6c5532072a
OMPI and a language agnostic part in OPAL. The convertor is completely moved into OPAL. This offers several benefits as described in RFC http://www.open-mpi.org/community/lists/devel/2009/07/6387.php namely: - Fewer basic types (int* and float* types, boolean and wchar - Fixing naming scheme to ompi-nomenclature. - Usability outside of the ompi-layer. - Due to the fixed nature of simple opal types, their information is completely known at compile time and therefore constified - With fewer datatypes (22), the actual sizes of bit-field types may be reduced from 64 to 32 bits, allowing reorganizing the opal_datatype structure, eliminating holes and keeping data required in convertor (upon send/recv) in one cacheline... This has implications to the convertor-datastructure and other parts of the code. - Several performance tests have been run, the netpipe latency does not change with this patch on Linux/x86-64 on the smoky cluster. - Extensive tests have been done to verify correctness (no new regressions) using: 1. mpi_test_suite on linux/x86-64 using clean ompi-trunk and ompi-ddt: a. running both trunk and ompi-ddt resulted in no differences (except for MPI_SHORT_INT and MPI_TYPE_MIX_LB_UB do now run correctly). b. with --enable-memchecker and running under valgrind (one buglet when run with static found in test-suite, commited) 2. ibm testsuite on linux/x86-64 using clean ompi-trunk and ompi-ddt: all passed (except for the dynamic/ tests failed!! as trunk/MTT) 3. compilation and usage of HDF5 tests on Jaguar using PGI and PathScale compilers. 4. compilation and usage on Scicortex. - Please note, that for the heterogeneous case, (-m32 compiled binaries/ompi), neither ompi-trunk, nor ompi-ddt branch would successfully launch. This commit was SVN r21641.
220 строки
7.5 KiB
C
220 строки
7.5 KiB
C
/*
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* Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana
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* University Research and Technology
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* Corporation. All rights reserved.
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* Copyright (c) 2004-2005 The University of Tennessee and The University
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* of Tennessee Research Foundation. All rights
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* reserved.
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* Copyright (c) 2004-2005 High Performance Computing Center Stuttgart,
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* University of Stuttgart. All rights reserved.
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* Copyright (c) 2004-2005 The Regents of the University of California.
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* All rights reserved.
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* $COPYRIGHT$
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*
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* Additional copyrights may follow
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*
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* $HEADER$
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*/
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#include "ompi_config.h"
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#include "coll_basic.h"
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#include "mpi.h"
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#include "ompi/constants.h"
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#include "ompi/datatype/ompi_datatype.h"
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#include "ompi/op/op.h"
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#include "ompi/mca/coll/coll.h"
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#include "ompi/mca/coll/base/coll_tags.h"
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#include "coll_basic.h"
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#include "ompi/mca/pml/pml.h"
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/*
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* allreduce_intra
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*
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* Function: - allreduce using other MPI collectives
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* Accepts: - same as MPI_Allreduce()
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* Returns: - MPI_SUCCESS or error code
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*/
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int
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mca_coll_basic_allreduce_intra(void *sbuf, void *rbuf, int count,
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struct ompi_datatype_t *dtype,
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struct ompi_op_t *op,
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struct ompi_communicator_t *comm,
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mca_coll_base_module_t *module)
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{
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int err;
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/* Reduce to 0 and broadcast. */
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if (MPI_IN_PLACE == sbuf) {
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if (0 == ompi_comm_rank(comm)) {
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err = comm->c_coll.coll_reduce(MPI_IN_PLACE, rbuf, count, dtype, op, 0, comm, comm->c_coll.coll_reduce_module);
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} else {
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err = comm->c_coll.coll_reduce(rbuf, NULL, count, dtype, op, 0, comm, comm->c_coll.coll_reduce_module);
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}
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} else {
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err = comm->c_coll.coll_reduce(sbuf, rbuf, count, dtype, op, 0, comm, comm->c_coll.coll_reduce_module);
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}
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if (MPI_SUCCESS != err) {
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return err;
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}
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return comm->c_coll.coll_bcast(rbuf, count, dtype, 0, comm, comm->c_coll.coll_bcast_module);
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}
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/*
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* allreduce_inter
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*
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* Function: - allreduce using other MPI collectives
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* Accepts: - same as MPI_Allreduce()
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* Returns: - MPI_SUCCESS or error code
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*/
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int
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mca_coll_basic_allreduce_inter(void *sbuf, void *rbuf, int count,
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struct ompi_datatype_t *dtype,
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struct ompi_op_t *op,
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struct ompi_communicator_t *comm,
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mca_coll_base_module_t *module)
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{
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int err, i, rank, root = 0, rsize;
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ptrdiff_t lb, extent;
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char *tmpbuf = NULL, *pml_buffer = NULL;
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ompi_request_t *req[2];
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mca_coll_basic_module_t *basic_module = (mca_coll_basic_module_t*) module;
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ompi_request_t **reqs = basic_module->mccb_reqs;
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rank = ompi_comm_rank(comm);
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rsize = ompi_comm_remote_size(comm);
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/* determine result of the remote group, you cannot
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* use coll_reduce for inter-communicators, since than
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* you would need to determine an order between the
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* two groups (e.g. which group is providing the data
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* and which one enters coll_reduce with providing
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* MPI_PROC_NULL as root argument etc.) Here,
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* we execute the data exchange for both groups
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* simultaniously. */
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/*****************************************************************/
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if (rank == root) {
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err = ompi_datatype_get_extent(dtype, &lb, &extent);
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if (OMPI_SUCCESS != err) {
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return OMPI_ERROR;
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}
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tmpbuf = (char *) malloc(count * extent);
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if (NULL == tmpbuf) {
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return OMPI_ERR_OUT_OF_RESOURCE;
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}
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pml_buffer = tmpbuf - lb;
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/* Do a send-recv between the two root procs. to avoid deadlock */
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err = MCA_PML_CALL(irecv(rbuf, count, dtype, 0,
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MCA_COLL_BASE_TAG_ALLREDUCE, comm,
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&(req[0])));
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if (OMPI_SUCCESS != err) {
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goto exit;
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}
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err = MCA_PML_CALL(isend(sbuf, count, dtype, 0,
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MCA_COLL_BASE_TAG_ALLREDUCE,
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MCA_PML_BASE_SEND_STANDARD,
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comm, &(req[1])));
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if (OMPI_SUCCESS != err) {
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goto exit;
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}
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err = ompi_request_wait_all(2, req, MPI_STATUSES_IGNORE);
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if (OMPI_SUCCESS != err) {
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goto exit;
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}
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/* Loop receiving and calling reduction function (C or Fortran). */
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for (i = 1; i < rsize; i++) {
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err = MCA_PML_CALL(recv(pml_buffer, count, dtype, i,
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MCA_COLL_BASE_TAG_ALLREDUCE, comm,
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MPI_STATUS_IGNORE));
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if (MPI_SUCCESS != err) {
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goto exit;
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}
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/* Perform the reduction */
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ompi_op_reduce(op, pml_buffer, rbuf, count, dtype);
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}
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} else {
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/* If not root, send data to the root. */
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err = MCA_PML_CALL(send(sbuf, count, dtype, root,
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MCA_COLL_BASE_TAG_ALLREDUCE,
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MCA_PML_BASE_SEND_STANDARD, comm));
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if (OMPI_SUCCESS != err) {
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goto exit;
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}
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}
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/* now we have on one process the result of the remote group. To distribute
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* the data to all processes in the local group, we exchange the data between
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* the two root processes. They then send it to every other process in the
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* remote group. */
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/***************************************************************************/
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if (rank == root) {
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/* sendrecv between the two roots */
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err = MCA_PML_CALL(irecv(pml_buffer, count, dtype, 0,
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MCA_COLL_BASE_TAG_ALLREDUCE,
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comm, &(req[1])));
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if (OMPI_SUCCESS != err) {
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goto exit;
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}
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err = MCA_PML_CALL(isend(rbuf, count, dtype, 0,
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MCA_COLL_BASE_TAG_ALLREDUCE,
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MCA_PML_BASE_SEND_STANDARD, comm,
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&(req[0])));
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if (OMPI_SUCCESS != err) {
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goto exit;
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}
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err = ompi_request_wait_all(2, req, MPI_STATUSES_IGNORE);
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if (OMPI_SUCCESS != err) {
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goto exit;
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}
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/* distribute the data to other processes in remote group.
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* Note that we start from 1 (not from zero), since zero
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* has already the correct data AND we avoid a potential
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* deadlock here.
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*/
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if (rsize > 1) {
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for (i = 1; i < rsize; i++) {
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err = MCA_PML_CALL(isend(pml_buffer, count, dtype, i,
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MCA_COLL_BASE_TAG_ALLREDUCE,
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MCA_PML_BASE_SEND_STANDARD, comm,
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&reqs[i - 1]));
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if (OMPI_SUCCESS != err) {
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goto exit;
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}
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}
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err =
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ompi_request_wait_all(rsize - 1, reqs,
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MPI_STATUSES_IGNORE);
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if (OMPI_SUCCESS != err) {
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goto exit;
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}
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}
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} else {
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err = MCA_PML_CALL(recv(rbuf, count, dtype, root,
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MCA_COLL_BASE_TAG_ALLREDUCE,
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comm, MPI_STATUS_IGNORE));
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}
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exit:
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if (NULL != tmpbuf) {
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free(tmpbuf);
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}
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return err;
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}
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