6c5532072a
OMPI and a language agnostic part in OPAL. The convertor is completely moved into OPAL. This offers several benefits as described in RFC http://www.open-mpi.org/community/lists/devel/2009/07/6387.php namely: - Fewer basic types (int* and float* types, boolean and wchar - Fixing naming scheme to ompi-nomenclature. - Usability outside of the ompi-layer. - Due to the fixed nature of simple opal types, their information is completely known at compile time and therefore constified - With fewer datatypes (22), the actual sizes of bit-field types may be reduced from 64 to 32 bits, allowing reorganizing the opal_datatype structure, eliminating holes and keeping data required in convertor (upon send/recv) in one cacheline... This has implications to the convertor-datastructure and other parts of the code. - Several performance tests have been run, the netpipe latency does not change with this patch on Linux/x86-64 on the smoky cluster. - Extensive tests have been done to verify correctness (no new regressions) using: 1. mpi_test_suite on linux/x86-64 using clean ompi-trunk and ompi-ddt: a. running both trunk and ompi-ddt resulted in no differences (except for MPI_SHORT_INT and MPI_TYPE_MIX_LB_UB do now run correctly). b. with --enable-memchecker and running under valgrind (one buglet when run with static found in test-suite, commited) 2. ibm testsuite on linux/x86-64 using clean ompi-trunk and ompi-ddt: all passed (except for the dynamic/ tests failed!! as trunk/MTT) 3. compilation and usage of HDF5 tests on Jaguar using PGI and PathScale compilers. 4. compilation and usage on Scicortex. - Please note, that for the heterogeneous case, (-m32 compiled binaries/ompi), neither ompi-trunk, nor ompi-ddt branch would successfully launch. This commit was SVN r21641.
403 строки
14 KiB
C
403 строки
14 KiB
C
/*
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* Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana
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* University Research and Technology
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* Corporation. All rights reserved.
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* Copyright (c) 2004-2006 The University of Tennessee and The University
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* of Tennessee Research Foundation. All rights
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* reserved.
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* Copyright (c) 2004-2005 High Performance Computing Center Stuttgart,
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* University of Stuttgart. All rights reserved.
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* Copyright (c) 2004-2005 The Regents of the University of California.
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* All rights reserved.
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* $COPYRIGHT$
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*
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* Additional copyrights may follow
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*
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* $HEADER$
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*/
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#include "ompi_config.h"
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#include "mpi.h"
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#include "ompi/constants.h"
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#include "ompi/datatype/ompi_datatype.h"
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#include "ompi/communicator/communicator.h"
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#include "ompi/mca/coll/coll.h"
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#include "ompi/mca/coll/base/coll_tags.h"
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#include "ompi/mca/pml/pml.h"
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#include "coll_tuned.h"
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#include "coll_tuned_topo.h"
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#include "coll_tuned_util.h"
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int
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ompi_coll_tuned_scatter_intra_binomial(void *sbuf, int scount,
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struct ompi_datatype_t *sdtype,
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void *rbuf, int rcount,
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struct ompi_datatype_t *rdtype,
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int root,
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struct ompi_communicator_t *comm,
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mca_coll_base_module_t *module)
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{
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int line = -1;
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int i;
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int rank;
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int vrank;
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int size;
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int total_send = 0;
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char *ptmp = NULL;
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char *tempbuf = NULL;
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int err;
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ompi_coll_tree_t* bmtree;
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MPI_Status status;
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MPI_Aint sextent, slb, strue_lb, strue_extent;
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MPI_Aint rextent, rlb, rtrue_lb, rtrue_extent;
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mca_coll_tuned_module_t *tuned_module = (mca_coll_tuned_module_t*) module;
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mca_coll_tuned_comm_t *data = tuned_module->tuned_data;
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size = ompi_comm_size(comm);
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rank = ompi_comm_rank(comm);
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OPAL_OUTPUT((ompi_coll_tuned_stream,
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"ompi_coll_tuned_scatter_intra_binomial rank %d", rank));
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/* create the binomial tree */
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COLL_TUNED_UPDATE_IN_ORDER_BMTREE( comm, tuned_module, root );
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bmtree = data->cached_in_order_bmtree;
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ompi_datatype_get_extent(sdtype, &slb, &sextent);
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ompi_datatype_get_true_extent(sdtype, &strue_lb, &strue_extent);
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ompi_datatype_get_extent(rdtype, &rlb, &rextent);
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ompi_datatype_get_true_extent(rdtype, &rtrue_lb, &rtrue_extent);
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vrank = (rank - root + size) % size;
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if (rank == root) {
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if (0 == root) {
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/* root on 0, just use the send buffer */
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ptmp = (char *) sbuf;
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if (rbuf != MPI_IN_PLACE) {
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/* local copy to rbuf */
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err = ompi_datatype_sndrcv(sbuf, scount, sdtype,
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rbuf, rcount, rdtype);
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if (MPI_SUCCESS != err) { line = __LINE__; goto err_hndl; }
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}
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} else {
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/* root is not on 0, allocate temp buffer for send */
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tempbuf = (char *) malloc(strue_extent + (scount*size - 1) * sextent);
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if (NULL == tempbuf) {
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err = OMPI_ERR_OUT_OF_RESOURCE; line = __LINE__; goto err_hndl;
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}
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ptmp = tempbuf - slb;
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/* and rotate data so they will eventually in the right place */
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err = ompi_datatype_copy_content_same_ddt(sdtype, scount*(size - root),
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ptmp, (char *) sbuf + sextent*root*scount);
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if (MPI_SUCCESS != err) { line = __LINE__; goto err_hndl; }
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err = ompi_datatype_copy_content_same_ddt(sdtype, scount*root,
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ptmp + sextent*scount*(size - root), (char *) sbuf);
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if (MPI_SUCCESS != err) { line = __LINE__; goto err_hndl; }
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if (rbuf != MPI_IN_PLACE) {
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/* local copy to rbuf */
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err = ompi_datatype_sndrcv(ptmp, scount, sdtype,
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rbuf, rcount, rdtype);
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if (MPI_SUCCESS != err) { line = __LINE__; goto err_hndl; }
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}
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}
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total_send = scount;
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} else if (!(vrank % 2)) {
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/* non-root, non-leaf nodes, allocte temp buffer for recv
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* the most we need is rcount*size/2 */
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tempbuf = (char *) malloc(rtrue_extent + (rcount*size - 1) * rextent);
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if (NULL == tempbuf) {
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err= OMPI_ERR_OUT_OF_RESOURCE; line = __LINE__; goto err_hndl;
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}
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ptmp = tempbuf - rlb;
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sdtype = rdtype;
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scount = rcount;
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sextent = rextent;
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total_send = scount;
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} else {
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/* leaf nodes, just use rbuf */
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ptmp = (char *) rbuf;
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}
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if (!(vrank % 2)) {
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if (rank != root) {
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/* recv from parent on non-root */
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err = MCA_PML_CALL(recv(ptmp, rcount*size, rdtype, bmtree->tree_prev,
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MCA_COLL_BASE_TAG_SCATTER, comm, &status));
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if (MPI_SUCCESS != err) { line = __LINE__; goto err_hndl; }
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/* local copy to rbuf */
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err = ompi_datatype_sndrcv(ptmp, scount, sdtype,
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rbuf, rcount, rdtype);
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if (MPI_SUCCESS != err) { line = __LINE__; goto err_hndl; }
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}
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/* send to children on all non-leaf */
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for (i = 0; i < bmtree->tree_nextsize; i++) {
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int mycount = 0, vkid;
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/* figure out how much data I have to send to this child */
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vkid = (bmtree->tree_next[i] - root + size) % size;
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mycount = vkid - vrank;
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if (mycount > (size - vkid))
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mycount = size - vkid;
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mycount *= scount;
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err = MCA_PML_CALL(send(ptmp + total_send*sextent, mycount, sdtype,
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bmtree->tree_next[i],
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MCA_COLL_BASE_TAG_SCATTER,
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MCA_PML_BASE_SEND_STANDARD, comm));
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if (MPI_SUCCESS != err) { line = __LINE__; goto err_hndl; }
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total_send += mycount;
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}
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if (NULL != tempbuf)
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free(tempbuf);
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} else {
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/* recv from parent on leaf nodes */
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err = MCA_PML_CALL(recv(ptmp, rcount, rdtype, bmtree->tree_prev,
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MCA_COLL_BASE_TAG_SCATTER, comm, &status));
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if (MPI_SUCCESS != err) { line = __LINE__; goto err_hndl; }
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}
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return MPI_SUCCESS;
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err_hndl:
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if (NULL != tempbuf)
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free(tempbuf);
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OPAL_OUTPUT((ompi_coll_tuned_stream, "%s:%4d\tError occurred %d, rank %2d",
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__FILE__, line, err, rank));
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return err;
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}
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/*
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* Linear functions are copied from the BASIC coll module
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* they do not segment the message and are simple implementations
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* but for some small number of nodes and/or small data sizes they
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* are just as fast as tuned/tree based segmenting operations
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* and as such may be selected by the decision functions
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* These are copied into this module due to the way we select modules
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* in V1. i.e. in V2 we will handle this differently and so will not
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* have to duplicate code.
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* JPG following the examples from other coll_tuned implementations. Dec06.
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*/
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/* copied function (with appropriate renaming) starts here */
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/*
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* scatter_intra
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*
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* Function: - basic scatter operation
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* Accepts: - same arguments as MPI_Scatter()
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* Returns: - MPI_SUCCESS or error code
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*/
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int
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ompi_coll_tuned_scatter_intra_basic_linear(void *sbuf, int scount,
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struct ompi_datatype_t *sdtype,
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void *rbuf, int rcount,
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struct ompi_datatype_t *rdtype,
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int root,
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struct ompi_communicator_t *comm,
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mca_coll_base_module_t *module)
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{
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int i, rank, size, err;
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char *ptmp;
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ptrdiff_t lb, incr;
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/* Initialize */
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rank = ompi_comm_rank(comm);
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size = ompi_comm_size(comm);
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/* If not root, receive data. */
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if (rank != root) {
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err = MCA_PML_CALL(recv(rbuf, rcount, rdtype, root,
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MCA_COLL_BASE_TAG_SCATTER,
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comm, MPI_STATUS_IGNORE));
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return err;
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}
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/* I am the root, loop sending data. */
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err = ompi_datatype_get_extent(sdtype, &lb, &incr);
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if (OMPI_SUCCESS != err) {
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return OMPI_ERROR;
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}
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incr *= scount;
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for (i = 0, ptmp = (char *) sbuf; i < size; ++i, ptmp += incr) {
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/* simple optimization */
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if (i == rank) {
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if (MPI_IN_PLACE != rbuf) {
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err =
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ompi_datatype_sndrcv(ptmp, scount, sdtype, rbuf, rcount,
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rdtype);
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}
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} else {
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err = MCA_PML_CALL(send(ptmp, scount, sdtype, i,
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MCA_COLL_BASE_TAG_SCATTER,
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MCA_PML_BASE_SEND_STANDARD, comm));
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}
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if (MPI_SUCCESS != err) {
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return err;
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}
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}
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/* All done */
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return MPI_SUCCESS;
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}
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/* copied function (with appropriate renaming) ends here */
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/* The following are used by dynamic and forced rules */
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/* publish details of each algorithm and if its forced/fixed/locked in */
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/* as you add methods/algorithms you must update this and the query/map
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routines */
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/* this routine is called by the component only */
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/* this makes sure that the mca parameters are set to their initial values
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and perms */
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/* module does not call this they call the forced_getvalues routine instead */
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int
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ompi_coll_tuned_scatter_intra_check_forced_init(coll_tuned_force_algorithm_mca_param_indices_t *mca_param_indices)
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{
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int rc, max_alg = 2, requested_alg;
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ompi_coll_tuned_forced_max_algorithms[SCATTER] = max_alg;
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rc = mca_base_param_reg_int (&mca_coll_tuned_component.super.collm_version,
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"scatter_algorithm_count",
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"Number of scatter algorithms available",
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false, true, max_alg, NULL);
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mca_param_indices->algorithm_param_index
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= mca_base_param_reg_int(&mca_coll_tuned_component.super.collm_version,
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"scatter_algorithm",
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"Which scatter algorithm is used. Can be locked down to choice of: 0 ignore, 1 basic linear, 2 binomial.",
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false, false, 0, NULL);
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if (mca_param_indices->algorithm_param_index < 0) {
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return mca_param_indices->algorithm_param_index;
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}
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mca_base_param_lookup_int(mca_param_indices->algorithm_param_index,
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&(requested_alg));
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if( 0 > requested_alg || requested_alg > max_alg ) {
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if( 0 == ompi_comm_rank( MPI_COMM_WORLD ) ) {
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opal_output( 0, "Scatter algorithm #%d is not available (range [0..%d]). Switching back to ignore(0)\n",
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requested_alg, max_alg );
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}
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mca_base_param_set_int( mca_param_indices->algorithm_param_index, 0);
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}
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mca_param_indices->segsize_param_index
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= mca_base_param_reg_int(&mca_coll_tuned_component.super.collm_version,
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"scatter_algorithm_segmentsize",
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"Segment size in bytes used by default for scatter algorithms. Only has meaning if algorithm is forced and supports segmenting. 0 bytes means no segmentation. Currently, available algorithms do not support segmentation.",
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false, false, 0, NULL);
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mca_param_indices->tree_fanout_param_index
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= mca_base_param_reg_int(&mca_coll_tuned_component.super.collm_version,
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"scatter_algorithm_tree_fanout",
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"Fanout for n-tree used for scatter algorithms. Only has meaning if algorithm is forced and supports n-tree topo based operation. Currently, available algorithms do not support n-tree topologies.",
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false, false,
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ompi_coll_tuned_init_tree_fanout, /* get system wide default */
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NULL);
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mca_param_indices->chain_fanout_param_index
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= mca_base_param_reg_int(&mca_coll_tuned_component.super.collm_version,
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"scatter_algorithm_chain_fanout",
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"Fanout for chains used for scatter algorithms. Only has meaning if algorithm is forced and supports chain topo based operation. Currently, available algorithms do not support chain topologies.",
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false, false,
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ompi_coll_tuned_init_chain_fanout, /* get system wide default */
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NULL);
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return (MPI_SUCCESS);
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}
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int
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ompi_coll_tuned_scatter_intra_do_forced(void *sbuf, int scount,
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struct ompi_datatype_t *sdtype,
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void* rbuf, int rcount,
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struct ompi_datatype_t *rdtype,
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int root,
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struct ompi_communicator_t *comm,
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mca_coll_base_module_t *module)
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{
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mca_coll_tuned_module_t *tuned_module = (mca_coll_tuned_module_t*) module;
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mca_coll_tuned_comm_t *data = tuned_module->tuned_data;
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OPAL_OUTPUT((ompi_coll_tuned_stream,
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"coll:tuned:scatter_intra_do_forced selected algorithm %d",
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data->user_forced[SCATTER].algorithm));
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switch (data->user_forced[SCATTER].algorithm) {
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case (0):
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return ompi_coll_tuned_scatter_intra_dec_fixed (sbuf, scount, sdtype,
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rbuf, rcount, rdtype,
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root, comm, module);
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case (1):
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return ompi_coll_tuned_scatter_intra_basic_linear (sbuf, scount, sdtype,
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rbuf, rcount, rdtype,
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root, comm, module);
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case (2):
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return ompi_coll_tuned_scatter_intra_binomial(sbuf, scount, sdtype,
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rbuf, rcount, rdtype,
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root, comm, module);
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default:
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OPAL_OUTPUT((ompi_coll_tuned_stream,
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"coll:tuned:scatter_intra_do_forced attempt to select algorithm %d when only 0-%d is valid?",
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data->user_forced[SCATTER].algorithm,
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ompi_coll_tuned_forced_max_algorithms[SCATTER]));
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return (MPI_ERR_ARG);
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} /* switch */
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}
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int
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ompi_coll_tuned_scatter_intra_do_this(void *sbuf, int scount,
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struct ompi_datatype_t *sdtype,
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void* rbuf, int rcount,
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struct ompi_datatype_t *rdtype,
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int root,
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struct ompi_communicator_t *comm,
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mca_coll_base_module_t *module,
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int algorithm, int faninout, int segsize)
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{
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OPAL_OUTPUT((ompi_coll_tuned_stream,
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"coll:tuned:scatter_intra_do_this selected algorithm %d topo faninout %d segsize %d",
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algorithm, faninout, segsize));
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switch (algorithm) {
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case (0):
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return ompi_coll_tuned_scatter_intra_dec_fixed (sbuf, scount, sdtype,
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rbuf, rcount, rdtype,
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root, comm, module);
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case (1):
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return ompi_coll_tuned_scatter_intra_basic_linear (sbuf, scount, sdtype,
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rbuf, rcount, rdtype,
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root, comm, module);
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case (2):
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return ompi_coll_tuned_scatter_intra_binomial(sbuf, scount, sdtype,
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rbuf, rcount, rdtype,
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root, comm, module);
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default:
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OPAL_OUTPUT((ompi_coll_tuned_stream,
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"coll:tuned:scatter_intra_do_this attempt to select algorithm %d when only 0-%d is valid?",
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algorithm,
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ompi_coll_tuned_forced_max_algorithms[SCATTER]));
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return (MPI_ERR_ARG);
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} /* switch */
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}
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