6b22641669
I know it does not make much sense but one can play around with the performance. Numbers are available at http://www.unixer.de/research/nbcoll/perf/. This is the first step towards collv2. Next step includes the addition of non-blocking functions to the MPI-Layer and the collv1 interface. It implements all MPI-1 collective algorithms in a non-blocking manner. However, the collv1 interface does not allow non-blocking collectives so that all collectives are used blocking by the ompi-glue layer. I wanted to add LibNBC as a separate subdirectory, but I could not convince the buildsystem (and had not the time). So the component looks pretty messy. It would be great if somebody could explain me how to move all nbc*{c,h}, and {hb,dict}*{c,h} to a seperate subdirectory. It's .ompi_ignored because I did not test it exhaustively yet. This commit was SVN r11401.
753 строки
30 KiB
C
753 строки
30 KiB
C
#include "nbc.h"
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/* only used in this file */
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static __inline__ int NBC_Start_round(NBC_Handle *handle);
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#ifndef OMPI_COMPONENT
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/* the keyval (global) */
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static int gkeyval=MPI_KEYVAL_INVALID;
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#endif
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#ifndef OMPI_COMPONENT
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static int NBC_Key_copy(MPI_Comm oldcomm, int keyval, void *extra_state, void *attribute_val_in, void *attribute_val_out, int *flag) {
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/* delete the attribute in the new comm - it will be created at the
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* first usage */
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*flag = 0;
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return MPI_SUCCESS;
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}
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static int NBC_Key_delete(MPI_Comm comm, int keyval, void *attribute_val, void *extra_state) {
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NBC_Comminfo *comminfo;
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if(keyval == gkeyval) {
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comminfo=(NBC_Comminfo*)attribute_val;
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free(comminfo);
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} else {
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printf("Got wrong keyval!(%i)\n", keyval);
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}
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return MPI_SUCCESS;
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}
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#endif
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/* allocates a new schedule array */
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int NBC_Sched_create(NBC_Schedule* schedule) {
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*schedule=malloc(2*sizeof(int));
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if(*schedule == NULL) { return NBC_OOR; }
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*(int*)*schedule=2*sizeof(int);
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*(((int*)*schedule)+1)=0;
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return NBC_OK;
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}
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/* frees a schedule array */
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int NBC_Free(NBC_Handle* handle) {
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/*free(*handle->schedule);*/
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/* the schedule pointer itself is also malloc'd */
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/*free(handle->schedule);*/
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/* if the nbc_I<collective> attached some data */
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if(NULL != handle->tmpbuf) free(handle->tmpbuf);
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return NBC_OK;
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}
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/* this function puts a send into the schedule */
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int NBC_Sched_send(void* buf, char tmpbuf, int count, MPI_Datatype datatype, int dest, NBC_Schedule *schedule) {
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int size;
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NBC_Args_send* send_args;
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/* get size of actual schedule */
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NBC_GET_SIZE(*schedule, size);
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/*printf("schedule is %i bytes\n", size);*/
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*schedule = realloc(*schedule, size+sizeof(NBC_Args_send)+sizeof(NBC_Fn_type));
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if(*schedule == NULL) { printf("Error in realloc()\n"); return NBC_OOR; }
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/* adjust the function type */
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*(NBC_Fn_type*)((char*)*schedule+size)=SEND;
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/* store the passed arguments */
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send_args = (NBC_Args_send*)((char*)*schedule+size+sizeof(NBC_Fn_type));
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send_args->buf=buf;
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send_args->tmpbuf=tmpbuf;
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send_args->count=count;
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send_args->datatype=datatype;
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send_args->dest=dest;
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/* increase number of elements in schedule */
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NBC_INC_NUM_ROUND(*schedule);
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NBC_DEBUG(10, "adding send - ends at byte %i\n", (int)(size+sizeof(NBC_Args_send)+sizeof(NBC_Fn_type)));
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/* increase size of schedule */
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NBC_INC_SIZE(*schedule, sizeof(NBC_Args_send)+sizeof(NBC_Fn_type));
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return NBC_OK;
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}
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/* this function puts a receive into the schedule */
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int NBC_Sched_recv(void* buf, char tmpbuf, int count, MPI_Datatype datatype, int source, NBC_Schedule *schedule) {
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int size;
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NBC_Args_recv* recv_args;
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/* get size of actual schedule */
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NBC_GET_SIZE(*schedule, size);
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/*printf("schedule is %i bytes\n", size);*/
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*schedule = realloc(*schedule, size+sizeof(NBC_Args_recv)+sizeof(NBC_Fn_type));
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if(*schedule == NULL) { printf("Error in realloc()\n"); return NBC_OOR; }
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/* adjust the function type */
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*(NBC_Fn_type*)((char*)*schedule+size)=RECV;
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/* store the passed arguments */
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recv_args=(NBC_Args_recv*)((char*)*schedule+size+sizeof(NBC_Fn_type));
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recv_args->buf=buf;
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recv_args->tmpbuf=tmpbuf;
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recv_args->count=count;
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recv_args->datatype=datatype;
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recv_args->source=source;
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/* increase number of elements in schedule */
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NBC_INC_NUM_ROUND(*schedule);
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NBC_DEBUG(10, "adding receive - ends at byte %i\n", (int)(size+sizeof(NBC_Args_recv)+sizeof(NBC_Fn_type)));
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/* increase size of schedule */
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NBC_INC_SIZE(*schedule, sizeof(NBC_Args_recv)+sizeof(NBC_Fn_type));
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return NBC_OK;
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}
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/* this function puts an operation into the schedule */
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int NBC_Sched_op(void *buf3, char tmpbuf3, void* buf1, char tmpbuf1, void* buf2, char tmpbuf2, int count, MPI_Datatype datatype, MPI_Op op, NBC_Schedule *schedule) {
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int size;
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NBC_Args_op* op_args;
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/* get size of actual schedule */
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NBC_GET_SIZE(*schedule, size);
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/*printf("schedule is %i bytes\n", size);*/
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*schedule = realloc(*schedule, size+sizeof(NBC_Args_op)+sizeof(NBC_Fn_type));
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if(*schedule == NULL) { printf("Error in realloc()\n"); return NBC_OOR; }
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/* adjust the function type */
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*(NBC_Fn_type*)((char*)*schedule+size)=OP;
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/* store the passed arguments */
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op_args=(NBC_Args_op*)((char*)*schedule+size+sizeof(NBC_Fn_type));
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op_args->buf1=buf1;
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op_args->buf2=buf2;
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op_args->buf3=buf3;
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op_args->tmpbuf1=tmpbuf1;
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op_args->tmpbuf2=tmpbuf2;
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op_args->tmpbuf3=tmpbuf3;
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op_args->count=count;
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op_args->op=op;
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op_args->datatype=datatype;
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/* increase number of elements in schedule */
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NBC_INC_NUM_ROUND(*schedule);
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NBC_DEBUG(10, "adding op - ends at byte %i\n", (int)(size+sizeof(NBC_Args_op)+sizeof(NBC_Fn_type)));
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/* increase size of schedule */
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NBC_INC_SIZE(*schedule, sizeof(NBC_Args_op)+sizeof(NBC_Fn_type));
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return NBC_OK;
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}
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/* this function puts a copy into the schedule */
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int NBC_Sched_copy(void *src, char tmpsrc, int srccount, MPI_Datatype srctype, void *tgt, char tmptgt, int tgtcount, MPI_Datatype tgttype, NBC_Schedule *schedule) {
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int size;
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NBC_Args_copy* copy_args;
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/* get size of actual schedule */
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NBC_GET_SIZE(*schedule, size);
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/*printf("schedule is %i bytes\n", size);*/
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*schedule = realloc(*schedule, size+sizeof(NBC_Args_copy)+sizeof(NBC_Fn_type));
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if(*schedule == NULL) { printf("Error in realloc()\n"); return NBC_OOR; }
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/* adjust the function type */
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*(NBC_Fn_type*)((char*)*schedule+size)=COPY;
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/* store the passed arguments */
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copy_args = (NBC_Args_copy*)((char*)*schedule+size+sizeof(NBC_Fn_type));
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copy_args->src=src;
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copy_args->tmpsrc=tmpsrc;
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copy_args->srccount=srccount;
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copy_args->srctype=srctype;
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copy_args->tgt=tgt;
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copy_args->tmptgt=tmptgt;
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copy_args->tgtcount=tgtcount;
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copy_args->tgttype=tgttype;
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/* increase number of elements in schedule */
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NBC_INC_NUM_ROUND(*schedule);
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NBC_DEBUG(10, "adding copy - ends at byte %i\n", (int)(size+sizeof(NBC_Args_copy)+sizeof(NBC_Fn_type)));
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/* increase size of schedule */
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NBC_INC_SIZE(*schedule, sizeof(NBC_Args_copy)+sizeof(NBC_Fn_type));
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return NBC_OK;
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}
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/* this function puts a unpack into the schedule */
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int NBC_Sched_unpack(void *inbuf, char tmpinbuf, int count, MPI_Datatype datatype, void *outbuf, char tmpoutbuf, NBC_Schedule *schedule) {
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int size;
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NBC_Args_unpack* unpack_args;
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/* get size of actual schedule */
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NBC_GET_SIZE(*schedule, size);
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/*printf("schedule is %i bytes\n", size);*/
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*schedule = realloc(*schedule, size+sizeof(NBC_Args_unpack)+sizeof(NBC_Fn_type));
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if(*schedule == NULL) { printf("Error in realloc()\n"); return NBC_OOR; }
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/* adjust the function type */
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*(NBC_Fn_type*)((char*)*schedule+size)=UNPACK;
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/* store the passed arguments */
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unpack_args = (NBC_Args_unpack*)((char*)*schedule+size+sizeof(NBC_Fn_type));
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unpack_args->inbuf=inbuf;
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unpack_args->tmpinbuf=tmpinbuf;
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unpack_args->count=count;
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unpack_args->datatype=datatype;
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unpack_args->outbuf=outbuf;
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unpack_args->tmpoutbuf=tmpoutbuf;
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/* increase number of elements in schedule */
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NBC_INC_NUM_ROUND(*schedule);
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NBC_DEBUG(10, "adding unpack - ends at byte %i\n", (int)(size+sizeof(NBC_Args_unpack)+sizeof(NBC_Fn_type)));
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/* increase size of schedule */
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NBC_INC_SIZE(*schedule, sizeof(NBC_Args_unpack)+sizeof(NBC_Fn_type));
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return NBC_OK;
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}
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/* this function ends a round of a schedule */
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int NBC_Sched_barrier(NBC_Schedule *schedule) {
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int size;
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/* get size of actual schedule */
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NBC_GET_SIZE(*schedule, size);
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/*printf("round terminated at %i bytes\n", size);*/
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*schedule = realloc(*schedule, size+sizeof(char)+sizeof(int));
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if(*schedule == NULL) { printf("Error in realloc()\n"); return NBC_OOR; }
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/* add the barrier char (1) because another round follows */
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*(char*)((char*)*schedule+size)=1;
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/* set round count elements = 0 for new round */
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*(int*)((char*)*schedule+size+sizeof(char))=0;
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NBC_DEBUG(10, "ending round at byte %i\n", (int)(size+sizeof(char)+sizeof(int)));
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/* increase size of schedule */
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NBC_INC_SIZE(*schedule, sizeof(char)+sizeof(int));
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return NBC_OK;
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}
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/* this function ends a schedule */
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int NBC_Sched_commit(NBC_Schedule *schedule) {
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int size;
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/* get size of actual schedule */
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NBC_GET_SIZE(*schedule, size);
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/*printf("schedule terminated at %i bytes\n", size);*/
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*schedule = realloc(*schedule, size+sizeof(char));
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if(*schedule == NULL) { printf("Error in realloc()\n"); return NBC_OOR; }
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/* add the barrier char (0) because this is the last round */
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*(char*)((char*)*schedule+size)=0;
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NBC_DEBUG(10, "closing schedule %p at byte %i\n", *schedule, (int)(size+sizeof(char)));
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/* increase size of schedule */
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NBC_INC_SIZE(*schedule, sizeof(char));
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return NBC_OK;
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}
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int NBC_Progress(NBC_Handle *handle) {
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int flag, res;
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long size;
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char *delim;
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if((handle->req_count > 0) && (handle->req_array != NULL)) {
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NBC_DEBUG(50, "NBC_Progress: testing for %i requests\n", handle->req_count);
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#ifdef OMPI_COMPONENT
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/*res = ompi_request_test_all(handle->req_count, handle->req_array, &flag, MPI_STATUSES_IGNORE);*/
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res = MPI_Testall(handle->req_count, handle->req_array, &flag, MPI_STATUS_IGNORE);
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if(res != OMPI_SUCCESS) { printf("MPI Error in MPI_Testall() (%i)\n", res); return res; }
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#endif
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#ifdef MPI
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res = MPI_Testall(handle->req_count, handle->req_array, &flag, MPI_STATUS_IGNORE);
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if(res != MPI_SUCCESS) { printf("MPI Error in MPI_Testall() (%i)\n", res); return res; }
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#endif
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#ifdef IB
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res = IB_Testall(handle->req_count, handle->req_array, &flag);
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if(res != MPI_SUCCESS) { printf("MPI Error in MPI_Testall() (%i)\n", res); return res; }
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#endif
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} else {
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flag = 1; /* we had no open requests -> proceed to next round */
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}
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/* a round is finished */
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if(flag) {
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/* adjust delim to start of current round */
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NBC_DEBUG(10, "NBC_Progress: going in schedule %p to row-offset: %li\n", *handle->schedule, handle->row_offset);
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delim = (char*)*handle->schedule + handle->row_offset;
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NBC_DEBUG(10, "delim: %p\n", delim);
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NBC_GET_ROUND_SIZE(delim, size);
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NBC_DEBUG(10, "size: %li\n", size);
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/* adjust delim to end of current round -> delimiter */
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delim = delim + size;
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if(handle->req_array != NULL) {
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/* free request array */
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free(handle->req_array);
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handle->req_array = NULL;
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}
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handle->req_count = 0;
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if(*delim == 0) {
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/* this was the last round - we're done */
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NBC_DEBUG(5, "NBC_Progress last round finished - we're done\n");
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return NBC_OK;
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} else {
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NBC_DEBUG(5, "NBC_Progress round finished - goto next round\n");
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/* move delim to start of next round */
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delim = delim+1;
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/* initializing handle for new virgin round */
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handle->row_offset = (long)delim - (long)*handle->schedule;
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/* kick it off */
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res = NBC_Start_round(handle);
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if(NBC_OK != res) { printf("Error in NBC_Start_round() (%i)\n", res); return res; }
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}
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}
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return NBC_CONTINUE;
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}
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int NBC_Progress_block(NBC_Handle *handle) {
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int res;
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long size;
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char *delim;
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do {
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if((handle->req_count > 0) && (handle->req_array != NULL)) {
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NBC_DEBUG(50, "NBC_Progress_block: waiting for %i requests\n", handle->req_count);
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#ifdef OMPI_COMPONENT
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/*res = ompi_request_wait_all(handle->req_count, handle->req_array, MPI_STATUSES_IGNORE);*/
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res = MPI_Waitall(handle->req_count, handle->req_array, MPI_STATUS_IGNORE);
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if(res != OMPI_SUCCESS) { printf("MPI Error in MPI_Waitall() (%i)\n", res); return res; }
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#endif
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#ifdef MPI
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res = MPI_Waitall(handle->req_count, handle->req_array, MPI_STATUS_IGNORE);
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if(res != MPI_SUCCESS) { printf("MPI Error in MPI_Waitall() (%i)\n", res); return res; }
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#endif
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#ifdef IB
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res = IB_Waitall(handle->req_count, handle->req_array);
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if(res != NBC_OK) { printf("MPI Error in MPI_Waitall() (%i)\n", res); return res; }
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#endif
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}
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/* a round is finished - adjust delim to start of current round */
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NBC_DEBUG(10, "NBC_Progress_block: going in schedule %p to row-offset: %li\n", *handle->schedule, handle->row_offset);
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delim = (char*)*handle->schedule + handle->row_offset;
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NBC_DEBUG(10, "delim: %p\n", delim);
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NBC_GET_ROUND_SIZE(delim, size);
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NBC_DEBUG(10, "size: %li\n", size);
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/* adjust delim to end of current round -> delimiter */
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delim = delim + size;
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if(handle->req_array != NULL) {
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/* free request array */
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free(handle->req_array);
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handle->req_array = NULL;
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}
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handle->req_count = 0;
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if(*delim == 0) {
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/* this was the last round - we're done */
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NBC_DEBUG(5, "NBC_Progress_block: last round finished - we're done\n");
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break;
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} else {
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NBC_DEBUG(5, "NBC_Progress_block: round finished - goto next round\n");
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/* move delim to start of next round */
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delim = delim+1;
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/* initializing handle for new virgin round */
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handle->row_offset = (long)delim - (long)*handle->schedule;
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/* kick it off */
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res = NBC_Start_round(handle);
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if(NBC_OK != res) { printf("Error in NBC_Start_round() (%i)\n", res); return res; }
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}
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} while(1);
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return NBC_OK;
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}
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static __inline__ int NBC_Start_round(NBC_Handle *handle) {
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int *numptr; /* number of operations */
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int i, res;
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NBC_Fn_type *typeptr;
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NBC_Args_send *sendargs;
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NBC_Args_recv *recvargs;
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NBC_Args_op *opargs;
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NBC_Args_copy *copyargs;
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NBC_Args_unpack *unpackargs;
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NBC_Schedule myschedule;
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void *buf1, *buf2, *buf3;
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/* get schedule address */
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myschedule = (NBC_Schedule*)((char*)*handle->schedule + handle->row_offset);
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numptr = (int*)myschedule;
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NBC_DEBUG(10, "start_round round at address %p : posting %i operations\n", myschedule, *numptr);
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/* typeptr is increased by sizeof(int) bytes to point to type */
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typeptr = (NBC_Fn_type*)(numptr+1);
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for (i=0; i<*numptr; i++) {
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/* go sizeof op-data forward */
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switch(*typeptr) {
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case SEND:
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NBC_DEBUG(5," SEND (offset %li) ", (long)typeptr-(long)myschedule);
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sendargs = (NBC_Args_send*)(typeptr+1);
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NBC_DEBUG(5,"*buf: %p, count: %i, type: %lu, dest: %i, tag: %i)\n", sendargs->buf, sendargs->count, (unsigned long)sendargs->datatype, sendargs->dest, handle->tag);
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typeptr = (NBC_Fn_type*)(((NBC_Args_send*)typeptr)+1);
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/* get an additional request - TODO: req_count NOT thread safe */
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handle->req_count++;
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/* get buffer */
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if(sendargs->tmpbuf)
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buf1=(char*)handle->tmpbuf+(long)sendargs->buf;
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else
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buf1=sendargs->buf;
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#ifdef OMPI_COMPONENT
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handle->req_array = realloc(handle->req_array, (handle->req_count)*sizeof(ompi_request_t*));
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CHECK_NULL(handle->req_array);
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/*res = MCA_PML_CALL(isend_init(buf1, sendargs->count, sendargs->datatype, sendargs->dest, handle->tag, MCA_PML_BASE_SEND_STANDARD, handle->mycomm, handle->req_array+handle->req_count-1));
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printf("MPI_Isend(%lu, %i, %lu, %i, %i, %lu) (%i)\n", (unsigned long)buf1, sendargs->count, (unsigned long)sendargs->datatype, sendargs->dest, handle->tag, (unsigned long)handle->mycomm, res);*/
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res = MPI_Isend(buf1, sendargs->count, sendargs->datatype, sendargs->dest, handle->tag, handle->mycomm, handle->req_array+handle->req_count-1);
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if(OMPI_SUCCESS != res) { printf("Error in MPI_Isend(%lu, %i, %lu, %i, %i, %lu) (%i)\n", (unsigned long)buf1, sendargs->count, (unsigned long)sendargs->datatype, sendargs->dest, handle->tag, (unsigned long)handle->mycomm, res); return res; }
|
|
#endif
|
|
#ifdef MPI
|
|
handle->req_array = realloc(handle->req_array, (handle->req_count)*sizeof(MPI_Request));
|
|
CHECK_NULL(handle->req_array);
|
|
res = MPI_Isend(buf1, sendargs->count, sendargs->datatype, sendargs->dest, handle->tag, handle->mycomm, handle->req_array+handle->req_count-1);
|
|
if(MPI_SUCCESS != res) { printf("Error in MPI_Isend(%lu, %i, %lu, %i, %i, %lu) (%i)\n", (unsigned long)buf1, sendargs->count, (unsigned long)sendargs->datatype, sendargs->dest, handle->tag, (unsigned long)handle->mycomm, res); return res; }
|
|
#endif
|
|
#ifdef IB
|
|
handle->req_array = realloc(handle->req_array, (handle->req_count)*sizeof(IB_Request));
|
|
CHECK_NULL(handle->req_array);
|
|
res = IB_Isend(buf1, sendargs->count, sendargs->datatype, sendargs->dest, handle->tag, handle->mycomm, handle->req_array+handle->req_count-1);
|
|
if(NBC_OK != res) { printf("Error in IB_Isend() (%i)\n", res); return res; }
|
|
#endif
|
|
break;
|
|
case RECV:
|
|
NBC_DEBUG(5, " RECV (offset %li) ", (long)typeptr-(long)myschedule);
|
|
recvargs = (NBC_Args_recv*)(typeptr+1);
|
|
NBC_DEBUG(5, "*buf: %p, count: %i, type: %lu, source: %i, tag: %i)\n", recvargs->buf, recvargs->count, (unsigned long)recvargs->datatype, recvargs->source, handle->tag);
|
|
typeptr = (NBC_Fn_type*)(((NBC_Args_recv*)typeptr)+1);
|
|
/* get an additional request - TODO: req_count NOT thread safe */
|
|
handle->req_count++;
|
|
/* get buffer */
|
|
if(recvargs->tmpbuf) {
|
|
buf1=(char*)handle->tmpbuf+(long)recvargs->buf;
|
|
} else {
|
|
buf1=recvargs->buf;
|
|
}
|
|
#ifdef OMPI_COMPONENT
|
|
handle->req_array = realloc(handle->req_array, (handle->req_count)*sizeof(ompi_request_t*));
|
|
CHECK_NULL(handle->req_array);
|
|
/*res = MCA_PML_CALL(irecv(buf1, recvargs->count, recvargs->datatype, recvargs->source, handle->tag, handle->mycomm, handle->req_array+handle->req_count-1));
|
|
printf("MPI_Irecv(%lu, %i, %lu, %i, %i, %lu) (%i)\n", (unsigned long)buf1, recvargs->count, (unsigned long)recvargs->datatype, recvargs->source, handle->tag, (unsigned long)handle->mycomm, res); */
|
|
res = MPI_Irecv(buf1, recvargs->count, recvargs->datatype, recvargs->source, handle->tag, handle->mycomm, handle->req_array+handle->req_count-1);
|
|
if(OMPI_SUCCESS != res) { printf("Error in MPI_Irecv(%lu, %i, %lu, %i, %i, %lu) (%i)\n", (unsigned long)buf1, recvargs->count, (unsigned long)recvargs->datatype, recvargs->source, handle->tag, (unsigned long)handle->mycomm, res); return res; }
|
|
#endif
|
|
#ifdef MPI
|
|
handle->req_array = realloc(handle->req_array, (handle->req_count)*sizeof(MPI_Request));
|
|
CHECK_NULL(handle->req_array);
|
|
res = MPI_Irecv(buf1, recvargs->count, recvargs->datatype, recvargs->source, handle->tag, handle->mycomm, handle->req_array+handle->req_count-1);
|
|
if(MPI_SUCCESS != res) { printf("Error in MPI_Irecv(%lu, %i, %lu, %i, %i, %lu) (%i)\n", (unsigned long)buf1, recvargs->count, (unsigned long)recvargs->datatype, recvargs->source, handle->tag, (unsigned long)handle->mycomm, res); return res; }
|
|
#endif
|
|
#ifdef IB
|
|
handle->req_array = realloc(handle->req_array, (handle->req_count)*sizeof(IB_Request));
|
|
CHECK_NULL(handle->req_array);
|
|
res = IB_Irecv(buf1, recvargs->count, recvargs->datatype, recvargs->source, handle->tag, handle->mycomm, handle->req_array+handle->req_count-1);
|
|
if(NBC_OK != res) { printf("Error in MPI_Irecv() (%i)\n", res); return res; }
|
|
#endif
|
|
break;
|
|
case OP:
|
|
NBC_DEBUG(5, " OP (offset %li) ", (long)typeptr-(long)myschedule);
|
|
opargs = (NBC_Args_op*)(typeptr+1);
|
|
NBC_DEBUG(5, "*buf1: %lu, buf2: %lu, count: %i, type: %lu)\n", (unsigned long)opargs->buf1, (unsigned long)opargs->buf2, opargs->count, (unsigned long)opargs->datatype);
|
|
typeptr = (NBC_Fn_type*)((NBC_Args_op*)typeptr+1);
|
|
/* get buffers */
|
|
if(opargs->tmpbuf1)
|
|
buf1=(char*)handle->tmpbuf+(long)opargs->buf1;
|
|
else
|
|
buf1=opargs->buf1;
|
|
if(opargs->tmpbuf2)
|
|
buf2=(char*)handle->tmpbuf+(long)opargs->buf2;
|
|
else
|
|
buf2=opargs->buf2;
|
|
if(opargs->tmpbuf3)
|
|
buf3=(char*)handle->tmpbuf+(long)opargs->buf3;
|
|
else
|
|
buf3=opargs->buf3;
|
|
res = NBC_Operation(buf3, buf1, buf2, opargs->op, opargs->datatype, opargs->count);
|
|
if(res != NBC_OK) { printf("NBC_Operation() failed (code: %i)\n", res); return res; }
|
|
break;
|
|
case COPY:
|
|
NBC_DEBUG(5, " COPY (offset %li) ", (long)typeptr-(long)myschedule);
|
|
copyargs = (NBC_Args_copy*)(typeptr+1);
|
|
NBC_DEBUG(5, "*src: %lu, srccount: %i, srctype: %lu, *tgt: %lu, tgtcount: %i, tgttype: %lu)\n", (unsigned long)copyargs->src, copyargs->srccount, (unsigned long)copyargs->srctype, (unsigned long)copyargs->tgt, copyargs->tgtcount, (unsigned long)copyargs->tgttype);
|
|
typeptr = (NBC_Fn_type*)((NBC_Args_copy*)typeptr+1);
|
|
/* get buffers */
|
|
if(copyargs->tmpsrc)
|
|
buf1=(char*)handle->tmpbuf+(long)copyargs->src;
|
|
else
|
|
buf1=copyargs->src;
|
|
if(copyargs->tmptgt)
|
|
buf2=(char*)handle->tmpbuf+(long)copyargs->tgt;
|
|
else
|
|
buf2=copyargs->tgt;
|
|
res = NBC_Copy(buf1, copyargs->srccount, copyargs->srctype, buf2, copyargs->tgtcount, copyargs->tgttype, handle->mycomm);
|
|
if(res != NBC_OK) { printf("NBC_Copy() failed (code: %i)\n", res); return res; }
|
|
break;
|
|
case UNPACK:
|
|
NBC_DEBUG(5, " UNPACK (offset %li) ", (long)typeptr-(long)myschedule);
|
|
unpackargs = (NBC_Args_unpack*)(typeptr+1);
|
|
NBC_DEBUG(5, "*src: %lu, srccount: %i, srctype: %lu, *tgt: %lu\n", (unsigned long)unpackargs->inbuf, unpackargs->count, (unsigned long)unpackargs->datatype, (unsigned long)unpackargs->outbuf);
|
|
typeptr = (NBC_Fn_type*)((NBC_Args_unpack*)typeptr+1);
|
|
/* get buffers */
|
|
if(unpackargs->tmpinbuf)
|
|
buf1=(char*)handle->tmpbuf+(long)unpackargs->inbuf;
|
|
else
|
|
buf1=unpackargs->outbuf;
|
|
if(unpackargs->tmpoutbuf)
|
|
buf2=(char*)handle->tmpbuf+(long)unpackargs->outbuf;
|
|
else
|
|
buf2=unpackargs->outbuf;
|
|
res = NBC_Unpack(buf1, unpackargs->count, unpackargs->datatype, buf2, handle->mycomm);
|
|
if(res != NBC_OK) { printf("NBC_Unpack() failed (code: %i)\n", res); return res; }
|
|
break;
|
|
default:
|
|
printf("NBC_Start_round: bad type %li at offset %li\n", (long)*typeptr, (long)typeptr-(long)myschedule);
|
|
return NBC_BAD_SCHED;
|
|
}
|
|
/* increase ptr by size of fn_type enum */
|
|
typeptr = (NBC_Fn_type*)((NBC_Fn_type*)typeptr+1);
|
|
}
|
|
|
|
/* check if we can make progress - not in the first round, this allows us to leave the
|
|
* initialization faster and to reach more overlap */
|
|
if(handle->row_offset != 4) {
|
|
res = NBC_Progress(handle);
|
|
if((NBC_OK != res) && (NBC_CONTINUE != res)) { printf("Error in NBC_Progress() (%i)\n", res); return res; }
|
|
}
|
|
|
|
return NBC_OK;
|
|
}
|
|
|
|
__inline__ int NBC_Init_handle(NBC_Handle *handle, MPI_Comm comm) {
|
|
int res, flag;
|
|
NBC_Comminfo *comminfo;
|
|
|
|
/* create a new state and return handle to it */
|
|
handle->req_array = NULL;
|
|
handle->req_count = 0;
|
|
handle->comm = comm;
|
|
/* first int is the schedule size */
|
|
handle->row_offset = sizeof(int);
|
|
|
|
/******************** Do the tag and shadow comm administration ... ***************/
|
|
|
|
#ifdef OMPI_COMPONENT
|
|
/* the communicator is an ompi_communicator_t with a pointer to
|
|
* c_coll_selected_data where we have our comminfo struct - this was
|
|
* initialized during comm_query */
|
|
{
|
|
ompi_communicator_t *ompicomm;
|
|
|
|
ompicomm = (ompi_communicator_t*)comm;
|
|
comminfo = (NBC_Comminfo*)ompicomm->c_coll_selected_data;
|
|
flag = 1;
|
|
}
|
|
#else
|
|
/* otherwise we have to do the normal attribute stuff :-( */
|
|
/* keyval is not initialized yet, we have to init it */
|
|
if(MPI_KEYVAL_INVALID == gkeyval) {
|
|
res = MPI_Keyval_create(NBC_Key_copy, NBC_Key_delete, &(gkeyval), NULL);
|
|
if((MPI_SUCCESS != res)) { printf("Error in MPI_Keyval_create() (%i)\n", res); return res; }
|
|
}
|
|
|
|
res = MPI_Attr_get(comm, gkeyval, &comminfo, &flag);
|
|
if((MPI_SUCCESS != res)) { printf("Error in MPI_Attr_get() (%i)\n", res); return res; }
|
|
#endif
|
|
if (flag) {
|
|
/* we found it */
|
|
comminfo->tag++;
|
|
} else {
|
|
/* we have to create a new one */
|
|
comminfo = NBC_Init_comm(comm);
|
|
if(comminfo == NULL) { printf("Error in NBC_Init_comm() %i\n", res); return NBC_OOR; }
|
|
}
|
|
handle->tag=comminfo->tag;
|
|
handle->mycomm=comminfo->mycomm;
|
|
/*printf("got comminfo: %lu tag: %i\n", comminfo, comminfo->tag);*/
|
|
|
|
#if 0
|
|
/*#ifdef OMPI_COMPONENT*/
|
|
/* we use negative tags for OMPI */
|
|
if(handle->tag == -50) {
|
|
handle->tag=-32767;
|
|
comminfo->tag=-32767;
|
|
NBC_DEBUG(2,"resetting tags ...\n");
|
|
}
|
|
#else
|
|
#endif
|
|
/* reset counter ... */
|
|
if(handle->tag == 32767) {
|
|
handle->tag=1;
|
|
comminfo->tag=1;
|
|
NBC_DEBUG(2,"resetting tags ...\n");
|
|
}
|
|
/*#endif*/
|
|
|
|
/******************** end of tag and shadow comm administration ... ***************/
|
|
handle->comminfo = comminfo;
|
|
|
|
NBC_DEBUG(3, "got tag %i\n", handle->tag);
|
|
|
|
return NBC_OK;
|
|
}
|
|
|
|
__inline__ NBC_Comminfo* NBC_Init_comm(MPI_Comm comm) {
|
|
#ifndef OMPI_COMPONENT
|
|
int res;
|
|
#endif
|
|
NBC_Comminfo *comminfo;
|
|
|
|
comminfo = malloc(sizeof(NBC_Comminfo));
|
|
if(comminfo == NULL) { printf("Error in malloc()\n"); return NULL; }
|
|
|
|
|
|
#ifdef OMPI_COMPONENT
|
|
comminfo->mycomm = comm;
|
|
/* set tag to 1 */
|
|
/*comminfo->tag=-32767;*/
|
|
comminfo->tag=1;
|
|
#else
|
|
/* set tag to 1 */
|
|
comminfo->tag=1;
|
|
/* dup and save shadow communicator */
|
|
res = MPI_Comm_dup(comm, &(comminfo->mycomm));
|
|
if((MPI_SUCCESS != res)) { printf("Error in MPI_Comm_dup() (%i)\n", res); return NULL; }
|
|
NBC_DEBUG(1, "created a shadow communicator for %lu ... %lu\n", (unsigned long)comm, (unsigned long)comminfo->mycomm);
|
|
#endif
|
|
|
|
#ifdef NBC_CACHE_SCHEDULE
|
|
/* initialize the NBC_ALLTOALL SchedCache tree */
|
|
comminfo->NBC_Dict[NBC_ALLTOALL] = hb_tree_new((dict_cmp_func)NBC_Alltoall_args_compare, NBC_SchedCache_args_delete_key_dummy, NBC_SchedCache_args_delete);
|
|
if(comminfo->NBC_Dict[NBC_ALLTOALL] == NULL) { printf("Error in hb_tree_new()\n"); return NULL; }
|
|
NBC_DEBUG(1, "added tree at address %lu\n", (unsigned long)comminfo->NBC_Dict[NBC_ALLTOALL]);
|
|
comminfo->NBC_Dict_size[NBC_ALLTOALL] = 0;
|
|
/* initialize the NBC_ALLGATHER SchedCache tree */
|
|
comminfo->NBC_Dict[NBC_ALLGATHER] = hb_tree_new((dict_cmp_func)NBC_Allgather_args_compare, NBC_SchedCache_args_delete_key_dummy, NBC_SchedCache_args_delete);
|
|
if(comminfo->NBC_Dict[NBC_ALLGATHER] == NULL) { printf("Error in hb_tree_new()\n"); return NULL; }
|
|
NBC_DEBUG(1, "added tree at address %lu\n", (unsigned long)comminfo->NBC_Dict[NBC_ALLGATHER]);
|
|
comminfo->NBC_Dict_size[NBC_ALLGATHER] = 0;
|
|
/* initialize the NBC_ALLREDUCE SchedCache tree */
|
|
comminfo->NBC_Dict[NBC_ALLREDUCE] = hb_tree_new((dict_cmp_func)NBC_Allreduce_args_compare, NBC_SchedCache_args_delete_key_dummy, NBC_SchedCache_args_delete);
|
|
if(comminfo->NBC_Dict[NBC_ALLREDUCE] == NULL) { printf("Error in hb_tree_new()\n"); return NULL; }
|
|
NBC_DEBUG(1, "added tree at address %lu\n", (unsigned long)comminfo->NBC_Dict[NBC_ALLREDUCE]);
|
|
comminfo->NBC_Dict_size[NBC_ALLREDUCE] = 0;
|
|
/* initialize the NBC_BARRIER SchedCache tree - is not needed -
|
|
* schedule is hung off directly */
|
|
comminfo->NBC_Dict_size[NBC_BARRIER] = 0;
|
|
/* initialize the NBC_BCAST SchedCache tree */
|
|
comminfo->NBC_Dict[NBC_BCAST] = hb_tree_new((dict_cmp_func)NBC_Bcast_args_compare, NBC_SchedCache_args_delete_key_dummy, NBC_SchedCache_args_delete);
|
|
if(comminfo->NBC_Dict[NBC_BCAST] == NULL) { printf("Error in hb_tree_new()\n"); return NULL; }
|
|
NBC_DEBUG(1, "added tree at address %lu\n", (unsigned long)comminfo->NBC_Dict[NBC_BCAST]);
|
|
comminfo->NBC_Dict_size[NBC_BCAST] = 0;
|
|
/* initialize the NBC_GATHER SchedCache tree */
|
|
comminfo->NBC_Dict[NBC_GATHER] = hb_tree_new((dict_cmp_func)NBC_Gather_args_compare, NBC_SchedCache_args_delete_key_dummy, NBC_SchedCache_args_delete);
|
|
if(comminfo->NBC_Dict[NBC_GATHER] == NULL) { printf("Error in hb_tree_new()\n"); return NULL; }
|
|
NBC_DEBUG(1, "added tree at address %lu\n", (unsigned long)comminfo->NBC_Dict[NBC_GATHER]);
|
|
comminfo->NBC_Dict_size[NBC_GATHER] = 0;
|
|
/* initialize the NBC_REDUCE SchedCache tree */
|
|
comminfo->NBC_Dict[NBC_REDUCE] = hb_tree_new((dict_cmp_func)NBC_Reduce_args_compare, NBC_SchedCache_args_delete_key_dummy, NBC_SchedCache_args_delete);
|
|
if(comminfo->NBC_Dict[NBC_REDUCE] == NULL) { printf("Error in hb_tree_new()\n"); return NULL; }
|
|
NBC_DEBUG(1, "added tree at address %lu\n", (unsigned long)comminfo->NBC_Dict[NBC_REDUCE]);
|
|
comminfo->NBC_Dict_size[NBC_REDUCE] = 0;
|
|
/* initialize the NBC_SCAN SchedCache tree */
|
|
comminfo->NBC_Dict[NBC_SCAN] = hb_tree_new((dict_cmp_func)NBC_Scan_args_compare, NBC_SchedCache_args_delete_key_dummy, NBC_SchedCache_args_delete);
|
|
if(comminfo->NBC_Dict[NBC_SCAN] == NULL) { printf("Error in hb_tree_new()\n"); return NULL; }
|
|
NBC_DEBUG(1, "added tree at address %lu\n", (unsigned long)comminfo->NBC_Dict[NBC_SCAN]);
|
|
comminfo->NBC_Dict_size[NBC_SCAN] = 0;
|
|
/* initialize the NBC_SCATTER SchedCache tree */
|
|
comminfo->NBC_Dict[NBC_SCATTER] = hb_tree_new((dict_cmp_func)NBC_Scatter_args_compare, NBC_SchedCache_args_delete_key_dummy, NBC_SchedCache_args_delete);
|
|
if(comminfo->NBC_Dict[NBC_SCATTER] == NULL) { printf("Error in hb_tree_new()\n"); return NULL; }
|
|
NBC_DEBUG(1, "added tree at address %lu\n", (unsigned long)comminfo->NBC_Dict[NBC_SCATTER]);
|
|
comminfo->NBC_Dict_size[NBC_SCATTER] = 0;
|
|
#endif
|
|
|
|
#ifndef OMPI_COMPONENT
|
|
/* put the new attribute to the comm */
|
|
res = MPI_Attr_put(comm, gkeyval, comminfo);
|
|
if((MPI_SUCCESS != res)) { printf("Error in MPI_Attr_put() (%i)\n", res); return NULL; }
|
|
#endif
|
|
|
|
return comminfo;
|
|
}
|
|
|
|
__inline__ int NBC_Start(NBC_Handle *handle, NBC_Schedule *schedule) {
|
|
int res;
|
|
|
|
handle->schedule = schedule;
|
|
/* kick off first round */
|
|
res = NBC_Start_round(handle);
|
|
if((NBC_OK != res)) { printf("Error in NBC_Start_round() (%i)\n", res); return res; }
|
|
|
|
return NBC_OK;
|
|
}
|
|
|
|
int NBC_Wait_poll(NBC_Handle *handle) {
|
|
int res;
|
|
|
|
while(NBC_OK != NBC_Progress(handle));
|
|
|
|
res = NBC_Free(handle);
|
|
if((NBC_OK != res)) { printf("Error in NBC_Free() (%i)\n", res); return res; }
|
|
|
|
return NBC_OK;
|
|
}
|
|
|
|
int NBC_Wait(NBC_Handle *handle) {
|
|
int res;
|
|
|
|
NBC_Progress_block(handle);
|
|
|
|
res = NBC_Free(handle);
|
|
if((NBC_OK != res)) { printf("Error in NBC_Free() (%i)\n", res); return res; }
|
|
|
|
return NBC_OK;
|
|
}
|
|
|
|
#ifdef NBC_CACHE_SCHEDULE
|
|
void NBC_SchedCache_args_delete_key_dummy(void *k) {
|
|
/* do nothing because the key and the data element are identical :-)
|
|
* both (the single one :) is freed in NBC_<COLLOP>_args_delete() */
|
|
}
|
|
|
|
|
|
void NBC_SchedCache_args_delete(void *entry) {
|
|
struct NBC_dummyarg *tmp;
|
|
|
|
tmp = (struct NBC_dummyarg*)entry;
|
|
/* free taglistentry */
|
|
free(*(tmp->schedule));
|
|
/* the schedule pointer itself is also malloc'd */
|
|
free(tmp->schedule);
|
|
free(tmp);
|
|
}
|
|
#endif
|