6b22641669
I know it does not make much sense but one can play around with the performance. Numbers are available at http://www.unixer.de/research/nbcoll/perf/. This is the first step towards collv2. Next step includes the addition of non-blocking functions to the MPI-Layer and the collv1 interface. It implements all MPI-1 collective algorithms in a non-blocking manner. However, the collv1 interface does not allow non-blocking collectives so that all collectives are used blocking by the ompi-glue layer. I wanted to add LibNBC as a separate subdirectory, but I could not convince the buildsystem (and had not the time). So the component looks pretty messy. It would be great if somebody could explain me how to move all nbc*{c,h}, and {hb,dict}*{c,h} to a seperate subdirectory. It's .ompi_ignored because I did not test it exhaustively yet. This commit was SVN r11401.
121 строка
4.4 KiB
C
121 строка
4.4 KiB
C
#include "nbc.h"
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#ifdef NBC_CACHE_SCHEDULE
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/* tree comparison function for schedule cache */
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int NBC_Scan_args_compare(NBC_Scan_args *a, NBC_Scan_args *b, void *param) {
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if( (a->sendbuf == b->sendbuf) &&
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(a->recvbuf == b->recvbuf) &&
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(a->count == b->count) &&
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(a->datatype == b->datatype) &&
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(a->op == b->op) ) {
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return 0;
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}
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if( a->sendbuf < b->sendbuf ) {
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return -1;
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}
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return +1;
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}
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#endif
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/* linear iscan
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* working principle:
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* 1. each node (but node 0) receives from left neigbor
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* 2. performs op
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* 3. all but rank p-1 do sends to it's right neigbor and exits
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*
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*/
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int NBC_Iscan(void* sendbuf, void* recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, NBC_Handle* handle) {
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int rank, p, res;
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MPI_Aint ext;
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NBC_Schedule *schedule;
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#ifdef NBC_CACHE_SCHEDULE
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NBC_Scan_args *args, *found, search;
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#endif
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char inplace;
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NBC_IN_PLACE(sendbuf, recvbuf, inplace);
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res = NBC_Init_handle(handle, comm);
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if(res != NBC_OK) { printf("Error in NBC_Init_handle(%i)\n", res); return res; }
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res = MPI_Comm_rank(comm, &rank);
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if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_rank() (%i)\n", res); return res; }
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res = MPI_Comm_size(comm, &p);
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if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_size() (%i)\n", res); return res; }
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res = MPI_Type_extent(datatype, &ext);
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if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Type_extent() (%i)\n", res); return res; }
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handle->tmpbuf = malloc(ext*count);
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if(handle->tmpbuf == NULL) { printf("Error in malloc()\n"); return NBC_OOR; }
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if((rank == 0) && !inplace) {
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/* copy data to receivebuf */
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res = NBC_Copy(sendbuf, count, datatype, recvbuf, count, datatype, comm);
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if (NBC_OK != res) { printf("Error in NBC_Copy() (%i)\n", res); return res; }
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}
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#ifdef NBC_CACHE_SCHEDULE
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/* search schedule in communicator specific tree */
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search.sendbuf=sendbuf;
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search.recvbuf=recvbuf;
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search.count=count;
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search.datatype=datatype;
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search.op=op;
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found = hb_tree_search(handle->comminfo->NBC_Dict[NBC_SCAN], &search);
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if(found == NULL) {
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#endif
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schedule = malloc(sizeof(NBC_Schedule));
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if (NULL == schedule) { printf("Error in malloc()\n"); return res; }
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res = NBC_Sched_create(schedule);
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if(res != NBC_OK) { printf("Error in NBC_Sched_create (%i)\n", res); return res; }
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if(rank != 0) {
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res = NBC_Sched_recv(0, true, count, datatype, rank-1, schedule);
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if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_recv() (%i)\n", res); return res; }
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/* we have to wait until we have the data */
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res = NBC_Sched_barrier(schedule);
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if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_barrier() (%i)\n", res); return res; }
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/* perform the reduce in my local buffer */
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res = NBC_Sched_op(recvbuf, false, sendbuf, false, 0, true, count, datatype, op, schedule);
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if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_op() (%i)\n", res); return res; }
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/* this cannot be done until handle->tmpbuf is unused :-( */
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res = NBC_Sched_barrier(schedule);
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if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_barrier() (%i)\n", res); return res; }
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}
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if(rank != p-1) {
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res = NBC_Sched_send(recvbuf, false, count, datatype, rank+1, schedule);
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if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_send() (%i)\n", res); return res; }
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}
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res = NBC_Sched_commit(schedule);
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if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_commit() (%i)\n", res); return res; }
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#ifdef NBC_CACHE_SCHEDULE
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/* save schedule to tree */
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args = malloc(sizeof(NBC_Alltoall_args));
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args->sendbuf=sendbuf;
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args->recvbuf=recvbuf;
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args->count=count;
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args->datatype=datatype;
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args->op=op;
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args->schedule=schedule;
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res = hb_tree_insert (handle->comminfo->NBC_Dict[NBC_SCAN], args, args, 0);
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if(res != 0) printf("error in dict_insert() (%i)\n", res);
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/* increase number of elements for A2A */
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if(++handle->comminfo->NBC_Dict_size[NBC_SCAN] > SCHED_DICT_UPPER) {
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NBC_SchedCache_dictwipe(handle->comminfo->NBC_Dict[NBC_SCAN], &handle->comminfo->NBC_Dict_size[NBC_SCAN]);
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}
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} else {
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/* found schedule */
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schedule=found->schedule;
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}
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#endif
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res = NBC_Start(handle, schedule);
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if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Start() (%i)\n", res); return res; }
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/* tmpbuf is freed with the handle */
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return NBC_OK;
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}
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