
Passed the below set of symbols into a script that added ompi_ to them all. Note that if processing a symbol named "foo" the script turns foo into ompi_foo but doesn't turn foobar into ompi_foobar But beyond that the script is blind to C syntax, so it hits strings and comments etc as well as vars/functions. coll_base_comm_get_reqs comm_allgather_pml comm_allreduce_pml comm_bcast_pml fcoll_base_coll_allgather_array fcoll_base_coll_allgatherv_array fcoll_base_coll_bcast_array fcoll_base_coll_gather_array fcoll_base_coll_gatherv_array fcoll_base_coll_scatterv_array fcoll_base_sort_iovec mpit_big_lock mpit_init_count mpit_lock mpit_unlock netpatterns_base_err netpatterns_base_verbose netpatterns_cleanup_narray_knomial_tree netpatterns_cleanup_recursive_doubling_tree_node netpatterns_cleanup_recursive_knomial_allgather_tree_node netpatterns_cleanup_recursive_knomial_tree_node netpatterns_init netpatterns_register_mca_params netpatterns_setup_multinomial_tree netpatterns_setup_narray_knomial_tree netpatterns_setup_narray_tree netpatterns_setup_narray_tree_contigous_ranks netpatterns_setup_recursive_doubling_n_tree_node netpatterns_setup_recursive_doubling_tree_node netpatterns_setup_recursive_knomial_allgather_tree_node netpatterns_setup_recursive_knomial_tree_node pml_v_output_close pml_v_output_open intercept_extra_state_t odls_base_default_wait_local_proc _event_debug_mode_on _evthread_cond_fns _evthread_id_fn _evthread_lock_debugging_enabled _evthread_lock_fns cmd_line_option_t cmd_line_param_t crs_base_self_checkpoint_fn crs_base_self_continue_fn crs_base_self_restart_fn event_enable_debug_output event_global_current_base_ event_module_include eventops sync_wait_mt trigger_user_inc_callback var_type_names var_type_sizes Signed-off-by: Mark Allen <markalle@us.ibm.com>
169 строки
6.6 KiB
C
169 строки
6.6 KiB
C
/*
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* Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana
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* University Research and Technology
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* Corporation. All rights reserved.
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* Copyright (c) 2004-2016 The University of Tennessee and The University
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* of Tennessee Research Foundation. All rights
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* reserved.
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* Copyright (c) 2004-2005 High Performance Computing Center Stuttgart,
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* University of Stuttgart. All rights reserved.
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* Copyright (c) 2004-2005 The Regents of the University of California.
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* All rights reserved.
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* Copyright (c) 2014-2016 Research Organization for Information Science
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* and Technology (RIST). All rights reserved.
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* Copyright (c) 2017 IBM Corporation. All rights reserved.
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* $COPYRIGHT$
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*
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* Additional copyrights may follow
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*
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* $HEADER$
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*/
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#include "ompi_config.h"
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#include "coll_basic.h"
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#include <stdlib.h>
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#include "mpi.h"
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#include "ompi/constants.h"
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#include "ompi/datatype/ompi_datatype.h"
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#include "ompi/mca/coll/coll.h"
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#include "ompi/mca/pml/pml.h"
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#include "ompi/mca/coll/base/coll_tags.h"
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#include "coll_basic.h"
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/*
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* allgather_inter
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*
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* Function: - allgather using other MPI collections
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* Accepts: - same as MPI_Allgather()
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* Returns: - MPI_SUCCESS or error code
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*/
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int
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mca_coll_basic_allgather_inter(const void *sbuf, int scount,
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struct ompi_datatype_t *sdtype,
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void *rbuf, int rcount,
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struct ompi_datatype_t *rdtype,
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struct ompi_communicator_t *comm,
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mca_coll_base_module_t *module)
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{
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int rank, root = 0, size, rsize, err, i, line;
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char *tmpbuf_free = NULL, *tmpbuf, *ptmp;
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ptrdiff_t rlb, rextent, incr;
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ptrdiff_t gap, span;
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ompi_request_t *req;
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ompi_request_t **reqs = NULL;
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rank = ompi_comm_rank(comm);
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size = ompi_comm_size(comm);
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rsize = ompi_comm_remote_size(comm);
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/* Algorithm:
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* - a gather to the root in remote group (simultaniously executed,
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* thats why we cannot use coll_gather).
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* - exchange the temp-results between two roots
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* - inter-bcast (again simultanious).
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*/
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/* Step one: gather operations: */
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if (rank != root) {
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/* send your data to root */
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err = MCA_PML_CALL(send(sbuf, scount, sdtype, root,
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MCA_COLL_BASE_TAG_ALLGATHER,
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MCA_PML_BASE_SEND_STANDARD, comm));
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if (OMPI_SUCCESS != err) { line = __LINE__; goto exit; }
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} else {
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/* receive a msg. from all other procs. */
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err = ompi_datatype_get_extent(rdtype, &rlb, &rextent);
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if (OMPI_SUCCESS != err) { line = __LINE__; goto exit; }
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/* Get a requests arrays of the right size */
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reqs = ompi_coll_base_comm_get_reqs(module->base_data, rsize + 1);
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if( NULL == reqs ) { line = __LINE__; err = OMPI_ERR_OUT_OF_RESOURCE; goto exit; }
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/* Do a send-recv between the two root procs. to avoid deadlock */
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err = MCA_PML_CALL(isend(sbuf, scount, sdtype, 0,
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MCA_COLL_BASE_TAG_ALLGATHER,
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MCA_PML_BASE_SEND_STANDARD,
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comm, &reqs[rsize]));
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if (OMPI_SUCCESS != err) { line = __LINE__; goto exit; }
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err = MCA_PML_CALL(irecv(rbuf, rcount, rdtype, 0,
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MCA_COLL_BASE_TAG_ALLGATHER, comm,
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&reqs[0]));
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if (OMPI_SUCCESS != err) { line = __LINE__; goto exit; }
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incr = rextent * rcount;
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ptmp = (char *) rbuf + incr;
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for (i = 1; i < rsize; ++i, ptmp += incr) {
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err = MCA_PML_CALL(irecv(ptmp, rcount, rdtype, i,
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MCA_COLL_BASE_TAG_ALLGATHER,
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comm, &reqs[i]));
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if (MPI_SUCCESS != err) { line = __LINE__; goto exit; }
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}
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err = ompi_request_wait_all(rsize + 1, reqs, MPI_STATUSES_IGNORE);
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if (OMPI_SUCCESS != err) { line = __LINE__; goto exit; }
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/* Step 2: exchange the resuts between the root processes */
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span = opal_datatype_span(&sdtype->super, (int64_t)scount * (int64_t)size, &gap);
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tmpbuf_free = (char *) malloc(span);
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if (NULL == tmpbuf_free) { line = __LINE__; err = OMPI_ERR_OUT_OF_RESOURCE; goto exit; }
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tmpbuf = tmpbuf_free - gap;
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err = MCA_PML_CALL(isend(rbuf, rsize * rcount, rdtype, 0,
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MCA_COLL_BASE_TAG_ALLGATHER,
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MCA_PML_BASE_SEND_STANDARD, comm, &req));
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if (OMPI_SUCCESS != err) { line = __LINE__; goto exit; }
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err = MCA_PML_CALL(recv(tmpbuf, size * scount, sdtype, 0,
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MCA_COLL_BASE_TAG_ALLGATHER, comm,
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MPI_STATUS_IGNORE));
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if (OMPI_SUCCESS != err) { line = __LINE__; goto exit; }
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err = ompi_request_wait( &req, MPI_STATUS_IGNORE);
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if (OMPI_SUCCESS != err) { line = __LINE__; goto exit; }
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}
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/* Step 3: bcast the data to the remote group. This
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* happens in both groups simultaneously, thus we can
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* not use coll_bcast (this would deadlock).
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*/
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if (rank != root) {
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/* post the recv */
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err = MCA_PML_CALL(recv(rbuf, rsize * rcount, rdtype, 0,
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MCA_COLL_BASE_TAG_ALLGATHER, comm,
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MPI_STATUS_IGNORE));
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if (OMPI_SUCCESS != err) { line = __LINE__; goto exit; }
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} else {
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/* Send the data to every other process in the remote group
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* except to rank zero. which has it already. */
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for (i = 1; i < rsize; i++) {
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err = MCA_PML_CALL(isend(tmpbuf, size * scount, sdtype, i,
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MCA_COLL_BASE_TAG_ALLGATHER,
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MCA_PML_BASE_SEND_STANDARD,
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comm, &reqs[i - 1]));
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if (OMPI_SUCCESS != err) { line = __LINE__; goto exit; }
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}
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err = ompi_request_wait_all(rsize - 1, reqs, MPI_STATUSES_IGNORE);
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if (OMPI_SUCCESS != err) { line = __LINE__; goto exit; }
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}
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exit:
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if( MPI_SUCCESS != err ) {
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OPAL_OUTPUT( (ompi_coll_base_framework.framework_output,"%s:%4d\tError occurred %d, rank %2d",
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__FILE__, line, err, rank) );
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(void)line; // silence compiler warning
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if( NULL != reqs ) ompi_coll_base_free_reqs(reqs, rsize+1);
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}
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if (NULL != tmpbuf_free) {
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free(tmpbuf_free);
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}
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return err;
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}
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