7bedf62dd8
The algorithms are intended for MPI-3.0 compliance and are not optimized. We should aim to add better algorithms in the future through cheetah. MPI_Iallreduce and MPI_Igatherv on intercommunicators are required for MPI_Comm_idup support. cmr=v1.7.4:reviewer=brbarret:ticket=trac:2715 This commit was SVN r29333. The following Trac tickets were found above: Ticket 2715 --> https://svn.open-mpi.org/trac/ompi/ticket/2715
163 строки
6.7 KiB
C
163 строки
6.7 KiB
C
/* -*- Mode: C; c-basic-offset:4 ; indent-tabs-mode:nil -*- */
|
|
/*
|
|
* Copyright (c) 2006 The Trustees of Indiana University and Indiana
|
|
* University Research and Technology
|
|
* Corporation. All rights reserved.
|
|
* Copyright (c) 2006 The Technical University of Chemnitz. All
|
|
* rights reserved.
|
|
* Copyright (c) 2013 Los Alamos National Security, LLC. All rights
|
|
* reserved.
|
|
*
|
|
* Author(s): Torsten Hoefler <htor@cs.indiana.edu>
|
|
*
|
|
*/
|
|
#include "nbc_internal.h"
|
|
|
|
#ifdef NBC_CACHE_SCHEDULE
|
|
/* tree comparison function for schedule cache */
|
|
int NBC_Scan_args_compare(NBC_Scan_args *a, NBC_Scan_args *b, void *param) {
|
|
|
|
if( (a->sendbuf == b->sendbuf) &&
|
|
(a->recvbuf == b->recvbuf) &&
|
|
(a->count == b->count) &&
|
|
(a->datatype == b->datatype) &&
|
|
(a->op == b->op) ) {
|
|
return 0;
|
|
}
|
|
if( a->sendbuf < b->sendbuf ) {
|
|
return -1;
|
|
}
|
|
return +1;
|
|
}
|
|
#endif
|
|
|
|
/* linear iexscan
|
|
* working principle:
|
|
* 1. each node (but node 0) receives from left neigbor
|
|
* 2. performs op
|
|
* 3. all but rank p-1 do sends to it's right neigbor and exits
|
|
*
|
|
*/
|
|
int ompi_coll_libnbc_iexscan(void* sendbuf, void* recvbuf, int count, MPI_Datatype datatype, MPI_Op op,
|
|
struct ompi_communicator_t *comm, ompi_request_t ** request,
|
|
struct mca_coll_base_module_2_0_0_t *module) {
|
|
int rank, p, res;
|
|
MPI_Aint ext;
|
|
NBC_Schedule *schedule;
|
|
#ifdef NBC_CACHE_SCHEDULE
|
|
NBC_Scan_args *args, *found, search;
|
|
#endif
|
|
char inplace;
|
|
NBC_Handle *handle;
|
|
ompi_coll_libnbc_request_t **coll_req = (ompi_coll_libnbc_request_t**) request;
|
|
ompi_coll_libnbc_module_t *libnbc_module = (ompi_coll_libnbc_module_t*) module;
|
|
|
|
NBC_IN_PLACE(sendbuf, recvbuf, inplace);
|
|
|
|
res = NBC_Init_handle(comm, coll_req, libnbc_module);
|
|
if (res != NBC_OK) { printf("Error in NBC_Init_handle(%i)\n", res); return res; }
|
|
|
|
handle = (*coll_req);
|
|
|
|
res = MPI_Comm_rank(comm, &rank);
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_rank() (%i)\n", res); return res; }
|
|
res = MPI_Comm_size(comm, &p);
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_size() (%i)\n", res); return res; }
|
|
res = MPI_Type_extent(datatype, &ext);
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Type_extent() (%i)\n", res); return res; }
|
|
|
|
if (inplace && rank < p - 1)
|
|
/* need more buffer space for the inplace case */
|
|
handle->tmpbuf = malloc(ext * count * 2);
|
|
else
|
|
handle->tmpbuf = malloc(ext * count);
|
|
|
|
if (handle->tmpbuf == NULL) { printf("Error in malloc()\n"); return NBC_OOR; }
|
|
|
|
#ifdef NBC_CACHE_SCHEDULE
|
|
fprintf (stderr, "NBC_CACHE_SCHEDULE\n");
|
|
/* search schedule in communicator specific tree */
|
|
search.sendbuf=sendbuf;
|
|
search.recvbuf=recvbuf;
|
|
search.count=count;
|
|
search.datatype=datatype;
|
|
search.op=op;
|
|
found = (NBC_Scan_args*)hb_tree_search((hb_tree*)handle->comminfo->NBC_Dict[NBC_EXSCAN], &search);
|
|
if (found == NULL) {
|
|
#endif
|
|
schedule = (NBC_Schedule*)malloc(sizeof(NBC_Schedule));
|
|
if (NULL == schedule) { printf("Error in malloc()\n"); return res; }
|
|
|
|
res = NBC_Sched_create(schedule);
|
|
if (res != NBC_OK) { printf("Error in NBC_Sched_create (%i)\n", res); return res; }
|
|
|
|
if (rank != 0) {
|
|
if (inplace && rank < p - 1)
|
|
/* if sendbuf == recvbuf do not clobber the send buffer until it has been combined
|
|
* with the incoming data. */
|
|
res = NBC_Sched_recv((void *)(ext * count), true, count, datatype, rank-1, schedule);
|
|
else
|
|
res = NBC_Sched_recv(recvbuf, false, count, datatype, rank-1, schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_recv() (%i)\n", res); return res; }
|
|
|
|
if (rank < p - 1) {
|
|
/* we have to wait until we have the data */
|
|
res = NBC_Sched_barrier(schedule);
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_barrier() (%i)\n", res); return res; }
|
|
|
|
/* perform the reduce in my temporary buffer */
|
|
if (inplace)
|
|
res = NBC_Sched_op(0, true, sendbuf, false, (void *)(ext * count), true, count, datatype, op, schedule);
|
|
else
|
|
res = NBC_Sched_op(0, true, sendbuf, false, recvbuf, false, count, datatype, op, schedule);
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_op() (%i)\n", res); return res; }
|
|
|
|
/* this cannot be done until handle->tmpbuf is unused :-( */
|
|
res = NBC_Sched_barrier(schedule);
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_barrier() (%i)\n", res); return res; }
|
|
|
|
/* send reduced data onward */
|
|
res = NBC_Sched_send(0, true, count, datatype, rank + 1, schedule);
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_send() (%i)\n", res); return res; }
|
|
|
|
if (inplace)
|
|
/* copy the received data into the receive buffer */
|
|
NBC_Sched_copy ((void *)(ext * count), true, count, datatype, recvbuf, false, count, datatype, schedule);
|
|
}
|
|
} else if (p > 1) {
|
|
res = NBC_Sched_send(sendbuf, false, count, datatype, 1, schedule);
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_send() (%i)\n", res); return res; }
|
|
}
|
|
|
|
res = NBC_Sched_commit(schedule);
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_commit() (%i)\n", res); return res; }
|
|
|
|
#ifdef NBC_CACHE_SCHEDULE
|
|
/* save schedule to tree */
|
|
args = (NBC_Scan_args*)malloc(sizeof(NBC_Alltoall_args));
|
|
args->sendbuf=sendbuf;
|
|
args->recvbuf=recvbuf;
|
|
args->count=count;
|
|
args->datatype=datatype;
|
|
args->op=op;
|
|
args->schedule=schedule;
|
|
res = hb_tree_insert ((hb_tree*)handle->comminfo->NBC_Dict[NBC_EXSCAN], args, args, 0);
|
|
if(res != 0) printf("error in dict_insert() (%i)\n", res);
|
|
/* increase number of elements for A2A */
|
|
if(++handle->comminfo->NBC_Dict_size[NBC_EXSCAN] > NBC_SCHED_DICT_UPPER) {
|
|
NBC_SchedCache_dictwipe((hb_tree*)handle->comminfo->NBC_Dict[NBC_EXSCAN], &handle->comminfo->NBC_Dict_size[NBC_EXSCAN]);
|
|
}
|
|
} else {
|
|
/* found schedule */
|
|
schedule=found->schedule;
|
|
}
|
|
#endif
|
|
|
|
res = NBC_Start(handle, schedule);
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Start() (%i)\n", res); return res; }
|
|
|
|
/* tmpbuf is freed with the handle */
|
|
return NBC_OK;
|
|
}
|