c2c6a1b37e
For broadcast send the correct size for all intermediary nodes. This commit was SVN r12552.
548 строки
24 KiB
C
548 строки
24 KiB
C
/*
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* Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana
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* University Research and Technology
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* Corporation. All rights reserved.
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* Copyright (c) 2004-2006 The University of Tennessee and The University
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* of Tennessee Research Foundation. All rights
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* reserved.
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* Copyright (c) 2004-2005 High Performance Computing Center Stuttgart,
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* University of Stuttgart. All rights reserved.
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* Copyright (c) 2004-2005 The Regents of the University of California.
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* All rights reserved.
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* $COPYRIGHT$
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*
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* Additional copyrights may follow
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*
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* $HEADER$
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*/
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#include "ompi_config.h"
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#include "mpi.h"
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#include "ompi/constants.h"
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#include "ompi/datatype/datatype.h"
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#include "ompi/communicator/communicator.h"
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#include "ompi/mca/coll/coll.h"
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#include "ompi/mca/coll/base/coll_tags.h"
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#include "ompi/mca/pml/pml.h"
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#include "ompi/op/op.h"
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#include "coll_tuned.h"
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#include "coll_tuned_topo.h"
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/**
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* This is a generic implementation of the reduce protocol. It used the tree
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* provided as an argument and execute all operations using a segment of
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* count times a datatype.
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* For the last communication it will update the count in order to limit
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* th number of datatype to the original count (original_count)
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*/
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int ompi_coll_tuned_reduce_generic( void* sendbuf, void* recvbuf, int original_count,
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ompi_datatype_t* datatype, ompi_op_t* op,
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int root, ompi_communicator_t* comm,
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ompi_coll_tree_t* tree, int count_by_segment )
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{
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char *inbuf[2] = {(char*)NULL, (char*)NULL};
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char *local_op_buffer, *accumbuf = NULL, *sendtmpbuf;
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ptrdiff_t extent, lower_bound;
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size_t typelng, realsegsize;
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ompi_request_t* reqs[2] = {MPI_REQUEST_NULL, MPI_REQUEST_NULL};
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int num_segments, line, ret, segindex, i, rank;
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int recvcount, prevcount, inbi, previnbi;
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/**
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* Determine number of segments and number of elements
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* sent per operation
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*/
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ompi_ddt_get_extent( datatype, &lower_bound, &extent );
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ompi_ddt_type_size( datatype, &typelng );
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num_segments = (original_count + count_by_segment - 1) / count_by_segment;
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realsegsize = count_by_segment * extent;
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sendtmpbuf = (char*) sendbuf;
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if( sendbuf == MPI_IN_PLACE ) {
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sendtmpbuf = (char *)recvbuf;
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}
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rank = ompi_comm_rank(comm);
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/* non-leaf nodes - wait for children to send me data & forward up (if needed) */
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if( tree->tree_nextsize > 0 ) {
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/* handle non existant recv buffer (i.e. its NULL.. like basic allreduce uses!) */
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accumbuf = (char*)recvbuf;
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if( NULL == accumbuf ) {
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accumbuf = (char*)malloc(realsegsize * num_segments); /* TO BE OPTIMIZED */
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if (accumbuf == NULL) { line = __LINE__; ret = -1; goto error_hndl; }
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}
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/* Allocate two buffers for incoming segments */
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inbuf[0] = (char*) malloc(realsegsize);
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if( inbuf[0] == NULL ) { line = __LINE__; ret = -1; goto error_hndl; }
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/* if there is chance to overlap communication -
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allocate second buffer */
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if( (num_segments > 1) || (tree->tree_nextsize > 1) ) {
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inbuf[1] = (char*) malloc(realsegsize);
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if( inbuf[1] == NULL ) { line = __LINE__; ret = -1; goto error_hndl;}
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} else {
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inbuf[1] = NULL;
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}
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/* reset input buffer index and receive count */
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inbi = 0;
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recvcount = 0;
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/* for each segment */
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for( segindex = 0; segindex <= num_segments; segindex++ ) {
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prevcount = recvcount;
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/* recvcount - number of elements in current segment */
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recvcount = count_by_segment;
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if( segindex == (num_segments-1) )
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recvcount = original_count - count_by_segment * segindex;
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/* for each child */
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for( i = 0; i < tree->tree_nextsize; i++ ) {
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/**
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* We try to overlap communication:
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* either with next segment or with the next child
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*/
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/* post irecv for current segindex on current child */
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if( segindex < num_segments ) {
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void* local_recvbuf = inbuf[inbi];
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if( 0 == i ) {
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/* for the first step (1st child per segment) we might be able to
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* irecv directly into the accumulate buffer so that we can
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* reduce(op) this with our sendbuf in one step as ompi_op_reduce
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* only has two buffer pointers, this avoids an extra memory copy.
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*
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* BUT if we are root and are USING MPI_IN_PLACE this is wrong ek!
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* check for root might not be needed as it should be checked higher up
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*/
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if( !((MPI_IN_PLACE == sendbuf) && (rank == tree->tree_root)) ) {
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local_recvbuf = accumbuf + segindex * realsegsize;
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}
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}
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ret = MCA_PML_CALL(irecv(local_recvbuf, recvcount, datatype, tree->tree_next[i],
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MCA_COLL_BASE_TAG_REDUCE, comm, &reqs[inbi]));
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if (ret != MPI_SUCCESS) { line = __LINE__; goto error_hndl; }
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}
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/* wait for previous req to complete, if any */
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previnbi = (inbi+1) % 2;
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/* wait on data from last child for previous segment */
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ret = ompi_request_wait_all( 1, &reqs[previnbi], MPI_STATUSES_IGNORE );
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if (ret != MPI_SUCCESS) { line = __LINE__; goto error_hndl; }
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local_op_buffer = inbuf[previnbi];
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if( i > 0 ) {
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/* our first operation is to combine our own [sendbuf] data with the data
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* we recvd from down stream (but only if we are not root and not using
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* MPI_IN_PLACE)
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*/
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if( 1 == i ) {
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if( !((MPI_IN_PLACE == sendbuf) && (rank == tree->tree_root)) ) {
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local_op_buffer = sendtmpbuf + segindex * realsegsize;
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}
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}
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/* apply operation */
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ompi_op_reduce(op, local_op_buffer, accumbuf+segindex*realsegsize, recvcount, datatype );
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} else if ( segindex > 0 ) {
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void* accumulator = accumbuf + (segindex-1) * realsegsize;
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if( tree->tree_nextsize <= 1 ) {
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if( !((MPI_IN_PLACE == sendbuf) && (rank == tree->tree_root)) ) {
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local_op_buffer = sendtmpbuf+(segindex-1)*realsegsize;
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}
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}
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ompi_op_reduce(op, local_op_buffer, accumulator, prevcount, datatype );
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/* all reduced on available data this step (i) complete, pass to
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* the next process unless your the root
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*/
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if (rank != tree->tree_root) {
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/* send combined/accumulated data to parent */
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ret = MCA_PML_CALL( send( accumulator, prevcount, datatype,
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tree->tree_prev, MCA_COLL_BASE_TAG_REDUCE,
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MCA_PML_BASE_SEND_STANDARD, comm) );
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if (ret != MPI_SUCCESS) { line = __LINE__; goto error_hndl; }
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}
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/* we stop when segindex = number of segments (i.e. we do num_segment+1 steps to allow for pipelining */
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if (segindex == num_segments) break;
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}
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/* update input buffer index */
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inbi = previnbi;
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} /* end of for each child */
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} /* end of for each segment */
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/* clean up */
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if( inbuf[0] != NULL) free(inbuf[0]);
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if( inbuf[1] != NULL) free(inbuf[1]);
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if( NULL == recvbuf ) free(accumbuf);
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}
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/* leaf nodes */
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else {
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/* Send segmented data to parents */
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segindex = 0;
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while( original_count > 0 ) {
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if( original_count < count_by_segment ) count_by_segment = original_count;
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ret = MCA_PML_CALL( send((char*)sendbuf + segindex * realsegsize, count_by_segment,
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datatype, tree->tree_prev,
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MCA_COLL_BASE_TAG_REDUCE, MCA_PML_BASE_SEND_STANDARD, comm) );
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if (ret != MPI_SUCCESS) { line = __LINE__; goto error_hndl; }
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segindex++;
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original_count -= count_by_segment;
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}
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}
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return OMPI_SUCCESS;
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error_hndl: /* error handler */
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OPAL_OUTPUT (( ompi_coll_tuned_stream, "ERROR_HNDL: node %d file %s line %d error %d\n", rank, __FILE__, line, ret ));
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if( inbuf[0] != NULL ) free(inbuf[0]);
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if( inbuf[1] != NULL ) free(inbuf[1]);
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if( (NULL == recvbuf) && (NULL != accumbuf) ) free(accumbuf);
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return ret;
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}
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/* Attention: this version of the reduce operations does not
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work for:
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- non-commutative operations
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- segment sizes which are not multiplies of the extent of the datatype
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meaning that at least one datatype must fit in the segment !
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*/
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int ompi_coll_tuned_reduce_intra_chain( void *sendbuf, void *recvbuf, int count,
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ompi_datatype_t* datatype, ompi_op_t* op,
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int root, ompi_communicator_t* comm, uint32_t segsize,
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int fanout)
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{
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int segcount = count;
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size_t typelng;
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OPAL_OUTPUT((ompi_coll_tuned_stream,"coll:tuned:reduce_intra_chain rank %d fo %d ss %5d", ompi_comm_rank(comm), fanout, segsize));
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COLL_TUNED_UPDATE_CHAIN( comm, root, fanout );
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/**
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* Determine number of segments and number of elements
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* sent per operation
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*/
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ompi_ddt_type_size( datatype, &typelng );
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COLL_TUNED_COMPUTED_SEGCOUNT( segsize, typelng, segcount );
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return ompi_coll_tuned_reduce_generic( sendbuf, recvbuf, count, datatype, op, root, comm,
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comm->c_coll_selected_data->cached_chain, segcount );
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}
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int ompi_coll_tuned_reduce_intra_pipeline( void *sendbuf, void *recvbuf,
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int count, ompi_datatype_t* datatype,
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ompi_op_t* op, int root,
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ompi_communicator_t* comm, uint32_t segsize )
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{
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int segcount = count;
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size_t typelng;
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OPAL_OUTPUT((ompi_coll_tuned_stream,"coll:tuned:reduce_intra_pipeline rank %d ss %5d",
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ompi_comm_rank(comm), segsize));
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COLL_TUNED_UPDATE_PIPELINE( comm, root );
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/**
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* Determine number of segments and number of elements
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* sent per operation
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*/
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ompi_ddt_type_size( datatype, &typelng );
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COLL_TUNED_COMPUTED_SEGCOUNT( segsize, typelng, segcount );
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return ompi_coll_tuned_reduce_generic( sendbuf, recvbuf, count, datatype, op, root, comm,
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comm->c_coll_selected_data->cached_pipeline, segcount );
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}
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int ompi_coll_tuned_reduce_intra_binary( void *sendbuf, void *recvbuf,
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int count, ompi_datatype_t* datatype,
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ompi_op_t* op, int root,
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ompi_communicator_t* comm, uint32_t segsize )
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{
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int segcount = count;
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size_t typelng;
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OPAL_OUTPUT((ompi_coll_tuned_stream,"coll:tuned:reduce_intra_binary rank %d ss %5d",
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ompi_comm_rank(comm), segsize));
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COLL_TUNED_UPDATE_BINTREE( comm, root );
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/**
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* Determine number of segments and number of elements
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* sent per operation
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*/
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ompi_ddt_type_size( datatype, &typelng );
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COLL_TUNED_COMPUTED_SEGCOUNT( segsize, typelng, segcount );
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return ompi_coll_tuned_reduce_generic( sendbuf, recvbuf, count, datatype, op, root, comm,
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comm->c_coll_selected_data->cached_bintree, segcount );
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}
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int ompi_coll_tuned_reduce_intra_binomial( void *sendbuf, void *recvbuf,
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int count, ompi_datatype_t* datatype,
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ompi_op_t* op, int root,
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ompi_communicator_t* comm, uint32_t segsize )
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{
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int segcount = count;
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size_t typelng;
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OPAL_OUTPUT((ompi_coll_tuned_stream,"coll:tuned:reduce_intra_binomial rank %d ss %5d",
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ompi_comm_rank(comm), segsize));
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COLL_TUNED_UPDATE_BMTREE( comm, root );
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/**
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* Determine number of segments and number of elements
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* sent per operation
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*/
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ompi_ddt_type_size( datatype, &typelng );
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COLL_TUNED_COMPUTED_SEGCOUNT( segsize, typelng, segcount );
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return ompi_coll_tuned_reduce_generic( sendbuf, recvbuf, count, datatype, op, root, comm,
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comm->c_coll_selected_data->cached_bmtree, segcount );
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}
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/*
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* Linear functions are copied from the BASIC coll module
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* they do not segment the message and are simple implementations
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* but for some small number of nodes and/or small data sizes they
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* are just as fast as tuned/tree based segmenting operations
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* and as such may be selected by the decision functions
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* These are copied into this module due to the way we select modules
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* in V1. i.e. in V2 we will handle this differently and so will not
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* have to duplicate code.
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* GEF Oct05 after asking Jeff.
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*/
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/* copied function (with appropriate renaming) starts here */
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/*
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* reduce_lin_intra
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*
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* Function: - reduction using O(N) algorithm
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* Accepts: - same as MPI_Reduce()
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* Returns: - MPI_SUCCESS or error code
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*/
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int
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ompi_coll_tuned_reduce_intra_basic_linear(void *sbuf, void *rbuf, int count,
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struct ompi_datatype_t *dtype,
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struct ompi_op_t *op,
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int root, struct ompi_communicator_t *comm)
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{
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int i, rank, err, size;
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ptrdiff_t true_lb, true_extent, lb, extent;
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char *free_buffer = NULL;
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char *pml_buffer = NULL;
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char *inplace_temp = NULL;
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char *inbuf;
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/* Initialize */
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rank = ompi_comm_rank(comm);
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size = ompi_comm_size(comm);
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OPAL_OUTPUT((ompi_coll_tuned_stream,"coll:tuned:reduce_intra_basic_linear rank %d", rank));
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/* If not root, send data to the root. */
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if (rank != root) {
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err = MCA_PML_CALL(send(sbuf, count, dtype, root,
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MCA_COLL_BASE_TAG_REDUCE,
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MCA_PML_BASE_SEND_STANDARD, comm));
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return err;
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}
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/* see discussion in ompi_coll_basic_reduce_lin_intra about extent and true extend */
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/* for reducing buffer allocation lengths.... */
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ompi_ddt_get_extent(dtype, &lb, &extent);
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ompi_ddt_get_true_extent(dtype, &true_lb, &true_extent);
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if (MPI_IN_PLACE == sbuf) {
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sbuf = rbuf;
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inplace_temp = (char*)malloc(true_extent + (count - 1) * extent);
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if (NULL == inplace_temp) {
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return OMPI_ERR_OUT_OF_RESOURCE;
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}
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rbuf = inplace_temp - lb;
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}
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if (size > 1) {
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free_buffer = (char*)malloc(true_extent + (count - 1) * extent);
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if (NULL == free_buffer) {
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return OMPI_ERR_OUT_OF_RESOURCE;
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}
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pml_buffer = free_buffer - lb;
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}
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/* Initialize the receive buffer. */
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if (rank == (size - 1)) {
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err = ompi_ddt_copy_content_same_ddt(dtype, count, (char*)rbuf, (char*)sbuf);
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} else {
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err = MCA_PML_CALL(recv(rbuf, count, dtype, size - 1,
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MCA_COLL_BASE_TAG_REDUCE, comm,
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MPI_STATUS_IGNORE));
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}
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if (MPI_SUCCESS != err) {
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if (NULL != free_buffer) {
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free(free_buffer);
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}
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return err;
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}
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/* Loop receiving and calling reduction function (C or Fortran). */
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for (i = size - 2; i >= 0; --i) {
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if (rank == i) {
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inbuf = (char*)sbuf;
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} else {
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err = MCA_PML_CALL(recv(pml_buffer, count, dtype, i,
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MCA_COLL_BASE_TAG_REDUCE, comm,
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MPI_STATUS_IGNORE));
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if (MPI_SUCCESS != err) {
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if (NULL != free_buffer) {
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free(free_buffer);
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}
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return err;
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}
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inbuf = pml_buffer;
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}
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/* Perform the reduction */
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ompi_op_reduce(op, inbuf, rbuf, count, dtype);
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}
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if (NULL != inplace_temp) {
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err = ompi_ddt_copy_content_same_ddt(dtype, count, (char*)sbuf, inplace_temp);
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free(inplace_temp);
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}
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if (NULL != free_buffer) {
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free(free_buffer);
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}
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/* All done */
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return MPI_SUCCESS;
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}
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/* copied function (with appropriate renaming) ends here */
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/**
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* The following are used by dynamic and forced rules
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*
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* publish details of each algorithm and if its forced/fixed/locked in
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* as you add methods/algorithms you must update this and the query/map routines
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*
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* this routine is called by the component only
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* this makes sure that the mca parameters are set to their initial values and perms
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* module does not call this they call the forced_getvalues routine instead
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*/
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int ompi_coll_tuned_reduce_intra_check_forced_init (coll_tuned_force_algorithm_mca_param_indices_t *mca_param_indices)
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{
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int rc, requested_alg, max_alg = 5;
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ompi_coll_tuned_forced_max_algorithms[REDUCE] = max_alg;
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rc = mca_base_param_reg_int (&mca_coll_tuned_component.super.collm_version,
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"reduce_algorithm_count",
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"Number of reduce algorithms available",
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false, true, max_alg, NULL);
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mca_param_indices->algorithm_param_index
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= mca_base_param_reg_int(&mca_coll_tuned_component.super.collm_version,
|
|
"reduce_algorithm",
|
|
"Which reduce algorithm is used. Can be locked down to choice of: 0 ignore, 1 linear, 2 chain, 3 pipeline, 4 binary, 5 binomial",
|
|
false, false, 0, NULL);
|
|
mca_base_param_lookup_int(mca_param_indices->algorithm_param_index, &(requested_alg));
|
|
if( requested_alg > max_alg ) {
|
|
if( 0 == ompi_comm_rank( MPI_COMM_WORLD ) ) {
|
|
opal_output( 0, "Reduce algorithm #%d is not available (range [0..%d]). Switching back to ignore(0)\n",
|
|
requested_alg, max_alg );
|
|
}
|
|
mca_base_param_set_int( mca_param_indices->algorithm_param_index, 0);
|
|
}
|
|
|
|
mca_param_indices->segsize_param_index
|
|
= mca_base_param_reg_int(&mca_coll_tuned_component.super.collm_version,
|
|
"reduce_algorithm_segmentsize",
|
|
"Segment size in bytes used by default for reduce algorithms. Only has meaning if algorithm is forced and supports segmenting. 0 bytes means no segmentation.",
|
|
false, false, 0, NULL);
|
|
|
|
mca_param_indices->tree_fanout_param_index
|
|
= mca_base_param_reg_int(&mca_coll_tuned_component.super.collm_version,
|
|
"reduce_algorithm_tree_fanout",
|
|
"Fanout for n-tree used for reduce algorithms. Only has meaning if algorithm is forced and supports n-tree topo based operation.",
|
|
false, false,
|
|
ompi_coll_tuned_init_tree_fanout, /* get system wide default */
|
|
NULL);
|
|
|
|
mca_param_indices->chain_fanout_param_index
|
|
= mca_base_param_reg_int(&mca_coll_tuned_component.super.collm_version,
|
|
"reduce_algorithm_chain_fanout",
|
|
"Fanout for chains used for reduce algorithms. Only has meaning if algorithm is forced and supports chain topo based operation.",
|
|
false, false,
|
|
ompi_coll_tuned_init_chain_fanout, /* get system wide default */
|
|
NULL);
|
|
return (MPI_SUCCESS);
|
|
}
|
|
|
|
|
|
int ompi_coll_tuned_reduce_intra_do_forced(void *sbuf, void* rbuf, int count,
|
|
struct ompi_datatype_t *dtype,
|
|
struct ompi_op_t *op, int root,
|
|
struct ompi_communicator_t *comm)
|
|
{
|
|
OPAL_OUTPUT((ompi_coll_tuned_stream,"coll:tuned:reduce_intra_do_forced selected algorithm %d",
|
|
comm->c_coll_selected_data->user_forced[REDUCE].algorithm));
|
|
|
|
switch (comm->c_coll_selected_data->user_forced[REDUCE].algorithm) {
|
|
case (0): return ompi_coll_tuned_reduce_intra_dec_fixed (sbuf, rbuf, count, dtype, op, root, comm);
|
|
case (1): return ompi_coll_tuned_reduce_intra_basic_linear (sbuf, rbuf, count, dtype, op, root, comm);
|
|
case (2): return ompi_coll_tuned_reduce_intra_chain (sbuf, rbuf, count, dtype, op, root, comm,
|
|
comm->c_coll_selected_data->user_forced[REDUCE].segsize,
|
|
comm->c_coll_selected_data->user_forced[REDUCE].chain_fanout);
|
|
case (3): return ompi_coll_tuned_reduce_intra_pipeline (sbuf, rbuf, count, dtype, op, root, comm,
|
|
comm->c_coll_selected_data->user_forced[REDUCE].segsize);
|
|
case (4): return ompi_coll_tuned_reduce_intra_binary (sbuf, rbuf, count, dtype, op, root, comm,
|
|
comm->c_coll_selected_data->user_forced[REDUCE].segsize);
|
|
case (5): return ompi_coll_tuned_reduce_intra_binomial (sbuf, rbuf, count, dtype, op, root, comm,
|
|
comm->c_coll_selected_data->user_forced[REDUCE].segsize);
|
|
default:
|
|
OPAL_OUTPUT((ompi_coll_tuned_stream,"coll:tuned:reduce_intra_do_forced attempt to select algorithm %d when only 0-%d is valid?",
|
|
comm->c_coll_selected_data->user_forced[REDUCE].algorithm, ompi_coll_tuned_forced_max_algorithms[REDUCE]));
|
|
return (MPI_ERR_ARG);
|
|
} /* switch */
|
|
}
|
|
|
|
|
|
int ompi_coll_tuned_reduce_intra_do_this(void *sbuf, void* rbuf, int count,
|
|
struct ompi_datatype_t *dtype,
|
|
struct ompi_op_t *op, int root,
|
|
struct ompi_communicator_t *comm,
|
|
int algorithm, int faninout, int segsize)
|
|
{
|
|
OPAL_OUTPUT((ompi_coll_tuned_stream,"coll:tuned:reduce_intra_do_this selected algorithm %d topo faninout %d segsize %d",
|
|
algorithm, faninout, segsize));
|
|
|
|
switch (algorithm) {
|
|
case (0): return ompi_coll_tuned_reduce_intra_dec_fixed (sbuf, rbuf, count, dtype, op, root, comm);
|
|
case (1): return ompi_coll_tuned_reduce_intra_basic_linear (sbuf, rbuf, count, dtype, op, root, comm);
|
|
case (2): return ompi_coll_tuned_reduce_intra_chain (sbuf, rbuf, count, dtype, op, root, comm,
|
|
segsize, faninout);
|
|
case (3): return ompi_coll_tuned_reduce_intra_pipeline (sbuf, rbuf, count, dtype, op, root, comm,
|
|
segsize);
|
|
case (4): return ompi_coll_tuned_reduce_intra_binary (sbuf, rbuf, count, dtype, op, root, comm,
|
|
segsize);
|
|
case (5): return ompi_coll_tuned_reduce_intra_binomial (sbuf, rbuf, count, dtype, op, root, comm,
|
|
segsize);
|
|
default:
|
|
OPAL_OUTPUT((ompi_coll_tuned_stream,"coll:tuned:reduce_intra_do_this attempt to select algorithm %d when only 0-%d is valid?",
|
|
algorithm, ompi_coll_tuned_forced_max_algorithms[REDUCE]));
|
|
return (MPI_ERR_ARG);
|
|
} /* switch */
|
|
}
|
|
|