e12ca48cd9
http://www.open-mpi.org/community/lists/devel/2010/07/8240.php Documentation: http://osl.iu.edu/research/ft/ Major Changes: -------------- * Added C/R-enabled Debugging support. Enabled with the --enable-crdebug flag. See the following website for more information: http://osl.iu.edu/research/ft/crdebug/ * Added Stable Storage (SStore) framework for checkpoint storage * 'central' component does a direct to central storage save * 'stage' component stages checkpoints to central storage while the application continues execution. * 'stage' supports offline compression of checkpoints before moving (sstore_stage_compress) * 'stage' supports local caching of checkpoints to improve automatic recovery (sstore_stage_caching) * Added Compression (compress) framework to support * Add two new ErrMgr recovery policies * {{{crmig}}} C/R Process Migration * {{{autor}}} C/R Automatic Recovery * Added the {{{ompi-migrate}}} command line tool to support the {{{crmig}}} ErrMgr component * Added CR MPI Ext functions (enable them with {{{--enable-mpi-ext=cr}}} configure option) * {{{OMPI_CR_Checkpoint}}} (Fixes trac:2342) * {{{OMPI_CR_Restart}}} * {{{OMPI_CR_Migrate}}} (may need some more work for mapping rules) * {{{OMPI_CR_INC_register_callback}}} (Fixes trac:2192) * {{{OMPI_CR_Quiesce_start}}} * {{{OMPI_CR_Quiesce_checkpoint}}} * {{{OMPI_CR_Quiesce_end}}} * {{{OMPI_CR_self_register_checkpoint_callback}}} * {{{OMPI_CR_self_register_restart_callback}}} * {{{OMPI_CR_self_register_continue_callback}}} * The ErrMgr predicted_fault() interface has been changed to take an opal_list_t of ErrMgr defined types. This will allow us to better support a wider range of fault prediction services in the future. * Add a progress meter to: * FileM rsh (filem_rsh_process_meter) * SnapC full (snapc_full_progress_meter) * SStore stage (sstore_stage_progress_meter) * Added 2 new command line options to ompi-restart * --showme : Display the full command line that would have been exec'ed. * --mpirun_opts : Command line options to pass directly to mpirun. (Fixes trac:2413) * Deprecated some MCA params: * crs_base_snapshot_dir deprecated, use sstore_stage_local_snapshot_dir * snapc_base_global_snapshot_dir deprecated, use sstore_base_global_snapshot_dir * snapc_base_global_shared deprecated, use sstore_stage_global_is_shared * snapc_base_store_in_place deprecated, replaced with different components of SStore * snapc_base_global_snapshot_ref deprecated, use sstore_base_global_snapshot_ref * snapc_base_establish_global_snapshot_dir deprecated, never well supported * snapc_full_skip_filem deprecated, use sstore_stage_skip_filem Minor Changes: -------------- * Fixes trac:1924 : {{{ompi-restart}}} now recognizes path prefixed checkpoint handles and does the right thing. * Fixes trac:2097 : {{{ompi-info}}} should now report all available CRS components * Fixes trac:2161 : Manual checkpoint movement. A user can 'mv' a checkpoint directory from the original location to another and still restart from it. * Fixes trac:2208 : Honor various TMPDIR varaibles instead of forcing {{{/tmp}}} * Move {{{ompi_cr_continue_like_restart}}} to {{{orte_cr_continue_like_restart}}} to be more flexible in where this should be set. * opal_crs_base_metadata_write* functions have been moved to SStore to support a wider range of metadata handling functionality. * Cleanup the CRS framework and components to work with the SStore framework. * Cleanup the SnapC framework and components to work with the SStore framework (cleans up these code paths considerably). * Add 'quiesce' hook to CRCP for a future enhancement. * We now require a BLCR version that supports {{{cr_request_file()}}} or {{{cr_request_checkpoint()}}} in order to make the code more maintainable. Note that {{{cr_request_file}}} has been deprecated since 0.7.0, so we prefer to use {{{cr_request_checkpoint()}}}. * Add optional application level INC callbacks (registered through the CR MPI Ext interface). * Increase the {{{opal_cr_thread_sleep_wait}}} parameter to 1000 microseconds to make the C/R thread less aggressive. * {{{opal-restart}}} now looks for cache directories before falling back on stable storage when asked. * {{{opal-restart}}} also support local decompression before restarting * {{{orte-checkpoint}}} now uses the SStore framework to work with the metadata * {{{orte-restart}}} now uses the SStore framework to work with the metadata * Remove the {{{orte-restart}}} preload option. This was removed since the user only needs to select the 'stage' component in order to support this functionality. * Since the '-am' parameter is saved in the metadata, {{{ompi-restart}}} no longer hard codes {{{-am ft-enable-cr}}}. * Fix {{{hnp}}} ErrMgr so that if a previous component in the stack has 'fixed' the problem, then it should be skipped. * Make sure to decrement the number of 'num_local_procs' in the orted when one goes away. * odls now checks the SStore framework to see if it needs to load any checkpoint files before launching (to support 'stage'). This separates the SStore logic from the --preload-[binary|files] options. * Add unique IDs to the named pipes established between the orted and the app in SnapC. This is to better support migration and automatic recovery activities. * Improve the checks for 'already checkpointing' error path. * A a recovery output timer, to show how long it takes to restart a job * Do a better job of cleaning up the old session directory on restart. * Add a local module to the autor and crmig ErrMgr components. These small modules prevent the 'orted' component from attempting a local recovery (Which does not work for MPI apps at the moment) * Add a fix for bounding the checkpointable region between MPI_Init and MPI_Finalize. This commit was SVN r23587. The following Trac tickets were found above: Ticket 1924 --> https://svn.open-mpi.org/trac/ompi/ticket/1924 Ticket 2097 --> https://svn.open-mpi.org/trac/ompi/ticket/2097 Ticket 2161 --> https://svn.open-mpi.org/trac/ompi/ticket/2161 Ticket 2192 --> https://svn.open-mpi.org/trac/ompi/ticket/2192 Ticket 2208 --> https://svn.open-mpi.org/trac/ompi/ticket/2208 Ticket 2342 --> https://svn.open-mpi.org/trac/ompi/ticket/2342 Ticket 2413 --> https://svn.open-mpi.org/trac/ompi/ticket/2413
478 строки
12 KiB
C
478 строки
12 KiB
C
/*
|
|
* Copyright (c) 2004-2010 The Trustees of Indiana University.
|
|
* All rights reserved.
|
|
* Copyright (c) 2004-2005 The Trustees of the University of Tennessee.
|
|
* All rights reserved.
|
|
* Copyright (c) 2004-2005 High Performance Computing Center Stuttgart,
|
|
* University of Stuttgart. All rights reserved.
|
|
* Copyright (c) 2004-2005 The Regents of the University of California.
|
|
* All rights reserved.
|
|
* Copyright (c) 2007 Evergrid, Inc. All rights reserved.
|
|
*
|
|
* $COPYRIGHT$
|
|
*
|
|
* Additional copyrights may follow
|
|
*
|
|
* $HEADER$
|
|
*/
|
|
|
|
#include "opal_config.h"
|
|
|
|
#ifdef HAVE_STRING_H
|
|
#include <string.h>
|
|
#endif
|
|
#ifdef HAVE_SYS_TYPES_H
|
|
#include <sys/types.h>
|
|
#endif
|
|
#ifdef HAVE_UNISTD_H
|
|
#include <unistd.h>
|
|
#endif
|
|
#ifdef HAVE_FCNTL_H
|
|
#include <fcntl.h>
|
|
#endif /* HAVE_FCNTL_H */
|
|
#ifdef HAVE_SYS_STAT_H
|
|
#include <sys/stat.h>
|
|
#endif
|
|
|
|
#include "opal/mca/mca.h"
|
|
#include "opal/mca/base/base.h"
|
|
#include "opal/constants.h"
|
|
#include "opal/util/os_dirpath.h"
|
|
#include "opal/util/output.h"
|
|
#include "opal/util/argv.h"
|
|
|
|
#include "opal/mca/crs/crs.h"
|
|
#include "opal/mca/crs/base/base.h"
|
|
|
|
opal_crs_base_self_checkpoint_fn_t crs_base_self_checkpoint_fn;
|
|
opal_crs_base_self_restart_fn_t crs_base_self_restart_fn;
|
|
opal_crs_base_self_continue_fn_t crs_base_self_continue_fn;
|
|
|
|
/******************
|
|
* Local Functions
|
|
******************/
|
|
static int metadata_extract_next_token(FILE *file, char **token, char **value);
|
|
|
|
static char **cleanup_file_argv = NULL;
|
|
static char **cleanup_dir_argv = NULL;
|
|
|
|
/******************
|
|
* Object stuff
|
|
******************/
|
|
static void opal_crs_base_construct(opal_crs_base_snapshot_t *snapshot)
|
|
{
|
|
snapshot->component_name = NULL;
|
|
|
|
snapshot->metadata_filename = NULL;
|
|
snapshot->metadata = NULL;
|
|
snapshot->snapshot_directory = NULL;
|
|
|
|
snapshot->cold_start = false;
|
|
}
|
|
|
|
static void opal_crs_base_destruct( opal_crs_base_snapshot_t *snapshot)
|
|
{
|
|
if(NULL != snapshot->metadata_filename ) {
|
|
free(snapshot->metadata_filename);
|
|
snapshot->metadata_filename = NULL;
|
|
}
|
|
|
|
if(NULL != snapshot->metadata) {
|
|
fclose(snapshot->metadata);
|
|
snapshot->metadata = NULL;
|
|
}
|
|
|
|
if(NULL != snapshot->snapshot_directory ) {
|
|
free(snapshot->snapshot_directory);
|
|
snapshot->snapshot_directory = NULL;
|
|
}
|
|
}
|
|
|
|
OBJ_CLASS_INSTANCE(opal_crs_base_snapshot_t,
|
|
opal_list_item_t,
|
|
opal_crs_base_construct,
|
|
opal_crs_base_destruct);
|
|
|
|
static void opal_crs_base_ckpt_options_construct(opal_crs_base_ckpt_options_t *opts) {
|
|
opal_crs_base_clear_options(opts);
|
|
}
|
|
|
|
static void opal_crs_base_ckpt_options_destruct(opal_crs_base_ckpt_options_t *opts) {
|
|
opal_crs_base_clear_options(opts);
|
|
}
|
|
|
|
OBJ_CLASS_INSTANCE(opal_crs_base_ckpt_options_t,
|
|
opal_object_t,
|
|
opal_crs_base_ckpt_options_construct,
|
|
opal_crs_base_ckpt_options_destruct);
|
|
|
|
/*
|
|
* Utility functions
|
|
*/
|
|
int opal_crs_base_metadata_read_token(FILE *metadata, char * token, char ***value) {
|
|
int exit_status = OPAL_SUCCESS;
|
|
char * loc_token = NULL;
|
|
char * loc_value = NULL;
|
|
int argc = 0;
|
|
|
|
/* Dummy check */
|
|
if( NULL == token ) {
|
|
exit_status = OPAL_ERROR;
|
|
goto cleanup;
|
|
}
|
|
if( NULL == metadata ) {
|
|
exit_status = OPAL_ERROR;
|
|
goto cleanup;
|
|
}
|
|
|
|
/*
|
|
* Extract each token and make the records
|
|
*/
|
|
rewind(metadata);
|
|
do {
|
|
/* Get next token */
|
|
if( OPAL_SUCCESS != metadata_extract_next_token(metadata, &loc_token, &loc_value) ) {
|
|
break;
|
|
}
|
|
|
|
/* Check token to see if it matches */
|
|
if(0 == strncmp(token, loc_token, strlen(loc_token)) ) {
|
|
opal_argv_append(&argc, value, loc_value);
|
|
}
|
|
} while(0 == feof(metadata) );
|
|
|
|
cleanup:
|
|
rewind(metadata);
|
|
return exit_status;
|
|
}
|
|
|
|
int opal_crs_base_extract_expected_component(FILE *metadata, char ** component_name, int *prev_pid)
|
|
{
|
|
int exit_status = OPAL_SUCCESS;
|
|
char **pid_argv = NULL;
|
|
char **name_argv = NULL;
|
|
|
|
/* Dummy check */
|
|
if( NULL == metadata ) {
|
|
exit_status = OPAL_ERROR;
|
|
goto cleanup;
|
|
}
|
|
|
|
opal_crs_base_metadata_read_token(metadata, CRS_METADATA_PID, &pid_argv);
|
|
if( NULL != pid_argv && NULL != pid_argv[0] ) {
|
|
*prev_pid = atoi(pid_argv[0]);
|
|
} else {
|
|
opal_output(0, "Error: expected_component: PID information unavailable!");
|
|
exit_status = OPAL_ERROR;
|
|
goto cleanup;
|
|
}
|
|
|
|
opal_crs_base_metadata_read_token(metadata, CRS_METADATA_COMP, &name_argv);
|
|
if( NULL != name_argv && NULL != name_argv[0] ) {
|
|
*component_name = strdup(name_argv[0]);
|
|
} else {
|
|
opal_output(0, "Error: expected_component: Component Name information unavailable!");
|
|
exit_status = OPAL_ERROR;
|
|
goto cleanup;
|
|
}
|
|
|
|
cleanup:
|
|
if( NULL != pid_argv ) {
|
|
opal_argv_free(pid_argv);
|
|
pid_argv = NULL;
|
|
}
|
|
|
|
if( NULL != name_argv ) {
|
|
opal_argv_free(name_argv);
|
|
name_argv = NULL;
|
|
}
|
|
|
|
return exit_status;
|
|
}
|
|
|
|
int opal_crs_base_cleanup_append(char* filename, bool is_dir)
|
|
{
|
|
if( NULL == filename ) {
|
|
return OPAL_SUCCESS;
|
|
}
|
|
|
|
if( is_dir ) {
|
|
opal_output_verbose(15, opal_crs_base_output,
|
|
"opal:crs: cleanup_append: Append Dir <%s>\n",
|
|
filename);
|
|
opal_argv_append_nosize(&cleanup_dir_argv, filename);
|
|
} else {
|
|
opal_output_verbose(15, opal_crs_base_output,
|
|
"opal:crs: cleanup_append: Append File <%s>\n",
|
|
filename);
|
|
opal_argv_append_nosize(&cleanup_file_argv, filename);
|
|
}
|
|
|
|
return OPAL_SUCCESS;
|
|
}
|
|
|
|
int opal_crs_base_cleanup_flush(void)
|
|
{
|
|
int argc, i;
|
|
|
|
/*
|
|
* Cleanup files first
|
|
*/
|
|
if( NULL != cleanup_file_argv ) {
|
|
argc = opal_argv_count(cleanup_file_argv);
|
|
for( i = 0; i < argc; ++i) {
|
|
opal_output_verbose(15, opal_crs_base_output,
|
|
"opal:crs: cleanup_flush: Remove File <%s>\n", cleanup_file_argv[i]);
|
|
unlink(cleanup_file_argv[i]);
|
|
}
|
|
|
|
opal_argv_free(cleanup_file_argv);
|
|
cleanup_file_argv = NULL;
|
|
}
|
|
|
|
/*
|
|
* Try to cleanup directories next
|
|
*/
|
|
if( NULL != cleanup_dir_argv ) {
|
|
argc = opal_argv_count(cleanup_dir_argv);
|
|
for( i = 0; i < argc; ++i) {
|
|
opal_output_verbose(15, opal_crs_base_output,
|
|
"opal:crs: cleanup_flush: Remove Dir <%s>\n", cleanup_dir_argv[i]);
|
|
opal_os_dirpath_destroy(cleanup_dir_argv[i], true, NULL);
|
|
}
|
|
|
|
opal_argv_free(cleanup_dir_argv);
|
|
cleanup_dir_argv = NULL;
|
|
}
|
|
|
|
return OPAL_SUCCESS;
|
|
}
|
|
|
|
char * opal_crs_base_state_str(opal_crs_state_type_t state)
|
|
{
|
|
char *str = NULL;
|
|
|
|
switch(state) {
|
|
case OPAL_CRS_CHECKPOINT:
|
|
str = strdup("Checkpoint");
|
|
break;
|
|
case OPAL_CRS_RESTART:
|
|
str = strdup("Restart");
|
|
break;
|
|
case OPAL_CRS_CONTINUE:
|
|
str = strdup("Continue");
|
|
break;
|
|
case OPAL_CRS_TERM:
|
|
str = strdup("Terminate");
|
|
break;
|
|
case OPAL_CRS_RUNNING:
|
|
str = strdup("Running");
|
|
break;
|
|
case OPAL_CRS_ERROR:
|
|
str = strdup("Error");
|
|
break;
|
|
default:
|
|
str = strdup("Unknown");
|
|
break;
|
|
}
|
|
|
|
return str;
|
|
}
|
|
|
|
int opal_crs_base_copy_options(opal_crs_base_ckpt_options_t *from,
|
|
opal_crs_base_ckpt_options_t *to)
|
|
{
|
|
if( NULL == from ) {
|
|
opal_output(opal_crs_base_output,
|
|
"opal:crs:base: copy_options: Error: from value is NULL\n");
|
|
return OPAL_ERROR;
|
|
}
|
|
|
|
if( NULL == to ) {
|
|
opal_output(opal_crs_base_output,
|
|
"opal:crs:base: copy_options: Error: to value is NULL\n");
|
|
return OPAL_ERROR;
|
|
}
|
|
|
|
to->term = from->term;
|
|
to->stop = from->stop;
|
|
|
|
to->inc_prep_only = from->inc_prep_only;
|
|
to->inc_recover_only = from->inc_recover_only;
|
|
|
|
#if OPAL_ENABLE_CRDEBUG == 1
|
|
to->attach_debugger = from->attach_debugger;
|
|
to->detach_debugger = from->detach_debugger;
|
|
#endif
|
|
|
|
return OPAL_SUCCESS;
|
|
}
|
|
|
|
int opal_crs_base_clear_options(opal_crs_base_ckpt_options_t *target)
|
|
{
|
|
if( NULL == target ) {
|
|
opal_output(opal_crs_base_output,
|
|
"opal:crs:base: copy_options: Error: target value is NULL\n");
|
|
return OPAL_ERROR;
|
|
}
|
|
|
|
target->term = false;
|
|
target->stop = false;
|
|
|
|
target->inc_prep_only = false;
|
|
target->inc_recover_only = false;
|
|
|
|
#if OPAL_ENABLE_CRDEBUG == 1
|
|
target->attach_debugger = false;
|
|
target->detach_debugger = false;
|
|
#endif
|
|
|
|
return OPAL_SUCCESS;
|
|
}
|
|
|
|
int opal_crs_base_self_register_checkpoint_callback(opal_crs_base_self_checkpoint_fn_t function)
|
|
{
|
|
crs_base_self_checkpoint_fn = function;
|
|
return OPAL_SUCCESS;
|
|
}
|
|
|
|
int opal_crs_base_self_register_restart_callback(opal_crs_base_self_restart_fn_t function)
|
|
{
|
|
crs_base_self_restart_fn = function;
|
|
return OPAL_SUCCESS;
|
|
}
|
|
|
|
int opal_crs_base_self_register_continue_callback(opal_crs_base_self_continue_fn_t function)
|
|
{
|
|
crs_base_self_continue_fn = function;
|
|
return OPAL_SUCCESS;
|
|
}
|
|
|
|
|
|
/******************
|
|
* Local Functions
|
|
******************/
|
|
static int metadata_extract_next_token(FILE *file, char **token, char **value)
|
|
{
|
|
int exit_status = OPAL_SUCCESS;
|
|
int max_len = 256;
|
|
char * line = NULL;
|
|
int line_len = 0;
|
|
int c = 0, s = 0, v = 0;
|
|
char *local_token = NULL;
|
|
char *local_value = NULL;
|
|
bool end_of_line = false;
|
|
|
|
line = (char *) malloc(sizeof(char) * max_len);
|
|
|
|
try_again:
|
|
/*
|
|
* If we are at the end of the file, then just return
|
|
*/
|
|
if(0 != feof(file) ) {
|
|
exit_status = OPAL_ERROR;
|
|
goto cleanup;
|
|
}
|
|
|
|
/*
|
|
* Other wise grab the next token/value pair
|
|
*/
|
|
if (NULL == fgets(line, max_len, file) ) {
|
|
exit_status = OPAL_ERROR;
|
|
goto cleanup;
|
|
}
|
|
line_len = strlen(line);
|
|
/* Strip off the new line if it it there */
|
|
if('\n' == line[line_len-1]) {
|
|
line[line_len-1] = '\0';
|
|
line_len--;
|
|
end_of_line = true;
|
|
}
|
|
else {
|
|
end_of_line = false;
|
|
}
|
|
|
|
/* Ignore lines with just '#' too */
|
|
if(2 >= line_len)
|
|
goto try_again;
|
|
|
|
/*
|
|
* Extract the token from the set
|
|
*/
|
|
for(c = 0;
|
|
line[c] != ':' &&
|
|
c < line_len;
|
|
++c) {
|
|
;
|
|
}
|
|
c += 2; /* For the ' ' and the '\0' */
|
|
local_token = (char *)malloc(sizeof(char) * (c + 1));
|
|
|
|
for(s = 0; s < c; ++s) {
|
|
local_token[s] = line[s];
|
|
}
|
|
|
|
local_token[s] = '\0';
|
|
*token = strdup(local_token);
|
|
|
|
if( NULL != local_token) {
|
|
free(local_token);
|
|
local_token = NULL;
|
|
}
|
|
|
|
/*
|
|
* Extract the value from the set
|
|
*/
|
|
local_value = (char *)malloc(sizeof(char) * (line_len - c + 1));
|
|
for(v = 0, s = c;
|
|
s < line_len;
|
|
++s, ++v) {
|
|
local_value[v] = line[s];
|
|
}
|
|
|
|
while(!end_of_line) {
|
|
if (NULL == fgets(line, max_len, file) ) {
|
|
exit_status = OPAL_ERROR;
|
|
goto cleanup;
|
|
}
|
|
line_len = strlen(line);
|
|
/* Strip off the new line if it it there */
|
|
if('\n' == line[line_len-1]) {
|
|
line[line_len-1] = '\0';
|
|
line_len--;
|
|
end_of_line = true;
|
|
}
|
|
else {
|
|
end_of_line = false;
|
|
}
|
|
|
|
local_value = (char *)realloc(local_value, sizeof(char) * line_len);
|
|
for(s = 0;
|
|
s < line_len;
|
|
++s, ++v) {
|
|
local_value[v] = line[s];
|
|
}
|
|
}
|
|
|
|
local_value[v] = '\0';
|
|
*value = strdup(local_value);
|
|
|
|
cleanup:
|
|
if( NULL != local_token) {
|
|
free(local_token);
|
|
local_token = NULL;
|
|
}
|
|
|
|
if( NULL != local_value) {
|
|
free(local_value);
|
|
local_value = NULL;
|
|
}
|
|
|
|
if( NULL != line) {
|
|
free(line);
|
|
line = NULL;
|
|
}
|
|
|
|
return exit_status;
|
|
}
|