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openmpi/ompi/mca/common/ompio/common_ompio_buffer.c
Edgar Gabriel ff130e7a9c ompio: resync v4.1 branch to master
this commit syncs ompio related directories in v4.1.x to master. The efforts to bring the lustre performance fixes and support for external32 data representation over were too overwhelming when dealing with every single pr individually.

There are a very few minor modification that had to be done for syncing:
 - v4.1.x does not have opal/mutex.h
 - v4.1.x does not have opal_atomic_int32_t datatype
 - the io module structure has two fewer function pointers (related to info_set/get) compared to the version on master.

Tested so far with the ompio testsuite as well as hdf5-1.10.5 testsuite (testphdf5, t_shapesame, t_bigio) on an XFS file system.
More tests on Lustre and BeeGFS to follow.

Signed-off-by: Edgar Gabriel <egabriel@central.uh.edu>
2020-12-17 17:44:26 -06:00

172 строки
5.5 KiB
C

/*
* Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana
* University Research and Technology
* Corporation. All rights reserved.
* Copyright (c) 2004-2016 The University of Tennessee and The University
* of Tennessee Research Foundation. All rights
* reserved.
* Copyright (c) 2004-2005 High Performance Computing Center Stuttgart,
* University of Stuttgart. All rights reserved.
* Copyright (c) 2004-2005 The Regents of the University of California.
* All rights reserved.
* Copyright (c) 2008-2019 University of Houston. All rights reserved.
* $COPYRIGHT$
*
* Additional copyrights may follow
*
* $HEADER$
*/
#include "ompi_config.h"
#include "opal/datatype/opal_convertor.h"
#include "opal/datatype/opal_datatype_cuda.h"
#include "opal/mca/common/cuda/common_cuda.h"
#include "opal/util/sys_limits.h"
#include "opal/mca/allocator/allocator.h"
#include "opal/mca/allocator/base/base.h"
#include "common_ompio.h"
#include "common_ompio_buffer.h"
static opal_mutex_t mca_common_ompio_buffer_mutex; /* lock for thread safety */
static mca_allocator_base_component_t* mca_common_ompio_allocator_component=NULL;
static mca_allocator_base_module_t* mca_common_ompio_allocator=NULL;
//static opal_atomic_int32_t mca_common_ompio_buffer_init = 0;
static int32_t mca_common_ompio_buffer_init = 0;
static int32_t mca_common_ompio_pagesize=4096;
static void* mca_common_ompio_buffer_alloc_seg ( void *ctx, size_t *size );
static void mca_common_ompio_buffer_free_seg ( void *ctx, void *buf );
#if OPAL_CUDA_SUPPORT
void mca_common_ompio_check_gpu_buf ( ompio_file_t *fh, const void *buf, int *is_gpu,
int *is_managed)
{
opal_convertor_t convertor;
*is_gpu=0;
*is_managed=0;
convertor.flags=0;
if ( opal_cuda_check_one_buf ( (char *)buf, &convertor ) ) {
*is_gpu = 1;
if ( convertor.flags & CONVERTOR_CUDA_UNIFIED ){
*is_managed =1;
}
}
return;
}
#endif
static void* mca_common_ompio_buffer_alloc_seg ( void*ctx, size_t *size )
{
char *buf=NULL;
size_t realsize, numpages;
numpages = (*size + mca_common_ompio_pagesize -1 )/mca_common_ompio_pagesize;
realsize = numpages * mca_common_ompio_pagesize;
buf = malloc ( realsize);
#if OPAL_CUDA_SUPPORT
if ( NULL != buf ) {
mca_common_cuda_register ( ( char *)buf, realsize, NULL );
}
#endif
*size = realsize;
return buf;
}
static void mca_common_ompio_buffer_free_seg ( void *ctx, void *buf )
{
if ( NULL != buf ) {
#if OPAL_CUDA_SUPPORT
mca_common_cuda_unregister ( (char *) buf, NULL );
#endif
free ( buf );
}
return;
}
int mca_common_ompio_buffer_alloc_init ( void )
{
bool thread_safe=true;
if(OPAL_THREAD_ADD_FETCH32(&mca_common_ompio_buffer_init, 1) > 1)
return OMPI_SUCCESS;
/* initialize static objects */
OBJ_CONSTRUCT(&mca_common_ompio_buffer_mutex, opal_mutex_t);
OPAL_THREAD_LOCK (&mca_common_ompio_buffer_mutex );
/* lookup name of the allocator to use */
if(NULL == (mca_common_ompio_allocator_component = mca_allocator_component_lookup("basic"))) {
OPAL_THREAD_UNLOCK(&mca_common_ompio_buffer_mutex);
return OMPI_ERR_BUFFER;
}
/* create an instance of the allocator */
mca_common_ompio_allocator = mca_common_ompio_allocator_component->allocator_init(thread_safe,
mca_common_ompio_buffer_alloc_seg,
mca_common_ompio_buffer_free_seg,
NULL);
if(NULL == mca_common_ompio_allocator) {
OPAL_THREAD_UNLOCK(&mca_common_ompio_buffer_mutex);
return OMPI_ERR_BUFFER;
}
mca_common_ompio_pagesize = opal_getpagesize();
OPAL_THREAD_UNLOCK(&mca_common_ompio_buffer_mutex);
return OMPI_SUCCESS;
}
int mca_common_ompio_buffer_alloc_fini ( void )
{
if ( NULL != mca_common_ompio_allocator ) {
OPAL_THREAD_LOCK (&mca_common_ompio_buffer_mutex);
mca_common_ompio_allocator->alc_finalize(mca_common_ompio_allocator);
mca_common_ompio_allocator=NULL;
OPAL_THREAD_UNLOCK (&mca_common_ompio_buffer_mutex);
OBJ_DESTRUCT (&mca_common_ompio_buffer_mutex);
}
return OMPI_SUCCESS;
}
void *mca_common_ompio_alloc_buf ( ompio_file_t *fh, size_t bufsize )
{
char *tmp=NULL;
if ( !mca_common_ompio_buffer_init ){
mca_common_ompio_buffer_alloc_init ();
}
OPAL_THREAD_LOCK (&mca_common_ompio_buffer_mutex);
tmp = mca_common_ompio_allocator->alc_alloc (mca_common_ompio_allocator,
bufsize, 0 );
OPAL_THREAD_UNLOCK (&mca_common_ompio_buffer_mutex);
return tmp;
}
void mca_common_ompio_release_buf ( ompio_file_t *fh, void *buf )
{
if ( !mca_common_ompio_buffer_init ){
/* Should not happen. You can not release a buf without
** having it allocated first.
*/
opal_output (1, "error in mca_common_ompio_release_buf: allocator not initialized\n");
}
OPAL_THREAD_LOCK (&mca_common_ompio_buffer_mutex);
mca_common_ompio_allocator->alc_free (mca_common_ompio_allocator,
buf);
OPAL_THREAD_UNLOCK (&mca_common_ompio_buffer_mutex);
return;
}