-06-05 09:13:16 +00:00
Mike Dubman
e9c274f3b9 raise cm prio for mxm as well, somehow was removed from 1.7, exists in 1.6
This commit was SVN r26554.
2012-06-05 09:02:03 +00:00
Matthias Jurenz
ee735e5f9c Changes to VT:
- fixed build issue on Solaris 10 (reported in http://www.open-mpi.org/community/lists/users/2012/05/19396.php)

This commit was SVN r26553.
2012-06-05 07:54:58 +00:00
Yevgeny Kliteynik
1cbce83ece Fixed wording of MXM parameters as suggested By Jeff.
This commit was SVN r26545.
2012-06-03 21:48:42 +00:00
Yevgeny Kliteynik
f02bf707a4 Added MXM parameter "np" that controls the minimal number of processes that allow MXM to run
Default: 128

MXM advantages kick in with large number of processes.

This commit was SVN r26544.
2012-06-02 11:07:20 +00:00
Eugene Loh
e91d3a6f13 Fix test that checked whether C data type matched Fortran REAL*16.
The test was comparing 1.1L to Fortran's 1.1, which was sometimes
a single-precision/truncated value, even if stored in a REAL*16 word.

This commit was SVN r26543.
2012-06-01 23:33:00 +00:00
Jeff Squyres
8d161af059 Move hwloc_cpuset_t prettyprint routines down into the hwloc base:
* opal_hwloc_base_cset2str(): Make a human-readable string of a
   hwloc_cpuset_t (e.g., socket 2[core 3[hwt 1]])
 * opal_hwloc_base_cset2mapstr(): Make a map-like string of a
   hwloc_cpuset_t (e.g., [B./..])

This commit was SVN r26532.
2012-06-01 16:02:18 +00:00
Nathan Hjelm
71bffa5158 ugni: update to latest btl code. bug fixes and cleanup
This commit was SVN r26529.
2012-05-31 20:02:41 +00:00
Edgar Gabriel
3ccd286de1 silence a compiler warning for optimized builds.
This commit was SVN r26528.
2012-05-31 13:32:10 +00:00
Jeff Squyres
a5e46a83ad Fixes trac:3109: patch from Patrick LeDot/Bull -- fix MPI_COMPLEX8, 16,
and 32.

This commit was SVN r26527.

The following Trac tickets were found above:
  Ticket 3109 --> https://svn.open-mpi.org/trac/ompi/ticket/3109
2012-05-30 14:08:30 +00:00
Vishwanath Venkatesan
86a57c7b66 Initializing sorted_file_offsets to NULL
This commit was SVN r26526.
2012-05-30 06:56:40 +00:00
Jeff Squyres
99c5afb397 Remove clang compiler warnings.
This commit was SVN r26523.
2012-05-29 23:36:06 +00:00
Terry Dontje
951131b58d add exit code to mpijavac dependent on the result of javac command
This commit was SVN r26515.
2012-05-29 18:44:08 +00:00
Jeff Squyres
91bae49090 A bunch of fixes to the f08 bindings:
* Add in a bunch of missinc MPI_Op pre-defined constants
 * Fix a few parameter types
 * Ensure that MPI_Op handles have the same values in all interfaces
   (i.e., add them to the mpif-common.pl generator script)

This commit was SVN r26511.
2012-05-29 17:54:33 +00:00
Edgar Gabriel
d1e91e9372 make the file compile properly.
This commit was SVN r26497.
2012-05-26 01:06:36 +00:00
George Bosilca
3704bfccbe The sum of the local and remote recvcounts is identical (per MPI standard
requirement) so the recvcounts array is bounded by the number of
participants in the local group.

This commit was SVN r26496.
2012-05-25 04:27:19 +00:00
Terry Dontje
19992f80f0 use OMPI_ARRAY_LOGICAL_2_INT_CLEANUP instead of free
This commit was SVN r26494.
2012-05-24 21:06:03 +00:00
Brian Barrett
2effbb1ba6 fix copy/paste typo
This commit was SVN r26492.
2012-05-24 16:06:20 +00:00
Ralph Castain
c0304eb23a Fix copy/paste typo
This commit was SVN r26491.
2012-05-24 15:47:20 +00:00
George Bosilca
5ff74babc6 Correctly use remote size where necessary. Completements the
patches for ticket #3105.

This commit was SVN r26490.
2012-05-24 13:41:51 +00:00
Jeff Squyres
4bda5da63a Similar to r26488, also update the param error checking for
REDUCE_SCATTER, SCATTERV, and GATHERV.  Thanks to the mpi4py community
for reporting the issue.

This commit was SVN r26489.

The following SVN revision numbers were found above:
  r26488 --> open-mpi/ompi@42793aa10f
2012-05-24 13:26:44 +00:00
Jeff Squyres
42793aa10f As reported by the mpi4py community (Bennet Fauber, Lisandro Dalcin,
Jonathan Dursi), fix a bug in the parameter verification of
MPI_ALLGATHERV: ensure to use the ''remote'' group size when checking
the recvcounts array.

This commit was SVN r26488.
2012-05-24 10:25:21 +00:00
Ralph Castain
31beff6362 Oops - if we don't want the Java bindings, then we really shouldn't be building them :-/
Also ensure we don't try to build them if no Java support was found, and error out if the user requests the bindings and we didn't find Java support.

Add a configure flag to skip the Java tests and just force-set the Java support to "disabled"

This commit was SVN r26484.
2012-05-23 19:51:27 +00:00
Matthias Jurenz
54d67f3957 Changes to VT:
- corrected Fortran MPI lib. name for OMPI 1.7 (-lmpi_f77 -> -lmpi_mpifh)

This commit was SVN r26477.
2012-05-23 09:06:22 +00:00
Matthias Jurenz
bf7e00b787 - corrected underlying compiler command for mpifort-vt (@FC@ -> vtf90)
- removed useless mpi<f77|f90>-vt-wrapper-data.txt

This commit was SVN r26474.
2012-05-23 08:55:00 +00:00
Nathan Hjelm
cdc3c87ba6 move pmi init/finalize into a common component
This commit was SVN r26470.
2012-05-22 15:15:39 +00:00
George Bosilca
e890a8379b Various minor cleanups.
This commit was SVN r26461.
2012-05-21 13:15:24 +00:00
Brian Barrett
25693363e9 * Fix internal accounting error regarding number of available credits
* Use a single MD covering all of address space for put transfers, rather
 than a per-send MD.

This commit was SVN r26458.
2012-05-20 23:42:26 +00:00
Vishwanath Venkatesan
8d4bb65bd4 Modifying the explicit operations to make it absolute
This commit was SVN r26451.
2012-05-18 21:43:34 +00:00
Vishwanath Venkatesan
cbad31cc88 1. Freeing the displs array after allgatherv to avoid segmentation faults in dynamic segmentation
2. Checking for 0 bytes datatypes  and sending only when data available to avoid 0 byte messages being sent and received. 
3. Changing timing extraction to support calculating, min, max and avg communication costs + min and avg write costs

This commit was SVN r26450.
2012-05-18 21:39:58 +00:00
Rolf vandeVaart
f8ace21366 Rename a few things for clarity. Add a stream.
This commit was SVN r26447.
2012-05-17 18:10:59 +00:00
Jeff Squyres
5fb48bafda Fixes trac:3093: when cleaning up, only reset items in the
ompi_mpi_errcodes array to NULL if the index is not MPI_UNDEFINED.
Thanks to Alexey Bayduraev for the patch.

This commit was SVN r26446.

The following Trac tickets were found above:
  Ticket 3093 --> https://svn.open-mpi.org/trac/ompi/ticket/3093
2012-05-16 15:26:32 +00:00
Jeff Squyres
2cf8b874d5 Oops -- forgot to include file_get_position_shared in r26439.
This commit was SVN r26442.

The following SVN revision numbers were found above:
  r26439 --> open-mpi/ompi@d74795b299
2012-05-15 19:51:15 +00:00
Rolf vandeVaart
c228bd2311 Fix broken compile. Keep in sync with sm btl.
This commit was SVN r26440.
2012-05-15 15:32:33 +00:00