George Bosilca 5fae72b9aa Add the MPI 2.2 MPI_Dist_graph functionality. ...

This patch reshape the way we deal with topologies completely. Where
our topologies were mainly storage components (they were not capable
of creating the new communicator), the new version is built around a
[possibly] common representation (in mca/topo/topo.h), but the functions
to attach and retrieve the topological information are specific to each
component. As a result the ompi_create_cart and ompi_create_graph functions
become useless and have been removed.

In addition to adding the internal infrastructure to manage the topology
information, it updates the MPI interface, and the debuggers support and
provides all Fortran interfaces.

This commit was SVN r28687.

2013-07-01 12:40:08 +00:00

..

profile

Add the MPI 2.2 MPI_Dist_graph functionality.

2013-07-01 12:40:08 +00:00

abort_f.c

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accumulate_f.c

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add_error_class_f.c

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add_error_code_f.c

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add_error_string_f.c

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address_f.c

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2012-04-18 15:57:29 +00:00

allgather_f.c

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2012-04-18 15:57:29 +00:00

allgatherv_f.c

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2012-04-18 15:57:29 +00:00

alloc_mem_f.c

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2012-04-18 15:57:29 +00:00

allreduce_f.c

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2012-04-18 15:57:29 +00:00

alltoall_f.c

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alltoallv_f.c

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2012-04-18 15:57:29 +00:00

alltoallw_f.c

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2012-04-18 15:57:29 +00:00

attr_delete_f.c

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2012-04-18 15:57:29 +00:00

attr_get_f.c

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2012-04-18 15:57:29 +00:00

attr_put_f.c

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2012-04-18 15:57:29 +00:00

barrier_f.c

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2012-04-18 15:57:29 +00:00

bcast_f.c

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2012-04-18 15:57:29 +00:00

bindings.h

Fix a really outdated comment (it dated back to when all the OMPI

2012-07-10 00:06:00 +00:00

bsend_f.c

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2012-04-18 15:57:29 +00:00

bsend_init_f.c

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buffer_attach_f.c

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buffer_detach_f.c

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2012-04-18 15:57:29 +00:00

cancel_f.c

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2012-04-18 15:57:29 +00:00

cart_coords_f.c

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2012-04-18 15:57:29 +00:00

cart_create_f.c

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cart_get_f.c

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cart_map_f.c

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cart_rank_f.c

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cart_shift_f.c

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cart_sub_f.c

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cartdim_get_f.c

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2012-04-18 15:57:29 +00:00

close_port_f.c

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2012-04-18 15:57:29 +00:00

comm_accept_f.c

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comm_call_errhandler_f.c

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2012-04-18 15:57:29 +00:00

comm_compare_f.c

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2012-04-18 15:57:29 +00:00

comm_connect_f.c

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2012-04-18 15:57:29 +00:00

comm_create_errhandler_f.c

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comm_create_f.c

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2012-04-18 15:57:29 +00:00

comm_create_keyval_f.c

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comm_delete_attr_f.c

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2012-04-18 15:57:29 +00:00

comm_disconnect_f.c

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comm_dup_f.c

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comm_free_f.c

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comm_free_keyval_f.c

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2012-04-18 15:57:29 +00:00

comm_get_attr_f.c

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2012-04-18 15:57:29 +00:00

comm_get_errhandler_f.c

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2012-04-18 15:57:29 +00:00

comm_get_name_f.c

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2012-04-18 15:57:29 +00:00

comm_get_parent_f.c

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comm_group_f.c

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comm_join_f.c

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comm_rank_f.c

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comm_remote_group_f.c

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comm_remote_size_f.c

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comm_set_attr_f.c

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comm_set_errhandler_f.c

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comm_set_name_f.c

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2012-04-18 15:57:29 +00:00

comm_size_f.c

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comm_spawn_f.c

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comm_spawn_multiple_f.c

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comm_split_f.c

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comm_split_type_f.c

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comm_test_inter_f.c

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2012-04-18 15:57:29 +00:00

dims_create_f.c

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2012-04-18 15:57:29 +00:00

dist_graph_create_adjacent_f.c

Add the MPI 2.2 MPI_Dist_graph functionality.

2013-07-01 12:40:08 +00:00

dist_graph_create_f.c

Add the MPI 2.2 MPI_Dist_graph functionality.

2013-07-01 12:40:08 +00:00

dist_graph_neighbors_count_f.c

Add the MPI 2.2 MPI_Dist_graph functionality.

2013-07-01 12:40:08 +00:00

dist_graph_neighbors_f.c

Add the MPI 2.2 MPI_Dist_graph functionality.

2013-07-01 12:40:08 +00:00

errhandler_create_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

errhandler_free_f.c

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2012-04-18 15:57:29 +00:00

errhandler_get_f.c

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2012-04-18 15:57:29 +00:00

errhandler_set_f.c

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2012-04-18 15:57:29 +00:00

error_class_f.c

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2012-04-18 15:57:29 +00:00

error_string_f.c

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2012-04-18 15:57:29 +00:00

exscan_f.c

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2012-04-18 15:57:29 +00:00

f_sync_reg_f.c

Many updates and bug fixes for the Fortran bindings. Sorry these

2012-08-10 21:19:47 +00:00

file_call_errhandler_f.c

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2012-04-18 15:57:29 +00:00

file_close_f.c

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file_create_errhandler_f.c

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file_delete_f.c

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2012-04-18 15:57:29 +00:00

file_get_amode_f.c

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2012-04-18 15:57:29 +00:00

file_get_atomicity_f.c

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2012-04-18 15:57:29 +00:00

file_get_byte_offset_f.c

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file_get_errhandler_f.c

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2012-04-18 15:57:29 +00:00

file_get_group_f.c

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2012-04-18 15:57:29 +00:00

file_get_info_f.c

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2012-04-18 15:57:29 +00:00

file_get_position_f.c

Fix #3094: do the correct cast for the right integer size.

2012-05-15 15:15:33 +00:00

file_get_position_shared_f.c

Oops -- forgot to include file_get_position_shared in r26439.

2012-05-15 19:51:15 +00:00

file_get_size_f.c

Fix #3094: do the correct cast for the right integer size.

2012-05-15 15:15:33 +00:00

file_get_type_extent_f.c

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2012-04-18 15:57:29 +00:00

file_get_view_f.c

Fix #3094: do the correct cast for the right integer size.

2012-05-15 15:15:33 +00:00

file_iread_at_f.c

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file_iread_f.c

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file_iread_shared_f.c

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file_iwrite_at_f.c

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file_iwrite_f.c

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file_iwrite_shared_f.c

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file_open_f.c

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file_preallocate_f.c

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file_read_all_begin_f.c

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file_read_all_end_f.c

Ensure that MPI_Status objects have proper alignment:

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file_read_all_f.c

Ensure that MPI_Status objects have proper alignment:

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file_read_at_all_begin_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

file_read_at_all_end_f.c

Ensure that MPI_Status objects have proper alignment:

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file_read_at_all_f.c

Ensure that MPI_Status objects have proper alignment:

2012-10-04 14:39:51 +00:00

file_read_at_f.c

Ensure that MPI_Status objects have proper alignment:

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file_read_f.c

Ensure that MPI_Status objects have proper alignment:

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file_read_ordered_begin_f.c

== Highlights ==

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file_read_ordered_end_f.c

Ensure that MPI_Status objects have proper alignment:

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file_read_ordered_f.c

Ensure that MPI_Status objects have proper alignment:

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file_read_shared_f.c

Ensure that MPI_Status objects have proper alignment:

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file_seek_f.c

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file_seek_shared_f.c

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2012-04-18 15:57:29 +00:00

file_set_atomicity_f.c

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2012-04-18 15:57:29 +00:00

file_set_errhandler_f.c

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2012-04-18 15:57:29 +00:00

file_set_info_f.c

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2012-04-18 15:57:29 +00:00

file_set_size_f.c

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2012-04-18 15:57:29 +00:00

file_set_view_f.c

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2012-04-18 15:57:29 +00:00

file_sync_f.c

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2012-04-18 15:57:29 +00:00

file_write_all_begin_f.c

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2012-04-18 15:57:29 +00:00

file_write_all_end_f.c

Ensure that MPI_Status objects have proper alignment:

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file_write_all_f.c

Ensure that MPI_Status objects have proper alignment:

2012-10-04 14:39:51 +00:00

file_write_at_all_begin_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

file_write_at_all_end_f.c

Ensure that MPI_Status objects have proper alignment:

2012-10-04 14:39:51 +00:00

file_write_at_all_f.c

Ensure that MPI_Status objects have proper alignment:

2012-10-04 14:39:51 +00:00

file_write_at_f.c

Ensure that MPI_Status objects have proper alignment:

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file_write_f.c

Ensure that MPI_Status objects have proper alignment:

2012-10-04 14:39:51 +00:00

file_write_ordered_begin_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

file_write_ordered_end_f.c

Ensure that MPI_Status objects have proper alignment:

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file_write_ordered_f.c

Ensure that MPI_Status objects have proper alignment:

2012-10-04 14:39:51 +00:00

file_write_shared_f.c

Ensure that MPI_Status objects have proper alignment:

2012-10-04 14:39:51 +00:00

finalize_f.c

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finalized_f.c

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free_mem_f.c

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2012-04-18 15:57:29 +00:00

gather_f.c

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gatherv_f.c

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get_address_f.c

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get_count_f.c

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get_elements_f.c

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get_f.c

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get_library_version_f.c

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2012-04-18 15:57:29 +00:00

get_processor_name_f.c

Ensure to set Fortran ierr properly at the end of

2012-12-13 15:03:48 +00:00

get_version_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

graph_create_f.c

Fix some Fortran typos.

2012-07-02 16:15:44 +00:00

graph_get_f.c

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2012-04-18 15:57:29 +00:00

graph_map_f.c

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2012-04-18 15:57:29 +00:00

graph_neighbors_count_f.c

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2012-04-18 15:57:29 +00:00

graph_neighbors_f.c

Add the MPI 2.2 MPI_Dist_graph functionality.

2013-07-01 12:40:08 +00:00

graphdims_get_f.c

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grequest_complete_f.c

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grequest_start_f.c

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group_compare_f.c

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group_difference_f.c

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group_excl_f.c

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group_free_f.c

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2012-04-18 15:57:29 +00:00

group_incl_f.c

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group_intersection_f.c

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group_range_excl_f.c

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group_range_incl_f.c

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group_rank_f.c

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group_size_f.c

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2012-04-18 15:57:29 +00:00

group_translate_ranks_f.c

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2012-04-18 15:57:29 +00:00

group_union_f.c

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2012-04-18 15:57:29 +00:00

iallgather_f.c

* Initial merge of the non-blocking collectives interface. No implementation of

2012-06-22 20:54:12 +00:00

iallgatherv_f.c

* Initial merge of the non-blocking collectives interface. No implementation of

2012-06-22 20:54:12 +00:00

iallreduce_f.c

* Initial merge of the non-blocking collectives interface. No implementation of

2012-06-22 20:54:12 +00:00

ialltoall_f.c

* Initial merge of the non-blocking collectives interface. No implementation of

2012-06-22 20:54:12 +00:00

ialltoallv_f.c

* Initial merge of the non-blocking collectives interface. No implementation of

2012-06-22 20:54:12 +00:00

ialltoallw_f.c

* Initial merge of the non-blocking collectives interface. No implementation of

2012-06-22 20:54:12 +00:00

ibarrier_f.c

remove unneeded rank

2012-07-19 21:29:18 +00:00

ibcast_f.c

* Initial merge of the non-blocking collectives interface. No implementation of

2012-06-22 20:54:12 +00:00

ibsend_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

iexscan_f.c

* Initial merge of the non-blocking collectives interface. No implementation of

2012-06-22 20:54:12 +00:00

igather_f.c

* Initial merge of the non-blocking collectives interface. No implementation of

2012-06-22 20:54:12 +00:00

igatherv_f.c

* Initial merge of the non-blocking collectives interface. No implementation of

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improbe_f.c

Ensure that MPI_Status objects have proper alignment:

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imrecv_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

info_create_f.c

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info_delete_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

info_dup_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

info_free_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

info_get_f.c

This is an amazingly long-lived bug; AFAICT, this has been around

2012-08-14 23:10:21 +00:00

info_get_nkeys_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

info_get_nthkey_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

info_get_valuelen_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

info_set_f.c

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init_f.c

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init_thread_f.c

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initialized_f.c

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2012-04-18 15:57:29 +00:00

intercomm_create_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

intercomm_merge_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

iprobe_f.c

Ensure that MPI_Status objects have proper alignment:

2012-10-04 14:39:51 +00:00

irecv_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

ireduce_f.c

* Initial merge of the non-blocking collectives interface. No implementation of

2012-06-22 20:54:12 +00:00

ireduce_scatter_block_f.c

Fix some Fortran typos.

2012-07-02 16:15:44 +00:00

ireduce_scatter_f.c

* Initial merge of the non-blocking collectives interface. No implementation of

2012-06-22 20:54:12 +00:00

irsend_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

is_thread_main_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

iscan_f.c

* Initial merge of the non-blocking collectives interface. No implementation of

2012-06-22 20:54:12 +00:00

iscatter_f.c

* Initial merge of the non-blocking collectives interface. No implementation of

2012-06-22 20:54:12 +00:00

iscatterv_f.c

* Initial merge of the non-blocking collectives interface. No implementation of

2012-06-22 20:54:12 +00:00

isend_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

issend_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

keyval_create_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

keyval_free_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

lookup_name_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

Makefile.am

Add the MPI 2.2 MPI_Dist_graph functionality.

2013-07-01 12:40:08 +00:00

mprobe_f.c

Ensure that MPI_Status objects have proper alignment:

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mrecv_f.c

Ensure that MPI_Status objects have proper alignment:

2012-10-04 14:39:51 +00:00

op_commutative_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

op_create_f.c

* Fix some comments to update to the new Fortran binding directory

2012-08-14 23:13:32 +00:00

op_free_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

open_port_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

pack_external_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

pack_external_size_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

pack_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

pack_size_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

pcontrol_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

probe_f.c

Ensure that MPI_Status objects have proper alignment:

2012-10-04 14:39:51 +00:00

prototypes_mpi.h

Add the MPI 2.2 MPI_Dist_graph functionality.

2013-07-01 12:40:08 +00:00

publish_name_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

put_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

query_thread_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

recv_f.c

Ensure that MPI_Status objects have proper alignment:

2012-10-04 14:39:51 +00:00

recv_init_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

reduce_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

reduce_local_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

reduce_scatter_block_f.c

Fix some Fortran typos.

2012-07-02 16:15:44 +00:00

reduce_scatter_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

register_datarep_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

request_free_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

request_get_status_f.c

== Highlights ==

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rsend_f.c

== Highlights ==

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rsend_init_f.c

== Highlights ==

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scan_f.c

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scatter_f.c

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scatterv_f.c

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send_f.c

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send_init_f.c

== Highlights ==

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sendrecv_f.c

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sendrecv_replace_f.c

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ssend_f.c

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ssend_init_f.c

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start_f.c

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startall_f.c

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status_set_cancelled_f.c

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status_set_elements_f.c

== Highlights ==

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status-conversion.h

Ensure that MPI_Status objects have proper alignment:

2012-10-04 14:39:51 +00:00

test_cancelled_f.c

== Highlights ==

2012-04-18 15:57:29 +00:00

test_f.c

* Fix some comments to update to the new Fortran binding directory

2012-08-14 23:13:32 +00:00

testall_f.c

Add optimization (i.e., avoid malloc(0)) in the (count==0) case. Just

2012-08-24 16:12:01 +00:00

testany_f.c

Add optimization (i.e., avoid malloc(0)) in the (count==0) case. Just

2012-08-24 16:12:01 +00:00

testsome_f.c

Add optimization (i.e., avoid malloc(0)) in the (count==0) case. Just

2012-08-24 16:12:01 +00:00

topo_test_f.c

Ensure that MPI_Status objects have proper alignment:

2012-10-04 14:39:51 +00:00

type_commit_f.c

== Highlights ==

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type_contiguous_f.c

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type_create_darray_f.c

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type_create_f90_complex_f.c

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type_create_f90_integer_f.c

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type_create_f90_real_f.c

== Highlights ==

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type_create_hindexed_block_f.c

It is now almost impossible to add a new function to the MPI interface

2012-08-08 13:17:57 +00:00

type_create_hindexed_f.c

== Highlights ==

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type_create_hvector_f.c

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type_create_indexed_block_f.c

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type_create_keyval_f.c

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type_create_resized_f.c

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type_create_struct_f.c

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type_create_subarray_f.c

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type_delete_attr_f.c

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type_dup_f.c

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type_extent_f.c

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type_free_f.c

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type_free_keyval_f.c

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type_get_attr_f.c

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type_get_contents_f.c

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type_get_envelope_f.c

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type_get_extent_f.c

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type_get_name_f.c

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type_get_true_extent_f.c

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type_hindexed_f.c

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type_hvector_f.c

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type_indexed_f.c

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type_lb_f.c

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type_match_size_f.c

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type_set_attr_f.c

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type_set_name_f.c

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type_size_f.c

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type_struct_f.c

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type_ub_f.c

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type_vector_f.c

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unpack_external_f.c

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unpack_f.c

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unpublish_name_f.c

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wait_f.c

== Highlights ==

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waitall_f.c

Add optimization (i.e., avoid malloc(0)) in the (count==0) case. Just

2012-08-24 16:12:01 +00:00

waitany_f.c

Add optimization (i.e., avoid malloc(0)) in the (count==0) case. Just

2012-08-24 16:12:01 +00:00

waitsome_f.c

Add optimization (i.e., avoid malloc(0)) in the (count==0) case. Just

2012-08-24 16:12:01 +00:00

win_call_errhandler_f.c

== Highlights ==

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win_complete_f.c

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win_create_errhandler_f.c

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win_create_f.c

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win_create_keyval_f.c

== Highlights ==

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win_delete_attr_f.c

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win_fence_f.c

== Highlights ==

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win_free_f.c

== Highlights ==

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win_free_keyval_f.c

== Highlights ==

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win_get_attr_f.c

== Highlights ==

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win_get_errhandler_f.c

== Highlights ==

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win_get_group_f.c

== Highlights ==

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win_get_name_f.c

== Highlights ==

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win_lock_f.c

== Highlights ==

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win_post_f.c

== Highlights ==

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win_set_attr_f.c

== Highlights ==

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win_set_errhandler_f.c

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win_set_name_f.c

== Highlights ==

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win_start_f.c

== Highlights ==

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win_test_f.c

== Highlights ==

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win_unlock_f.c

== Highlights ==

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win_wait_f.c

== Highlights ==

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wtick_f.c

== Highlights ==

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wtime_f.c

== Highlights ==

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