Mpirun - and the orteds - were doing their best to whack all session dirs on their nodes just in case there was something lingering due to an abnormal termination. Unfortunately, they were -too- good at it. They were whacking all session directories under the user's name, even those from other mpiruns!
This adds another layer to the session dir tree so that we can denote which jobs come from our own job family, and restricts the cleanup operation to only session dirs from within our own job family. So we'll still cleanup anything due to our own mpirun, but won't whack any other mpirun from this user.
Call it being polite...
This commit was SVN r19083.
that by decreasing the btl_inuse if there was already a registered BTL we basically reset
the changes for this new BTL to register it's progress function, even if it was supposed to
handle another peer.
This commit was SVN r19080.
* add "register" function to mca_base_component_t
* converted coll:basic and paffinity:linux and paffinity:solaris to
use this function
* we'll convert the rest over time (I'll file a ticket once all
this is committed)
* add 32 bytes of "reserved" space to the end of mca_base_component_t
and mca_base_component_data_2_0_0_t to make future upgrades
[slightly] easier
* new mca_base_component_t size: 196 bytes
* new mca_base_component_data_2_0_0_t size: 36 bytes
* MCA base version bumped to v2.0
* '''We now refuse to load components that are not MCA v2.0.x'''
* all MCA frameworks versions bumped to v2.0
* be a little more explicit about version numbers in the MCA base
* add big comment in mca.h about versioning philosophy
This commit was SVN r19073.
The following Trac tickets were found above:
Ticket 1392 --> https://svn.open-mpi.org/trac/ompi/ticket/1392
have/need lseek64" issue. This fix is also included in MPICH2 after
v1.0.7.
This commit was SVN r19070.
The following Trac tickets were found above:
Ticket 1419 --> https://svn.open-mpi.org/trac/ompi/ticket/1419
"make distclean". It's not clear whether it's an Automake bug or
whether what I did simply is not supported (I've got pending mail into
Ralf W. asking about it). The short version is that during "make
distclean", ompi/mpi/f77/Makefile would rm -rf ompi/mpi/f77/.deps.
But ompi/Makefile still include's some .Plo files from that directory,
so Bad Things happened when "make distclean" unrolled from the
ompi/mpi/f77 dir back up to the ompi/ dir.
So I went with George's original suggestion and moved the f77 "base"
files in question into a new directory: ompi/mpi/f77/base and put a
Makefile.include in there. That way, this directory is not traversed
twice by distclean, and .deps is only removed when it is supposed to
be. Maybe we'll be able to do it a little better someday, but that's
the way it is now.
I'll check this with a fresh checkout once this is committed to SVN as
well; some of these kinds of problems don't show up until you do a
build from a completely fresh SVN checkout.
This commit was SVN r19054.
The following SVN revision numbers were found above:
r19040 --> open-mpi/ompi@9f4d4c4312
SVN version (r19045), but I also edited the svn:ignore to ignore these
files in the same SVN commit -- I suspect that SVN got confused and
did not actually delete them.
This commit was SVN r19048.
The following SVN revision numbers were found above:
r19045 --> open-mpi/ompi@63b63d48c3
Update the version of ROMIO to that which was contained in
MPICH2-1.0.7, plus a few patches from the upstream ROMIO maintainers
(because OMPI uses a few code paths in ROMIO that MPICH2 does not;
there were a few compile bugs in the ROMIO from MPICH2-1.0.7).
Added an info MCA param to be able to tell which version of ROMIO is
contained in OMPI: io_romio_version.
Many, many thanks to romio-maint@mcs.anl.gov for all their help in
integrating this new version of ROMIO into Open MPI.
This commit was SVN r19045.
The following Trac tickets were found above:
Ticket 1370 --> https://svn.open-mpi.org/trac/ompi/ticket/1370
Cleanup the logic in the odls for when processes terminate. It turns out that we were only going through the kill_proc logic once instead of looping over all local children when we ordered a daemon to kill its local procs. This went unnoticed for some time as for most systems the local procs were terminated anyway when the daemon terminated due to the parent/child relationship.
Solaris is apparently different - the children are not automatically terminated when the parent dies. As a result, it acts as a detector for this bug.
Mucho thanks to Rolf V. for his help in debugging - and to IM for letting me follow his gdb progress in quasi real-time!
This commit was SVN r19044.
are properly linked against libmpi.la.
This required a little creative AM usage, inspired by discussion on
OMPI devel list:
* Make a new ompi/mpi/f77/Makefile_f77base.include; effectively move
the building of the f77 "base" glue stuff (libmpi_f77base.la) into
this Makefile and away from ompi/mpi/f77/Makefile.am. The sources
in question require some specific CPPFLAGS, so we couldn't just add
the raw sources into libmpi_la_SOURCES, unfortunately.
* Include this new Makefile in the top-level ompi/Makefile.am
* The libmpi_f77base.la LT convenience library was already sucked
into libmpi.la; breaking it out into its own Makefile allows us
to build it earlier and therefore complete buidling libmpi.la
earlier.
* Side effect: the ompi/mpi/Makefile.am is now mostly unnecessary; it
no longer specifies a SUBDIRS for each of the bindings directories
to traverse into (since they are now in the top-level SUBDIRS). As
such, the man pages are now also now included in the top-level
ompi/Makefile.am.
The end of the result is that libmpi.la -- including a few sources
from mpi/f77 -- is fully built before the C++, F77, and F90 bindings
are built. Therefore, the C++, F77, and F90 bindings libraries can
all link against libmpi.la.
This commit was SVN r19040.
The following Trac tickets were found above:
Ticket 1409 --> https://svn.open-mpi.org/trac/ompi/ticket/1409
lsb_launch tampers with SIGCHLD signal handler. We are forced to reinstall our own signal handler after a call to this function.
This commit fixes trac:1356.
This commit was SVN r19033.
The following Trac tickets were found above:
Ticket 1356 --> https://svn.open-mpi.org/trac/ompi/ticket/1356
Fix a few bugs in the mappers:
1. Ensure that bynode with no -np fills all available slots - it just does so with the ranks set bynode instead of byslot
2. fix --nolocal behavior so it works correctly in all cases. We still have to test the host's name using opal_ifislocal in the mapper because the name returned by gethostname to orte_process_info.hostname can be an FQDN, but a hostfile may contain a non-FQDN version.
3. Add missing --nolocal logic to the seq mapper
Oversubscribed mapping seemed to be working okay without repair, so I couldn't verify my own bug report in that regard.
Also included are some preliminary changes to support the modified hostfile behavior, which will be committed shortly:
1. removed the totally useless "allocate" field in the orte_node_t object since every node is automatically allocated for use - and everything ignored the field anyway
2. correctly initialize the slots_alloc field when the allocation is read
This commit was SVN r19030.
* Use synonym/deprecated MCA param API for some mca base params
* In openib BTL, if we have appropriate memory hooks support, and if
mpi_leave_pinned and mpi_leave_pinned_pipeline were not set by the
user, set mpi_leave_pinned to 1.
* Defer checking mpi_leave_pinned_* until as late as possible (i.e.,
until after the btl's have had a chance to set mpi_leave_pinned to
1):
* in ob1 pml
* in rdma mpool
This commit was SVN r19022.
The following Trac tickets were found above:
Ticket 1379 --> https://svn.open-mpi.org/trac/ompi/ticket/1379
Kinda found by MTT. MTT calls 'ompi_info --all --parsable' and it was livelocked and had to be killed by hand.
I'm going to push this one to Jeff to push to v1.3 since he did the original implementation and should check this code.
This commit was SVN r19014.
a little bit more than "BTL was able to add some procs". The real condition to
allow the BTL progress is that we will use it to send/recv data to/from some
of the peers (this include the BTL exclusivity in the process).
This commit was SVN r19010.
Modify the odls to remove a (size_t) typecast in front of the num_processors variable just in case it is returned negative. This usually is accompanied by an opal_error, so this shouldn't make any difference - but it is more technically correct.
This commit was SVN r19008.
Fixed allocation of all ranks when using RANKFILE, but not all ranks assigned
Aborting if using RANKFILE, but np wasn't specified a little earlier
Clean mca_rmaps_rank_file_component.debug
This commit was SVN r19004.
* Fix linux paffinity component to make a "best" guess when PLPA
can't find topology information in the Linux kernel. That is, if
PLPA can't tell us the max_processor_id, just assume that it's the
same as the number of processors. If you have a more complex
system than that (e.g., you have holes in your available processor
IDs), you'll likely be running a Linux kernel that supports the
topology information, and this problem won't happen.
* Make sure to conver the return codes from PLPA to OPAL_ERR* codes.
This commit was SVN r19001.
The following Trac tickets were found above:
Ticket 1250 --> https://svn.open-mpi.org/trac/ompi/ticket/1250
